View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16363_high_13 (Length: 224)
Name: NF16363_high_13
Description: NF16363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16363_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 16054359 - 16054170
Alignment:
| Q |
17 |
tacttataggctaagtcccagaaaaattcattacacctactccaaatccaattgatt-cacttattagtcacaagtccttactctagcttaattgaggat |
115 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |
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| T |
16054359 |
tacttataggctaagtcccagaaaaattcattacacctactccaaatccaattgatttcacttattagtcacaagtcctcactctaatttaattgaggat |
16054260 |
T |
|
| Q |
116 |
aatttgatttaataatcatgtacaatttttaagtgcttcattcttttatttcttggacaatacaattgagaggaatagagagacaaaaag |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
16054259 |
aatttgatttaataatcatgtacaatttttaagtgcttcattcttttatttcttggacaatacaattgaaaggaatagagagacaaaaag |
16054170 |
T |
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