View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16363_low_14 (Length: 265)

Name: NF16363_low_14
Description: NF16363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16363_low_14
NF16363_low_14
[»] chr6 (26 HSPs)
chr6 (16-250)||(9365705-9365937)
chr6 (188-245)||(19311830-19311887)
chr6 (183-248)||(26529511-26529576)
chr6 (183-248)||(10171263-10171329)
chr6 (188-248)||(33436277-33436337)
chr6 (183-234)||(8488471-8488522)
chr6 (183-248)||(10171964-10172029)
chr6 (180-248)||(19323762-19323831)
chr6 (178-226)||(19322993-19323041)
chr6 (178-232)||(5861890-5861944)
chr6 (181-235)||(9441238-9441292)
chr6 (183-248)||(12344881-12344947)
chr6 (183-248)||(26528810-26528876)
chr6 (180-248)||(18227719-18227787)
chr6 (184-248)||(19310988-19311053)
chr6 (190-248)||(20833972-20834030)
chr6 (189-238)||(8489284-8489333)
chr6 (188-248)||(33435327-33435388)
chr6 (183-215)||(11434455-11434487)
chr6 (181-248)||(25060803-25060871)
chr6 (190-248)||(505524-505583)
chr6 (190-245)||(1366959-1367014)
chr6 (183-226)||(3623185-3623228)
chr6 (183-248)||(21133225-21133291)
chr6 (181-226)||(9441976-9442021)
chr6 (190-226)||(9442066-9442102)
[»] chr7 (61 HSPs)
chr7 (16-248)||(18977606-18977833)
chr7 (115-248)||(37706416-37706544)
chr7 (181-248)||(7668470-7668537)
chr7 (178-248)||(25342485-25342555)
chr7 (180-247)||(46428175-46428243)
chr7 (178-248)||(30660581-30660651)
chr7 (183-248)||(37949593-37949658)
chr7 (178-226)||(25343313-25343361)
chr7 (183-238)||(26636101-26636156)
chr7 (178-248)||(37950461-37950532)
chr7 (178-244)||(25343233-25343299)
chr7 (183-248)||(30661454-30661520)
chr7 (183-248)||(19067625-19067690)
chr7 (183-248)||(21496982-21497047)
chr7 (185-238)||(25599020-25599073)
chr7 (184-248)||(45161956-45162021)
chr7 (185-248)||(24719323-24719386)
chr7 (183-238)||(26636859-26636914)
chr7 (178-248)||(27948433-27948504)
chr7 (190-248)||(45099899-45099958)
chr7 (181-248)||(46428814-46428881)
chr7 (183-248)||(3772525-3772591)
chr7 (188-234)||(47719708-47719754)
chr7 (188-248)||(13785597-13785658)
chr7 (180-248)||(16664121-16664190)
chr7 (180-248)||(17638481-17638550)
chr7 (181-226)||(24389613-24389658)
chr7 (185-248)||(3903340-3903404)
chr7 (189-248)||(45099126-45099185)
chr7 (183-248)||(19068394-19068460)
chr7 (188-226)||(43065120-43065158)
chr7 (181-226)||(1417618-1417663)
chr7 (183-248)||(3029197-3029262)
chr7 (188-233)||(24453730-24453775)
chr7 (181-226)||(38225972-38226017)
chr7 (183-223)||(3027987-3028027)
chr7 (181-248)||(37395496-37395564)
chr7 (183-226)||(40273570-40273613)
chr7 (189-248)||(48718196-48718255)
chr7 (189-246)||(15305245-15305303)
chr7 (181-215)||(23889867-23889901)
chr7 (188-234)||(23901098-23901144)
chr7 (181-215)||(23902062-23902096)
chr7 (188-248)||(3688371-3688432)
chr7 (181-226)||(14686141-14686186)
chr7 (189-226)||(31278159-31278196)
chr7 (186-238)||(25599821-25599873)
chr7 (178-226)||(42421044-42421092)
chr7 (181-212)||(18977033-18977064)
chr7 (185-216)||(24581063-24581094)
chr7 (190-248)||(36378799-36378858)
chr7 (185-248)||(45931218-45931281)
chr7 (181-228)||(48670924-48670971)
chr7 (188-226)||(14305100-14305138)
chr7 (190-244)||(23901150-23901204)
chr7 (183-217)||(31954292-31954326)
chr7 (190-223)||(31277436-31277469)
chr7 (188-217)||(47718924-47718953)
chr7 (180-216)||(7669396-7669432)
chr7 (186-226)||(8376790-8376829)
chr7 (189-248)||(38225287-38225347)
[»] chr2 (54 HSPs)
chr2 (16-219)||(24934433-24934631)
chr2 (178-248)||(1296368-1296438)
chr2 (183-248)||(11750246-11750311)
chr2 (178-248)||(1297116-1297187)
chr2 (178-246)||(9276323-9276392)
chr2 (178-226)||(9275597-9275645)
chr2 (183-248)||(8542546-8542612)
chr2 (183-248)||(29719434-29719500)
chr2 (180-248)||(6584222-6584291)
chr2 (184-248)||(23343768-23343832)
chr2 (189-248)||(18821235-18821294)
chr2 (181-248)||(22301866-22301933)
chr2 (183-238)||(22560566-22560621)
chr2 (181-248)||(36237620-36237687)
chr2 (178-248)||(38361055-38361126)
chr2 (178-248)||(15774191-15774261)
chr2 (186-248)||(24754995-24755057)
chr2 (188-234)||(29513150-29513196)
chr2 (181-226)||(11007242-11007287)
chr2 (183-248)||(42182613-42182678)
chr2 (185-238)||(42459050-42459103)
chr2 (181-248)||(9540319-9540387)
chr2 (181-248)||(12725611-12725679)
chr2 (181-248)||(24121286-24121354)
chr2 (188-226)||(16692977-16693015)
chr2 (180-226)||(29559415-29559461)
chr2 (189-238)||(18820431-18820480)
chr2 (178-245)||(12724733-12724800)
chr2 (183-226)||(18174668-18174711)
chr2 (181-248)||(24933825-24933892)
chr2 (189-228)||(40252031-40252070)
chr2 (188-226)||(15902885-15902923)
chr2 (183-248)||(23856624-23856689)
chr2 (181-226)||(26752719-26752764)
chr2 (188-233)||(36238733-36238778)
chr2 (188-248)||(8541740-8541800)
chr2 (189-248)||(11751073-11751133)
chr2 (189-248)||(22301182-22301242)
chr2 (189-248)||(23857028-23857088)
chr2 (190-226)||(27177923-27177959)
chr2 (185-248)||(29512359-29512423)
chr2 (189-237)||(34812860-34812908)
chr2 (184-223)||(8669195-8669234)
chr2 (188-247)||(9541037-9541096)
chr2 (183-226)||(18174110-18174153)
chr2 (183-238)||(19918720-19918775)
chr2 (190-248)||(20632915-20632973)
chr2 (183-217)||(22559878-22559912)
chr2 (183-248)||(26587136-26587202)
chr2 (189-226)||(27178649-27178686)
chr2 (181-248)||(15902108-15902176)
chr2 (190-226)||(20432373-20432409)
chr2 (190-226)||(26588249-26588285)
chr2 (190-226)||(26589022-26589058)
[»] chr4 (70 HSPs)
chr4 (183-248)||(30573708-30573773)
chr4 (183-248)||(20774179-20774245)
chr4 (183-248)||(47688478-47688543)
chr4 (183-248)||(53147860-53147925)
chr4 (178-233)||(16903637-16903692)
chr4 (180-226)||(47785795-47785841)
chr4 (180-236)||(7842525-7842581)
chr4 (193-248)||(16903677-16903733)
chr4 (183-238)||(24158819-24158874)
chr4 (178-248)||(26147026-26147097)
chr4 (183-238)||(53148610-53148665)
chr4 (180-227)||(53733727-53733774)
chr4 (183-248)||(8248519-8248585)
chr4 (183-248)||(8266184-8266250)
chr4 (178-248)||(11939435-11939505)
chr4 (183-248)||(53732423-53732489)
chr4 (190-248)||(53772796-53772854)
chr4 (180-249)||(1465308-1465377)
chr4 (181-226)||(19080396-19080441)
chr4 (189-248)||(31329722-31329782)
chr4 (188-248)||(55000676-55000736)
chr4 (188-248)||(55976959-55977019)
chr4 (185-248)||(599302-599365)
chr4 (186-248)||(7841532-7841595)
chr4 (183-238)||(24374788-24374843)
chr4 (180-235)||(40347556-40347611)
chr4 (189-248)||(44469481-44469540)
chr4 (181-250)||(2446158-2446228)
chr4 (188-234)||(24551927-24551973)
chr4 (188-226)||(55976177-55976215)
chr4 (178-223)||(11938725-11938770)
chr4 (181-226)||(43146645-43146690)
chr4 (189-238)||(44792641-44792690)
chr4 (189-226)||(52871309-52871346)
chr4 (188-248)||(53773590-53773651)
chr4 (178-226)||(1866354-1866402)
chr4 (190-226)||(2444383-2444419)
chr4 (183-219)||(5046002-5046038)
chr4 (182-238)||(9365168-9365224)
chr4 (178-226)||(9365810-9365858)
chr4 (190-226)||(19550297-19550333)
chr4 (181-248)||(40495083-40495151)
chr4 (183-235)||(56262480-56262532)
chr4 (183-238)||(8247695-8247750)
chr4 (189-248)||(44791713-44791772)
chr4 (183-226)||(55001439-55001482)
chr4 (190-248)||(5590083-5590140)
chr4 (190-248)||(48128230-48128287)
chr4 (189-226)||(3654520-3654557)
chr4 (189-234)||(24551698-24551743)
chr4 (189-226)||(42882686-42882723)
chr4 (183-247)||(47687898-47687963)
chr4 (183-228)||(56263071-56263116)
chr4 (178-246)||(1867784-1867852)
chr4 (188-248)||(5046486-5046546)
chr4 (178-214)||(16902903-16902939)
chr4 (189-221)||(32088835-32088867)
chr4 (183-226)||(8265372-8265415)
chr4 (183-226)||(12920273-12920316)
chr4 (183-226)||(26159620-26159663)
chr4 (189-248)||(46168127-46168186)
chr4 (180-226)||(142520-142566)
chr4 (195-248)||(12368666-12368720)
chr4 (184-217)||(7841811-7841844)
chr4 (189-226)||(12919596-12919633)
chr4 (178-207)||(26279201-26279230)
chr4 (189-226)||(42880919-42880956)
chr4 (183-216)||(43146692-43146725)
chr4 (190-219)||(50184446-50184475)
chr4 (188-232)||(37273155-37273199)
[»] chr3 (58 HSPs)
chr3 (183-248)||(41458022-41458087)
chr3 (183-248)||(48765069-48765134)
chr3 (181-248)||(55373703-55373770)
chr3 (181-248)||(37988215-37988283)
chr3 (185-248)||(264455-264518)
chr3 (181-244)||(46150726-46150789)
chr3 (183-248)||(48648191-48648257)
chr3 (183-248)||(48764465-48764531)
chr3 (185-245)||(265099-265159)
chr3 (178-237)||(37520555-37520614)
chr3 (180-226)||(31974662-31974708)
chr3 (183-237)||(48649172-48649226)
chr3 (188-248)||(21727533-21727594)
chr3 (181-238)||(45081400-45081457)
chr3 (183-248)||(51827493-51827558)
chr3 (186-238)||(14871152-14871204)
chr3 (188-248)||(17603157-17603217)
chr3 (183-231)||(17605712-17605760)
chr3 (189-248)||(27082764-27082824)
chr3 (178-226)||(48413330-48413378)
chr3 (183-226)||(981678-981721)
chr3 (183-226)||(13477777-13477820)
chr3 (189-248)||(20213536-20213595)
chr3 (181-244)||(44699817-44699880)
chr3 (188-234)||(17603965-17604011)
chr3 (190-248)||(40872814-40872872)
chr3 (188-233)||(46149633-46149678)
chr3 (189-248)||(13477045-13477105)
chr3 (189-248)||(20212968-20213028)
chr3 (185-248)||(31115600-31115664)
chr3 (183-235)||(48507031-48507083)
chr3 (183-248)||(31114933-31114995)
chr3 (189-248)||(33277509-33277568)
chr3 (183-238)||(52266452-52266507)
chr3 (188-234)||(11654033-11654079)
chr3 (183-217)||(29856682-29856716)
chr3 (183-217)||(44699881-44699915)
chr3 (182-248)||(52281755-52281821)
chr3 (178-219)||(23706797-23706838)
chr3 (178-219)||(23725253-23725294)
chr3 (178-219)||(23743709-23743750)
chr3 (181-226)||(29856034-29856079)
chr3 (188-228)||(6974747-6974787)
chr3 (181-248)||(22925429-22925497)
chr3 (186-226)||(29856063-29856103)
chr3 (190-238)||(30222104-30222152)
chr3 (190-226)||(37987244-37987280)
chr3 (190-226)||(52282418-52282454)
chr3 (189-248)||(10847914-10847973)
chr3 (189-228)||(11652302-11652341)
chr3 (183-226)||(51826548-51826591)
chr3 (183-248)||(41474638-41474704)
chr3 (178-208)||(45393964-45393994)
chr3 (183-217)||(48506457-48506491)
chr3 (188-226)||(51469283-51469321)
chr3 (183-248)||(13349404-13349469)
chr3 (189-226)||(54458670-54458707)
chr3 (190-238)||(52605489-52605537)
[»] chr5 (43 HSPs)
chr5 (184-248)||(29046017-29046081)
chr5 (183-248)||(235579-235645)
chr5 (181-233)||(10554550-10554602)
chr5 (181-248)||(4084868-4084935)
chr5 (181-248)||(29087913-29087980)
chr5 (190-248)||(234689-234747)
chr5 (183-248)||(236927-236993)
chr5 (181-235)||(6476787-6476841)
chr5 (190-248)||(14478909-14478967)
chr5 (183-248)||(19128757-19128823)
chr5 (183-248)||(28705877-28705943)
chr5 (181-248)||(27364483-27364551)
chr5 (190-248)||(237826-237885)
chr5 (190-248)||(19359691-19359750)
chr5 (188-234)||(1281838-1281884)
chr5 (182-247)||(28705153-28705219)
chr5 (188-233)||(1283503-1283548)
chr5 (188-226)||(7632105-7632143)
chr5 (183-248)||(17071211-17071277)
chr5 (183-248)||(34600248-34600314)
chr5 (181-226)||(1554079-1554124)
chr5 (183-248)||(17071792-17071857)
chr5 (187-248)||(22212981-22213042)
chr5 (183-248)||(33471087-33471152)
chr5 (181-226)||(34709033-34709078)
chr5 (188-248)||(2313935-2313995)
chr5 (193-248)||(10554509-10554565)
chr5 (190-238)||(19360481-19360529)
chr5 (189-248)||(25858197-25858257)
chr5 (183-226)||(38056804-38056847)
chr5 (181-223)||(27363770-27363812)
chr5 (193-226)||(1283533-1283566)
chr5 (188-225)||(9407261-9407298)
chr5 (188-248)||(22799763-22799824)
chr5 (181-226)||(36038705-36038750)
chr5 (183-226)||(20854903-20854946)
chr5 (188-219)||(22798918-22798949)
chr5 (183-226)||(34600829-34600872)
chr5 (189-248)||(38057599-38057658)
chr5 (181-248)||(43510220-43510287)
chr5 (188-217)||(1281948-1281977)
chr5 (181-238)||(13306265-13306322)
chr5 (183-216)||(38056122-38056155)
[»] chr8 (39 HSPs)
chr8 (178-248)||(38576295-38576366)
chr8 (181-248)||(41974628-41974696)
chr8 (183-248)||(31642085-31642151)
chr8 (180-248)||(37024995-37025062)
chr8 (185-248)||(8304331-8304394)
chr8 (178-248)||(8996967-8997038)
chr8 (183-238)||(31641510-31641565)
chr8 (178-248)||(37064805-37064875)
chr8 (188-248)||(3165125-3165186)
chr8 (191-248)||(37732815-37732872)
chr8 (189-248)||(9197824-9197883)
chr8 (183-226)||(31602027-31602070)
chr8 (188-234)||(11686229-11686275)
chr8 (188-226)||(32414527-32414565)
chr8 (189-238)||(39778917-39778966)
chr8 (189-238)||(39779845-39779894)
chr8 (190-238)||(8373698-8373746)
chr8 (189-248)||(9197083-9197143)
chr8 (188-228)||(28929854-28929894)
chr8 (189-248)||(17725658-17725717)
chr8 (183-226)||(26654376-26654419)
chr8 (188-238)||(22320373-22320423)
chr8 (190-235)||(8372915-8372960)
chr8 (189-238)||(26652292-26652341)
chr8 (181-226)||(27441477-27441522)
chr8 (183-219)||(8298265-8298301)
chr8 (189-248)||(27442145-27442205)
chr8 (188-248)||(39860098-39860161)
chr8 (183-226)||(11686962-11687005)
chr8 (183-226)||(38628261-38628304)
chr8 (183-248)||(45918-45984)
chr8 (190-224)||(3043970-3044004)
chr8 (180-248)||(3417345-3417414)
chr8 (189-226)||(14825654-14825691)
chr8 (189-226)||(17724776-17724813)
chr8 (189-238)||(32979828-32979877)
chr8 (184-217)||(37733599-37733632)
chr8 (190-238)||(15198295-15198343)
chr8 (181-248)||(39860870-39860938)
[»] chr1 (62 HSPs)
chr1 (183-248)||(25468497-25468563)
chr1 (183-248)||(25469085-25469150)
chr1 (189-247)||(19172580-19172639)
chr1 (181-248)||(30932792-30932859)
chr1 (178-248)||(49680798-49680869)
chr1 (183-248)||(28181521-28181586)
chr1 (181-248)||(8987777-8987845)
chr1 (181-248)||(11704805-11704873)
chr1 (183-235)||(34309229-34309281)
chr1 (180-248)||(46909358-46909426)
chr1 (183-238)||(13263515-13263570)
chr1 (183-238)||(30663356-30663411)
chr1 (183-238)||(30663975-30664030)
chr1 (183-248)||(7406232-7406298)
chr1 (190-248)||(36689071-36689129)
chr1 (190-248)||(36705171-36705229)
chr1 (188-234)||(47967864-47967910)
chr1 (185-226)||(4433848-4433889)
chr1 (189-234)||(24991972-24992017)
chr1 (187-248)||(36389763-36389824)
chr1 (183-232)||(46812186-46812235)
chr1 (181-248)||(7559196-7559264)
chr1 (183-226)||(10121551-10121594)
chr1 (189-248)||(12761501-12761560)
chr1 (183-226)||(13262843-13262886)
chr1 (193-248)||(26118661-26118716)
chr1 (189-248)||(37852511-37852570)
chr1 (183-225)||(8988547-8988589)
chr1 (183-248)||(27256711-27256777)
chr1 (180-226)||(30931898-30931944)
chr1 (185-226)||(4439207-4439248)
chr1 (183-251)||(28182071-28182140)
chr1 (183-235)||(34308474-34308526)
chr1 (190-234)||(37577651-37577695)
chr1 (180-248)||(49681669-49681737)
chr1 (183-226)||(168900-168943)
chr1 (181-248)||(7558437-7558504)
chr1 (185-236)||(11548800-11548851)
chr1 (190-248)||(13142673-13142732)
chr1 (189-248)||(19171766-19171825)
chr1 (183-226)||(32038487-32038530)
chr1 (190-248)||(37853141-37853200)
chr1 (190-248)||(46391872-46391931)
chr1 (190-248)||(17171919-17171977)
chr1 (184-226)||(23026593-23026635)
chr1 (188-234)||(24992748-24992794)
chr1 (190-248)||(45818009-45818067)
chr1 (181-226)||(169624-169669)
chr1 (189-226)||(10120793-10120830)
chr1 (189-226)||(17172667-17172704)
chr1 (189-237)||(7407008-7407056)
chr1 (189-248)||(36390372-36390432)
chr1 (183-226)||(27789905-27789948)
chr1 (180-238)||(9778968-9779026)
chr1 (182-216)||(49453199-49453233)
chr1 (188-238)||(50271787-50271837)
chr1 (178-219)||(4135538-4135579)
chr1 (181-238)||(9778225-9778282)
chr1 (189-238)||(25671168-25671217)
chr1 (181-226)||(25733177-25733222)
