View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16364_high_8 (Length: 306)

Name: NF16364_high_8
Description: NF16364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16364_high_8
NF16364_high_8
[»] chr5 (43 HSPs)
chr5 (4-296)||(3672376-3672667)
chr5 (4-215)||(21392654-21392864)
chr5 (4-215)||(23453410-23453625)
chr5 (4-215)||(23464915-23465130)
chr5 (92-296)||(5452353-5452556)
chr5 (4-217)||(19404039-19404255)
chr5 (4-216)||(24184698-24184914)
chr5 (4-217)||(11338351-11338567)
chr5 (49-215)||(23460654-23460822)
chr5 (169-296)||(11964389-11964518)
chr5 (24-215)||(21652907-21653096)
chr5 (174-296)||(20455700-20455824)
chr5 (169-294)||(19860679-19860803)
chr5 (169-294)||(21615458-21615582)
chr5 (169-296)||(24227065-24227191)
chr5 (194-296)||(5623049-5623152)
chr5 (4-214)||(28258051-28258276)
chr5 (191-277)||(29912548-29912634)
chr5 (4-125)||(5452303-5452427)
chr5 (191-296)||(23412397-23412502)
chr5 (191-277)||(24082605-24082691)
chr5 (191-288)||(26561404-26561502)
chr5 (29-110)||(18779615-18779696)
chr5 (29-125)||(1170164-1170259)
chr5 (29-125)||(24470866-24470961)
chr5 (191-288)||(6455161-6455259)
chr5 (29-110)||(7424254-7424335)
chr5 (160-211)||(1170310-1170361)
chr5 (4-110)||(25192600-25192700)
chr5 (29-70)||(17473392-17473433)
chr5 (169-233)||(23492509-23492573)
chr5 (164-214)||(11582371-11582421)
chr5 (169-214)||(13793655-13793700)
chr5 (169-214)||(21661316-21661361)
chr5 (169-214)||(27185426-27185471)
chr5 (169-233)||(7727084-7727148)
chr5 (170-210)||(24470765-24470805)
chr5 (4-86)||(23510589-23510666)
chr5 (169-210)||(4863794-4863835)
chr5 (169-210)||(32967770-32967811)
chr5 (169-214)||(37189726-37189771)
chr5 (31-83)||(1170262-1170314)
chr5 (31-83)||(11582478-11582530)
[»] chr6 (44 HSPs)
chr6 (4-208)||(18397397-18397605)
chr6 (4-216)||(13016270-13016481)
chr6 (4-217)||(22866631-22866847)
chr6 (170-296)||(19852714-19852840)
chr6 (4-215)||(25368845-25369058)
chr6 (4-215)||(28196268-28196483)
chr6 (174-296)||(23220142-23220263)
chr6 (47-215)||(18422259-18422427)
chr6 (170-294)||(16134725-16134849)
chr6 (4-149)||(25646312-25646456)
chr6 (4-147)||(32897258-32897402)
chr6 (4-215)||(15738713-15738927)
chr6 (169-289)||(21930343-21930464)
chr6 (169-296)||(34965387-34965516)
chr6 (63-214)||(25646411-25646561)
chr6 (169-296)||(22846570-22846696)
chr6 (4-110)||(13622599-13622705)
chr6 (191-288)||(15006267-15006365)
chr6 (8-110)||(15736670-15736772)
chr6 (193-296)||(22467725-22467829)
chr6 (242-296)||(12310675-12310729)
chr6 (29-110)||(18088214-18088295)
chr6 (29-110)||(19609078-19609159)
chr6 (4-110)||(18843304-18843404)
chr6 (191-274)||(29604062-29604144)
chr6 (4-110)||(18004458-18004558)
chr6 (164-214)||(35017296-35017346)
chr6 (29-70)||(18741070-18741111)
chr6 (169-214)||(31626964-31627009)
chr6 (5-60)||(18431256-18431311)
chr6 (31-110)||(18825265-18825343)
chr6 (169-214)||(18383282-18383327)
chr6 (169-214)||(22428701-22428746)
chr6 (191-271)||(32350575-32350656)
chr6 (170-214)||(25745897-25745941)
chr6 (169-233)||(33323319-33323383)
chr6 (191-277)||(33539819-33539905)
chr6 (169-214)||(16105084-16105129)
chr6 (29-70)||(17343786-17343827)
chr6 (169-214)||(18775737-18775782)
chr6 (29-70)||(22227143-22227184)
chr6 (52-113)||(25646440-25646501)
chr6 (29-70)||(35017184-35017225)
chr6 (169-233)||(16889344-16889408)
[»] chr4 (46 HSPs)
chr4 (4-296)||(15043319-15043613)
chr4 (4-296)||(15110811-15111105)
chr4 (4-215)||(13811116-13811331)
chr4 (4-214)||(30235977-30236190)
chr4 (4-214)||(18495893-18496108)
chr4 (4-214)||(44054384-44054595)
chr4 (4-215)||(45460442-45460655)
chr4 (170-296)||(50223761-50223887)
chr4 (4-214)||(44345290-44345500)
chr4 (47-215)||(33738687-33738855)
chr4 (171-296)||(10239037-10239162)
chr4 (10-215)||(52266961-52267169)
chr4 (4-215)||(43282873-43283087)
chr4 (170-296)||(17377039-17377165)
chr4 (170-296)||(47469936-47470062)
chr4 (170-293)||(41257951-41258073)
chr4 (4-149)||(33738794-33738938)
chr4 (170-296)||(5372297-5372425)
chr4 (170-296)||(54365173-54365300)
chr4 (191-296)||(49070263-49070369)
chr4 (191-296)||(12732621-12732727)
chr4 (191-281)||(19557797-19557887)
chr4 (140-216)||(16395671-16395747)
chr4 (29-128)||(15288511-15288610)
chr4 (191-277)||(38763276-38763363)
chr4 (4-110)||(9294098-9294198)
chr4 (29-110)||(15295621-15295702)
chr4 (29-149)||(13244988-13245107)
chr4 (169-215)||(14900001-14900047)
chr4 (164-214)||(16366354-16366404)
chr4 (4-110)||(18167367-18167467)
chr4 (164-214)||(53909424-53909474)
chr4 (164-215)||(53706458-53706509)
chr4 (169-215)||(12837920-12837966)
chr4 (169-214)||(12245854-12245899)
chr4 (169-214)||(12901365-12901410)
chr4 (169-214)||(15852918-15852963)
chr4 (169-214)||(21961161-21961206)
chr4 (259-296)||(42707152-42707189)
chr4 (4-73)||(13751779-13751850)
chr4 (29-85)||(53909273-53909329)
chr4 (31-110)||(10642760-10642838)
chr4 (191-268)||(7187539-7187616)
chr4 (169-214)||(8874086-8874131)
chr4 (169-210)||(34197767-34197808)
chr4 (169-205)||(27959563-27959599)
[»] chr2 (36 HSPs)
chr2 (4-216)||(22691436-22691652)
chr2 (4-216)||(22696083-22696299)
chr2 (4-216)||(4449715-4449930)
chr2 (4-216)||(22581420-22581633)
chr2 (4-214)||(36892195-36892403)
chr2 (4-216)||(269646-269861)
chr2 (4-217)||(28972497-28972714)
chr2 (4-215)||(31661-31876)
chr2 (5-215)||(7319945-7320160)
chr2 (4-215)||(24572878-24573094)
chr2 (4-214)||(25877453-25877661)
chr2 (48-282)||(720827-721057)
chr2 (169-296)||(19658389-19658516)
chr2 (170-296)||(24272499-24272624)
chr2 (170-296)||(18534266-18534395)
chr2 (4-149)||(720996-721144)
chr2 (169-293)||(43641270-43641393)
chr2 (191-296)||(20271828-20271935)
chr2 (169-296)||(19435066-19435189)
chr2 (5-110)||(24966865-24966970)
chr2 (4-147)||(22787524-22787669)
chr2 (191-288)||(25132665-25132763)
chr2 (170-291)||(22137424-22137542)
chr2 (169-214)||(25600482-25600527)
chr2 (172-215)||(24088972-24089015)
chr2 (29-69)||(9654331-9654371)
chr2 (169-214)||(4884-4929)
chr2 (29-110)||(20628896-20628977)
chr2 (169-214)||(22862009-22862054)
chr2 (169-214)||(23823116-23823161)
chr2 (169-214)||(23825060-23825105)
chr2 (169-214)||(23832195-23832240)
chr2 (169-214)||(24296180-24296225)
chr2 (169-214)||(25304090-25304135)
chr2 (29-110)||(461314-461394)
chr2 (191-283)||(19660821-19660912)
[»] chr7 (53 HSPs)
chr7 (4-213)||(142094-142303)
chr7 (4-215)||(10862345-10862559)
chr7 (170-296)||(8565177-8565303)
chr7 (4-215)||(15629231-15629446)
chr7 (50-215)||(15823984-15824148)
chr7 (47-215)||(44863667-44863835)
chr7 (4-215)||(12249601-12249815)
chr7 (4-215)||(16571581-16571795)
chr7 (4-215)||(16593867-16594081)
chr7 (4-215)||(49049290-49049496)
chr7 (4-215)||(13273203-13273418)
chr7 (47-215)||(47288200-47288368)
chr7 (4-149)||(15823898-15824042)
chr7 (170-296)||(9322663-9322789)
chr7 (4-214)||(11285672-11285887)
chr7 (169-296)||(4483185-4483314)
chr7 (4-149)||(18305290-18305434)
chr7 (4-145)||(47288311-47288451)
chr7 (170-296)||(28718895-28719022)
chr7 (169-294)||(9058230-9058354)
chr7 (4-121)||(13867562-13867679)
chr7 (171-277)||(20587210-20587316)
chr7 (4-149)||(44863774-44863919)
chr7 (169-296)||(21676631-21676759)
chr7 (4-149)||(12545200-12545343)
chr7 (47-214)||(12545283-12545448)
chr7 (191-277)||(16382059-16382145)
chr7 (192-292)||(15979707-15979808)
chr7 (191-277)||(14939276-14939362)
chr7 (191-277)||(15366869-15366955)
chr7 (191-296)||(33558170-33558276)
chr7 (29-110)||(2192201-2192281)
chr7 (191-296)||(4437322-4437432)
chr7 (191-296)||(4444723-4444833)
chr7 (29-149)||(13038610-13038729)
chr7 (99-215)||(13867617-13867732)
chr7 (29-110)||(16480440-16480521)
chr7 (29-110)||(18981411-18981492)
chr7 (4-110)||(7291430-7291530)
chr7 (29-110)||(15925945-15926026)
chr7 (29-70)||(11582346-11582387)
chr7 (169-214)||(12753405-12753450)
chr7 (29-85)||(36051267-36051323)
chr7 (169-215)||(26071861-26071907)
chr7 (169-215)||(26095648-26095694)
chr7 (169-214)||(3893619-3893664)
chr7 (169-214)||(13388489-13388534)
chr7 (29-70)||(16210398-16210439)
chr7 (169-214)||(13376196-13376241)
chr7 (169-210)||(15914030-15914071)
chr7 (259-292)||(16382010-16382043)
chr7 (169-214)||(45453850-45453895)
chr7 (173-213)||(112899-112939)
[»] chr1 (45 HSPs)
chr1 (4-215)||(49966107-49966321)
chr1 (4-216)||(35523911-35524127)
chr1 (4-216)||(21716662-21716878)
chr1 (4-215)||(51657815-51658030)
chr1 (4-214)||(27673312-27673525)
chr1 (4-215)||(20956457-20956671)
chr1 (4-215)||(22836741-22836955)
chr1 (4-214)||(2422568-2422776)
chr1 (64-215)||(22407788-22407938)
chr1 (170-280)||(5769813-5769923)
chr1 (170-296)||(5471983-5472109)
chr1 (169-296)||(77630-77758)
chr1 (4-149)||(22407686-22407832)
chr1 (170-294)||(41213266-41213390)
chr1 (170-296)||(20821392-20821521)
chr1 (169-294)||(37235559-37235683)
chr1 (170-292)||(22144991-22145110)
chr1 (191-296)||(40437904-40438010)
chr1 (169-296)||(21193609-21193735)
chr1 (4-70)||(2422462-2422528)
chr1 (31-125)||(22250465-22250558)
chr1 (191-277)||(49998933-49999019)
chr1 (29-110)||(22365329-22365409)
chr1 (29-110)||(21651444-21651525)
chr1 (191-277)||(52398150-52398236)
chr1 (29-86)||(18505954-18506011)
chr1 (29-125)||(9785742-9785837)
chr1 (31-70)||(18505874-18505913)
chr1 (218-277)||(29217595-29217654)
chr1 (164-214)||(9785892-9785942)
chr1 (29-86)||(41210643-41210700)
chr1 (164-212)||(18505814-18505862)
chr1 (39-86)||(20895201-20895248)
chr1 (164-214)||(20895383-20895433)
chr1 (169-210)||(5676199-5676240)
chr1 (169-214)||(35053362-35053407)
chr1 (171-214)||(38035221-38035264)
chr1 (172-214)||(36357938-36357980)
chr1 (191-265)||(46144277-46144351)
chr1 (169-214)||(13378359-13378404)
chr1 (169-214)||(19601704-19601749)
chr1 (169-214)||(20444267-20444312)
chr1 (29-62)||(21858178-21858211)
chr1 (169-214)||(37846064-37846109)
chr1 (169-209)||(41217978-41218018)
[»] chr3 (67 HSPs)
chr3 (4-296)||(12951431-12951725)
chr3 (4-215)||(16183499-16183709)
chr3 (4-213)||(17137927-17138139)
chr3 (4-215)||(14287552-14287767)
chr3 (4-216)||(53900006-53900222)
chr3 (26-214)||(6148314-6148500)
chr3 (4-215)||(11062521-11062735)
chr3 (4-216)||(14296955-14297171)
chr3 (4-216)||(14302582-14302798)
chr3 (4-216)||(35122144-35122360)
chr3 (4-215)||(11883753-11883967)
chr3 (4-215)||(12562965-12563180)
chr3 (4-149)||(17099243-17099387)
chr3 (4-215)||(40938190-40938404)
chr3 (46-215)||(14291911-14292082)
chr3 (52-217)||(14522885-14523052)
chr3 (52-215)||(17099137-17099299)
chr3 (4-214)||(39654376-39654589)
chr3 (98-216)||(17536533-17536651)
chr3 (169-296)||(5229675-5229804)
chr3 (4-205)||(30204927-30205127)
chr3 (170-296)||(41660055-41660180)
chr3 (169-296)||(38377413-38377541)
chr3 (48-209)||(15516159-15516321)
chr3 (169-293)||(15989425-15989550)
chr3 (4-149)||(14522793-14522943)
chr3 (4-116)||(22145757-22145868)
chr3 (191-296)||(17320193-17320299)
chr3 (191-296)||(43429153-43429259)
chr3 (194-296)||(21168336-21168439)
chr3 (4-149)||(15516260-15516408)
chr3 (129-217)||(11199103-11199190)
chr3 (169-280)||(38812589-38812699)
chr3 (191-277)||(4147289-4147375)
chr3 (191-277)||(6230255-6230341)
chr3 (29-214)||(19572274-19572473)
chr3 (4-86)||(17523894-17523978)
chr3 (170-233)||(9592349-9592411)
chr3 (170-260)||(33370962-33371051)
chr3 (29-110)||(13816088-13816168)
chr3 (29-110)||(15860649-15860730)
chr3 (169-237)||(47983398-47983464)
chr3 (169-237)||(48011258-48011324)
chr3 (193-277)||(4163833-4163917)
chr3 (191-254)||(14817312-14817375)
chr3 (169-216)||(47992704-47992751)
chr3 (169-216)||(48001991-48002038)
chr3 (164-214)||(11813360-11813410)
chr3 (169-215)||(47786463-47786509)
chr3 (169-214)||(319206-319251)
chr3 (102-214)||(22145814-22145925)
chr3 (169-215)||(7852328-7852374)
chr3 (169-215)||(14060835-14060881)
chr3 (32-110)||(17957842-17957919)
chr3 (4-110)||(25057421-25057521)
chr3 (173-223)||(55442367-55442417)
chr3 (169-214)||(8630368-8630413)
chr3 (4-37)||(14294068-14294101)
chr3 (4-37)||(14299695-14299728)
chr3 (169-214)||(15874686-15874731)
chr3 (169-214)||(48420193-48420238)
chr3 (169-214)||(50113720-50113765)
chr3 (31-70)||(25057364-25057403)
chr3 (164-214)||(17957989-17958039)
chr3 (169-214)||(12351438-12351483)
chr3 (169-214)||(12490331-12490376)
chr3 (169-213)||(51160066-51160110)
[»] scaffold0011 (5 HSPs)
scaffold0011 (4-214)||(256394-256603)
scaffold0011 (36-110)||(193191-193265)
scaffold0011 (36-110)||(76201-76275)
scaffold0011 (29-123)||(124794-124888)
scaffold0011 (49-125)||(124854-124930)
[»] scaffold0103 (1 HSPs)
scaffold0103 (4-216)||(32048-32258)
[»] chr8 (59 HSPs)
chr8 (4-215)||(38532108-38532323)
chr8 (4-217)||(21679660-21679876)
chr8 (4-216)||(28543395-28543611)
chr8 (8-215)||(19994640-19994846)
chr8 (4-215)||(17730949-17731161)
chr8 (170-296)||(22312109-22312235)
chr8 (47-215)||(25120968-25121134)
chr8 (170-296)||(33170704-33170830)
chr8 (4-174)||(20655508-20655682)
chr8 (4-149)||(25121074-25121217)
chr8 (170-294)||(24237985-24238110)
chr8 (173-296)||(11542783-11542906)
chr8 (4-215)||(22737367-22737579)
chr8 (7-215)||(18768254-18768466)
chr8 (170-292)||(33612659-33612779)
chr8 (169-296)||(37655243-37655369)
chr8 (170-296)||(22498901-22499026)
chr8 (170-296)||(45560816-45560945)
chr8 (4-131)||(20648923-20649054)
chr8 (191-292)||(24554191-24554293)
chr8 (4-85)||(20480267-20480348)
chr8 (4-104)||(16416836-16416935)
chr8 (170-291)||(23153407-23153525)
chr8 (169-296)||(25294445-25294568)
chr8 (169-296)||(25756434-25756557)
chr8 (10-98)||(20568758-20568848)
chr8 (10-98)||(20574951-20575041)
chr8 (170-268)||(23116418-23116516)
chr8 (31-126)||(20480170-20480264)
chr8 (4-70)||(22322919-22322985)
chr8 (99-215)||(16416766-16416880)
chr8 (133-214)||(22323064-22323144)
chr8 (92-215)||(20480122-20480243)
chr8 (164-215)||(24719070-24719121)
chr8 (29-128)||(43375083-43375182)
chr8 (169-215)||(41244157-41244203)
chr8 (4-110)||(24108068-24108168)
chr8 (29-70)||(6775733-6775774)
chr8 (169-233)||(21696063-21696127)
chr8 (191-275)||(24266498-24266582)
chr8 (169-233)||(39448419-39448483)
chr8 (190-256)||(7468764-7468831)
chr8 (4-110)||(13664119-13664219)
chr8 (4-110)||(13723394-13723494)
chr8 (4-110)||(22007962-22008062)
chr8 (31-113)||(22323003-22323085)
chr8 (219-292)||(23228947-23229020)
chr8 (29-70)||(24718919-24718960)
chr8 (183-215)||(20655677-20655709)
chr8 (4-110)||(22908967-22909067)
chr8 (263-297)||(23118541-23118575)
chr8 (191-281)||(29296373-29296463)
chr8 (169-214)||(270270-270315)
chr8 (169-214)||(645605-645650)
chr8 (169-214)||(831340-831385)
chr8 (169-214)||(16203921-16203966)
chr8 (169-214)||(21192343-21192388)
chr8 (169-213)||(21199770-21199814)
chr8 (169-205)||(31195881-31195917)
[»] scaffold0001 (1 HSPs)
scaffold0001 (4-210)||(71938-72145)
[»] scaffold0808 (1 HSPs)
scaffold0808 (4-215)||(2955-3169)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-215)||(145389-145603)
[»] scaffold0480 (1 HSPs)
scaffold0480 (4-215)||(6847-7057)
[»] scaffold0673 (2 HSPs)
scaffold0673 (4-168)||(2327-2491)
scaffold0673 (163-215)||(3699-3751)
[»] scaffold0021 (9 HSPs)
scaffold0021 (4-149)||(76915-77059)
scaffold0021 (4-217)||(10122-10339)
scaffold0021 (4-108)||(87013-87117)
scaffold0021 (52-214)||(76810-76971)
scaffold0021 (169-215)||(138404-138450)
scaffold0021 (47-126)||(76857-76936)
scaffold0021 (259-296)||(23767-23804)
scaffold0021 (259-296)||(19503-19540)
scaffold0021 (259-296)||(29079-29116)
[»] scaffold0342 (1 HSPs)
scaffold0342 (4-217)||(4300-4517)
[»] scaffold0004 (2 HSPs)
scaffold0004 (170-296)||(84861-84987)
scaffold0004 (170-296)||(25999-26125)
[»] scaffold0031 (2 HSPs)
scaffold0031 (4-217)||(30536-30751)
scaffold0031 (169-216)||(68848-68895)
[»] scaffold0008 (4 HSPs)
scaffold0008 (62-215)||(21084-21236)
scaffold0008 (4-149)||(21190-21334)
scaffold0008 (4-149)||(28780-28923)
scaffold0008 (62-215)||(28674-28826)
[»] scaffold0359 (2 HSPs)
scaffold0359 (62-215)||(13325-13478)
scaffold0359 (4-149)||(13227-13371)
[»] scaffold0338 (1 HSPs)
scaffold0338 (4-214)||(7255-7468)
[»] scaffold0037 (3 HSPs)
scaffold0037 (4-149)||(26210-26354)
scaffold0037 (52-214)||(26298-26459)
scaffold0037 (47-126)||(26333-26412)
[»] scaffold0692 (1 HSPs)
scaffold0692 (4-214)||(881-1089)
[»] scaffold0022 (4 HSPs)
scaffold0022 (170-296)||(130328-130454)
scaffold0022 (4-215)||(108112-108325)
scaffold0022 (169-233)||(106518-106582)
scaffold0022 (180-216)||(113891-113927)
[»] scaffold0092 (1 HSPs)
scaffold0092 (4-214)||(1879-2093)
[»] scaffold0589 (1 HSPs)
scaffold0589 (5-215)||(6342-6556)
[»] scaffold0003 (1 HSPs)
scaffold0003 (177-296)||(99570-99689)
[»] scaffold0150 (2 HSPs)
scaffold0150 (4-203)||(20172-20373)
scaffold0150 (4-203)||(27001-27202)
[»] scaffold0090 (2 HSPs)
scaffold0090 (4-172)||(6134-6305)
scaffold0090 (225-296)||(6313-6385)
[»] scaffold0601 (1 HSPs)
scaffold0601 (169-296)||(2576-2704)
[»] scaffold0193 (1 HSPs)
scaffold0193 (169-297)||(3198-3325)
[»] scaffold0251 (1 HSPs)
scaffold0251 (4-110)||(15348-15454)
[»] scaffold0057 (1 HSPs)
scaffold0057 (191-296)||(4380-4486)
[»] scaffold0750 (2 HSPs)
scaffold0750 (131-217)||(2799-2884)
scaffold0750 (4-38)||(6822-6856)
[»] scaffold0174 (2 HSPs)
scaffold0174 (184-296)||(21705-21819)
scaffold0174 (191-274)||(1079-1162)
[»] scaffold0124 (2 HSPs)
scaffold0124 (131-217)||(26502-26587)
scaffold0124 (4-135)||(23185-23320)
[»] scaffold0044 (4 HSPs)
scaffold0044 (4-149)||(94852-94996)
scaffold0044 (44-149)||(94812-94916)
scaffold0044 (47-113)||(94767-94833)
scaffold0044 (62-151)||(94770-94858)
[»] scaffold0080 (1 HSPs)
scaffold0080 (169-296)||(25210-25336)
[»] scaffold0331 (1 HSPs)
scaffold0331 (226-296)||(17828-17898)
[»] scaffold0292 (3 HSPs)
scaffold0292 (44-214)||(18108-18277)
scaffold0292 (4-147)||(18215-18357)
scaffold0292 (226-292)||(8634-8699)
