View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16361_low_8 (Length: 330)
Name: NF16361_low_8
Description: NF16361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16361_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 44112209 - 44112503
Alignment:
| Q |
15 |
atgaatcatcaaagagaagatacaaatatttacacctgcagaaagcacatgatcactaatcagagaaaatttaatgttctgtaatgatatgagtgaggat |
114 |
Q |
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| T |
44112209 |
atgaatcatcaaagagaagatacaaatatttacacctgcagaaagcacatgatcactaatcttagaaaatttaatgttctgtaatgatatgagtgaggat |
44112308 |
T |
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| Q |
115 |
ttccannnnnnnnnnnnnnnncttaaatgaaagaggaaaggcaaaaagatcttacgtttcagcaagnnnnnnnctatgttgatgatcttctaactgcata |
214 |
Q |
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| T |
44112309 |
ttccattttttatttttatttcttaaatgaaagaggaaaggcaaaaagatcttacgtttcagcaagaaaaaaactatgttgatgatcttctaactgcata |
44112408 |
T |
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| Q |
215 |
gttgtcacatccttgatgcttgcaaacccaccttctactcttgtgtgtaaattaagggaattgactattaattcgccaacttcaatataccatgg |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44112409 |
gttgtcacatccttgatgcttgcaaacccaccttctactcttgtgtgtaaattaagggaattgactattaattcgccaacttcaatataccatgg |
44112503 |
T |
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