chr1 (188-244)||(25672028-25672084)
chr1 (190-234)||(27790713-27790757)
[»] scaffold0176 (1 HSPs)
scaffold0176 (180-248)||(26579-26648)
[»] scaffold2007 (1 HSPs)
scaffold2007 (185-248)||(738-802)
[»] scaffold0085 (5 HSPs)
scaffold0085 (178-226)||(15852-15900)
scaffold0085 (190-248)||(22076-22134)
scaffold0085 (178-238)||(15080-15140)
scaffold0085 (183-238)||(15021-15076)
scaffold0085 (183-217)||(21501-21535)
[»] scaffold0093 (1 HSPs)
scaffold0093 (183-234)||(23727-23778)
[»] scaffold0086 (1 HSPs)
scaffold0086 (183-248)||(8290-8356)
[»] scaffold0002 (1 HSPs)
scaffold0002 (183-248)||(428900-428965)
[»] scaffold0504 (1 HSPs)
scaffold0504 (190-248)||(5385-5444)
[»] scaffold0096 (1 HSPs)
scaffold0096 (190-248)||(39883-39942)
[»] scaffold1207 (1 HSPs)
scaffold1207 (183-248)||(1575-1640)
[»] scaffold0418 (1 HSPs)
scaffold0418 (181-248)||(6881-6949)
[»] scaffold0012 (2 HSPs)
scaffold0012 (189-248)||(180829-180888)
scaffold0012 (180-226)||(181020-181066)
[»] scaffold0164 (1 HSPs)
scaffold0164 (189-248)||(11659-11718)
[»] scaffold1213 (1 HSPs)
scaffold1213 (184-226)||(1906-1948)


Alignment Details
Target: chr6 (Bit Score: 177; Significance: 2e-95; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 9365937 - 9365705
Alignment:
Q  16 atgaatcaggactagaggtgattgtgtagttgagatcagttagaacatacatgcttccattgttgttcgtttaatgagtttgtgatcatatgaaagtaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9365937 atgaatcaggactagaggtgattgtgtagttgagatcagttagaacatacatacttccattgttgttcgtttaatgagtttgtgatcatatgaaagtaaa 9365838  T
Q  116 tggtgaaggctcacgtgagttagttaatttaagaaacaattacaacctttggattnnnnnnnttgatggttgagatttggtgtcaacgaatccgttgaca 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |    
T  9365837 tggtgaaggctcacgtgagttagttaatttaagaaacaattacaacctttggatt-aaaaaattgatggttgagatttggtgtcaacgaatccgttgata 9365739  T
Q  216 cctggtgtcaatgaatcctgactatatatatattg 250  Q
      || |||||||| || ||||||||||||||||||    
T  9365738 tttgatgtcaatggat-ctgactatatatatattg 9365705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 19311830 - 19311887
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatata 245  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19311830 agatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactatatata 19311887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 26529511 - 26529576
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  26529511 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatatat 26529576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 10171329 - 10171263
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  10171329 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 10171263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 33436277 - 33436337
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||    
T  33436277 agatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactatatatatat 33436337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 8488522 - 8488471
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8488522 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 8488471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 10171964 - 10172029
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| |||||||||    
T  10171964 ggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactctatatatat 10172029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 19323762 - 19323831
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||| || ||||||||||    
T  19323762 gatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctcatatatatat 19323831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 19323041 - 19322993
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19323041 ttgatggatgagatttggtgtcaacgaatccgttgacacctggtgtcaa 19322993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 5861944 - 5861890
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatc 232  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  5861944 ttgatggttgagatttggtgtcaacgaatctgttggcacctggtgtcaacgaatc 5861890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 9441292 - 9441238
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  9441292 atggatgagatttggtgtcaacggatccgttgacacctggtgtcaacgaatcctg 9441238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 12344947 - 12344881
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| ||||| ||| ||||||||||    
T  12344947 ggttgagatttggtatcaacgaatctgttgacacctggtgtcaatggatcctaactcatatatatat 12344881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 26528876 - 26528810
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| ||||||||||    
T  26528876 ggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactcatatatatat 26528810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 18227787 - 18227719
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||    
T  18227787 gatggttgtgatttggtgtcaacgaatccgttgaca-ctggtgtcaacggatcctgactcatatatatat 18227719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 19311053 - 19310988
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||| |||||||| |||||||||||||| | ||||||||| ||||||||||    
T  19311053 gttgagatttggtgtcaacaaatccgttaacacctggtgtcaacggatcctgactcatatatatat 19310988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 20833972 - 20834030
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||| || |||| |||||||||||||| | |||||||||||||||||||    
T  20833972 atttggtgtcaacggattcgttaacacctggtgtcaacggatcctgactatatatatat 20834030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 8489284 - 8489333
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| ||||||| ||||||||||||||||||| | |||||||||    
T  8489284 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgact 8489333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 33435388 - 33435327
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||| ||||| |||||||| | ||||| ||| ||||||||||    
T  33435388 agatttggtgtcaacgaatccgttaacaccaggtgtcaacggatcctaactcatatatatat 33435327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 11434455 - 11434487
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgaca 215  Q
    |||||||||||||||||||||||||||||||||    
T  11434455 ggttgagatttggtgtcaacgaatccgttgaca 11434487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 25060871 - 25060803
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||| |||| |||||||| |||||||||||||||||| | ||||| ||| ||||||||||    
T  25060871 atggatgagattttgtgttaacgaatctgttgacacctggtgtcaacggatcctaactcatatatatat 25060803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 505583 - 505524
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||| ||||||||||| ||||||   ||||||||| ||||||||||    
T  505583 atttggtgtcaacgaatctgttgacacctgatgtcaacagatcctgactcatatatatat 505524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 1367014 - 1366959
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatata 245  Q
    ||||||||||||||||||||||||||||||  ||||| | |||||| || ||||||    
T  1367014 atttggtgtcaacgaatccgttgacacctgaagtcaacggatcctgtctctatata 1366959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 3623228 - 3623185
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||    
T  3623228 ggttgagatttggtgtcaaagaattcgttgacacctgatgtcaa 3623185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 21133225 - 21133291
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||||||||||| |||| |||| ||||||||| | ||||| ||| ||||||||||    
T  21133225 ggttaagatttggtgtcaacgaattcgttaacacatggtgtcaacggatcctaactcatatatatat 21133291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 9441976 - 9442021
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||| ||||||||| |||||||||||||||||||| ||||||    
T  9441976 atggatgaaatttggtgtgaacgaatccgttgacacctgatgtcaa 9442021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 9442066 - 9442102
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  9442066 atttggtgtgaacgaatccgttgacacctgatgtcaa 9442102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 18977606 - 18977833
Alignment:
Q  16 atgaatcaggactagaggtgattgtgtagttgagatcagttagaacatacatgcttccattgttgttcgtttaatgagtttgtgatcatatgaaagtaaa 115  Q
    |||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  18977606 atgaatcaagactagaggtgattg-gtagttgagattagtcagaacatacatgcttccattgttgttcgtttaatgagtgtgtgatcatatgaaagtata 18977704  T
Q  116 tggtgaaggctcacgtgagttagttaatttaagaaacaattacaacctttggattnnnnnnnttgatggttgagatttggtgtcaacgaatccgttgaca 215  Q
    |||||||||||||| ||    ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||    
T  18977705 tggtgaaggctcacctg----agttaatttaagaaacaattacaacctttggattaaaaaaattgatggttgagatttggtgttaacgaatccgttgaca 18977800  T
Q  216 cctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||| |||||||||||||||||||    
T  18977801 cctggtgtcaatggatcctgactatatatatat 18977833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 115 - 248
Target Start/End: Complemental strand, 37706544 - 37706416
Alignment:
Q  115 atggtgaaggctcacgtgagttagttaatttaagaaacaattacaacctttggattnnnnnnnttgatggttgagatttggtgtcaacgaatccgttgac 214  Q
    ||||||||||||||| |||||||    |||||||||||||||||||| ||||||||       ||||||||||| ||||||||| ||||||||||||||     
T  37706544 atggtgaaggctcacctgagtta----atttaagaaacaattacaac-tttggattaaaaaaattgatggttgaaatttggtgttaacgaatccgttgat 37706450  T
Q  215 acctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||| ||||||||| |||||||||    
T  37706449 acctggtgtcaatggatcctgactctatatatat 37706416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 7668537 - 7668470
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  7668537 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactatatatatat 7668470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 25342555 - 25342485
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||    
T  25342555 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatatat 25342485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 46428243 - 46428175
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatata 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  46428243 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 46428175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 30660651 - 30660581
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||    
T  30660651 ttgatggatgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatatat 30660581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 37949658 - 37949593
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||    
T  37949658 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctctatatatat 37949593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 25343361 - 25343313
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25343361 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 25343313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 26636156 - 26636101
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  26636156 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact 26636101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 37950461 - 37950532
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  37950461 ttgatggatgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatat 37950532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 25343233 - 25343299
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatat 244  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| | ||||||||| |||||    
T  25343233 ttgatggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgactctatat 25343299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 30661454 - 30661520
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  30661454 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatat 30661520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 19067690 - 19067625
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||||||  |||||||||||    
T  19067690 ggttgagatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcctgtatatatatatat 19067625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 21496982 - 21497047
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||| |||||||||||| |||||| | ||||||| |||||||||||    
T  21496982 ggttgagatttggtgtcaacgaattcgttgacacctgttgtcaacggatcctgattatatatatat 21497047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 25599073 - 25599020
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  25599073 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact 25599020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 45162021 - 45161956
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||    
T  45162021 gttgagatttggtgtcaacgaatccgttaacacctggtgtcaatggatcctaactcatatatatat 45161956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 24719386 - 24719323
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| |||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||    
T  24719386 ttgatatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctaactatatatatat 24719323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 26636859 - 26636914
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  26636859 ggttgagatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcctgact 26636914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 27948504 - 27948433
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| ||||||||||    
T  27948504 ttgaaggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatatat 27948433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 45099899 - 45099958
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  45099899 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 45099958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 46428814 - 46428881
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  46428814 atggatgagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctgactctatatatat 46428881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 3772525 - 3772591
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| ||||||||||    
T  3772525 ggttgagatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctaactcatatatatat 3772591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 47719708 - 47719754
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  47719708 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 47719754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 13785597 - 13785658
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  13785597 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatat 13785658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 16664121 - 16664190
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| | ||||| ||| ||||||||||    
T  16664121 gatggttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcatatatatat 16664190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 17638481 - 17638550
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| | ||||| ||| ||||||||||    
T  17638481 gatggttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcatatatatat 17638550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 24389613 - 24389658