[»] scaffold0088 (1 HSPs)
scaffold0088 (191-296)||(45222-45327)
[»] scaffold0253 (2 HSPs)
scaffold0253 (191-277)||(9846-9932)
scaffold0253 (191-277)||(19271-19357)
[»] scaffold0346 (1 HSPs)
scaffold0346 (174-277)||(14215-14318)
[»] scaffold0521 (2 HSPs)
scaffold0521 (99-215)||(7100-7215)
scaffold0521 (4-125)||(7150-7272)
[»] scaffold0390 (1 HSPs)
scaffold0390 (170-291)||(3726-3844)
[»] scaffold0407 (2 HSPs)
scaffold0407 (29-149)||(6111-6230)
scaffold0407 (164-213)||(6303-6352)
[»] scaffold0357 (1 HSPs)
scaffold0357 (191-277)||(6229-6315)
[»] scaffold0786 (2 HSPs)
scaffold0786 (170-291)||(138-256)
scaffold0786 (170-291)||(5193-5311)
[»] scaffold0442 (1 HSPs)
scaffold0442 (218-288)||(1623-1694)
[»] scaffold0219 (1 HSPs)
scaffold0219 (199-277)||(25564-25642)
[»] scaffold0387 (1 HSPs)
scaffold0387 (191-277)||(2554-2640)
[»] scaffold0243 (1 HSPs)
scaffold0243 (169-215)||(3893-3939)
[»] scaffold0028 (3 HSPs)
scaffold0028 (191-289)||(64091-64188)
scaffold0028 (164-214)||(90593-90643)
scaffold0028 (31-110)||(90444-90523)
[»] scaffold0396 (1 HSPs)
scaffold0396 (169-214)||(13788-13833)
[»] scaffold0234 (1 HSPs)
scaffold0234 (29-110)||(19082-19163)
[»] scaffold0032 (1 HSPs)
scaffold0032 (191-291)||(106237-106335)
[»] scaffold0016 (2 HSPs)
scaffold0016 (169-214)||(163858-163903)
scaffold0016 (169-214)||(118203-118248)
[»] scaffold0269 (1 HSPs)
scaffold0269 (164-215)||(3474-3525)
[»] scaffold0190 (1 HSPs)
scaffold0190 (169-216)||(8599-8646)
[»] scaffold0049 (1 HSPs)
scaffold0049 (164-215)||(31046-31097)
[»] scaffold0039 (2 HSPs)
scaffold0039 (164-215)||(20899-20950)
scaffold0039 (29-70)||(20748-20789)
[»] scaffold0622 (1 HSPs)
scaffold0622 (169-215)||(7954-8000)
[»] scaffold0240 (1 HSPs)
scaffold0240 (169-215)||(6068-6114)
[»] scaffold0171 (1 HSPs)
scaffold0171 (164-214)||(31261-31311)
[»] scaffold0116 (1 HSPs)
scaffold0116 (164-214)||(28284-28334)
[»] scaffold2147 (2 HSPs)
scaffold2147 (29-86)||(902-959)
scaffold2147 (164-214)||(759-809)
[»] scaffold0434 (1 HSPs)
scaffold0434 (169-214)||(3182-3227)
[»] scaffold0095 (1 HSPs)
scaffold0095 (169-233)||(7262-7326)
[»] scaffold0395 (1 HSPs)
scaffold0395 (172-215)||(14200-14243)
[»] scaffold0184 (1 HSPs)
scaffold0184 (31-110)||(33927-34005)
[»] scaffold0078 (1 HSPs)
scaffold0078 (31-110)||(38839-38917)
[»] scaffold1140 (1 HSPs)
scaffold1140 (36-70)||(1801-1835)
[»] scaffold0034 (1 HSPs)
scaffold0034 (31-85)||(78096-78150)
[»] scaffold0507 (1 HSPs)
scaffold0507 (169-214)||(4950-4995)
[»] scaffold0462 (1 HSPs)
scaffold0462 (169-214)||(4652-4697)
[»] scaffold0138 (4 HSPs)
scaffold0138 (29-70)||(14767-14808)
scaffold0138 (164-214)||(14999-15049)
scaffold0138 (44-125)||(14862-14943)
scaffold0138 (248-288)||(21674-21714)
[»] scaffold0083 (1 HSPs)
scaffold0083 (169-214)||(12721-12766)
[»] scaffold0068 (1 HSPs)
scaffold0068 (169-214)||(60097-60142)
[»] scaffold0012 (1 HSPs)
scaffold0012 (173-214)||(249140-249181)
[»] scaffold0009 (1 HSPs)
scaffold0009 (169-214)||(236704-236749)
[»] scaffold0218 (1 HSPs)
scaffold0218 (29-85)||(6652-6707)
[»] scaffold0195 (2 HSPs)
scaffold0195 (169-233)||(8248-8312)
scaffold0195 (169-233)||(13637-13701)
[»] scaffold0447 (1 HSPs)
scaffold0447 (169-215)||(3147-3193)
[»] scaffold0383 (1 HSPs)
scaffold0383 (169-215)||(5755-5801)
[»] scaffold0213 (1 HSPs)
scaffold0213 (4-70)||(27636-27697)
[»] scaffold0120 (1 HSPs)
scaffold0120 (169-215)||(27096-27142)
[»] scaffold0106 (1 HSPs)
scaffold0106 (164-214)||(40055-40105)
[»] scaffold0102 (1 HSPs)
scaffold0102 (169-215)||(37984-38030)
[»] scaffold0025 (1 HSPs)
scaffold0025 (169-214)||(145061-145106)
[»] scaffold0327 (1 HSPs)
scaffold0327 (248-288)||(6566-6606)


Alignment Details
Target: chr5 (Bit Score: 148; Significance: 4e-78; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 3672667 - 3672376
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||||||| |||||||||||||||||||||||  |  ||  ||||||||| ||||| |||||||||||| |||||||||||||| || |||||| ||    
T  3672667 catcatagtcgagttgagattttatatgatgtttttgttgcaccattgggctttggccttgcagagatcatttagtgatctagtttgtgggcttcggcct 3672568  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||  |||||||||    
T  3672567 tgcagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctttgatggtctagatataggtgacgaccttgaagtgagttggtaccac 3672469  T
Q  200 atgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||| | | |||  ||||||||    | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3672468 atgcatatatgtgtc-gaactagatgcatatca---agacatgagtcttatttgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 3672376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 21392864 - 21392654
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  21392864 catcatagtcgtgttgagattatatatgatgttttcttcattattgggctccggcctagcagagatcattagtgatctagtttgtggacttcagtcttgc 21392765  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||| | | |||||| ||||| ||||||||||||||| |||| |||||||||||||    
T  21392764 agagatccttagtgatctag-tttgtggacttcagccttgcagagacccttggtggtctggatatcggtgacgaccttgagttgatttggtaccacatgc 21392666  T
Q  204 atatatgtgtcg 215  Q
    ||||||||||||    
T  21392665 atatatgtgtcg 21392654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 23453625 - 23453410
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| || ||||| ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  23453625 catcatagtcgtgttgagattttatatgatgtttttgttgcatgatcgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtc 23453526  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    ||||| |||||| ||||||||||||||| | ||||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  23453525 ttgcaaagatccattagtgatctagatt-gcgggcttcggccttgcagggaccattaatggtctagatataggtgacgaccttgaggtgatatggtacca 23453427  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  23453426 catgcatatatgtgtcg 23453410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 23465130 - 23464915
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| || ||||| ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  23465130 catcatagtcgtgttgagattttatatgatgtttttgttgcatgatcgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtc 23465031  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    ||||| |||||| ||||||||||||||| | ||||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  23465030 ttgcaaagatccattagtgatctagatt-gcgggcttcggccttgcagggaccattaatggtctagatataggtgacgaccttgaggtgatatggtacca 23464932  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  23464931 catgcatatatgtgtcg 23464915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 92 - 296
Target Start/End: Original strand, 5452353 - 5452556
Alignment:
Q  92 cttcggtcttgcagagatcctt-agtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgata 190  Q
    |||||| |||||||||||| || |||||||||| ||||||||||||||||||| ||||||| | | ||||||||||| | |||||||||||||||||||     
T  5452353 cttcggccttgcagagatcatttagtgatctag-tttgtgggcttcggccttgtagagacctttggtggtctagataaatgtgacgaccttgaggtgatt 5452451  T
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtt 290  Q
    |||||||||||||||||||||||| | | |||| ||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5452452 tggtaccacatgcatatatgtgtc-gaactaggtgcatatcatgttgacatgagtcttatttgttgcatgtgaatgatgattgttgatgataagtgtgtt 5452550  T
Q  291 tgatga 296  Q
    | ||||    
T  5452551 taatga 5452556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 19404255 - 19404039
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttgg-ggacttcggtct 100  Q
    ||||||||||||||||| |||||||||||| ||||  |  ||| |||||||| ||||| | ||||||||||| |||||||||||| | ||||||||||||    
T  19404255 catcatagtcgtgttgatattttatatgatatttttgttgcatcattgggctccggcccatcagagatcattggtgatctagttttgtggacttcggtct 19404156  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| || |||||||||||| |||||||||| ||||||||||||| | || |||||||||||||||||| ||||||| |||| ||||||||||    
T  19404155 tgcagagatccattggtgatctagatt-gtgggcttcgaccttgcagagacctttgacggtctagatataggtgacaaccttgaagtgaaatggtaccac 19404057  T
Q  200 atgcatatatgtgtcggg 217  Q
    ||||||||||||||||||    
T  19404056 atgcatatatgtgtcggg 19404039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 24184698 - 24184914
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  24184698 catcatagtcgagttgagatttgataagatgtttttgttgcatctttgggctccggcctagcagagatcatttagtgatctagttttgtggatttcggtc 24184797  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||||||||||||||||||||||||||||||||||  |||||||  |||||| | |  |||||||||||||||||||||||||| |||| ||||||||||    
T  24184798 ttgcagagatccttagtgatctagatttgtgggctctggccttgtcgagacctttggcggtctagatataggtgacgaccttgaagtgaaatggtaccac 24184897  T
Q  200 atgcatatatgtgtcgg 216  Q
    |||||||||||||||||    
T  24184898 atgcatatatgtgtcgg 24184914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 11338351 - 11338567
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattc--attattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||| ||||||||||| ||||||||||||  ||  || ||||| || ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  11338351 catcatagtcatgttgagatttgatatgatgtttttgtcgcatcattggtct-cggcctagcagagatcatttagtgatctagttttgtggacttcggtc 11338449  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||| ||||||||||||||||||||||||||||| || ||||||||||||| | || |||||||||||| ||||||||||||   ||||||||||| ||    
T  11338450 ttgcatagatccttagtgatctagatttgtgggctccgtccttgcagagacctttgacggtctagatataagtgacgaccttggaatgatatggtacaac 11338549  T
Q  200 atgcatatatgtgtcggg 217  Q
    ||||||||| ||||||||    
T  11338550 atgcatatacgtgtcggg 11338567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 23460822 - 23460654
Alignment:
Q  49 gggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtcttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgca 145  Q
    ||||| ||||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  23460822 gggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtcttgcaaagatccattagtgatctagatt-gcgggcttcggccttgca 23460724  T
Q  146 gagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    | |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23460723 gggaccattaatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 23460654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 11964518 - 11964389
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaatt-gttgcatgtgaatga 267  Q
    ||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| |||||| || ||||||||||| ||| |||||||||||    
T  11964518 aggtgacgaccttgaggtggtttggtaccacatgcatgtatgtgtcgggattaggcgcatataatattgacatgagtcttaattggttacatgtgaatga 11964419  T
Q  268 tgattg-ttgatgataagtgtgtttgatga 296  Q
    |||||| |||||||||||||||||||||||    
T  11964418 tgattgtttgatgataagtgtgtttgatga 11964389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 21652907 - 21653096
Alignment:
Q  24 tttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctag 123  Q
    |||||| |||||||||||| |||||||||| |||||||||||||||| || | ||| |||||| ||| |||||| |||||||||||  || | |||||||    
T  21652907 tttatacgatgttttattcgttattgggctccggcctagcagagatcttttgagatatagttttggg-cttcggccttgcagagatattttgagatctag 21653005  T
Q  124 atttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
     ||||||| |||||| |||||||||||| | | |||||| ||||| ||||||||||||||||  || |||||||||||||||||||| ||||    
T  21653006 -tttgtggacttcggtcttgcagagacccttggtggtctggatatgggtgacgaccttgaggacatttggtaccacatgcatatatgcgtcg 21653096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 20455700 - 20455824
Alignment:
Q  174 acgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattg-ttgcatgtgaatgatgat 271  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||| ||||||| |||||||||||| || |||||||||||||||    
T  20455700 acgatcttgaggtgatttggtaccacatgcatatatgtgtcgggaatagccgcatagcataattggcatgagtcttaattgtttacatgtgaatgatgat 20455799  T
Q  272 tgttgatgataagtgtgtttgatga 296  Q
    | |||||||||||||||||||||||    
T  20455800 ttttgatgataagtgtgtttgatga 20455824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 19860803 - 19860679
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||  | ||||||||| |||| ||| || |||||||| |||| |||| ||||||||    
T  19860803 aggtgacgaccttggggtgatttggtaccacatgcatatatgtgtcga-actaggcgcatttcatgttgacatgagtcttatttgtggcatatgaatgat 19860705  T
Q  269 gattgttgatgataagtgtgtttgat 294  Q
    ||||||||||||||||||||||||||    
T  19860704 gattgttgatgataagtgtgtttgat 19860679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 21615582 - 21615458
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  | ||||||||| |||| ||| || |||||||| |||| |||| | ||||||    
T  21615582 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcga-actaggcgcatttcatgttgacatgagtcttatttgtggcatattaatgat 21615484  T
Q  269 gattgttgatgataagtgtgtttgat 294  Q
    ||||||||||||||||||||||||||    
T  21615483 gattgttgatgataagtgtgtttgat 21615458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 24227065 - 24227191
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||  | |||| ||||||||| ||| || |||||||| |||| |||||||||||||    
T  24227065 aggtgacgaccttgaggtgattcggtacgacatgcatatatgtgtcga-actaggtgcatatcatgttgacatgagtcttatttgtggcatgtgaatgat 24227163  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    ||||||| ||||||||||||||||||||    
T  24227164 gattgttaatgataagtgtgtttgatga 24227191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 296
Target Start/End: Original strand, 5623049 - 5623152
Alignment:
Q  194 taccacatgcatatatgtgtcgggattaggcgcatatcatatt-ggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttg 292  Q
    |||||||||||| |||||||||| |||| ||||||| |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||  ||||    
T  5623049 taccacatgcatgtatgtgtcggaattaagcgcataacatatttggcatgagtcgtaattgttgcatgtgaatgatgattgttgatgataagtgcatttg 5623148  T
Q  293 atga 296  Q
    ||||    
T  5623149 atga 5623152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 28258276 - 28258051
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttgg--------------- 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| || | |||||||||  |                   
T  28258276 catcatagtcgtgttgagattttatatgatgttttattcattattgggcgccggccttgcagagatcttttgagatctagttacgatgttttattcgtta 28258177  T
Q  89 --ggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggt 186  Q
      || || ||| || ||||||||| || | ||||||| ||||||| |||||| |||||||||| | | | |||||| ||||| ||||||||||||||||     
T  28258176 ttgggctccggcctagcagagatcttttgagatctag-tttgtggacttcggtcttgcagagatccttggtggtctggatatgggtgacgaccttgagga 28258078  T
Q  187 gatatggtaccacatgcatatatgtgtc 214  Q
    ||| ||||||||||||||||||||||||    
T  28258077 gat-tggtaccacatgcatatatgtgtc 28258051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 29912634 - 29912548
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||||| ||||||||    
T  29912634 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattgacatgagtcgtaattgttgcatgtgaatgataattgttga 29912548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 5452303 - 5452427
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgtttt--attcattattgggcttcggcctagcagagatca-ttagtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||   | ||| ||||||||||||||| |||||||||| |||||||||||||||| || |||||| ||    
T  5452303 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggcttcggccttgcagagatcatttagtgatctagtttgtgggcttcggcct 5452402  T
Q  101 tgcagagatccttagtgatctagat 125  Q
    || ||||| | || ||| |||||||    
T  5452403 tgtagagacctttggtggtctagat 5452427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 23412502 - 23412397
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtt 290  Q
    |||||||||||||||||| || ||| |  |||||| |||||||||||||| || ||| ||||| ||||| |||||||||||||||||||||||||| |||    
T  23412502 tggtaccacatgcatataggtttcgagtataggcgaatatcatattggcatgaatctcaattgatgcatttgaatgatgattgttgatgataagtgagtt 23412403  T
Q  291 tgatga 296  Q
    ||||||    
T  23412402 tgatga 23412397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 24082691 - 24082605
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    |||||||| |||||| |||||||||| |||||||||||| ||||||| || ||||| | ||||||||||||||||||| ||||||||    
T  24082691 tggtaccaaatgcatgtatgtgtcggaattaggcgcatagcatattgacatgagtcgtgattgttgcatgtgaatgataattgttga 24082605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 26561404 - 26561502
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    ||||||| ||||||| |||||||||| ||||||||| || |||||| | || ||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  26561404 tggtaccgcatgcatgtatgtgtcggaattaggcgcgtagcatatttgacatgagtcgtaattgttgcatgtgaatgataattgttgatgataaatgtg 26561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 18779615 - 18779696
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||||||||||||||||||||||||||||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  18779615 atgatgttttattcattattgggcttcggcctagcagagatcttttgggatctagttttagggcttcggcctggcagagatc 18779696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 1170164 - 1170259
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagat 125  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | |||||||||| ||| |||||| || ||||||||| || | |||||||||    
T  1170164 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttggg-cttcggcctagcagagatcttttgagatctagat 1170259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 24470961 - 24470866
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagat 125  Q
    ||||||||||||||||||||||| |||||||||||||||||| || | |||||||||| ||| |||||| || ||||||||| || | |||||||||    
T  24470961 atgatgttttattcattattgggtttcggcctagcagagatcttttgagatctagttttggg-cttcggcctagcagagatcttttgagatctagat 24470866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 6455259 - 6455161
