View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16355_low_5 (Length: 424)
Name: NF16355_low_5
Description: NF16355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16355_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 8 - 406
Target Start/End: Complemental strand, 43357527 - 43357129
Alignment:
| Q |
8 |
agctttggaggaatcactttctctcccaatatattccacaactcttgtctgtattccaagtccagagacacatctctttcatgatacattactcttaaac |
107 |
Q |
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| T |
43357527 |
agctttggaggaatcactttctctcccaatatattccacaactcttgtctgtattccaagtccagagacacatctctttcatgatacattactcttaaac |
43357428 |
T |
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| Q |
108 |
ttctcaacaagaaatggattgtgttgcaatcttgaaatgttttccttattcctctcaaacttgttgtgtaaagaatgattgaattgcttcctcctggtgg |
207 |
Q |
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| T |
43357427 |
ttctcaacaagaaatggattgtgttgcaatcttgaaatgttttccttattcctctcaaacttgttgtgtaaagaatgattgaattgcttcctcctggtgg |
43357328 |
T |
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| Q |
208 |
acacttttcttccaaatctttaagtgatagataccctttgatgcatgctacttgttttgttgtagctaatttgaaattgaattcttgtaattcctcaaaa |
307 |
Q |
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| T |
43357327 |
acacttttcttcaaaatctttaagtgatggataccctttgatgcatgctacttgttttgttgtagctaatttgaaattgaattcttgtaattcctcaaaa |
43357228 |
T |
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| Q |
308 |
tgatgtatcttatcatcatcatcgttctcacttcggtcaaggctaaactcgagctcagtaaggttatttactgttccagaatgggctgaggtccacctc |
406 |
Q |
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| T |
43357227 |
tgatgtatcttatcatcatcatcgttctcacttcggtcaaggctaaactcgagctcagtaaggttatttactgttccggaatgggctgaggtccacctc |
43357129 |
T |
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