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  24389613 atggttgagatttggtgtcaatgaatccgttgacacctggtgtcaa 24389658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 3903340 - 3903404
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac-tatatatatat 248  Q
    |||| |||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||    
T  3903340 ttgatatttggtgtcaacggatccgttgacacctggtgtcaacggatcctgacttatatatatat 3903404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 45099185 - 45099126
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||| ||||||| |||||||||||| |||||| | |||||||||||||||||||    
T  45099185 gatttggtgttaacgaattcgttgacacctgatgtcaacggatcctgactatatatatat 45099126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 19068394 - 19068460
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | |||||| || ||||||||||    
T  19068394 ggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctcatatatatat 19068460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 43065120 - 43065158
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43065120 agatttggtgtcaacgaatccgttgacacctggtgtcaa 43065158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 1417663 - 1417618
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  1417663 atggttaagatttggtgtcaacgaattcgttgacacctggtgtcaa 1417618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 3029197 - 3029262
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| | |||||   |||||||||||    
T  3029197 ggttgggatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatatatatatatat 3029262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 24453730 - 24453775
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcc 233  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  24453730 agatttggtgtcaacaaatccgttgacacctggtgtcaacgaatcc 24453775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 38225972 - 38226017
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  38225972 atggttaagatttggtgtcaacgaattcgttgacacctggtgtcaa 38226017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 3028027 - 3027987
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgt 223  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  3028027 ggttgagatttggtgtcaacgaattcgttgacacctggtgt 3027987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 37395496 - 37395564
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  37395496 atggatgaaatttggtgttaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatat 37395564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 40273613 - 40273570
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  40273613 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaa 40273570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 48718196 - 48718255
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||| |||| |||||||||| |||||||| ||||| ||| |||||||||    
T  48718196 gatttggtgtcaacggatccattgacacctgctgtcaatggatcctaactctatatatat 48718255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 15305245 - 15305303
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatat 246  Q
    |||||||||||||||||| | |||||||||| |||||||| ||||||||| ||||||||    
T  15305245 gatttggtgtcaacgaattcattgacacctgatgtcaatggatcctgactcatatatat 15305303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 23889901 - 23889867
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgaca 215  Q
    |||||||||||||||||||||||||||||||||||    
T  23889901 atggttgagatttggtgtcaacgaatccgttgaca 23889867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 23901098 - 23901144
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||    
T  23901098 agatttagtgtcaacgaattcgttgacacctggtgtcaatggatcct 23901144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 23902096 - 23902062
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgaca 215  Q
    |||||||||||||||||||||||||||||||||||    
T  23902096 atggttgagatttggtgtcaacgaatccgttgaca 23902062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 3688432 - 3688371
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||| | |||||||||| | |||||| || ||||||||||    
T  3688432 agatttggtgtcaacgaatccgttgatatctggtgtcaacggatcctgtctcatatatatat 3688371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 14686186 - 14686141
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||    
T  14686186 atggatgagatttggtgtcaacaaatccgttgacacttggtgtcaa 14686141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 31278159 - 31278196
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  31278159 gatttggtgtcaacgaatccgttgacatctggtgtcaa 31278196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 25599821 - 25599873
Alignment:
Q  186 tgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||| |||||  ||||||||||||||||| | |||||||||    
T  25599821 tgagatttggtgtcaatgaatctattgacacctggtgtcaacggatcctgact 25599873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 42421044 - 42421092
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| |||||||||||||||||||| |||| ||||||| ||||||||||    
T  42421044 ttgacggttgagatttggtgtcaacaaatcggttgacatctggtgtcaa 42421092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 18977064 - 18977033
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttg 212  Q
    ||||||||||||||||||||||||||||||||    
T  18977064 atggttgagatttggtgtcaacgaatccgttg 18977033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 24581094 - 24581063
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacac 216  Q
    ||||||||||||||||||||||||||||||||    
T  24581094 ttgagatttggtgtcaacgaatccgttgacac 24581063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 36378858 - 36378799
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||| |||||| ||||||||   ||||||||| ||||||||||    
T  36378858 atttggtgtcaacgaatccgtcgacaccaggtgtcaacagatcctgactcatatatatat 36378799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 45931218 - 45931281
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||| |||||||||||  |||||| || | ||||| ||| |||||||||    
T  45931218 ttgagatttggtgtcaacggatccgttgacatatggtgttaacggatcctaactctatatatat 45931281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 48670924 - 48670971
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatg 228  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||||    
T  48670924 atggatgagatttggtgtgaacaaattcgttgacacctggtgtcaatg 48670971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 14305138 - 14305100
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  14305138 agatttggtgtcaatgaatccgttgacacctagtgtcaa 14305100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 23901204 - 23901150
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatat 244  Q
    |||||||||||||||||| ||| || ||||||||||| | ||| |||||||||||    
T  23901204 atttggtgtcaacgaatctgttaacccctggtgtcaacggatcttgactatatat 23901150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 31954292 - 31954326
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacc 217  Q
    |||| ||||||||||||||||||||||||||||||    
T  31954292 ggttaagatttggtgtcaacgaatccgttgacacc 31954326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 223
Target Start/End: Complemental strand, 31277469 - 31277436
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgt 223  Q
    ||||||||||||||||| ||||||||||||||||    
T  31277469 atttggtgtcaacgaattcgttgacacctggtgt 31277436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 47718953 - 47718924
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacc 217  Q
    ||||||||||||||||||||||||||||||    
T  47718953 agatttggtgtcaacgaatccgttgacacc 47718924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 7669396 - 7669432
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacac 216  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  7669396 gatggttaagatttggtgttaacgaatccgttgacac 7669432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 8376790 - 8376829
Alignment:
Q  186 tgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  8376790 tgagatttagtgtcaa-gaatccgttgacacctggtgtcaa 8376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 38225347 - 38225287
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||| |||| || ||||||||||||||||||| | ||| ||||| ||||||||||    
T  38225347 gatttggtgttaacggattcgttgacacctggtgtcaacggatcatgactcatatatatat 38225287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 24934433 - 24934631
Alignment:
Q  16 atgaatcaggactagaggtgattgtgtagttgagatcagttagaacatacatgcttccattgttgttcgtttaatgagtttgtgatcatatgaaagtaaa 115  Q
    |||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |    
T  24934433 atgaatcaggacaagaggtgattg-gtagtttagatcagtcagaacatacatgcttccaatgttgttcgtttaatgagtgtgtgatcatatgaaagtata 24934531  T
Q  116 tggtgaaggctcacgtgagttagttaatttaagaaacaattacaacctttggattnnnnnnnttgatggttgagatttggtgtcaacgaatccgttgaca 215  Q
    |||||||||||||| ||    ||||||||||||||||| ||||||||||||||||       ||||||||||||||||||||| ||||||||||||||||    
T  24934532 tggtgaaggctcacctg----agttaatttaagaaacagttacaacctttggattaaaaaaattgatggttgagatttggtgttaacgaatccgttgaca 24934627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 1296438 - 1296368
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  1296438 ttgatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactctatatatat 1296368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 11750311 - 11750246
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  11750311 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctaactctatatatat 11750246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 1297116 - 1297187
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  1297116 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatat 1297187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 9276323 - 9276392
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatat 246  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  9276323 ttgatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcatatatat 9276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 9275645 - 9275597
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9275645 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 9275597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 8542546 - 8542612
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac-tatatatatat 248  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||||||||    
T  8542546 ggttgagatttggtgtcaacgaatccgttgacacctagtgtccatggatcctgacttatatatatat 8542612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 29719500 - 29719434
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  29719500 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatat 29719434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 6584222 - 6584291
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||    
T  6584222 gatggttgtgatttggtgtcaacgaatccgttgacacttggtgtcaatggattctgactcatatatatat 6584291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 23343832 - 23343768
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||| |||||||||||||||||||| ||||||||||   |||||||||||||||||||    
T  23343832 gttgagatttgatgtcaacgaatccgttgacatctggtgtcaacagatcctgactatatatatat 23343768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 18821235 - 18821294
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||| |||||||||    
T  18821235 gatttggtgtcaattaatccgttgacacctggtgtcaatggatcctgactctatatatat 18821294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 22301866 - 22301933
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| | |||||  ||||||||||||    
T  22301866 atggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctatatatatat 22301933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 22560566 - 22560621
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  22560566 ggttgagatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgact 22560621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 36237687 - 36237620
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||| | |||||||    
T  36237687 atggttgaaatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactctctatatat 36237620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 38361126 - 38361055
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| || ||||||||||    
T  38361126 ttgatggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacgtatcctgtctcatatatatat 38361055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 15774261 - 15774191
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||| | |||||  ||||||||||||    
T  15774261 ttgatggttgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcctatctatatatatat 15774191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 24754995 - 24755057
Alignment:
Q  186 tgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||| ||||||||||  ||||||||||||||||| | |||||||||||||||||||    
T  24754995 tgagatttggtttcaacgaatcaattgacacctggtgtcaacggatcctgactatatatatat 24755057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 29513150 - 29513196
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29513150 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 29513196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 11007287 - 11007242
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  11007287 atggttgagatttagtgtcaacgaatccgttgacacctggtgtcaa 11007242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 42182613 - 42182678
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |  |||| ||| |||||||||    
T  42182613 ggttgagatttggtgtcaacgaatcccttgacacctggtgtcaacgggtcctaactctatatatat 42182678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 42459103 - 42459050
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||||||||    
T  42459103 ttgagatttgatgtcaacgaatctgttgacacctggtgtcaatggatcctgact 42459050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 9540387 - 9540319
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| || ||||||||||    
T  9540387 atggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctcatatatatat 9540319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 12725611 - 12725679
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  12725611 atggttgggatttggtgtcaacaaatccgttgacacctggtgtcaacggatcctaactcatatatatat 12725679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 24121286 - 24121354
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||| |||| ||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  24121286 atggatgagatttggtctcaatgaatctgttgacacctggtgtcaatggatcctgactcatatatatat 24121354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 16692977 - 16693015
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16692977 agatttggtgtcaacgaatccgttgacacctggtgtcaa 16693015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 29559415 - 29559461
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  29559415 gatgattgagatttggtgtcaacgaattcgttgacacctggtgtcaa 29559461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 18820480 - 18820431
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||    
T  18820480 gatttggtgtcaacgaatccgttgacacctgatgtcaatggatcccgact 18820431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 12724800 - 12724733