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    ||||||||||||||| |||||||||| ||||||| |||  |||| ||| || ||||  ||||| ||||||||||||| |||||||||||||||||||||    
T  6455259 tggtaccacatgcatgtatgtgtcggaattaggcacattgcatagttgacatgagttgtaattattgcatgtgaatgttgattgttgatgataagtgtg 6455161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 7424335 - 7424254
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||   ||||||||||  || |||||| || |||||||||    
T  7424335 atgatgttttattcattattgggctccggcctagcagagatcttttaggatctagttttagggcttcggcctggcagagatc 7424254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 1170310 - 1170361
Alignment:
Q  160 tctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgt 211  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  1170310 tctagatatgggtgacgaccttgaggagatttggtaccacatgcatatatgt 1170361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 25192600 - 25192700
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| |||| |||||||||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  25192600 catcatagtcgtgttgagat-----acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctagttt-tggacttcggtctagc 25192693  T
Q  104 agagatc 110  Q
     ||||||    
T  25192694 tgagatc 25192700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 17473392 - 17473433
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  17473392 atgatgttttattcattattgggctccggcctagcagagatc 17473433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 23492573 - 23492509
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||  |||||||  ||||||||    
T  23492573 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtcatgattagggacatatcat 23492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 11582421 - 11582371
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| |||| |||| ||||||||||||||||||||||||    
T  11582421 gatatgggtgacgaccctgagatgatttggtaccacatgcatatatgtgtc 11582371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 13793700 - 13793655
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  13793700 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 13793655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 21661316 - 21661361
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  21661316 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 21661361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 27185426 - 27185471
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  27185426 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 27185471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 7727148 - 7727084
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| || |||||  |||||||  ||||||||    
T  7727148 aggtgacgaccttgaggtgattcggtaccacatgcatttacgtgtcatgattagggacatatcat 7727084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 24470805 - 24470765
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatg 210  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  24470805 ggtgacgaccttgaggagatttggtaccacatgcatatatg 24470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 23510666 - 23510589
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagttt 86  Q
    ||||||||||||||||||||     | |||||||||||| | || |||||||||||| ||||||||| || | ||||||||||    
T  23510666 catcatagtcgtgttgagat-----acgatgttttattcgtaatagggcttcggcctggcagagatcttttgagatctagttt 23510589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 4863835 - 4863794
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatg 210  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||    
T  4863835 aggtgacgaccttgaggtgatttggtaccacattcatttatg 4863794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 32967770 - 32967811
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatg 210  Q
    |||||||||||||||||||||  |||||||||||||| ||||    
T  32967770 aggtgacgaccttgaggtgattcggtaccacatgcatttatg 32967811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 37189726 - 37189771
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||    
T  37189726 aggtgacgaccttgaggtgattcggtaccacttgcatttatgtgtc 37189771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 1170262 - 1170314
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctag 83  Q
    |||||||||||| |||| |||||||||||| ||||||||| || | |||||||    
T  1170262 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatctag 1170314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 11582530 - 11582478
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctag 83  Q
    |||||||||||||| || |||||||||||| ||||||||| || | |||||||    
T  11582530 gatgttttattcatcatagggcttcggcctggcagagatcttttgagatctag 11582478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 6e-77; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 18397605 - 18397397
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||| ||||||||||||  |  ||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  18397605 catcatagtcgtgttgagatttgatatgatgtttttgttgcatcattgggcttcggcctagcagagatcatttagtgatctagttttgtggacttcggtc 18397506  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  18397505 ttgcagagatccttagtgatctagatttgtggccttcggccttgcagaggcctttgatggtctagatataggtgacgaccttgaggtgatatggtaccac 18397406  T
Q  200 atgcatata 208  Q
    |||||||||    
T  18397405 atgcatata 18397397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 13016270 - 13016481
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||| |||||||||||||||||||||||||||||||  || || ||||||||||||||||||  | | ||||||||| | |||||||||||||||    
T  13016270 catcatagtagtgttgagattttatatgatgttttattcatattttggtttcggcctagcagagatctgttgagatctagtt-gtggacttcggtcttgc 13016368  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  13016369 agagatccttagtgatctagatttgtgggcttcggccttgcagagacctttgacggtctagatttaggtgacgaccttgagatgatatggtaccacatgc 13016468  T
Q  204 atatatgtgtcgg 216  Q
    |||| ||||||||    
T  13016469 atatttgtgtcgg 13016481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 22866847 - 22866631
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||  ||||||||||||  |  ||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  22866847 catcatagtcgtgttgagattg-atatgatgtttttgttacatcattgggcttcggcctagcagagatcatttagtgatctagttttgtggacttcggtc 22866749  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||| || ||| ||    
T  22866748 ttgcagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctttgacggtctagatataggtgacgaccttgaagtgaaatagtatca 22866650  T
Q  199 catgcatatatgtgtcggg 217  Q
    |||||||||||||||||||    
T  22866649 catgcatatatgtgtcggg 22866631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 19852840 - 19852714
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  19852840 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcatgagtcttatttgttgcatttgaatgatg 19852741  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||| ||||||||    
T  19852740 attgttgatgataagtgtatttgatga 19852714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 25368845 - 25369058
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||||| || ||||| |||||||||||| |||||||||||||| || ||| |  |     
T  25368845 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattggggttaggccttgcagagatcatttagtgatctagtttgtgggcttagaccc 25368944  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||| ||||||||||    
T  25368945 tgcagagatccattagtgatctagatt-gtgggcttcggccttgcagagaccttgg-tggtctagatataggtgacgaccttgaagtgaaatggtaccac 25369042  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||| ||||    
T  25369043 atgcatatatgcgtcg 25369058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 28196268 - 28196483
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| || ||| | | ||||||||||||||||| ||||||||||||| | |||||||||||    
T  28196268 catcatagtcgtgttgagattttatatgatgtttttgttgcatcatcgggttccagcctagcagagatcatttagtgatctagttttgtggacttcggtc 28196367  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| || ||| ||||||||| ||||||| | |  |||||||||||||||||||||||||| |||| |||||||||    
T  28196368 ttgcagagatccattagtgatctagatt-gtaggcgtcggccttgtagagacccttggcggtctagatataggtgacgaccttgaagtgaaatggtacca 28196466  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||| ||||||    
T  28196467 catgcatataagtgtcg 28196483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 23220263 - 23220142
Alignment:
Q  174 acgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattg 273  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||    
T  23220263 acgaccttgaggtgatttggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcatgggtcttaattgttgcatgtgaa-gataattg 23220165  T
Q  274 ttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||    
T  23220164 ttgatgataagtgtgtttgatga 23220142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 18422427 - 18422259
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttc-ggccttgca 145  Q
    ||||||| |||||| | |||||||||| || |||||||||| ||||||| ||||| ||||||||||||||||| ||||||| |||||||| |||||||||    
T  18422427 ttgggctccggccttgtagagatcatttgttatctagtttgcggacttcagtcttacagagatccttagtgatatagattt-tgggcttcaggccttgca 18422329  T
Q  146 gagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||| | | |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  18422328 gagacccttggtggtctggatatgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 18422259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 16134849 - 16134725
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  16134849 ggtgaagaccttgaggtgatttggtaccacatgcatat-tgtgtcgagaatagacgcatatcatattggcatgagtcttaattgttgcatgtgaatgatg 16134751  T
Q  270 attg-ttgatgataagtgtgtttgat 294  Q
    |||| |||||||||||||||||||||    
T  16134750 attgtttgatgataagtgtgtttgat 16134725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 25646312 - 25646456
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || | |||||| |||| ||||||||||||| |    
T  25646312 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcatagatcttttgagatctaatttgtggacttcggtcttac 25646411  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || | ||||||| ||||||| |||||| ||||||||||    
T  25646412 agagatcttttgagatctag-tttgtggacttcggtcttgcagaga 25646456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 32897402 - 32897258
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtctt 101  Q
    ||||||||| |||||||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  32897402 catcatagttgtgttgagatttgataagatgtttttgttgcatctttgggctccggcctagcagagatcattggtgatctagtttgtggacttcggtctt 32897303  T
Q  102 gcagagatccttagtgatctagatttgtgggcttcggccttgcaga 147  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  32897302 gcagagatccatagtgatctaga-ttgtgggcttcggccttgcaga 32897258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 15738927 - 15738713
Alignment:
Q  4 catcatagtcgtgttgagatttt-atatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtc 99  Q
    ||||||| |||||||| |||||| ||||||||||||  |  ||| ||||||||||||||| ||||| |||||| |||||||||||||| || |||  | |    
T  15738927 catcataatcgtgttgggatttttatatgatgtttttgttgcatcattgggcttcggccttgcagatatcatttagtgatctagtttgtgggctttagcc 15738828  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
     ||||||||||| ||||||||||||||| |||| |||||||||||||| |||| | | |||||||||||||||||||||| |||| ||||| ||||||||    
T  15738827 ctgcagagatccattagtgatctagatt-gtgg-cttcggccttgcagggacctttggtggtctagatataggtgacgacgttgaagtgatttggtacca 15738730  T
Q  199 catgcatatatgtgtcg 215  Q
    ||||||| |||||||||    
T  15738729 catgcatgtatgtgtcg 15738713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 21930464 - 21930343
Alignment:
Q  169 aggtgacgacctt-gaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatga 267  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| |  |||||  |||||||||||| | |||||||| |||||||||||||||||    
T  21930464 aggtgacgacctttgaggtgatttggtaccacatgcatatatgtgtcgtgtataggcatatatcatattggtatgagtcttagttgttgcatgtgaatga 21930365  T
Q  268 tgattgttgatgataagtgtgt 289  Q
    ||||||||||||||||||||||    
T  21930364 tgattgttgatgataagtgtgt 21930343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 34965516 - 34965387
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattg-ttgcatgtgaatg 266  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||| ||||||| |||||||||||| || ||||||||||    
T  34965516 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggaatagacgcatagcataattggcatgagtcttaattgtttacatgtgaatg 34965417  T
Q  267 atgattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||  | ||||||||||||    
T  34965416 atgattgttgatgaagactgtgtttgatga 34965387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 63 - 214
Target Start/End: Original strand, 25646411 - 25646561
Alignment:
Q  63 cagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtct 162  Q
    |||||||| || | ||||||||||| |||||||||||||||||||||| || | ||||||| ||||||| |||||| |||| ||||||| | | ||||||    
T  25646411 cagagatcttttgagatctagtttgtggacttcggtcttgcagagatcttttgagatctag-tttgtggacttcggtcttgtagagacccttggtggtct 25646509  T
Q  163 agatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
     ||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  25646510 ggatatgggtgacgaccttgaggagatttggtaccacatgcatatatgtgtc 25646561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 22846696 - 22846570
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||  | |||| ||||||||| ||| || |||||||| ||||  ||||||||||||    
T  22846696 aggtgacgaccttgcggtgatttggtactacatgcatatatgtgtcga-actaggtgcatatcatgttgacatgagtcttatttgtgacatgtgaatgat 22846598  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    |||||||| |||||||||||||||||||    
T  22846597 gattgttggtgataagtgtgtttgatga 22846570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 13622599 - 13622705
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| || | ||||||||||  || |||||| || ||    
T  13622599 catcatagtcatgttgagattttatatgatgttttattcatatttgggtttcggcctagcagagatcttttgagatctagttttagggcttcggcctggc 13622698  T
Q  104 agagatc 110  Q
    |||||||    
T  13622699 agagatc 13622705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 15006267 - 15006365
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatat-tggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||| || || ||||  |||||||||||||||||||||||||||||||||||| ||||    
T  15006267 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatatctgacatgagttgtaattgttgcatgtgaatgatgattgttgatgataaatgtg 15006365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 15736670 - 15736772
Alignment:
Q  8 atagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagag 107  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| || | ||||||||||  || ||||||||| ||||||    
T  15736670 atagttgtgttgagattttatatgatgttttattcatatttgggcttcggcctggcagagatcttttgagatctagttttagggcttcggtctggcagag 15736769  T
Q  108 atc 110  Q
    |||    
T  15736770 atc 15736772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 22467725 - 22467829
Alignment:
Q  193 gtaccacatgcatatatgtgtcgggattaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgttt 291  Q
    ||||||||||||| ||||| |||  |||||||||||| |||||| | || ||||  ||||||||||||||||||||||||| ||||||||||||||| ||    
T  22467725 gtaccacatgcatgtatgtttcgaaattaggcgcataacatatttgacatgagttgtaattgttgcatgtgaatgatgattattgatgataagtgtgctt 22467824  T
Q  292 gatga 296  Q
    |||||    
T  22467825 gatga 22467829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 12310675 - 12310729
Alignment:
Q  242 gagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  12310675 gagtcttatttgtggcatgtgaatgatgattgttgatgataagtgtgtttgatga 12310729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 18088214 - 18088295
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  18088214 atgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttttagggcttcggcctggcagagatc 18088295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 19609159 - 19609078
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  19609159 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttagggcttcggcctggcagagatc 19609078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 18843304 - 18843404
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| |||| |||||||||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  18843304 catcatagtcgtgttgagat-----acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctagttt-tggacttcggtctggc 18843397  T
Q  104 agagatc 110  Q
    |||||||    
T  18843398 agagatc 18843404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 29604144 - 29604062
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgt 274  Q
    |||||||||||||||  ||||||||| |||||||||||| ||||||| || ||||  |||||| |||||||||||||| |||||    
T  29604144 tggtaccacatgcatgcatgtgtcggaattaggcgcataacatattgacatgagttgtaattg-tgcatgtgaatgataattgt 29604062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 18004458 - 18004558
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| | || |||||||||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  18004458 catcatagtcgtgttgagat-----acgatgttttattcgtcatagggcttcggcctggcagagatcttttgagatctagttt-tggacttcggtctagc 18004551  T
Q  104 agagatc 110  Q
    |||||||    
T  18004552 agagatc 18004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 35017296 - 35017346
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  35017296 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtc 35017346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 18741111 - 18741070
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  18741111 atgatgttttattcattattgggctccggcctagcagagatc 18741070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 31627009 - 31626964
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  31627009 aggtgacgaccttgaggtgatttggtaccacatgcatgtatgtgtc 31626964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 18431311 - 18431256
Alignment:
Q  5 atcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcct 60  Q
    |||||||| ||||||||| |||||||||||||||||||||  ||||||| ||||||    
T  18431311 atcatagttgtgttgagagtttatatgatgttttattcatatttgggctccggcct 18431256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 18825265 - 18825343
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||||||||| |||| ||||||||||||  |||||||| || | ||||||||||  |||||||||||| |||||||||    
T  18825265 gatgttttattcgttatagggcttcggcctgacagagatcttttgagatctagttt-tggacttcggtctagcagagatc 18825343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 18383282 - 18383327
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  18383282 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 18383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 22428746 - 22428701
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  22428746 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 22428701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 32350656 - 32350575
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattgttgcatgtgaatgatgat 271  Q
    ||||||||||||||| |||||||||| |||||||||||  ||| |||  || ||||  |||||||||||| |||||||||||    
T  32350656 tggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaacatgagttgtaattgttgcatatgaatgatgat 32350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 25745897 - 25745941
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||| |||||||||||| || ||||||||    
T  25745897 ggtgacgaccttgaggtgatttggtaccacatgaatttatgtgtc 25745941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 33323383 - 33323319
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||||  |||||||  ||||||||    
T  33323383 aggtgacgaccttgaggtgattcggtaccaaatgcatttatgtgtcatgattagggacatatcat 33323319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 33539819 - 33539905
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||  ||| |||  || |||| | |||||||||||| ||||||| ||||||||    
T  33539819 tggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaacatgagt-tgaattgttgcatgcgaatgataattgttga 33539905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 16105129 - 16105084
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||| ||  |||||||||||||| ||||||||    
T  16105129 aggtgacgaccttgaggttatccggtaccacatgcatttatgtgtc 16105084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 17343786 - 17343827
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||| | |||||||||||| |||||||||    
T  17343786 atgatgttttattcattttagggcttcggcctggcagagatc 17343827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 18775782 - 18775737
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||| ||||||||||  |||||||||||||| ||||||||    
T  18775782 aggtgacgactttgaggtgatccggtaccacatgcatttatgtgtc 18775737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 22227143 - 22227184
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    |||| |||||||||||||| |||||||||||| |||||||||    
T  22227143 atgaagttttattcattatagggcttcggcctggcagagatc 22227184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 25646440 - 25646501
Alignment:
Q  52 cttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatcctt 113  Q
    |||||| || ||||||||| || | ||||||||||| |||||||||||||| ||||| ||||    
T  25646440 cttcggtcttgcagagatcttttgagatctagtttgtggacttcggtcttgtagagaccctt 25646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 35017184 - 35017225
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    |||||||||||||||| || |||||||||||| |||||||||    
T  35017184 atgatgttttattcatcatagggcttcggcctggcagagatc 35017225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 16889344 - 16889408
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||| ||||||||  |||||||||||||  ||||||||  |||||||  ||||||||    
T  16889344 aggtgacgacctggaggtgattcggtaccacatgcacttatgtgtcatgattagggacatatcat 16889408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 6e-77; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 15043613 - 15043319
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||||| |||||||||||||||||||||||||  |  ||| ||||||||||||||| |||| ||||||| |||||||||||||  || |||||| ||    
T  15043613 catcatagttgtgttgagattttatatgatgtttttgttgcatcattgggcttcggccttgcagggatcatttagtgatctagtttatgggcttcggcct 15043514  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||| ||||||| | | ||||||||||  |||||||||||||||||| || |||||||||    
T  15043513 tgcagagatccattagtgatctagatt-gtgggtttcggccttgtagagacctttggtggtctagatgaaggtgacgaccttgaggtcatttggtaccac 15043415  T
Q  200 atgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||| | | |||| ||||||||| ||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  15043414 atgcatatatgtgtc-gaactaggtgcatatcatgttgacatgagtcttctttgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 15043319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 4 - 296
Target Start/End: Original strand, 15110811 - 15111105
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||||| |||||||||||||||||||||||||  |  ||| ||||||||||||||| |||| ||||||| |||||||||||||  || |||||| ||    
T  15110811 catcatagtagtgttgagattttatatgatgtttttgttgcatcattgggcttcggccttgcagggatcatttagtgatctagtttatgggcttcggcct 15110910  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||| ||||||| | | ||||||||||  |||||||||||||||||| || |||||||||    
T  15110911 tgcagagatccattagtgatctagatt-gtgggtttcggccttgtagagacctttggtggtctagatgaaggtgacgaccttgaggtcatttggtaccac 15111009  T
Q  200 atgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||| | | |||| ||||||||| ||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  15111010 atgcatatatgtgtc-gaactaggtgcatatcatgttgacatgagtcttctttgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 15111105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 13811116 - 13811331
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||| ||||||||||||||||||||||||  |  ||| ||||||||||||||||||| |||||||| ||||||||||||| | |||||||||||    
T  13811116 catcatagtcatgttgagattttatatgatgtttttgttgcatcattgggcttcggcctagcatagatcatttagtgatctagttttgtggacttcggtc 13811215  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| |||||||||||  ||||||||||| | |  |||||||||||||||||||||||||| |||| |||||||||    
T  13811216 ttgcagagatccattagtgatctagatt-gtgggcttcggtattgcagagacctttggcggtctagatataggtgacgaccttgaagtgaaatggtacca 13811314  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  13811315 catgcatatatgtgtcg 13811331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 30235977 - 30236190
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||| ||||||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||| | ||||||||||| | |||||||||||    
T  30235977 catcatagtcatgttgagatttgatatgatgtttttgttgcatcattgggctccggcctagcagagatcattgactgatctagttttgtggacttcggtc 30236076  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||||||||||  |||||||||||||| |||||||||||||||| ||||||| | || ||||| ||||||||||||||||||||||||||||||||||||    
T  30236077 ttgcagagatctatagtgatctagatt-gtgggcttcggccttgtagagacctttgacggtctggatataggtgacgaccttgaggtgatatggtaccac 30236175  T
Q  200 atgcatatatgtgtc 214  Q
    || ||||||||||||    
T  30236176 atccatatatgtgtc 30236190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 18495893 - 18496108
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt---cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggt 98  Q
    |||||| |||||||||| |||| |||||||||||| |    ||| |||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||    
T  18495893 catcatcgtcgtgttgatatttcatatgatgttttttgttgcatcattgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggt 18495992  T
Q  99 cttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacc 197  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||| ||||||||    
T  18495993 cttgcagagatccattagtaatctagatt-gtgggcttcggccttgcagagacctttgacggtctagatataggtgacgaccttgaagtgaaatggtacc 18496091  T
Q  198 acatgcatatatgtgtc 214  Q
    |||||||||||||||||    
T  18496092 acatgcatatatgtgtc 18496108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 44054595 - 44054384
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtctt 101  Q
    ||||||||||||| |||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||    
T  44054595 catcatagtcgtgctgagatttgataagatgtttttgttgcatctttgggctccggcctagcagagatcattggtgatctagtttctggacttcggtctt 44054496  T
Q  102 gcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacat 201  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||| | || ||||||||||||||||||| ||||||||||||  ||||||||||    
T  44054495 gcagagatccatagtgatctaga-ttatgggcttcggccttgcagagacctttgacggtctagatataggtgacggccttgaggtgatccggtaccacat 44054397  T
Q  202 gcatatatgtgtc 214  Q
    |||| ||||||||    
T  44054396 gcatttatgtgtc 44054384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 45460442 - 45460655
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||  ||||||||||||  |  ||| |||||||| ||||||||||||||||||| ||||||||||||| | ||||||| |||    
T  45460442 catcatagtcgtgttgagattg-atatgatgtttttgttgcatcattgggctccggcctagcagagatcattgagtgatctagttttgtggacttcagtc 45460540  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||  |||| |||||||||||||||||||||||||||||||||| |    
T  45460541 ttgcagagatccatagtgatctagatt-gtgggcttcggccttgcagagacctttgacagtctggatataggtgacgaccttgaggtgatatggtaccgc 45460639  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||| ||||||    
T  45460640 atgcatatacgtgtcg 45460655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 50223761 - 50223887
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  50223761 ggtgatgaccttgaggtgatttggtatcacatgcatatatgtgtcgggattaggcgcatatcatattggcatgagtcttatttgttgcatgtgaatgatg 50223860  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||||||    
T  50223861 attgttgatgataagtgtgtttgatga 50223887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 44345500 - 44345290
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttgg--ggacttcggtctt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||    || |||| | |||    
T  44345500 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttttttgggcttcagcctt 44345401  T
Q  102 gcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacat 201  Q
    ||||||||| || | |||||||  |||||| |||||| |||||||||||| | | |||||| |||  ||||||||||||||||||||| || ||||||||    
T  44345400 gcagagatcttttgagatctag--ttgtggacttcggtcttgcagagacccttggtggtctggattcaggtgacgaccttgaggtgatttgttaccacat 44345303  T
Q  202 gcatatatgtgtc 214  Q
    |||||||||||||    
T  44345302 gcatatatgtgtc 44345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 33738855 - 33738687
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttc-ggccttgca 145  Q
    ||||||| |||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  33738855 ttgggctccggccttgcagagatcatttgtgatctagtttgtggacttcagtcttgcagagatccttagtgatctagattt-tgggcttcaggccttgca 33738757  T
Q  146 gagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||| | | |||||| |||||  ||||||||||| ||||||| |||||||||||||||||||||||||    
T  33738756 gagacccttggtggtctggatatgagtgacgaccttaaggtgatttggtaccacatgcatatatgtgtcg 33738687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 171 - 296
Target Start/End: Original strand, 10239037 - 10239162
Alignment:
Q  171 gtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatga 270  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| || || ||||||||||    
T  10239037 gtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggattaggcacatatcatattggcgtgagtcttaattgatgtatttgaatgatga 10239136  T
Q  271 ttgttgatgataagtgtgtttgatga 296  Q
    ||| ||||||||||||||||||||||    
T  10239137 ttgatgatgataagtgtgtttgatga 10239162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 215
Target Start/End: Original strand, 52266961 - 52267169
Alignment:
Q  10 agtcgtgttgagatttt-atatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtcttgcag 105  Q
    |||||||||| |||||| ||||||||||||  |  ||| |||||||| |||||| |||||||||||| |||||||||||||| || | | |  | |||||    
T  52266961 agtcgtgttgggatttttatatgatgtttttgttgcatcattgggctccggccttgcagagatcatttagtgatctagtttgtgggccttgaccctgcag 52267060  T
Q  106 agatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgca 204  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  52267061 agatccattagtgatctagatt-gtgggcttcggccttgcagagacctt-gatggtctagatataggtgacgaccttgaagtgatttggtaccacatgca 52267158  T
Q  205 tatatgtgtcg 215  Q
    | |||||||||    
T  52267159 tgtatgtgtcg 52267169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 43282873 - 43283087
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||  |  ||| ||||||||||||||| |||||||||||| |||||||||||||| ||   |    |     
T  43282873 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggcttcggccttgcagagatcatttagtgatctagtttgtgggaataaacca 43282972  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |  ||| |||| |||||||||||||||  || |||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| |||||||||    
T  43282973 taaagaaatccattagtgatctagatta-tgagcttcggccttgcagagacctttggtggtctagatataggtgacgaccttgaagtgatttggtaccac 43283071  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  43283072 atgcatatatgtgtcg 43283087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 17377039 - 17377165
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||| |  ||||||||||||||||||| | |||||||||||||||||||||||| |||    
T  17377039 ggtgatgaccttgaggtgatttggtaccacattcatatatgtgtcgtgtataggcgcatatcatattgggatgagtcttaattgttgcatgtgaatcatg 17377138  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    |||||||||||| ||||||||||||||    
T  17377139 attgttgatgatcagtgtgtttgatga 17377165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 47469936 - 47470062
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    ||||||||||||| ||| || ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||  |||||||||||||||| |    
T  47469936 ggtgacgaccttggggttatttggtaccacatgcatatatgtcttgggattaggcgcatatcatattggcatgagtcttatctgttgcatgtgaatgaag 47470035  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    | |||||||||| ||||||||||||||    
T  47470036 aatgttgatgatcagtgtgtttgatga 47470062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 41257951 - 41258073
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | |||| ||||||||| ||| || |||||||| ||||  |||||||||||||    
T  41257951 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgg-actaggtgcatatcatgttgacatgagtcttatttgtgacatgtgaatgatg 41258049  T
Q  270 attgttgatgataagtgtgtttga 293  Q
    ||||||||||||||||||||||||    
T  41258050 attgttgatgataagtgtgtttga 41258073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 33738938 - 33738794
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||  || || ||| |||||    
T  33738938 catcatagtcgtgttgagagtttatatgatgttttattcattatcgggctccggcctagccgagatcatttgtgatctagtttttgggctccggccttgc 33738839  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || ||||||||| ||||||| |||| | ||||||||||    
T  33738838 agagatcatttgtgatctag-tttgtggacttcagtcttgcagaga 33738794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 5372297 - 5372425
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattg-ttgcatgtgaatga 267  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||| ||||||| |||||||||||| || |||||||||||    
T  5372297 ggtgacgatcttgaggtgatttggtaccacatgcatatatgtgtcgggaatagctgcataacataattggcatgagtcttaattgtttacatgtgaatga 5372396  T
Q  268 tgattgttgatgataagtgtgtttgatga 296  Q
    ||||| |||||||||||||||||||||||    
T  5372397 tgatttttgatgataagtgtgtttgatga 5372425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 54365173 - 54365300
Alignment:
Q  170 ggtgacgacctt-gaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    |||||||||||| |||||||| |||||||||||||||||| || ||| |  ||||| || |||||||||||| |||||||| | ||||||||||||||||    
T  54365173 ggtgacgacctttgaggtgatttggtaccacatgcatatacgtatcgtgtataggcacacatcatattggcatgagtcttagtcgttgcatgtgaatgat 54365272  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||| |||||||||||    
T  54365273 gattgttgatgataagagtgtttgatga 54365300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 49070369 - 49070263
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    ||||||||||||||||||||||||| |  |||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  49070369 tggtaccacatgcatatatgtgtcgtggataggcgcatagcataattgacacgagtcttaattgttgcatgtgaatgatgattgttaatgataagtgtgt 49070270  T
Q  290 ttgatga 296  Q
    | |||||    
T  49070269 tcgatga 49070263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 12732727 - 12732621
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||| | || ||||| ||||||||||||||||||||||||| |||||||||||||||     
T  12732727 tggtatcacatgcatatatgtgtcggaattaggcgcataacatatttgacatgagtcgtaattgttgcatgtgaatgatgattattgatgataagtgtgc 12732628  T
Q  290 ttgatga 296  Q
    |||||||    
T  12732627 ttgatga 12732621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 19557887 - 19557797
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgat 281  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||||| || || |||||| ||||| |||||||||||||||||||||    
T  19557887 tggtaccacatgcatatatgtgtcgagtataggcgcatatcatattggcatgaatcctaattgatgcatttgaatgatgattgttgatgat 19557797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 16395671 - 16395747
Alignment:
Q  140 cttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgg 216  Q