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatata 245  Q
    |||| ||||| ||||| ||||||||||||||||||| | |||||||||| ||||||| ||| ||||||    
T  12724800 ttgacggttgggatttagtgtcaacgaatccgttgataactggtgtcaacgaatcctaactctatata 12724733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 18174668 - 18174711
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  18174668 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaa 18174711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 24933892 - 24933825
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||| | |||||| || | |||||||    
T  24933892 atggttgagatttggtgtcaatgaattcgttgacaccaggtgtcaacggatcctgtctctctatatat 24933825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 40252070 - 40252031
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatg 228  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  40252070 gatttggtgtcaacgaatccgttgacacctggtgttaatg 40252031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 15902885 - 15902923
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  15902885 agattttgtgtcaacgaatccgttgacacctggtgtcaa 15902923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 23856689 - 23856624
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||  |||||||||||||| |||||||| | ||| | ||| |||||||||    
T  23856689 ggttgagatttggtgtcaatcaatccgttgacaccaggtgtcaacggatcttaactctatatatat 23856624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 26752719 - 26752764
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  26752719 atggttaagatttgatgtcaacgaattcgttgacacctggtgtcaa 26752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 36238733 - 36238778
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcc 233  Q
    |||||||||||||| ||||||||||| |||||||||||||| ||||    
T  36238733 agatttggtgtcaatgaatccgttgatacctggtgtcaatggatcc 36238778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 8541800 - 8541740
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||| |||||||||||| |||||| ||||| |||||| | ||||||||| |||||||||    
T  8541800 agattttgtgtcaacgaattcgttgagacctgatgtcaacggatcctgactctatatatat 8541740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 11751073 - 11751133
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||| ||||||| ||||||||||||||||||| | ||||| ||| ||||||||||    
T  11751073 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctaactcatatatatat 11751133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 22301242 - 22301182
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||| |||| || ||||||||||||||||||| | ||||||||| ||||||||||    
T  22301242 gatttggtgttaacggattcgttgacacctggtgtcaacggatcctgactcatatatatat 22301182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 23857028 - 23857088
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||| |||||||||||||| |||||||| | ||||| ||| ||||||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcctaactcatatatatat 23857088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 27177959 - 27177923
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||| |||||||||||||||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaa 27177923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 29512423 - 29512359
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||| ||| |||||||||| |||||||| | ||| ||||| ||||||||||    
T  29512423 ttgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcatgactcatatatatat 29512359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 34812860 - 34812908
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac 237  Q
    |||||||||| |||||||||||||||| |||||||||| | ||||||||    
T  34812860 gatttggtgttaacgaatccgttgacaactggtgtcaacggatcctgac 34812908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 8669195 - 8669234
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacctggtgt 223  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  8669195 gttgggatttggtgtcaacgaatctgttgacacctggtgt 8669234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 9541037 - 9541096
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatata 247  Q
    ||||||||||||||||||| |||||||| || ||| ||| | |||||| |||||||||||    
T  9541037 agatttggtgtcaacgaattcgttgacatctcgtgccaacggatcctgtctatatatata 9541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 18174153 - 18174110
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||    
T  18174153 ggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaa 18174110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 19918720 - 19918775
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||| |||||||||||||||||||| | | |||||| | |||||||||    
T  19918720 ggttgagatttgatgtcaacgaatccgttgacatcagatgtcaacggatcctgact 19918775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 20632915 - 20632973
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| |||||| | || |||| |||||||||||||| | |||||||||||||||||||    
T  20632915 atttgatgtcaatggattcgttaacacctggtgtcaacggatcctgactatatatatat 20632973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 22559912 - 22559878
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacc 217  Q
    ||||||||||||||||||||||||| |||||||||    
T  22559912 ggttgagatttggtgtcaacgaatctgttgacacc 22559878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 26587202 - 26587136
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||| ||||||||||||  |||||||||| |||||| | || |||||| ||||||||||    
T  26587202 ggttgagatttgatgtcaacgaatctattgacacctgatgtcaacggattctgactcatatatatat 26587136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 27178649 - 27178686
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||  |||||||||||||||||||||||    
T  27178649 gatttggtgtcaaacaatccgttgacacctggtgtcaa 27178686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 15902176 - 15902108
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||||||||   | |||||||||||||||||||| | |||||| || ||||||||||    
T  15902176 atggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcctgtctcatatatatat 15902108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 20432373 - 20432409
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  20432373 atttggtgtcaatgaatccgttgatacctggtgtcaa 20432409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 26588285 - 26588249
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  26588285 atttggtgtcaacgaatccgttaacacctgatgtcaa 26588249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 26589022 - 26589058
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| |||||||||||||||||||| |||||||||    
T  26589022 atttggagtcaacgaatccgttgacacttggtgtcaa 26589058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 30573708 - 30573773
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  30573708 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactctatatatat 30573773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 20774179 - 20774245
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  20774179 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcatatatatat 20774245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 47688478 - 47688543
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||    
T  47688478 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatatat 47688543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 53147925 - 53147860
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||    
T  53147925 ggttgggatttggtgtcaacgaatccgttgacatctggtgtcaatggatcctgattatatatatat 53147860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 16903637 - 16903692
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcc 233  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16903637 ttgacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 16903692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 47785795 - 47785841
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47785795 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 47785841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 7842525 - 7842581
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctga 236  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||    
T  7842525 gatggttgagatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctga 7842581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 16903677 - 16903733
Alignment:
Q  193 tggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16903677 tggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactcatatatatat 16903733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 24158819 - 24158874
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  24158819 ggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctgact 24158874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 26147026 - 26147097
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| ||||||||||    
T  26147026 ttgaaggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatatat 26147097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 53148610 - 53148665
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  53148610 ggttgagatttggtgtcaacgaatctgttgacacctgatgtcaatggatcctgact 53148665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 53733727 - 53733774
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaat 227  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53733727 gatggttgaaatttggtgtcaacgaatccgttgacacctggtgtcaat 53733774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 8248519 - 8248585
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||    
T  8248519 ggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcatatatatat 8248585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 8266184 - 8266250
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||    
T  8266184 ggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcatatatatat 8266250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 11939435 - 11939505
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||||||||| ||||||||||||||||||||||  |||||||| | ||||| |||||||||||||    
T  11939435 ttgaaggttgagatttcgtgtcaacgaatccgttgacactaggtgtcaacggatcctaactatatatatat 11939505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 53732489 - 53732423
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  53732489 ggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatat 53732423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 53772854 - 53772796
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||    
T  53772854 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatatat 53772796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 1465377 - 1465308
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatatt 249  Q
    |||||||| |||||| |||||| ||||| |||||||||||||||||| | ||||||||| ||||||||||    
T  1465377 gatggttgtgatttgatgtcaatgaatctgttgacacctggtgtcaacggatcctgactctatatatatt 1465308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 19080441 - 19080396
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  19080441 atggttgaaatttggtgtcaacgaatccgttgacacctggtgtcaa 19080396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 31329722 - 31329782
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  31329722 gatttggtgttaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 31329782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 55000736 - 55000676
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||  || |||||||||    
T  55000736 agatttggtgtcaacgaatccgttgacatctggtgtcaatggatcctatctctatatatat 55000676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 55976959 - 55977019
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||   |||||||||||    
T  55976959 agatttggtgtcaacgaatccgttgacacctggtgtcgatggatcctatatatatatatat 55977019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 599302 - 599365
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||| |||||||| | |||||   |||||||||||    
T  599302 ttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctatatatatatatat 599365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 7841595 - 7841532
Alignment:
Q  186 tgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||||||    
T  7841595 tgagatttggtgtcaacgaatccgttaacacctgatgtcaacggatcctgactcatatatatat 7841532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 24374843 - 24374788
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||||||||||| |||||||| |||||||||| | |||||||||    
T  24374843 ggttgagatttggtgtcaacgaattcgttgacagctggtgtcaacggatcctgact 24374788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 40347611 - 40347556
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||| ||||||    
T  40347611 gatggttgagatttggtgtaaacggattcgttgacacctggtgtcaatggatcctg 40347556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 44469540 - 44469481
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||| ||||||||||||||||||  | ||| |||||||||||||||    
T  44469540 gatttggtgtcaacgaattcgttgacacctggtgtcatcggatcatgactatatatatat 44469481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 2446158 - 2446228
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatattg 250  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||| | ||||| ||| ||||||||||||    
T  2446158 atggatgagatttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactcatatatatattg 2446228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 24551927 - 24551973
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  24551927 agatttggtgtcaacaaatccgttgacacctggtgtcaatggatcct 24551973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 55976215 - 55976177
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||    
T  55976215 agatttggtgtcaacgaatccgttgacacctggtgtcaa 55976177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 11938770 - 11938725
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgt 223  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  11938770 ttgaaggttgagatttggtgtcaacgaattcgttgacacctggtgt 11938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 43146645 - 43146690
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  43146645 atggatgagatttggtgtcaaggaatccgttgacacctggtgtcaa 43146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 44792641 - 44792690
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  44792641 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 44792690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 52871346 - 52871309
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52871346 gatttggtgtcaacgaatccgttgacacctggtgtcaa 52871309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 53773590 - 53773651
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||| ||| ||||||||||    
T  53773590 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctaactcatatatatat 53773651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 1866402 - 1866354
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  1866402 ttgatggttgagatttggtgtcaacgaattcattgacacctagtgtcaa 1866354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 2444419 - 2444383