    |||||||| ||| | || ||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  16395671 cttgcagaaacctttgacggtttagatataggtgacgaccttgaagtgaaatggtaccacatgcatatatgtgtcgg 16395747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 15288511 - 15288610
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttg 128  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||  || |||||| || ||||||||| || | ||||| ||||||    
T  15288511 atgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttttagggcttcggcctggcagagatcttttgagatctggatttg 15288610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 38763363 - 38763276
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    |||||||||||||||||||||||||| |||||||||||  ||| |||  || ||||  ||||||||||||||||||||| ||||||||    
T  38763363 tggtaccacatgcatatatgtgtcggaattaggcgcattgcataattaacatgagttgtaattgttgcatgtgaatgataattgttga 38763276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 9294198 - 9294098
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| |||| |||||||||||||||||||||| || | ||||||||||  |||||||||||  ||    
T  9294198 catcatagtcgtgttgagat-----acgatgttttattcgttatagggcttcggcctagcagagatcttttgagatctagttt-tggacttcggtcgagc 9294105  T
Q  104 agagatc 110  Q
    |||||||    
T  9294104 agagatc 9294098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 15295621 - 15295702
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||| ||||||||||| |||||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  15295621 atgatgttttatttattattgggctccggcctagcagagatcttttgggatctagttttagggcttcggcctggcagagatc 15295702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 13245107 - 13244988
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttg 128  Q
    |||||| |||||||||||||||||||||||||||| |||||| || | | |||||||| ||| |||||  || ||||||||| || | ||||||| ||      
T  13245107 atgatgatttattcattattgggcttcggcctagctgagatcttttgaggtctagttttggggcttcgtcctggcagagatcttttgagatctag-ttat 13245009  T
Q  129 tgggcttcggccttgcagaga 149  Q
     |||||||||||| |||||||    
T  13245008 agggcttcggcctggcagaga 13244988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 14900047 - 14900001
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  14900047 aggtgacgaccttgaggtgatttggtatcacatgcatatatgtgtcg 14900001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 16366354 - 16366404
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  16366354 gatatgggtgacgaccttgaggagatttggtaccacatgcatatatgtgtc 16366404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 18167467 - 18167367
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | ||| |||||||| |||| |||||||||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  18167467 catcatagtcgtgttgagat-----acgatattttattcgttatagggcttcggcctggcagagatcttttgagatctagttt-tggacttcggtctagc 18167374  T
Q  104 agagatc 110  Q
    |||||||    
T  18167373 agagatc 18167367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 53909424 - 53909474
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  53909424 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtc 53909474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 53706458 - 53706509
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||| |||||||||| ||||||||| | |||||||||||||||||||||||    
T  53706458 gatatgggtgacgaccctgaggtgatctagtaccacatgcatatatgtgtcg 53706509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 12837920 - 12837966
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  12837920 aggtgacgaccttgatgtgatttggtaccacatgcatgtatgtgtcg 12837966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 12245854 - 12245899
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  12245854 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 12245899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 12901365 - 12901410
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  12901365 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 12901410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 15852918 - 15852963
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  15852918 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 15852963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 21961161 - 21961206
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  21961161 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 21961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 42707189 - 42707152
Alignment:
Q  259 tgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||| |||||||||||||||||||||||    
T  42707189 tgtgaatgatgattattgatgataagtgtgtttgatga 42707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 13751779 - 13751850
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattc--attattgggcttcggcctagcagagatcatt 73  Q
    ||||||||||||||||| || ||||||||||||||  |   || |||||||| |||||||||||||||||||    
T  13751779 catcatagtcgtgttgatatgttatatgatgtttttgttggatcattgggctccggcctagcagagatcatt 13751850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 53909273 - 53909329
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtt 85  Q
    |||||||||||||||| || |||||||||||| ||||||||| || | |||||||||    
T  53909273 atgatgttttattcatcatagggcttcggcctggcagagatcttttgagatctagtt 53909329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 10642838 - 10642760
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||||||||| | || |||||||||||| ||||||||  || | ||||||||||  |||||||||||| |||||||||    
T  10642838 gatgttttattcttcatagggcttcggcctggcagagatattttgagatctagttt-tggacttcggtctagcagagatc 10642760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 7187539 - 7187616
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||| || |||| || |||||||| ||  ||||||| || ||||| |||||| | ||||||||||||    
T  7187539 tggtaccacatgcatgtaggtgttggaattaggcgtattgcatattgacatgagtcataattgctacatgtgaatgat 7187616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 8874086 - 8874131
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||| ||||    
T  8874086 aggtgacgaccttgaggtgatccggtaccacatgcatttatttgtc 8874131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 34197767 - 34197808
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatg 210  Q
    |||||||||||||||||||||  |||||||||||||| ||||    
T  34197767 aggtgacgaccttgaggtgattcggtaccacatgcatttatg 34197808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 27959599 - 27959563
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcat 205  Q
    |||||||||||||||||||||  ||||||||||||||    
T  27959599 aggtgacgaccttgaggtgattcggtaccacatgcat 27959563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 2e-74; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 22691436 - 22691652
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||| ||||||||||||  |  ||| |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||    
T  22691436 catcatagtcgtgttgagatttgatatgatgtttttgttgcatcattgggcttcggcctaacagagatcatttagtgatctagttttgtggacttcggtc 22691535  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| | || ||||| ||||||||||| ||||||||||||||||||||||||    
T  22691536 ttgcagagatccttagtgatctagatttgtgggcttcggccttacagagacctttgacggtctggatataggtgaagaccttgaggtgatatggtaccac 22691635  T
Q  200 atgcatatatgtgtcgg 216  Q
    |||||||||||||||||    
T  22691636 atgcatatatgtgtcgg 22691652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 22696083 - 22696299
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||| ||||||||||||  |  ||| |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||    
T  22696083 catcatagtcgtgttgagatttgatatgatgtttttgttgcatcattgggcttcggcctaacagagatcatttagtgatctagttttgtggacttcggtc 22696182  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| | || ||||| ||||||||||| ||||||||||||||||||||||||    
T  22696183 ttgcagagatccttagtgatctagatttgtgggcttcggccttacagagacctttgacggtctggatataggtgaagaccttgaggtgatatggtaccac 22696282  T
Q  200 atgcatatatgtgtcgg 216  Q
    |||||||||||||||||    
T  22696283 atgcatatatgtgtcgg 22696299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 4449715 - 4449930
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  4449715 catcatagtcgagttgagatttgataagatgtttttgttgcatctttgggctccggcctagcagagatcatttagtgatctagtttgtggacttcggtct 4449814  T
Q  101 tgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccaca 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||| ||||||||||||||||| |||| |||||||||||    
T  4449815 tgcagagatccttagtgatctagatttgtgggctccggccttgcagagacctttgacggtctagaaataggtgacgaccttgaagtgaaatggtaccaca 4449914  T
Q  201 tgcatatatgtgtcgg 216  Q
    ||||||||||||||||    
T  4449915 tgcatatatgtgtcgg 4449930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 22581420 - 22581633
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtctt 101  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||||||| || ||||||||| |||||||||||||||||||| |||||||||||||    
T  22581420 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggctccgacctagcagaaatcattagtgatctagtttgtggacttcggtctt 22581519  T
Q  102 gcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccaca 200  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| |||| |||||||||||    
T  22581520 gcagagatccattagagatctaga-ttgtgggcttcggccttgcagagacc-ttgacggtctagatataggtgacgaccttgaagtgaaatggtaccaca 22581617  T
Q  201 tgcatatatgtgtcgg 216  Q
    ||||| ||||||||||    
T  22581618 tgcatttatgtgtcgg 22581633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 36892195 - 36892403
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||| |||||| |||||    
T  36892195 catcatagttgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcaattgtgatctagttttggg-cttcggccttgc 36892293  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    ||||||| || ||||||||| ||||||| |||||| |||||||||||| | | |||||| |||  ||||||||||||||||||||| |||||||||||||    
T  36892294 agagatcatttgtgatctag-tttgtggacttcggtcttgcagagacccttggtggtctggattcaggtgacgaccttgaggtgatttggtaccacatgc 36892392  T
Q  204 atatatgtgtc 214  Q
    |||||||||||    
T  36892393 atatatgtgtc 36892403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 269861 - 269646
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  |||||||  |||||||||||||||||| |||||||||||||| ||||||||||||    
T  269861 catcatagtcgagttgagatttgataagatgtttttgttgcatctttgggctctggcctagcagagatcatttagtgatctagtttgtggacttcggtct 269762  T
Q  101 tgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccaca 200  Q
    |||||||||| || |||||||||||||||||||| |||||||||||||||| | || |||||||||||| ||||||||||||| |||| |||||||||||    
T  269761 tgcagagatctttggtgatctagatttgtgggctccggccttgcagagacctttgacggtctagatataagtgacgaccttgaagtgaaatggtaccaca 269662  T
Q  201 tgcatatatgtgtcgg 216  Q
    ||||||||||||||||    
T  269661 tgcatatatgtgtcgg 269646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 28972714 - 28972497
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||||||| ||||||||||||||||||| ||||||||| ||| | |||||||||||    
T  28972714 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggctccggcctagcagagatcattgagtgatctaattttgtggacttcggtc 28972615  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||||||||| | || ||||||||| || ||||||||||||| |||| |||||||||    
T  28972614 ttgcagagatccattagtgatctagatt-gtgggctccggccttgcagagacctttgacggtctagatgtatgtgacgaccttgaagtgaaatggtacca 28972516  T
Q  199 catgcatatatgtgtcggg 217  Q
    |||||||||||||||||||    
T  28972515 catgcatatatgtgtcggg 28972497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 31661 - 31876
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattc--attattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |   || |||||||| |||||||| |||||||||| ||||||||||||| | |||||||||||    
T  31661 catcatagtcgtgttgagattttatatgatgtttttgttgaatcattgggctccggcctagtagagatcatttagtgatctagttttgtggacttcggtc 31760  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||| ||||  | |  |||||||||||| ||||||||||||| |||| |||||||||    
T  31761 ttgcagagatccattagtgatctagatt-gtaggcttcggccttgcatagacatttggcggtctagatatatgtgacgaccttgaagtgaaatggtacca 31859  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  31860 catgcatatatgtgtcg 31876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 7320160 - 7319945
Alignment:
Q  5 atcatagtcgtgttgagatttt-atatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagt-ttggggacttcggtc 99  Q
    |||||||||||||||||||||| ||||||| ||||  |  ||| |||||||| ||||||| ||||||||||| |||||| |||| ||| |||||||||||    
T  7320160 atcatagtcgtgttgagatttttatatgatatttttgttgcatcattgggctccggcctaacagagatcatttagtgatatagtattgtggacttcggtc 7320061  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||||||||||| | |  |||||||||||||||||||||||||| |||| |||||||||    
T  7320060 ttgcagagatccattagtgatctagatt-gtgggcttcagccttgcagagacctttggcggtctagatataggtgacgaccttgaagtgaaatggtacca 7319962  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  7319961 catgcatatatgtgtcg 7319945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 24572878 - 24573094
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttt-tatt-cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||| ||||||||||||||||||||||| | || ||| |||||||| |||||||  |||||||||| ||||||||||||| | |||||||||||    
T  24572878 catcatagtcatgttgagattttatatgatgtttatgttgcatcattgggctccggcctaaaagagatcatttagtgatctagttttgtggacttcggtc 24572977  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggt-gacgaccttgaggtgatatggtacc 197  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |||| | || ||||||||||||||| ||||||||||| |||| ||||||||    
T  24572978 ttgcagagatccattagtgatctagatt-gtgggcttcggccttgcagtgacctttgaaggtctagatataggttgacgaccttgaagtgaaatggtacc 24573076  T
Q  198 acatgcatatatgtgtcg 215  Q
    ||||||||||||| ||||    
T  24573077 acatgcatatatgggtcg 24573094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 25877453 - 25877661
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||||||  || | |||||||||| ||| || |||||||||    
T  25877453 catcatagtcgtgtggagattttatatgatgttttattcattattgggccccgacctagcagagatattttgagatctagttttggg-ctccggtcttgc 25877551  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    ||||||| || | ||||||| ||||||| |||||| |||||||||||| | | |||||| |||  ||||||||||||||||| ||| |||||||||||||    
T  25877552 agagatcttttgagatctag-tttgtggacttcggtcttgcagagacccttggtggtctggattaaggtgacgaccttgaggagatttggtaccacatgc 25877650  T
Q  204 atatatgtgtc 214  Q
    |||||||||||    
T  25877651 atatatgtgtc 25877661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 48 - 282
Target Start/End: Complemental strand, 721057 - 720827
Alignment:
Q  48 tgggcttcggcctagcagagatca-ttagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcag 146  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||  ||||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  721057 tgggcttcggccttgcagagatcaattagtgatctagtttgtgggtttcggccttgcagagatcattagtgatctagatt-gtgggcttcggccttgcag 720959  T
Q  147 agaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtc 246  Q
    ||||| | | ||||||||||||||||||||  ||||| | ||| |||||||||||||||||||||||||  | |||| ||||||||| |   ||||||||    
T  720958 agacctttggtggtctagatataggtgacgttcttgaagagatttggtaccacatgcatatatgtgtcga-actaggtgcatatcatgt---cacgagtc 720863  T
Q  247 ttaattgttgcatgtgaatgatgattgttgatgata 282  Q
    ||| | ||   |||||| ||||||||||| ||||||    
T  720862 ttattggtgaaatgtgattgatgattgttcatgata 720827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 19658516 - 19658389
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattg-ttgcatgtgaatga 267  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||  ||| || |||||||||||| || |||||||||||    
T  19658516 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaggcgcatatcacgttgacatgagtcttaattgtttacatgtgaatga 19658418  T
Q  268 tgattgttgatgataagtgtgtttgatga 296  Q
    ||||||| |||||||||||||||||||||    
T  19658417 tgattgtcgatgataagtgtgtttgatga 19658389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 24272624 - 24272499
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||| |||||||||| ||||||||    
T  24272624 ggtgacgaccttgaagtgatttggtaccacatgcatatatgtgtcgggattaa-cacatatcatattggcatgagtcttatttgttgcatgcgaatgatg 24272526  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
     || |||||||||||||| ||||||||    
T  24272525 gtttttgatgataagtgtatttgatga 24272499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 18534395 - 18534266
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattg-ttgcatgtgaatga 267  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| || |||||||||||| || ||||||||||     
T  18534395 ggtgacgacgttgaggtgatttggtaccacatgcatatatgtgtcgggaataggcgcatatcataattgtcatgagtcttaattgtttacatgtgaatgg 18534296  T
Q  268 tgattg-ttgatgataagtgtgtttgatga 296  Q
    |||||| |||||||||||||||||||||||    
T  18534295 tgattgtttgatgataagtgtgtttgatga 18534266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 721144 - 720996
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgtttt--attcattattgggcttcggcctagcagagatc-attagtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||| ||||||||||||||   | ||| |||||| |||||||| ||||||||| ||||||||||||||||| || |||||| ||    
T  721144 catcatagtcgtgttgagatattatatgatgtttttgttgcatcattgggtttcggccttgcagagatcaattagtgatctagtttgtgggcttcggcct 721045  T
Q  101 tgcagagatc-cttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  721044 tgcagagatcaattagtgatctag-tttgtgggtttcggccttgcagaga 720996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 43641393 - 43641270
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||  | |||| |||||| || ||| |  |||||||| |||| |||||||||||||    
T  43641393 aggtgacgaccttgaggtgattcggtaccacatgcatatatgtgtcga-actaggtgcatataatgttgacctgagtcttatttgtggcatgtgaatgat 43641295  T
Q  269 gattgttgatgataagtgtgtttga 293  Q
    ||||||| |||||||||||||||||    