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaa 2444383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 5046038 - 5046002
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctg 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  5046038 ggttgagatttggtgtcaacgaatccgttgacacctg 5046002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 9365224 - 9365168
Alignment:
Q  182 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||| ||| |||||||||||||||| || | |||||||||    
T  9365224 tggttgagatttggtgtcaacaaattcgttgacacctggtgttaacggatcctgact 9365168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 9365810 - 9365858
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  9365810 ttgacggttgtgatttggtgtcaatgaatccgttgacacctggtgtcaa 9365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 19550333 - 19550297
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||    
T  19550333 atttggtgtcaacgaatccgttgacacctggtgtcaa 19550297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 40495151 - 40495083
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||| ||||||||||||||||  |||||||||||||||||| | ||||||||| ||||||||||    
T  40495151 atggctgaggtttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcatatatatat 40495083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 56262532 - 56262480
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | ||||||    
T  56262532 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 56262480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 8247750 - 8247695
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||| |||||| ||||||||||||||||||||||| |||||||| | |||||||||    
T  8247750 ggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcctgact 8247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 44791772 - 44791713
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||| ||||||| ||||||||||||||| ||||| ||||||||| | |||||||    
T  44791772 gatttggtgttaacgaattcgttgacacctggtgccaatggatcctgactctttatatat 44791713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 55001439 - 55001482
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  55001439 ggttaagatttagtgtcaacgaatccgttgacacctggtgtcaa 55001482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 5590140 - 5590083
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| ||||||||||||||||||||||| || |||| | |||||||||||||||||||    
T  5590140 atttgttgtcaacgaatccgttgacacct-gtatcaacggatcctgactatatatatat 5590083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 48128230 - 48128287
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| ||||||||||||||||||||||| || |||| | |||||||||||||||||||    
T  48128230 atttgttgtcaacgaatccgttgacacct-gtatcaacggatcctgactatatatatat 48128287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 3654520 - 3654557
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||| |||||    
T  3654520 gatttggtgtcaacgaatccgttgacacctggcgtcaa 3654557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 24551743 - 24551698
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||    
T  24551743 gatttgatgtcaacgaatccgtcgacacctggtgtcaatggatcct 24551698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 42882686 - 42882723
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  42882686 gatttggtgtcaacgaatccgttgacatctggtgtcaa 42882723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 47687963 - 47687898
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatata 247  Q
    ||||| |||||||||||||||||| |||| |||||||||||||| | ||||| ||| |||||||||    
T  47687963 ggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactcatatatata 47687898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 56263071 - 56263116
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatg 228  Q
    |||||||||||||||| |||| || |||||||||||||||||||||    
T  56263071 ggttgagatttggtgtaaacggattcgttgacacctggtgtcaatg 56263116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 1867784 - 1867852
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatat 246  Q
    |||||||||||||||| || ||||| ||| ||||||||| |||||| ||  |||||||||| |||||||    
T  1867784 ttgatggttgagatttagtatcaacaaattcgttgacacttggtgtgaacaaatcctgactctatatat 1867852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 5046486 - 5046546
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||| ||||| |||||||||||| | |||||   |||||||||||    
T  5046486 agatttggtgtcaacgaatctgttgatacctggtgtcaacggatcctatatatatatatat 5046546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 16902939 - 16902903
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgac 214  Q
    ||||||||||||||||||||||||||||| |||||||    
T  16902939 ttgatggttgagatttggtgtcaacgaattcgttgac 16902903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 32088867 - 32088835
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggt 221  Q
    |||||||||||||||||||||||||||||||||    
T  32088867 gatttggtgtcaacgaatccgttgacacctggt 32088835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 8265415 - 8265372
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||    
T  8265415 ggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaa 8265372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 12920273 - 12920316
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||    
T  12920273 ggttgagatttggtgtcaacgaatctgttaatacctggtgtcaa 12920316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 26159620 - 26159663
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||| |||||||||||||||||||||||||||| || ||||||    
T  26159620 ggttgcgatttggtgtcaacgaatccgttgacacttgatgtcaa 26159663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 46168186 - 46168127
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| |||||||| | |||||||||||||| |||||| | ||||| |||||||||||||    
T  46168186 gatttagtgtcaacaattccgttgacacctgatgtcaacggatcctaactatatatatat 46168127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 142520 - 142566
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||| |||||||||||||| |||| |||||||||| ||||||||    
T  142520 gatggttaagatttggtgtcaatgaattcgttgacacccggtgtcaa 142566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 12368666 - 12368720
Alignment:
Q  195 gtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||| ||||||||||||||| ||||||| | ||||||||| ||||||||||    
T  12368666 gtgtcaacaaatccgttgacacctagtgtcaacggatcctgactcatatatatat 12368720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 7841844 - 7841811
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacc 217  Q
    ||||||||||||||||||||||| ||||||||||    
T  7841844 gttgagatttggtgtcaacgaattcgttgacacc 7841811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 12919633 - 12919596
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  12919633 gatttggtgttaacgaacccgttgacacctggtgtcaa 12919596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 207
Target Start/End: Complemental strand, 26279230 - 26279201
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatc 207  Q
    ||||||||||||||||||||||||||||||    
T  26279230 ttgatggttgagatttggtgtcaacgaatc 26279201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 42880956 - 42880919
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  42880956 gatttggtgtcaacgaatctgttgtcacctggtgtcaa 42880919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 43146725 - 43146692
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacac 216  Q
    |||| |||||||||||||||||||||||||||||    
T  43146725 ggttaagatttggtgtcaacgaatccgttgacac 43146692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 219
Target Start/End: Complemental strand, 50184475 - 50184446
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctg 219  Q
    ||||||||||||||||||||||||||||||    
T  50184475 atttggtgtcaacgaatccgttgacacctg 50184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 37273199 - 37273155
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatc 232  Q
    |||||||||||||||| |||| |||||| |||||||||| |||||    
T  37273199 agatttggtgtcaacggatccattgacatctggtgtcaacgaatc 37273155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 41458087 - 41458022
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  41458087 ggttgagatttggtgtcaacgaatccgttgacacctggtatcaacgaatcctgactctatatatat 41458022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 48765069 - 48765134
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  48765069 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgactatatatatat 48765134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 55373703 - 55373770
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  55373703 atggttggaatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactctatatatat 55373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 37988215 - 37988283
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  37988215 atggctgagatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctgactcatatatatat 37988283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 264518 - 264455
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  264518 ttgagatttggtgtcaacaaatccattgacacctggtgtcaatggatcctaactatatatatat 264455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 46150726 - 46150789
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatat 244  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||    
T  46150726 atggttgagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcctgactctatat 46150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 48648257 - 48648191
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  48648257 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 48648191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 48764531 - 48764465
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||    
T  48764531 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctgactcatatatatat 48764465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 265099 - 265159
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatata 245  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||    
T  265099 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcatgactacatata 265159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 37520555 - 37520614
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac 237  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| | ||||||||    
T  37520555 ttgatggttgagatttggtgtcaacgaattcgttgacacctggtatcaacggatcctgac 37520614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 31974708 - 31974662
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  31974708 gatggttgagatttggtgtcaacgaatccgttgacacttggtgtcaa 31974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 48649172 - 48649226
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac 237  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  48649172 ggttaagatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctgac 48649226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 21727533 - 21727594
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  21727533 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatat 21727594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 45081400 - 45081457
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| | |||||||||    
T  45081400 atggttgagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcctgact 45081457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 51827493 - 51827558
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| |||||||||| ||||||||||||||||||| |||||||| | ||| |||||||||||||||    
T  51827493 ggttaagatttggtgacaacgaatccgttgacaccaggtgtcaacggatcttgactatatatatat 51827558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 14871204 - 14871152
Alignment:
Q  186 tgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  14871204 tgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgact 14871152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 17603217 - 17603157
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||   |||||||||||    
T  17603217 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatatatatatatat 17603157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 17605760 - 17605712
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaat 231  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  17605760 ggttgaaatttggtgtcaacgaatccgttgacacctggtgtcaacgaat 17605712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 27082824 - 27082764
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||    
T  27082824 gatttggtgtcaacgaattcgttgacacctagtgtcaatggatcctgactcatatatatat 27082764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 48413378 - 48413330
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  48413378 ttgacggttgtgatttggtgtcaacgaatccgttgacacctggtgtcaa 48413330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 981721 - 981678
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  981721 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaa 981678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 13477777 - 13477820
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  13477777 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaa 13477820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 20213536 - 20213595
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||| ||| ||||||||||||||| | ||||||||| |||||||||    
T  20213536 gatttggtgtcaacgaattcgtcgacacctggtgtcaacggatcctgactctatatatat 20213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 44699817 - 44699880
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatat 244  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  44699817 atggttaatatttggtgtcaacgaatccgttgacacctggtgtcagctgatcctgactatatat 44699880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 17603965 - 17604011
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||||||||||||||||||||||||||||||||||| || |||||    
T  17603965 agatttggtgtcaacgaatccgttgacacctggtgtcattggatcct 17604011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 40872814 - 40872872
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||| |||||||||||||||||||||||| | ||| | |||||||||||||    
T  40872814 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcttaactatatatatat 40872872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 46149678 - 46149633
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcc 233  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  46149678 agatttggtgtcaacgaatccattgacacctggtgtcaatggatcc 46149633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 13477105 - 13477045
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||| |||| ||||||||||||||||||| | ||||||||| ||||||||||    
T  13477105 gatttggtgtcaatgaattcgttgacacctggtgtcaacggatcctgactcatatatatat 13477045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 20213028 - 20212968
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||| ||||||||||||||||||| | || |||||| ||||||||||    
T  20213028 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcatatatatat 20212968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 31115600 - 31115664
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||| |||||||||| ||||||| | |||| |||| ||||||||||    