T  43641294 gattgttaatgataagtgtgtttga 43641270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 20271935 - 20271828
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaatt-gttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    |||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||| | | |||||||  |||||||||||||||||||||||    
T  20271935 tggtaccacatgcatatatgtgtcgggaataggcgcatagcataattggcatgagtcttaattggctacatgtgagcgatgattgttgatgataagtgtg 20271836  T
Q  289 tttgatga 296  Q
    ||||||||    
T  20271835 tttgatga 20271828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 19435066 - 19435189
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  | |||| |||||||||   | || |||||||| |||| ||||||| ||||     
T  19435066 aggtgacgaccttgaggtgatttgataccacatgcatatatgtgtcga-actaggtgcatatcat---gacatgagtcttatttgtggcatgtggatgag 19435161  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||||||||||||||||    
T  19435162 gattgttgatgataagtgtgtttgatga 19435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 24966970 - 24966865
Alignment:
Q  5 atcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgca 104  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||| | || | ||||||||||  || |||||| || |||    
T  24966970 atcatagtcgtgttgagattttatatgatgttttattcatatttgggcttcggcctggcagagagcttttgagatctagttttagggcttcggcctggca 24966871  T
Q  105 gagatc 110  Q
    ||||||    
T  24966870 gagatc 24966865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 22787524 - 22787669
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatca-ttagtgatctagtttggggacttcggtct 100  Q
    ||||||||||||||||||| || ||||||||||||  |  ||| |||||| |||||||| |||||||||| |||||||||||||||| || ||| |  |     
T  22787524 catcatagtcgtgttgagaatt-atatgatgtttttgttgcatcattgggtttcggccttgcagagatcatttagtgatctagtttgtgggctttgagcc 22787622  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcaga 147  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  22787623 tgcagagatccattagtgatctaga-ttgtgggctccggccttgcaga 22787669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 25132763 - 25132665
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||| | ||  |||| ||||||||||||||||||||||| ||||| |||||||||||    
T  25132763 tggtaccacatgcatgtatgtgtcgaaattaggcgcatagcatatttgacatcagtcgtaattgttgcatgtgaatgatgagtgttggtgataagtgtg 25132665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 22137424 - 22137542
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || |||||| |||||||| ||| || |||||||  |||  |||| |||||||||    
T  22137424 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaggctcatatcat-ttgacatgagtcttttttg-agcatatgaatgatg 22137520  T
Q  270 attgttgatgataagtgtgttt 291  Q
    | ||||| || |||||||||||    
T  22137521 aatgttggtgctaagtgtgttt 22137542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 25600527 - 25600482
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25600527 aggtgacgaccttgaggtaatatggtaccacatgcatatatgtgtc 25600482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 24088972 - 24089015
Alignment:
Q  172 tgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  24088972 tgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 24089015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 9654331 - 9654371
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagat 69  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  9654331 atgatgttttattcattattgggctccggcctagcagagat 9654371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 4884 - 4929
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  4884 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 4929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 20628896 - 20628977
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||| |||||||||||| |||||||||||| ||||||||| || | |||||||||   || |||||| || |||||||||    
T  20628896 atgatgatttattcattatagggcttcggcctggcagagatcttttgagatctagttatagggcttcggcctggcagagatc 20628977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 22862054 - 22862009
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||    
T  22862054 aggtgacgaccttgaggtgatctcgtaccacatgcatttatgtgtc 22862009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 23823116 - 23823161
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  23823116 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 23823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 23825060 - 23825105
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  23825060 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 23825105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 23832195 - 23832240
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  23832195 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 23832240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 24296180 - 24296225
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  24296180 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 24296225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 25304135 - 25304090
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  25304135 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 25304090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 461394 - 461314
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||| |||||||||||| |||||||||||| ||||||||| || | |||||||||   || |||||| || |||||||||    
T  461394 atgatgatttattcattat-gggcttcggcctggcagagatcttttgagatctagttatagggcttcggcctggcagagatc 461314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 19660912 - 19660821
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataa 283  Q
    ||||||||||||||| || |||||  | ||||| ||||||||| ||| || |||||||| |||| | ||||||||| ||||||| | ||||||    
T  19660912 tggtaccacatgcatgtaggtgtc-agtttaggtgcatatcatgttgacatgagtcttacttgtagtatgtgaatggtgattgtgggtgataa 19660821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 9e-73; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 142303 - 142094
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  142303 catcatagccgtgttgagagtttatatgatgttttattcattattgggctccggccttgcagagatcatttgtgatctagtttgtggacttcggtcttgc 142204  T
Q  104 agagatccttagtgatctagatttgtgggc-ttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatg 202  Q
    |||||||||||||||||||||||| ||||| || | ||||||||||||| | | |||||| ||||| |||||||||||||||||||| ||||||||||||    
T  142203 agagatccttagtgatctagattt-tgggctttagaccttgcagagacccttggtggtctggatatgggtgacgaccttgaggtgatttggtaccacatg 142105  T
Q  203 catatatgtgt 213  Q
    |||||||||||    
T  142104 catatatgtgt 142094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 10862345 - 10862559
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgt-tttatt-cattattgggcttcggcctagcagagatca-ttagtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||||||||| |||||||||| |||||||||||||||| || |||||| ||    
T  10862345 catcatagtcgtgttgagattttatatgatgtgtttgttgcatcattgggcttcggccttgcagagatcacttagtgatctagtttgtgggcttcggcct 10862444  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    | ||||||||| ||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| || |||  |    
T  10862445 tacagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctttggtggtctagatataggtgacgaccttgaagtgatttgctactgc 10862543  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  10862544 atgcatatatgtgtcg 10862559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 8565177 - 8565303
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  8565177 ggtgacgaccttgaggtgatttggtaccacatgcatatatttgtcgggattaggcgcatatcatattggcataagtcttaattgttgcatgtgaatgatg 8565276  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||||||    
T  8565277 attgttgatgataagtgtgtttgatga 8565303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 15629446 - 15629231
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    ||||||||||| |||||||||||||||||||||||  |  ||| ||||||||||||| |||||||||||||| ||||||||||||| | |||||||||||    
T  15629446 catcatagtcgcgttgagattttatatgatgtttttgttgcatcattgggcttcggcgtagcagagatcatttagtgatctagttttgtggacttcggtc 15629347  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||| ||||||| | |  |||||||||||||||||||||| |||  ||| |||||||||    
T  15629346 ttgcagagttccattagtgatctagatt-gtgggcttcggccttgtagagacctttggcggtctagatataggtgacgaccatgaattgaaatggtacca 15629248  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  15629247 catgcatatatgtgtcg 15629231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 15823984 - 15824148
Alignment:
Q  50 ggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15823984 ggcttcggccttgcagagatcatttgtgatctagtttgtggacttcggtcttgcagagatccttagtgatctaga-ttgtgggcttcggccttgcagaga 15824082  T
Q  150 ccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    || | |  ||||  ||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  15824083 cccttggcggtcaggatatggatgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 15824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 44863835 - 44863667
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttc-ggccttgca 145  Q
    ||||||| |||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  44863835 ttgggctccggccttgcagagataatttgtgatctagtttgtggacttcggtcttgcagagatccttagtgatctagattt-tgggcttcaggccttgca 44863737  T
Q  146 gagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||| | | |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  44863736 gagacccttggtggtctggatatgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 44863667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 12249601 - 12249815
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||| ||||||||||||||||||||||||  |  ||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  12249601 catcatagtcatgttgagattttatatgatgtttttgttgcatcattgggctccggcctagcagggatcatttagtgatctagtttgtggacttcggtct 12249700  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| |||||||||||  || ||||| || |   |||||||||||| ||||||||| |||| |||||||||||||||    
T  12249701 tgcagagatccattagtgatctagatt-gtgggcttcggtttttcagagtccttttttggtctagatattggtgacgactttgaagtgatatggtaccac 12249799  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  12249800 atgcatatatgtgtcg 12249815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 16571581 - 16571795
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||| | |||||||||||| ||||||||||||  |  ||| |||||||| ||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  16571581 catcatatttgtgttgagatttgatatgatgtttttgttgcatcattgggctccggcctaacagagatcatttagtgatttagtttgtggacttcggtct 16571680  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    || |||||||| ||||||||||||||| |||||||||||||||||| ||||| | || ||||||||||||||||| |||||||| |||| ||||||||||    
T  16571681 tgtagagatccattagtgatctagatt-gtgggcttcggccttgcaaagacctttgacggtctagatataggtgatgaccttgaagtgaaatggtaccac 16571779  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  16571780 atgcatatatgtgtcg 16571795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 16594081 - 16593867
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||| | |||||||||||| ||||||||||||  |  ||| |||||||| ||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  16594081 catcatatttgtgttgagatttgatatgatgtttttgttgcatcattgggctccggcctaacagagatcatttagtgatttagtttgtggacttcggtct 16593982  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    || |||||||| ||||||||||||||| |||||||||||||||||| ||||| | || ||||||||||||||||| |||||||| |||| ||||||||||    
T  16593981 tgtagagatccattagtgatctagatt-gtgggcttcggccttgcaaagacctttgacggtctagatataggtgatgaccttgaagtgaaatggtaccac 16593883  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  16593882 atgcatatatgtgtcg 16593867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 49049290 - 49049496
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttgg-ggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||||| |||||||||||||||        ||||||||||| | ||||||||||||    
T  49049290 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggtttcggcctagcagag--------tgatctagttttgtggacttcggtct 49049381  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| | |  |||||||||||||||||||||||||| |||| ||||||||||    
T  49049382 tgcagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctttggcggtctagatataggtgacgaccttgaagtgaaatggtaccac 49049480  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  49049481 atgcatatatgtgtcg 49049496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 13273418 - 13273203
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    ||||||||||||||||| || |||||| |||||||  |  ||| ||||||||| ||| |||||||||||||| ||||||||||||| | ||||||| |||    
T  13273418 catcatagtcgtgttgaaatattatataatgtttttgttgcatcattgggctttggcatagcagagatcatttagtgatctagttttgtggacttcagtc 13273319  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||||||||| | | | |||||||||||| |||||||||||| |||| |||||||||    
T  13273318 ttgcagagatccattagtgatctagatt-gtgggcctcggccttgcagagacctttggtagtctagatatagatgacgaccttgaagtgaaatggtacca 13273220  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  13273219 catgcatatatgtgtcg 13273203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 47288368 - 47288200
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttc-ggccttgca 145  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  47288368 ttgggcttcggccttgcagagatcatttgtgatctagtttgtggacttcggtcttgcaaagatccttagtgatctagattt-tgggcttcaggccttgca 47288270  T
Q  146 gagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||| | | |||||| ||||| |||||| |||||| | |||| |||||||||||||||||||||||||    
T  47288269 gagacccttggtggtctggatatgggtgacaaccttgggatgatttggtaccacatgcatatatgtgtcg 47288200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 15823898 - 15824042
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||   | |||||| |||||    
T  15823898 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcatttgtgatctagttttttggcttcggccttgc 15823997  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || ||||||||| ||||||| |||||| ||||||||||    
T  15823998 agagatcatttgtgatctag-tttgtggacttcggtcttgcagaga 15824042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 9322663 - 9322789
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||  ||||||| |||||||||||||||||||    
T  9322663 ggtgacgaccttgatgtgatttggtaccacatgcatatatgtgtccggattaagtgcatatcatattggcataagtcttatttgttgcatgtgaatgatg 9322762  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    | |||||||||||||||||||||||||    
T  9322763 actgttgatgataagtgtgtttgatga 9322789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 11285887 - 11285672
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattag-tgatctagtttgg-ggacttcggtc 99  Q
    |||||||||| |||||| |||||||||||||||||  |  ||| |||||||| ||||||||||||||||||| | ||||||||||| | |||||||||||    
T  11285887 catcatagtcatgttgaaattttatatgatgtttttgttgcatcattgggctccggcctagcagagatcatttggtgatctagttttgtggacttcggtc 11285788  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccg-tcgatggtctagatataggtgacgaccttgaggtgatatggtacc 197  Q
    |||||||||||| |||||||||||| |||||||||||  ||||||||||||||  | | |||||| |  |||||||||||||||||| | || |||||||    
T  11285787 ttgcagagatccattagtgatctag-tttgtgggctttagccttgcagagaccccttggtggtctggggataggtgacgaccttgagttaatttggtacc 11285689  T
Q  198 acatgcatatatgtgtc 214  Q
    |||||||||||||||||    
T  11285688 acatgcatatatgtgtc 11285672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 4483314 - 4483185
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattg-ttgcatgtgaatg 266  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| ||| ||||||| |||||||||||| || ||||||||||    
T  4483314 aggtgacgaccttgacgtgatttggtaccacatgcatatatgtgtcgggaataggcgcatagcataattggcatgagtcttaattgtttacatgtgaatg 4483215  T
Q  267 atgattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||| |||||||    
T  4483214 atgattgttgatgataagtgtgcttgatga 4483185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 18305290 - 18305434
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||| |||||| ||||||||| || | ||||||||||| |||||||||||||||    
T  18305290 catcatagtcgtgttgagctttattatgatgttttattcattattgggctccggccttgcagagatcttttgagatctagtttgtggacttcggtcttgc 18305389  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || ||||| ||| ||| |||||||||||||||||||||    
T  18305390 agagatcatttgtgatttag-tttttgggcttcggccttgcagaga 18305434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 47288451 - 47288311
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||  || |||||| |||||    
T  47288451 catcatagtcgtgttgagagtttatatgatgttttattcattattgggctccggcctagcagagataatttgtgatctagtttttgggcttcggccttgc 47288352  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgca 145  Q
    ||||||| || ||||||||| ||||||| |||||| ||||||    
T  47288351 agagatcatttgtgatctag-tttgtggacttcggtcttgca 47288311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 28719022 - 28718895
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| |||| ||||||  | ||||||||||||||||||| ||||||||    
T  28719022 ggtgacgaccttgaggtgacttggtaccacatgcatatatgtgtcgtgattaggcgaatataatattgatatgagtcttaattgttgcatgggaatgatg 28718923  T
Q  270 attg-ttgatgataagtgtgtttgatga 296  Q
    |||| || ||||||||||||||||||||    
T  28718922 attgtttcatgataagtgtgtttgatga 28718895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 9058230 - 9058354
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  | |||| ||||||||| ||| || |||||||| |||| |||| ||||||||    
T  9058230 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcga-actaggtgcatatcatgttgacatgagtcttatttgtggcatatgaatgat 9058328  T
Q  269 gattgttgatgataagtgtgtttgat 294  Q
    ||||||||||||||||||||||||||    
T  9058329 gattgttgatgataagtgtgtttgat 9058354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 13867562 - 13867679
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || | ||||||||||| ||||||||||||||     
T  13867562 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggccttgcagagatcttttgagatctagtttgtggacttcggtcttgt 13867661  T
Q  104 agagatccttagtgatct 121  Q
    | ||| |||| |||||||    
T  13867662 aaagacccttggtgatct 13867679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 20587210 - 20587316
Alignment:
Q  171 gtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatga 270  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||| ||||||||| ||||||||||| |    
T  20587210 gtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcggaattaggcgcatagcatattagcatgagtcgtaattgttggatgtgaatgataa 20587309  T
Q  271 ttgttga 277  Q
    |||||||    
T  20587310 ttgttga 20587316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 44863919 - 44863774
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatcta-gtttggggacttcggtcttg 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||||||| ||||  || || ||| ||||    
T  44863919 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggtctagcatagatcatttgtgatctaggtttttgggctccggccttg 44863820  T
Q  103 cagagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    |||||||  || ||||||||| ||||||| |||||| ||||||||||    
T  44863819 cagagataatttgtgatctag-tttgtggacttcggtcttgcagaga 44863774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 21676631 - 21676759
Alignment:
Q  169 aggtgacgacctt-gaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatga 267  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||||||| |  |||||||||||||||||| || |||||||  |||||||| ||||| ||    
T  21676631 aggtgacgacctttgaggcgatttggtaccacatgcatatatgtgtcgtgtataggcgcatatcatattgccatgagtctttgttgttgcacgtgaagga 21676730  T
Q  268 tgattgttgatgataagtgtgtttgatga 296  Q
    ||||||||| |||||||||||||||||||    
T  21676731 tgattgttgttgataagtgtgtttgatga 21676759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 12545200 - 12545343
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||  |||||||| || | ||||||||||  || |||||| |||||    
T  12545200 catcatagtcgtgttgagattttatgcgatgttttattcattattgggctccggccttacagagatcttttgagatctagtttttgggcttcggccttgc 12545299  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || ||||||||| ||| |||| ||||||||||||||||    
T  12545300 agagatcatt-gtgatctag-tttttgggtttcggccttgcagaga 12545343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 12545283 - 12545448
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcag 146  Q
    |||||||||||||| |||||||||||| ||||||||||||  ||  ||||| |||||||||||| ||   ||||||| ||||||| |||| | |||||||    
T  12545283 ttgggcttcggccttgcagagatcatt-gtgatctagtttttgggtttcggccttgcagagatctttta-gatctag-tttgtggacttctgtcttgcag 12545379  T
Q  147 agaccgtcgatggtctagatataggtgacgaccttgaggtga-tatggtaccacatgcatatatgtgtc 214  Q
    ||||| | | |||||| |||  |||||||||||||||||||| | ||||||||||||||||||||||||    
T  12545380 agacccttggtggtctggattcaggtgacgaccttgaggtgattttggtaccacatgcatatatgtgtc 12545448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 16382145 - 16382059
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||| ||||    
T  16382145 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattggcatgagtcgtaattgttgcatgtgaatgataattattga 16382059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 15979707 - 15979808
Alignment:
Q  192 ggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtt 290  Q
    |||| |||||||||||||||||||||| || ||||||| |||| ||| || |||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  15979707 ggtatcacatgcatatatgtgtcgggaatatgcgcatagcataattgacatgagtcttagttgttgcatgtgaatggtgattgttgatgataaatgtgtt 15979806  T
Q  291 tg 292  Q
    ||    
T  15979807 tg 15979808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 14939362 - 14939276
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||| |||||||||||||||| |||| ||||||||    
T  14939362 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattgacatgagtcgtaattgttgcatgtgattgataattgttga 14939276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 15366955 - 15366869
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||| |||||||||||||||| |||| ||||||||    
T  15366955 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattgacatgagtcgtaattgttgcatgtgattgataattgttga 15366869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 33558276 - 33558170
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    ||||||||||||||| |||||||||| |||||||||||  |||| ||   | ||||  |||||||||||||||||||||||||||||||||||||||||     
T  33558276 tggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaatatgagttgtaattgttgcatgtgaatgatgattgttgatgataagtgtgc 33558177  T
Q  290 ttgatga 296  Q
    |||||||    
T  33558176 ttgatga 33558170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 2192201 - 2192281
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||  |||||||||||| |||||||||    
T  2192201 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt-tggacttcggtctagcagagatc 2192281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 4437432 - 4437322
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtga----atgatgattgttgatgataagt 285  Q
    ||||||||||||||| |||||||||| |||||||||||  |||| ||  || ||||  ||||||||||||||||    ||||||||||||||||||||||    
T  4437432 tggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaacatgagttgtaattgttgcatgtgaatgaatgatgattgttgatgataagt 4437333  T
Q  286 gtgtttgatga 296  Q
    |||||||||||    
T  4437332 gtgtttgatga 4437322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 4444833 - 4444723
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtga----atgatgattgttgatgataagt 285  Q
    ||||||||||||||| |||||||||| |||||||||||  |||| ||  || ||||  ||||||||||||||||    ||||||||||||||||||||||    
T  4444833 tggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaacatgagttgtaattgttgcatgtgaatgaatgatgattgttgatgataagt 4444734  T
Q  286 gtgtttgatga 296  Q
    |||||||||||    
T  4444733 gtgtttgatga 4444723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 13038610 - 13038729
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttg 128  Q
    |||||| || |||||||||||||||||||||||||| ||||| || | ||||||||||  || ||||||||||||||||||| || | ||||||| ||      
T  13038610 atgatgattaattcattattgggcttcggcctagcatagatcttttgagatctagttttagggcttcggtcttgcagagatcttttgagatctag-ttat 13038708  T
Q  129 tgggcttcggccttgcagaga 149  Q
     |||||||||||| |||||||    
T  13038709 agggcttcggcctagcagaga 13038729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 13867617 - 13867732
Alignment:
Q  99 cttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| || | ||||||| ||||||| |||||| |||| | ||||| | | || ||| ||||| |||||||||||||||| ||| ||||||||    
T  13867617 cttgcagagatcttttgagatctag-tttgtggacttcggtcttgtaaagacccttggtgatctggatatgggtgacgaccttgaggagatttggtacca 13867715  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  13867716 catgcatatatgtgtcg 13867732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 16480440 - 16480521
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  16480440 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttagggcttcggcctggcagagatc 16480521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 18981411 - 18981492
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  18981411 atgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttttagggcttcggcctggcagagatc 18981492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 7291530 - 7291430
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| |||| |||||||||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  7291530 catcatagtcgtgttgagat-----acgatgttttattcgttatagggcttcggcctggcagagatcttttgagatctagttt-tggacttcggtctagc 7291437  T
Q  104 agagatc 110  Q
    |||||||    
T  7291436 agagatc 7291430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 15926026 - 15925945
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| || ||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  15926026 atgatgttttattcattattgggctccgtcctagcagagatcttttgggatctagttttagggcttcggcctggcagagatc 15925945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 11582346 - 11582387
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  11582346 atgatgatttattcattattgggcttcggcctagcagagatc 11582387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 12753450 - 12753405
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  12753450 aggtgacgaccttgaggtgatttggtaccacatgcatttatgtgtc 12753405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 36051323 - 36051267
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtt 85  Q
    ||||||||||||||||||||||||| ||||||||||| |||| || | |||||||||    
T  36051323 atgatgttttattcattattgggctccggcctagcagcgatcttttgagatctagtt 36051267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 26071861 - 26071907
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||    
T  26071861 aggtgacgaccttgaggtgatccgataccacatgcatatatgtgtcg 26071907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 26095648 - 26095694
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||    
T  26095648 aggtgacgaccttgaggtgatccgataccacatgcatatatgtgtcg 26095694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 3893664 - 3893619
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  3893664 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 3893619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 13388534 - 13388489
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  13388534 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 13388489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 16210439 - 16210398
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  16210439 atgatgatttattcattattgggcttcggcctggcagagatc 16210398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 13376241 - 13376196
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||||    
T  13376241 aggtgacgaccttgaggtgattcggtaccatatgcatttatgtgtc 13376196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 15914030 - 15914071
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatg 210  Q
    |||||||||||||||||||||  |||||||||||||| ||||    
T  15914030 aggtgacgaccttgaggtgattcggtaccacatgcatttatg 15914071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Complemental strand, 16382043 - 16382010
Alignment:
Q  259 tgtgaatgatgattgttgatgataagtgtgtttg 292  Q
    |||||||||| |||||||||||||||||||||||    
T  16382043 tgtgaatgataattgttgatgataagtgtgtttg 16382010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 45453850 - 45453895
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||| ||||||||||||||  |||||||||||||| ||||||||    
T  45453850 aggtgatgaccttgaggtgatccggtaccacatgcatttatgtgtc 45453895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 112899 - 112939
Alignment:
Q  173 gacgaccttgaggtgatatggtaccacatgcatatatgtgt 213  Q
    |||||||||||||||||  |||||||||||||| |||||||    
T  112899 gacgaccttgaggtgattcggtaccacatgcatttatgtgt 112939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 9e-73; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 49966321 - 49966107
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  49966321 catcatagtagtgttgagattttatatgatgttttattcattattgggctccggcctggcagagatcattagtgatctagtttgtggacttcggtcttgc 49966222  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga----ccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||||||| ||||||||||||||  |||||||| ||||||||||||    || | | |||||| ||||| |||||||||||||||||||| |||||||||    
T  49966221 agagatccatagtgatctagatta-tgggcttcagccttgcagagagagacccttggtggtctggatatgggtgacgaccttgaggtgatttggtaccac 49966123  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  49966122 atgcatatatgtgtcg 49966107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 35523911 - 35524127
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  35523911 catcatagtcgagttgagatttgataagatgtttttgttgcatctttgggctccggcctagcagagatcatttagtgatctagtttggtggacttcggtc 35524010  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||| |||| ||||||||||    
T  35524011 ttgcagagatccttagtgatctagatttgtgggctccggccttgcagagacctttgacggtctagatataggtgacgaccttgaagtgaaatggtaccac 35524110  T
Q  200 atgcatatatgtgtcgg 216  Q
    |||||||||||||||||    
T  35524111 atgcatatatgtgtcgg 35524127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 21716878 - 21716662
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctag-tttggggacttcggtc 99  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| |||||| ||  |||| |||||||||||    
T  21716878 catcatagtcgagttgagatttgataagatgtttttgttgcatctttgggctccggcctagcagagatcatttagtgatttaaatttgtggacttcggtc 21716779  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| | || ||||||||||||||||||||||||||| | ||||||||||||    
T  21716778 ttgcagagatccttagtgatctagatttgtgggctctggccttgcagagacctttgacggtctagatataggtgacgaccttgagataatatggtaccac 21716679  T
Q  200 atgcatatatgtgtcgg 216  Q
    |||||||||||||||||    
T  21716678 atgcatatatgtgtcgg 21716662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 51657815 - 51658030
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggg-gacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||||||||||||||||||||||||||| ||||||||||||| |  ||||||| ||    
T  51657815 catcatagtcgtgttgagattttatatgatgtttttgttacatcattgggcttcggcctagcagagatcatttagtgatctagttttgtagacttcgatc 51657914  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||||| | |  |||||||||||||||||||||||||  |||| |||||||||    
T  51657915 ttgcagagatccgttagtgatctagatt-gtaggcttcggccttgcagagacctttggcggtctagatataggtgacgaccttggagtgaaatggtacca 51658013  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  51658014 catgcatatatgtgtcg 51658030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 27673525 - 27673312
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||  |  ||| ||||||||||||||| |||||||||||| |||||||||||||| || ||| |  ||    
T  27673525 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggcttcggccttgcagagatcatttagtgatctagtttgtgggctttgtcct 27673426  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| | | |||||||||||||||||||| |||||| ||||  |||||||||    
T  27673425 tgcagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctttggtggtctagatataggtgacgcccttgaagtgagttggtaccac 27673327  T
Q  200 atgcatatatgtgtc 214  Q
    |||||||||||||||    
T  27673326 atgcatatatgtgtc 27673312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 20956457 - 20956671
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||| ||||||| |||||||||||||||||||  |  ||| ||||||||||||||| |||||||||||| |||||||||||||| || |||| | ||    
T  20956457 catcataatcgtgttaagattttatatgatgtttttgttgcatcattgggcttcggccttgcagagatcatttagtgatctagtttgtgggcttcagcct 20956556  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| || ||||||||||||  ||||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||| |||||||||    
T  20956557 tgcagagatccattggtgatctagatta-tgggcttcggccttgcagagacctttggtggtctagatataggtgacgaccttgaagtgatttggtaccac 20956655  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  20956656 atgcatatatgtgtcg 20956671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 22836741 - 22836955
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||  |  ||| ||||||||||||||| |||||||||||| |||||||||||||| || | |||  |     
T  22836741 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggcttcggccttgcagagatcatttagtgatctagtttgtgggcatcgacca 22836840  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||||||||| | | || |||||||||||||||||||||||| ||||| |||||||||    
T  22836841 tgcagaaatccattagtgatctagatt-gtgggcttcggccttgcagagacctttggtgttctagatataggtgacgaccttgaagtgatttggtaccac 22836939  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  22836940 atgcatatatgtgtcg 22836955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 2422568 - 2422776
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  || ||||||||||||| || | ||||||| ||  ||||||| |||||||    
T  2422568 catcatagtcgtgttgagattttatatgatgttttattcattattaggccccgacctagcagagatcttttgagatctag-ttatggacttcagtcttgc 2422666  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    ||||||| || | ||||||| ||||||| |||||| ||||||||| || |   |||| | ||||| ||||||||| |||||||||| |||||||||||||    
T  2422667 agagatcttttgagatctag-tttgtggacttcggtcttgcagaggcccttagtggtttggatatgggtgacgactttgaggtgatttggtaccacatgc 2422765  T
Q  204 atatatgtgtc 214  Q
    |||||||||||    
T  2422766 atatatgtgtc 2422776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 64 - 215
Target Start/End: Original strand, 22407788 - 22407938
Alignment:
Q  64 agagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtcta 163  Q
    ||||||| |||||||| ||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||   | ||||||     
T  22407788 agagatccttagtgatatagtttgtggacttcggtcttgtagagatccatagtgatctagatt-gtgggcttcggccttgtagagacccatggtggtctg 22407886  T
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  22407887 gatatgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 22407938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 5769813 - 5769923
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  5769813 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgttgggattaggcgcatatcatattggcatgagtcttatttgttgcatgtgaatgatg 5769912  T
Q  270 attgttgatga 280  Q
    | |||||||||    
T  5769913 actgttgatga 5769923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 5471983 - 5472109
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||| ||| ||||| |||||||||    