T  31115600 ttgagatttggtgtcaacgaatctgttgacacctagtgtcaacggatcccgactcatatatatat 31115664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 48507031 - 48507083
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | ||||||    
T  48507031 ggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 48507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 31114995 - 31114933
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||| |||||||||||||||||||   |||| || | |||||||||||||||||||    
T  31114995 ggttgagatttggtatcaacgaatccgttgacac---gtgttaacggatcctgactatatatatat 31114933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 33277509 - 33277568
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||| ||||||| ||||||||||||||||||| | || |||||| |||||||||    
T  33277509 gatttggtgttaacgaattcgttgacacctggtgtcaacggattctgactctatatatat 33277568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 52266452 - 52266507
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||||||||||| |||| ||||||||||| || | |||||||||    
T  52266452 ggttgagatttggtgtcaacgaattcgttaacacctggtgttaacggatcctgact 52266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 11654033 - 11654079
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||    
T  11654033 agatttggtgtcaacgaatccgttgagatctggtgtcaatggatcct 11654079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 29856682 - 29856716
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacc 217  Q
    |||||||||||||||||||||||||||||||||||    
T  29856682 ggttgagatttggtgtcaacgaatccgttgacacc 29856716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 44699915 - 44699881
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacc 217  Q
    |||||||||||||||||||||||||||||||||||    
T  44699915 ggttgagatttggtgtcaacgaatccgttgacacc 44699881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 52281821 - 52281755
Alignment:
Q  182 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||| | || |||||| | |||||||    
T  52281821 tggttgagatctggtgtcaacgaatccgttgacaccaggtatcaacggattctgactctctatatat 52281755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 23706797 - 23706838
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctg 219  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  23706797 ttgatggttgagatttggtgtcaacgaatatgttgacacctg 23706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 23725253 - 23725294
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctg 219  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  23725253 ttgatggttgagatttggtgtcaacgaatatgttgacacctg 23725294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 23743709 - 23743750
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctg 219  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  23743709 ttgatggttgagatttggtgtcaacgaatatgttgacacctg 23743750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 29856034 - 29856079
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||    
T  29856034 atggttgagatttggtgtcaatgaatacgttgacagctggtgtcaa 29856079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 6974747 - 6974787
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatg 228  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  6974747 agatttggtgtcaacgaatccgttgacacatggtggcaatg 6974787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 22925429 - 22925497
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||||||||||||  ||||||||||||||| | |||| |||||||| || ||||||||||    
T  22925429 atggatgagatttggtgtcaacagatccgttgacacctgatttcaacgaatcctgtctcatatatatat 22925497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 29856103 - 29856063
Alignment:
Q  186 tgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  29856103 tgagatttggtgtcaacgaatccgttgacaccagctgtcaa 29856063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 30222104 - 30222152
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||| ||||||||||  ||||||||||||||||| |||||||||||    
T  30222104 atttggtatcaacgaatctattgacacctggtgtcaacgaatcctgact 30222152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 37987280 - 37987244
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||| |||||||||||||||||    
T  37987280 atttggtgtcaacgaatccattgacacctggtgtcaa 37987244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 52282418 - 52282454
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||| ||||||||||||||||||||||||    
T  52282418 atttggtgtcaatgaatccgttgacacctggtgtcaa 52282454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 10847914 - 10847973
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||| ||||| ||||||||||||||| || | ||| ||| |||||||||||    
T  10847914 gatttggtgtcaatgaatctgttgacacctggtgttaacggatcttgattatatatatat 10847973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 11652341 - 11652302
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatg 228  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  11652341 gatttggtgtcaacgaatccgttgacacctgatgttaatg 11652302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 51826591 - 51826548
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||    
T  51826591 ggttaagatttggtgttaacgaatccgttgacatctggtgtcaa 51826548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 41474704 - 41474638
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||| |||| |||||||||||||||||| | |||||| | |||| |||| ||||||||||    
T  41474704 ggttgagattttgtgtaaacgaatccgttgacaccagatgtcaacggatccagactcatatatatat 41474638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Original strand, 45393964 - 45393994
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatcc 208  Q
    |||||||||||||||||||||||||||||||    
T  45393964 ttgatggttgagatttggtgtcaacgaatcc 45393994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 48506491 - 48506457
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacc 217  Q
    |||||||||||||||||||||||| ||||||||||    
T  48506491 ggttgagatttggtgtcaacgaattcgttgacacc 48506457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 51469283 - 51469321
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  51469283 agatttggtgtcaacgaatccgttgacacttgatgtcaa 51469321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 13349469 - 13349404
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| |||||||||||||||||||  ||||||||||||| ||||   ||||| | |||||||||||    
T  13349469 ggttaagatttggtgtcaacgaatttgttgacacctggtatcaaccgatcctaaatatatatatat 13349404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 54458670 - 54458707
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaa 54458707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 52605489 - 52605537
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||| ||| ||||| ||||||||||||||||||| | |||||||||    
T  52605489 atttggtatcatcgaattcgttgacacctggtgtcaacggatcctgact 52605537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 29046081 - 29046017
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  29046081 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatatat 29046017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 235645 - 235579
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  235645 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctaactcatatatatat 235579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 10554602 - 10554550
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcc 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10554602 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 10554550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 4084935 - 4084868
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||| |||||||||    
T  4084935 atggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctgactctatatatat 4084868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 29087980 - 29087913
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||    
T  29087980 atggatgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactctatatatat 29087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 234747 - 234689
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  234747 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatatat 234689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 236927 - 236993
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  236927 ggttgagatttggtgtctacgaatccgttgacacctggtgtcaatggatcctaactcatatatatat 236993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 6476787 - 6476841
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6476787 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 6476841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 14478967 - 14478909
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  14478967 atttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactatatatatat 14478909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 19128823 - 19128757
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  19128823 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 19128757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 28705877 - 28705943
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  28705877 ggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 28705943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 27364483 - 27364551
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | |||||| || ||||||||||    
T  27364483 atggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgtctcatatatatat 27364551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 237826 - 237885
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  237826 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 237885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 19359750 - 19359691
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  19359750 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 19359691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 1281884 - 1281838
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  1281884 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 1281838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 28705219 - 28705153
Alignment:
Q  182 tggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatata 247  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | || |||||| |||||||||    
T  28705219 tggttgagatttggtgtaaacgaatccgttgacacctggtgtcaacggatactgactcatatatata 28705153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 1283503 - 1283548
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcc 233  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  1283503 agatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcc 1283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Complemental strand, 7632143 - 7632105
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7632143 agatttggtgtcaacgaatccgttgacacctggtgtcaa 7632105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 17071277 - 17071211
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||| |||||||||||| |||||| | ||||| ||| ||||||||||    
T  17071277 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactcatatatatat 17071211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 34600314 - 34600248
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac-tatatatatat 248  Q
    |||||||||||||||||||||||| |||||||||||| |||||| | ||||| || |||||||||||    
T  34600314 ggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaacttatatatatat 34600248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 1554079 - 1554124
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  1554079 atggttaagatttggtgtcaacgaattcgttgacacctggtgtcaa 1554124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 17071792 - 17071857
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| |||||||||||||||||| |||| |||||||||||||| | ||||| ||| |||||||||    
T  17071792 ggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactctatatatat 17071857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 22212981 - 22213042
Alignment:
Q  187 gagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||| |||||||||||||||||| |||||   ||||| |||||||||||||    
T  22212981 gagatttggtgtcaatgaatccgttgacacctggcgtcaactgatcctaactatatatatat 22213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 33471087 - 33471152
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||   ||||| |||||||||||||    
T  33471087 ggttgagatttgttgtcaacgaattcgttgacacgtggtgtcaacagatcctaactatatatatat 33471152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 34709033 - 34709078
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  34709033 atggatgagatttggtgccaacgaatccgttgacacctggtgtcaa 34709078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 2313995 - 2313935
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  2313995 agatttggtgtcaatgaatctgttgacacctggtgtcaatggatcctatatatatatatat 2313935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 10554565 - 10554509
Alignment:
Q  193 tggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  10554565 tggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatat 10554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 19360481 - 19360529
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  19360481 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgact 19360529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 25858257 - 25858197
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||| ||||||| | |||| |||| ||||||||||    
T  25858257 gatttggtgtcaacgaatccgttgacacctagtgtcaacggatcccgactcatatatatat 25858197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 38056847 - 38056804
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  38056847 ggttgaaatttggtgtcaaccaatccgttgacacctggtgtcaa 38056804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 27363770 - 27363812
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgt 223  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  27363770 atggttggaatttggtgtcaacgaatccgttgacacctggtgt 27363812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 1283533 - 1283566
Alignment:
Q  193 tggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||||||||    
T  1283533 tggtgtcaacgaatccgttgacacctggtgtcaa 1283566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 9407298 - 9407261
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtca 225  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9407298 agatttggtgtcaacgaatccgttgacacttggtgtca 9407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 22799763 - 22799824
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac-tatatatatat 248  Q
    ||||||||||||||||||| | ||||||||||||||||| | || ||||| |||||||||||    
T  22799763 agatttggtgtcaacgaattcattgacacctggtgtcaacggattctgacttatatatatat 22799824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 36038750 - 36038705
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||    
T  36038750 atggatgagatttggtgttaacgaatccgttgatacctggtgtcaa 36038705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 20854903 - 20854946
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||||||||||||||||||| || ||||||||||||||    
T  20854903 ggttcagatttggtgtcaacgaatccattaacacctggtgtcaa 20854946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 219
Target Start/End: Complemental strand, 22798949 - 22798918
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctg 219  Q
    ||||||||||||||||||||||||||||||||    
T  22798949 agatttggtgtcaacgaatccgttgacacctg 22798918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 34600829 - 34600872
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||    
T  34600829 ggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaa 34600872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 38057599 - 38057658
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||| ||||||||||||||| ||||||| | ||||| | | |||||||||    
T  38057599 gatttggtgtcaaccaatccgttgacacctagtgtcaacggatcctaattctatatatat 38057658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 43510287 - 43510220
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||| ||||||||| |||||||| |||||||||||||||||| | ||||| ||| ||| |||||    
T  43510287 atggatgaaatttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactctatctatat 43510220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 217
Target Start/End: Complemental strand, 1281977 - 1281948
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacc 217  Q
    ||||||||||||||||||||||||||||||    
T  1281977 agatttggtgtcaacgaatccgttgacacc 1281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 13306265 - 13306322
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||| |||||| ||||||||||| |||||||| | |||||||| | |||||||||    
T  13306265 atggttgtgatttgatgtcaacgaattcgttgacatcaggtgtcaacggatcctgact 13306322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 38056155 - 38056122
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacac 216  Q
    |||||||||||||| |||||||||||||||||||    
T  38056155 ggttgagatttggtatcaacgaatccgttgacac 38056122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 38576295 - 38576366
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  38576295 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatat 38576366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 41974696 - 41974628
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  41974696 atggctgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 41974628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 31642085 - 31642151
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||    
T  31642085 ggttgagatttggtgtcaacgaattcgttgacatctggtgtcaatggatcctgactcatatatatat 31642151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 37025062 - 37024995
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| | ||||| |||||||||||||    
T  37025062 gatggttgagatttggtgtcaacgaatctgttgaca-ctggtgtcaacggatcctaactatatatatat 37024995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 8304331 - 8304394
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||| |||||||||||||||||||| |  ||||||||||||||||| |||||||||||||    
T  8304331 ttgagattaggtgtcaacgaatccgttgatatttggtgtcaatgaatcctaactatatatatat 8304394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 8996967 - 8997038
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| |||| | ||||||||| ||||||||||    
T  8996967 ttgatggttgagatttggtgtcaacaaatcagttgacacctggtatcaacggatcctgactcatatatatat 8997038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 31641565 - 31641510
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  31641565 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgact 31641510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 37064875 - 37064805
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||| ||||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||    
T  37064875 ttgacggttgtgatttggtgtcaatgaattcgttgacacctggtgtcaacagatcctgactatatatatat 37064805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 3165125 - 3165186
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactcatatatatat 3165186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 37732872 - 37732815
Alignment:
Q  191 tttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||    
T  37732872 tttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactctatatatat 37732815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 9197824 - 9197883
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||| ||||||||| ||||||||| | ||||||||| |||||||||    
T  9197824 gatttggtgtcaacgaattcgttgacacttggtgtcaacggatcctgactctatatatat 9197883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 31602070 - 31602027
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  31602070 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaa 31602027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 11686275 - 11686229
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11686275 agatttggtgtcaacgaatccgttgacacctggtgccaatggatcct 11686229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 32414527 - 32414565
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32414527 agatttggtgtcaacgaatccgttgacacctggtgtcaa 32414565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 39778966 - 39778917
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  39778966 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 39778917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 39779845 - 39779894
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  39779845 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 39779894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 8373698 - 8373746
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  8373698 atttggtgtcaacgaatccgttgacacttggtgtcaacggatcctgact 8373746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 9197143 - 9197083
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||| ||||||||||||||||||| | || |||||| ||||||||||    
T  9197143 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcatatatatat 9197083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 28929894 - 28929854
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatg 228  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  28929894 agatttggtgtcaacgaatccgttgacatctggtgtcaatg 28929854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 17725658 - 17725717
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||| |||||||||||| |||||| | |||||| || |||||||||    
T  17725658 gatttggtgtcaacgaattcgttgacacctgctgtcaacggatcctgtctctatatatat 17725717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 26654376 - 26654419
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  26654376 ggttaagatttggtgtcaacgaatccattgacacctggtgtcaa 26654419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 22320423 - 22320373
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||||||||||||||||||||  |||| | |||||||||    
T  22320423 agatttggtgtcaacgaatccgttgacacctggcatcaacggatcctgact 22320373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 8372960 - 8372915
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||    
T  8372960 atttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 26652341 - 26652292
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| ||||||| ||||||||||||||||||| | |||||||||    
T  26652341 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgact 26652292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 27441522 - 27441477
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  27441522 atggttaagatttgatgtcaacgaattcgttgacacctggtgtcaa 27441477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 8298301 - 8298265
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctg 219  Q
    ||||||||||||||||||||||||||||| |||||||    
T  8298301 ggttgagatttggtgtcaacgaatccgttaacacctg 8298265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 27442145 - 27442205
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||| |||| || ||||||||||||||||||| | ||||||||| ||||||||||    
T  27442145 gatttggtgttaacggattcgttgacacctggtgtcaacggatcctgactcatatatatat 27442205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 39860161 - 39860098
Alignment:
Q  188 agatttggtgtcaacgaatcc--gttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||  |||||||||||||||||| | |||||| || ||||||||||    
T  39860161 agatttggtgtcaacgaatccttgttgacacctggtgtcaacggatcctgcctcatatatatat 39860098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 11686962 - 11687005
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||    
T  11686962 ggttgagatttagtgtcaacgaattcgttgacaccaggtgtcaa 11687005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 38628304 - 38628261
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||    
T  38628304 ggttaagattttgtgtcaacgaatccgttgatacctggtgtcaa 38628261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 45918 - 45984
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac-tatatatatat 248  Q
    |||||| ||||||||||||||||| | ||||||||||||| ||| | |||||| | |||||||||||    
T  45918 ggttgatatttggtgtcaacgaattcattgacacctggtgccaacggatcctgtcatatatatatat 45984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 3043970 - 3044004
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtc 224  Q
    ||||||||||||||||| |||||||||||||||||    
T  3043970 atttggtgtcaacgaattcgttgacacctggtgtc 3044004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 3417414 - 3417345
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||| ||||||||||||||||||| |||| ||||| | ||||||   ||||||||| ||||||||||    
T  3417414 gatggttaagatttggtgtcaacgaattcgttaacaccagatgtcaacagatcctgactcatatatatat 3417345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 14825691 - 14825654
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  14825691 gatttgatgtcaacgaatccgttgacacctagtgtcaa 14825654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 17724813 - 17724776
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  17724813 gatttggtgtcaacgaatctgttgacaccaggtgtcaa 17724776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 32979828 - 32979877
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| ||| ||| ||||||||||||||||||| | |||||||||    
T  32979828 gatttggtgttaacaaattcgttgacacctggtgtcaacggatcctgact 32979877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 37733599 - 37733632
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacc 217  Q
    |||||||||||||||||||||| |||||||||||    
T  37733599 gttgagatttggtgtcaacgaacccgttgacacc 37733632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 15198295 - 15198343
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||| ||| |||||||||| |||||||| | |||||||||    
T  15198295 atttggtgtcaacaaattcgttgacaccaggtgtcaaaggatcctgact 15198343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 39860870 - 39860938
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac-tatatatatat 248  Q
    |||| ||||||||||||||||   | |||||||||||||||||||| | |||||| | |||||||||||    
T  39860870 atggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcctgtcttatatatatat 39860938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 25468563 - 25468497
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25468563 ggttgagatttggtgtcaatgaatccgttgacacctggtgtcaatggatcctgactcatatatatat 25468497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 25469085 - 25469150
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  25469085 ggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatatat 25469150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 19172580 - 19172639
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatata 247  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcatatatata 19172639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 30932792 - 30932859
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | ||||| ||| |||||||||    
T  30932792 atggttgagatttggtgccaacgaatccgttgacacctggtgtcaacggatcctcactctatatatat 30932859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 49680869 - 49680798
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  49680869 ttgatggatgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatatat 49680798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 28181586 - 28181521
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||| |||||||||| |||||||| | ||||| |||||||||||||    
T  28181586 ggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctcactatatatatat 28181521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 8987845 - 8987777
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||| ||||||||||    
T  8987845 atggttgagatttggtgtcaacgaatccgttgacacctgatgtcaaccgatcctgactcatatatatat 8987777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 11704805 - 11704873
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||    
T  11704805 atggatgagatttggtgtcaacgaatccgttgacacttggtgtcaatggatcctaactcatatatatat 11704873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 34309229 - 34309281
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  34309229 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 34309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 46909358 - 46909426
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||| ||||||||||||| ||||| ||||||| |||||||||| | |||||||||||||||||||    
T  46909358 gatggttgtgatttggtgtcaatgaatctgttgacatctggtgtcaacggatcctgactatatatatat 46909426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 13263515 - 13263570
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  13263515 ggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgact 13263570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 30663411 - 30663356
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  30663411 ggttgagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctgact 30663356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 30663975 - 30664030
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  30663975 ggttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgact 30664030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 7406298 - 7406232
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||| |||| |||||||||||||| | ||||||||| ||||||||||    
T  7406298 ggttgagatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctgactcatatatatat 7406232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 36689071 - 36689129
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  36689071 attttgtgtcaacggattcgttaacacctggtgtcaatgaatcctgactatatatatat 36689129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 36705171 - 36705229
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  36705171 attttgtgtcaacggattcgttaacacctggtgtcaatgaatcctgactatatatatat 36705229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 47967910 - 47967864
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  47967910 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 47967864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 4433848 - 4433889
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4433848 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 4433889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 24992017 - 24991972
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  24992017 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcct 24991972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 36389824 - 36389763
Alignment:
Q  187 gagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||| | |||||||||||||| |||||||| | |||||||||||||||||||    
T  36389824 gagatttggtgtcagcaaatccgttgacaccaggtgtcaacggatcctgactatatatatat 36389763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 46812186 - 46812235
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatc 232  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  46812186 ggttgagatttggtgtcaacgaatccgttgacacctggtgttaacgaatc 46812235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 7559196 - 7559264
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| | |||||| || ||||||||||    
T  7559196 atggatgagatttggtgtcaacggatccgttgacacctggtgtcaacggatcctgtctcatatatatat 7559264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 10121551 - 10121594
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  10121551 ggttgagatttggtgtcaaccaatccgttgacacctggtgtcaa 10121594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 12761501 - 12761560
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||| ||||||| ||||||||||||||| ||||| ||||| |||||||||||||    
T  12761501 gatttggtgttaacgaattcgttgacacctggtgccaatggatcctaactatatatatat 12761560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 13262886 - 13262843
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  13262886 ggttgagatttggtgtcaacgaattcgttgacacctggtgtcaa 13262843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 26118716 - 26118661
Alignment:
Q  193 tggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||| |||||||||||| |||||||||| | |||||||||||||||||||    
T  26118716 tggtgtcaacaaatccgttgacatctggtgtcaacggatcctgactatatatatat 26118661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 37852570 - 37852511
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||| ||||||| |||||||||| |||||||| | |||||||||||||||||||    
T  37852570 gatttggtgttaacgaattcgttgacaccaggtgtcaacggatcctgactatatatatat 37852511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 8988547 - 8988589
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtca 225  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  8988547 ggttgagatttggtgtcaaggaatccgttgacacctggtgtca 8988589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 27256711 - 27256777
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | |||||| || ||||||||||    
T  27256711 ggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctcatatatatat 27256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 30931944 - 30931898
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  30931944 gatggttaagatttggtgttaacgaatccgttgacacctggtgtcaa 30931898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 4439207 - 4439248
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  4439207 ttgagatttggtgtcaacgaatccgttgacaccaggtgtcaa 4439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 28182071 - 28182140
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatattga 251  Q
    |||| |||||||||||||| ||||||||||||||||||||||||   ||||| ||| |||||||||||||    
T  28182071 ggttaagatttggtgtcaaagaatccgttgacacctggtgtcaacagatcctcactcatatatatattga 28182140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 34308526 - 34308474
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctg 235  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | ||||||    
T  34308526 ggttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 34308474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 37577651 - 37577695
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  37577651 atttggtgtcaacgaatccgttgacacctggtatcaatggatcct 37577695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 49681669 - 49681737
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||| || |||||| | |||||||||| | |||||| || |||||||||    
T  49681669 gatggttgagatttggtgtcaacggattcgttgatatctggtgtcaacggatcctgtctctatatatat 49681737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 168943 - 168900
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  168943 ggttgagatttggtgtcaatgaatccgctgacacctggtgtcaa 168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 7558504 - 7558437
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||||| | |||||  || |||||||||    
T  7558504 atggatgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatcctatctctatatatat 7558437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 11548851 - 11548800
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctga 236  Q
    ||||||||| ||||||||||||| |||||||||||||||||| | |||||||    
T  11548851 ttgagatttagtgtcaacgaatctgttgacacctggtgtcaacggatcctga 11548800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 13142673 - 13142732
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||    
T  13142673 atttagtgtcaacgaatccgttgacacctggtgtcaagggatcctaactcatatatatat 13142732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 19171825 - 19171766
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||||||| || |||||| | |||| |||| |||||||||    
T  19171825 gatttggtgtcaacgaatccgttgacacttgatgtcaacggatcccgactctatatatat 19171766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 32038530 - 32038487
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  32038530 ggttgagatttggtgtcaacgaattcgttgacacctggtatcaa 32038487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 37853141 - 37853200
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||||||||||||||||| ||| || | ||||||||| ||||||||||    
T  37853141 atttggtgtcaacgaatccgttgacacctgatgttaacggatcctgactcatatatatat 37853200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 46391872 - 46391931
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||| || ||||||||||    
T  46391872 atttgatgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatatat 46391931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 17171977 - 17171919
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||  || |||||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctctatatatat 17171919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 23026635 - 23026593
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||| |||||||||||||||||||||||| ||||||    
T  23026635 gttgagatttgatgtcaacgaatccgttgacacctgatgtcaa 23026593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 24992748 - 24992794
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||| |||||||||||||||||||||||||||||| || |||||    
T  24992748 agatttgatgtcaacgaatccgttgacacctggtgtcagtggatcct 24992794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 45818067 - 45818009
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||| |||||||||||||||||||||||| | ||| | ||| |||||||||    
T  45818067 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcttaactctatatatat 45818009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 169624 - 169669
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||    
T  169624 atggttgagatttggtgtcaataaattcgttgacacctggtgtcaa 169669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 10120830 - 10120793
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||| |||||||||||||||||||||||    
T  10120830 gatttggtgtcaaccaatccgttgacacctggtgtcaa 10120793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 17172667 - 17172704
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17172667 gatttggcgtcaacgaatccgttgacacctggtgtcaa 17172704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 7407008 - 7407056
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgac 237  Q
    ||||| ||||||||||||| ||||||||||| |||||| ||||||||||    
T  7407008 gatttagtgtcaacgaatctgttgacacctgatgtcaacgaatcctgac 7407056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 36390372 - 36390432
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||| || ||||||||||||||||||| | ||||| ||| ||||||||||    
T  36390372 gatttggtgtcaacggattcgttgacacctggtgtcaacggatcctaactcatatatatat 36390432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 27789948 - 27789905
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||    
T  27789948 ggttgagatttgatgtcaacgaatcggttaacacctggtgtcaa 27789905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 9778968 - 9779026
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||| |||||||||||||||   ||||||||||||| |||||||| | |||||||||    
T  9778968 gatggtggagatttggtgtcaaactatccgttgacaccaggtgtcaacggatcctgact 9779026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 49453199 - 49453233
Alignment:
Q  182 tggttgagatttggtgtcaacgaatccgttgacac 216  Q
    |||||||||||||||||||||||||| ||||||||    
T  49453199 tggttgagatttggtgtcaacgaatctgttgacac 49453233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 50271787 - 50271837
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||| | |||| |||||||||||| | |||||||||    
T  50271787 agatttggtgtcaacgaattcattgatacctggtgtcaacggatcctgact 50271837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 4135538 - 4135579
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctg 219  Q
    ||||||||| |||||||||||||||||||  |||||||||||    
T  4135538 ttgatggttaagatttggtgtcaacgaatatgttgacacctg 4135579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 9778282 - 9778225
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||| |||||| |||||||||||||||||| ||||| |||||  | |||||||||    
T  9778282 atggttgggatttgatgtcaacgaatccgttgatacctgatgtcagcggatcctgact 9778225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 25671217 - 25671168
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||||||||| |||||||||||| ||||| |||||||| | |||||||||    
T  25671217 gatttggtgttaacgaatccgttaacaccaggtgtcaacggatcctgact 25671168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 25733177 - 25733222
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||    
T  25733177 atggttgagatttgatgttaacgaatccgttgatacctgatgtcaa 25733222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 25672028 - 25672084
Alignment:
Q  188 agatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatat 244  Q
    |||||| |||||||||||||  ||||||| ||||||||| | ||||||||| |||||    
T  25672028 agatttagtgtcaacgaatctattgacacttggtgtcaacggatcctgactctatat 25672084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 27790713 - 27790757
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    |||||||||||||  ||||||||||||||||||| |||| |||||    
T  27790713 atttggtgtcaacctatccgttgacacctggtgttaatggatcct 27790757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 26648 - 26579
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  26648 gatggttgtgatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatatat 26579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 802 - 738
Alignment:
Q  185 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  802 ttgagatttggtgtcaacgaatccgttgaaacctggtgtcaatggatcctgactcatatatatat 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 15852 - 15900
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15852 ttgatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaa 15900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 22076 - 22134
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||    
T  22076 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctctatatatat 22134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 15140 - 15080
Alignment:
Q  178 ttgatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    |||| ||||||||||||||||||| ||||||||||||||  |||||||| | |||||||||    
T  15140 ttgacggttgagatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgact 15080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 15076 - 15021
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact 238  Q
    ||||||||||||||||||| ||||||||||||||  |||||||| | |||||||||    
T  15076 ggttgagatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgact 15021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 21535 - 21501
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacc 217  Q
    |||||||||||||||||||||||| ||||||||||    
T  21535 ggttgagatttggtgtcaacgaattcgttgacacc 21501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 23727 - 23778
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcct 234  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  23727 ggttgagatttggtgtcaacgaatccgttgacaactggtgtcaatggatcct 23778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 8290 - 8356
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||| ||||||||||    
T  8290 ggttgagatttggtgttaacgaatacgttgacacctggtgtcaatggatcctaactcatatatatat 8356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 428900 - 428965
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||||||||||||| |||||| ||| |||||||| | ||||||||| |||||||||    
T  428900 ggttgagatttggtgtcaacgaattcgttgataccgggtgtcaacggatcctgactctatatatat 428965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 5385 - 5444
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcctgactcatatatatat 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 39942 - 39883
Alignment:
Q  190 atttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    ||||||||||||||||||||||||||||||||||||| | || |||||| ||||||||||    
T  39942 atttggtgtcaacgaatccgttgacacctggtgtcaacggattctgactcatatatatat 39883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 1640 - 1575
Alignment:
Q  183 ggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    ||||| |||||||||||||||||| |||||||||||||||||||   ||||||  |||||||||||    
T  1640 ggttgggatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctgtatatatatatat 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 6881 - 6949
Alignment:
Q  181 atggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||| |||| ||||||||||||||||  |||||||||||||||||| | ||||||||| ||||||||||    
T  6881 atggctgaggtttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcatatatatat 6949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 180888 - 180829
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgact-atatatatat 248  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  180888 gatttggtgttaacgaatccgttgacacct-gtgtcaacgaatcctgactcatatatatat 180829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 181066 - 181020
Alignment:
Q  180 gatggttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||    
T  181066 gatggttgtggttttgtgtcaacgaatccgttgacacctggtgtcaa 181020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 11718 - 11659
Alignment:
Q  189 gatttggtgtcaacgaatccgttgacacctggtgtcaatgaatcctgactatatatatat 248  Q
    |||||||||||||| ||| |||||| | ||| |||||| | |||||||||||||||||||    
T  11718 gatttggtgtcaactaattcgttgaaatctgatgtcaacggatcctgactatatatatat 11659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 1948 - 1906
Alignment:
Q  184 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaa 226  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||    
T  1948 gttgtgatttggtgtcaacgaatccgttgacatctgctgtcaa 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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