T  5471983 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggattaggagtatatcatattagcatgagtcttatttgctgcatttgaatgatg 5472082  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
     ||||||||||||||||| ||||||||    
T  5472083 gttgttgatgataagtgtatttgatga 5472109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 77630 - 77758
Alignment:
Q  169 aggtgacgacctt-gaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatga 267  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||| ||||||||  |||| ||    
T  77630 aggtgacgacctttgaggtgatttggtaccacatgcatatatgtgtcgtgtataggcgcatatcatattggcatgagtcttagttgttgcacatgaagga 77729  T
Q  268 tgattgttgatgataagtgtgtttgatga 296  Q
    |||||||| ||||||||||||||||||||    
T  77730 tgattgttaatgataagtgtgtttgatga 77758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 22407686 - 22407832
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtctt 101  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  22407686 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgagctccggcctagcagagatcattggtgatctagtttgtggacttcggtctt 22407785  T
Q  102 gcagagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    | |||||||||||||||| ||| ||||||| |||||| |||| |||||    
T  22407786 gtagagatccttagtgatatag-tttgtggacttcggtcttgtagaga 22407832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 41213266 - 41213390
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| || ||  |||| ||||||||||||||||||     
T  41213266 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggattaggcacatatcatattgacatgacacttatttgttgcatgtgaatgatt 41213365  T
Q  270 attgttgatgataagtgtgtttgat 294  Q
    |||| | ||||||  ||||||||||    
T  41213366 attgattatgatatatgtgtttgat 41213390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 20821521 - 20821392
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattg-ttgcatgtgaatga 267  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||| || ||  ||||||||||    
T  20821521 ggtgacgaccttgaggtgatttgataccacatgcatatatgtgtcgggaataggcgcatagcataattggcatgagtcttaactgtttatatgtgaatga 20821422  T
Q  268 tgattg-ttgatgataagtgtgtttgatga 296  Q
    |||||| |||||||||||||||||||||||    
T  20821421 tgattgtttgatgataagtgtgtttgatga 20821392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 37235559 - 37235683
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||   | ||||||||| |||| ||| || |||||||| |||| |||| ||| ||||    
T  37235559 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcaa-actaggcgcatttcatgttgacatgagtcttatttgtggcatatgactgat 37235657  T
Q  269 gattgttgatgataagtgtgtttgat 294  Q
    ||||||||||||||||||||||||||    
T  37235658 gattgttgatgataagtgtgtttgat 37235683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 170 - 292
Target Start/End: Original strand, 22144991 - 22145110
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| | | ||  ||||||| ||| |||||||||||||||    
T  22144991 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaggcgcatatcat-tagacataagtcttatttg-tgcatgtgaatgatg 22145087  T
Q  270 attgttgatgataagtgtgtttg 292  Q
    |||||||||||||| ||||||||    
T  22145088 attgttgatgataaatgtgtttg 22145110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 40437904 - 40438010
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggc-acgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| |  | ||||| ||||||||||||||||||||||||| |||||||||||||||     
T  40437904 tggtaccacatgcatatatgtgtcggaattaggcgcataacatatttgatatgagtcgtaattgttgcatgtgaatgatgattattgatgataagtgtgc 40438003  T
Q  290 ttgatga 296  Q
    |||||||    
T  40438004 ttgatga 40438010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 21193735 - 21193609
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||  || |||| |||||| || |||||| ||||||   |||| |||||||||||||    
T  21193735 aggtgacaaccttgaggtgatttggtaccacatgcatatatgtgtc-agactaggtgcatattatgttggcatgagtctcgtttgtggcatgtgaatgat 21193637  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    |||| ||||||||| |||  ||||||||    
T  21193636 gattattgatgatacgtgcatttgatga 21193609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 2422462 - 2422528
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||    
T  2422462 catcatagtcgtgttgagattttatatgatgttttattcattattaggccccgacctagcagagatc 2422528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 22250465 - 22250558
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagat 125  Q
    |||||||||||| ||||||||||||||||||||||||||| || | ||||||||||  |||||||||||| ||||||||| || | |||||||||    
T  22250465 gatgttttattcgttattgggcttcggcctagcagagatcttttgagatctagttt-tggacttcggtctagcagagatcttttgagatctagat 22250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 49998933 - 49999019
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||  || ||||| |||||||||||| |||||||| ||||||||    
T  49998933 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattaacatgagtcgtaattgttgcatatgaatgataattgttga 49999019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 22365409 - 22365329
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||  |||||||||||| |||||||||    
T  22365409 atgatgttttattcattattgggcttcggcctggcagagatcttttgagatctagttt-tggacttcggtctagcagagatc 22365329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 21651444 - 21651525
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||  || |||||| || |||||||||    
T  21651444 atgatgttttattcattattgggctccggcctagcagagatcttttgggatctagttttagggcttcggcctggcagagatc 21651525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 52398236 - 52398150
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| || |||| || ||||| |||||  || ||||||||||| ||||||||    
T  52398236 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcacattgacatgagtcgtaattaatgtatgtgaatgataattgttga 52398150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 18506011 - 18505954
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagttt 86  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||    
T  18506011 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttt 18505954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 9785742 - 9785837
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagat 125  Q
    ||||||||||||||||||||||| |||||||||||||||||| || | | |||||||| ||| |||||  || ||||||||| || | |||||||||    
T  9785742 atgatgttttattcattattgggtttcggcctagcagagatcttttgagttctagttttggg-cttcgtcctagcagagatcttttgagatctagat 9785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 18505913 - 18505874
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18505913 gatgttttattcattattgggcttcggcctagcagagatc 18505874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 29217654 - 29217595
Alignment:
Q  218 attaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    |||||||||||||||||||| || ||||| ||||||| ||||||||||||| ||||||||    
T  29217654 attaggcgcatatcatattgacatgagtcgtaattgtagcatgtgaatgataattgttga 29217595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 9785892 - 9785942
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  9785892 gatatgggtgacgaccttgaggagatttggtaccacatgcatatatgtgtc 9785942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 41210700 - 41210643
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagttt 86  Q
    |||||||||||||||||||||||||  ||||||||||||||| || | ||||||||||    
T  41210700 atgatgttttattcattattgggctctggcctagcagagatcttttgagatctagttt 41210643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 18505862 - 18505814
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtg 212  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  18505862 gatatgggtgacgaccttgaggagatttggtaccacatgcatatatgtg 18505814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 20895201 - 20895248
Alignment:
Q  39 attcattattgggcttcggcctagcagagatcattagtgatctagttt 86  Q
    |||||||||||||||||||||||||||||||| || | ||||||||||    
T  20895201 attcattattgggcttcggcctagcagagatcttttgagatctagttt 20895248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 20895383 - 20895433
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| |||| |||| ||||||||||||||||||||||||    
T  20895383 gatatgggtgacgaccctgagatgatttggtaccacatgcatatatgtgtc 20895433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 5676199 - 5676240
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatg 210  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  5676199 aggtgacgaccttgaggtgatacggtaccacatgcatttatg 5676240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 35053407 - 35053362
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  35053407 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 35053362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 38035221 - 38035264
Alignment:
Q  171 gtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||  |||||||||||||| ||||||||    
T  38035221 gtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 38035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 36357938 - 36357980
Alignment:
Q  172 tgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||  |||||||||||||| ||||||||    
T  36357938 tgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 36357980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 46144351 - 46144277
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaat 265  Q
    ||||||||||||||| || ||||||  |||||||| ||| ||||||  || ||||| ||||||||||| ||||||    
T  46144351 tggtaccacatgcatgtacgtgtcgaaattaggcgtataacatattaacatgagtcgtaattgttgcaggtgaat 46144277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 13378359 - 13378404
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| || |||||    
T  13378359 aggtgacgaccttgaggtgattcggtaccacatgcatttaggtgtc 13378404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 19601749 - 19601704
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||| ||||    
T  19601749 aggtgacgaccttgaggtgattcggtaccacatgcatttatatgtc 19601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 20444312 - 20444267
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||    
T  20444312 aggtgacgaccttttggagatttggtaccacatgcatatatgtgtc 20444267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 21858211 - 21858178
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctag 62  Q
    ||||||||||||||||||||||||| ||||||||    
T  21858211 atgatgttttattcattattgggctccggcctag 21858178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 37846064 - 37846109
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||    
T  37846064 aggtgacgaccttttggagatttggtaccacatgcatatatgtgtc 37846109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 41218018 - 41217978
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatat 209  Q
    |||||||||||||||||||||  ||||||||||| ||||||    
T  41218018 aggtgacgaccttgaggtgatccggtaccacatgtatatat 41217978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 12951725 - 12951431
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||| ||||||||||||||||||||  |  ||| |||||||||| |||| |||||||||||| ||| |||||||||| || ||| || ||    
T  12951725 catcatagtcgtgtcgagattttatatgatgtttttgttgcatcattgggcttcagccttgcagagatcatttagttatctagtttgtgggctttggcct 12951626  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |  |||||||| |||||||| |||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||  ||||||||    
T  12951625 ttgagagatccattagtgatatagatt-gtgggcttcggccttgcagagacctttggtggtctagatataggtgacgaccttgaagtgattcggtaccac 12951527  T
Q  200 atgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||| | | || | ||||||||| ||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  12951526 atgcatatatgtgtc-gaactacgtgcatatcatgttgacatgagtcttatttgctgcatgtgaatgatgattgttgatgataagtgtgtttgatga 12951431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 16183499 - 16183709
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||||| |||  ||||||||||||||    
T  16183499 catcatagtcgggttgagattttatatgatgttttattcataattgtgctccggcctagcagagatcatttgtgatctag-ttgtagacttcggtcttgc 16183597  T
Q  104 agagatccttagtgatctagatttgtgggcttc-ggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatg 202  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| | | | |||||| ||||| ||||||||| |||||||||| ||||||||||||    
T  16183598 agagatccttagtgatctagattt-tgggcttcaggccttgcagagatccttggtggtctggatatgggtgacgactttgaggtgatttggtaccacatg 16183696  T
Q  203 catatatgtgtcg 215  Q
    |||||||||||||    
T  16183697 catatatgtgtcg 16183709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 17138139 - 17137927
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||  |  ||| ||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  17138139 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattaggcttcggccttgcagagatcatttagtgatctagtttgtggacttcggtct 17138040  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||  ||||||| |||||||||||||||| | ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  17138039 tgcagagatccgttagtgatctagatg-gtgggctccggccttgcagagacctttgatggtctagatataggtgacaaccttgaagtgaaatggtaccac 17137941  T
Q  200 atgcatatatgtgt 213  Q
    ||||||||||||||    
T  17137940 atgcatatatgtgt 17137927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 14287767 - 14287552
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||||||| |||||||||| |||||||| ||||||||||||| | |||||||||||    
T  14287767 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggctccggcctagcatagatcatttagtgatctagttttgtggacttcggtc 14287668  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||| | || |||||||||||||||||||||||||| |||| |||||||||    
T  14287667 ttgcagagatccattagtgatctagatt-gtgggcttcgtccttgcagagacctttgacggtctagatataggtgacgaccttgaagtgaaatggtacca 14287569  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  14287568 catgcatatatgtgtcg 14287552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 53900006 - 53900222
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  53900006 catcatagtcgagttgagatttcataagatgtttttgttgcatctttgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtc 53900105  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||| |||| ||||||||||    
T  53900106 ttgcagagatccttagtgatctagatttgtgggctccggccttgcagagacctttgacggtctagatataggtgacgaccttgaagtgaaatggtaccac 53900205  T
Q  200 atgcatatatgtgtcgg 216  Q
    ||||||||||| |||||    
T  53900206 atgcatatatgcgtcgg 53900222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 6148314 - 6148500
Alignment:
Q  26 tatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagat 125  Q
    |||||||||||||||||||  ||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||     
T  6148314 tatatgatgttttattcatatttgggctccgacctagcagagatcattggtgatctagtttgtggacttcggtcttgcagagatccatagtgatctaga- 6148412  T
Q  126 ttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||||||| | | |||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||    
T  6148413 ttgtgggcttcggccttgcagagacccttggtggtctggat-tgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc 6148500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 11062521 - 11062735
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattc--attattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||| ||||||||||||||||||||||||  |   || |||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  11062521 catcatagtcatgttgagattttatatgatgtttttgttgtatcattgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtc 11062620  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| | |||||||    
T  11062621 ttgcagaaatccattagtgatctagatt-gtgggcttcggccttgcagagacctt-gatggtctagatataggtgacgaccttgaagtgaaacggtacca 11062718  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  11062719 catgcatatatgtgtcg 11062735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 14297171 - 14296955
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctag-tttggggacttcggtc 99  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  ||||||| | ||||||||||||||||| ||| |||||| |||| ||||||||| |    
T  14297171 catcatagtcgagttgagatttaataagatgtttttgttgcatctttgggctccagcctagcagagatcatttagtcatctagatttgtggacttcggcc 14297072  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  14297071 ttgcagagatccttagtgaactagatttgtgggctccggccttgcagagacctttgacggtctagatataggtgacgaccttgaggtgatatggtaccac 14296972  T
Q  200 atgcatatatgtgtcgg 216  Q
    ||||||||| |||||||    
T  14296971 atgcatatacgtgtcgg 14296955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 14302798 - 14302582
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctag-tttggggacttcggtc 99  Q
    ||||||||||| |||||||||| ||| ||||||||  |  |||  ||||||| | ||||||||||||||||| ||| |||||| |||| ||||||||| |    
T  14302798 catcatagtcgagttgagatttaataagatgtttttgttgcatctttgggctccagcctagcagagatcatttagtcatctagatttgtggacttcggcc 14302699  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  14302698 ttgcagagatccttagtgaactagatttgtgggctccggccttgcagagacctttgacggtctagatataggtgacgaccttgaggtgatatggtaccac 14302599  T
Q  200 atgcatatatgtgtcgg 216  Q
    ||||||||| |||||||    
T  14302598 atgcatatacgtgtcgg 14302582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 35122360 - 35122144
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    ||||||||||| ||||||| || ||| ||||||||  |  |||  ||||||| |||| |||||||||||||| ||||||||||||| | |||||||||||    
T  35122360 catcatagtcgagttgagaattgataagatgtttttgttgcatctttgggctccggcatagcagagatcatttagtgatctagttttgtggacttcggtc 35122261  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||| | || |||||||||||||||||||||||||| |||| ||||||||||    
T  35122260 ttgcagagatccttagtgatctagatttgtgggctccgaccttgcagagacctttgacggtctagatataggtgacgaccttgaagtgaaatggtaccac 35122161  T
Q  200 atgcatatatgtgtcgg 216  Q
    |||||||||||||||||    
T  35122160 atgcatatatgtgtcgg 35122144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 11883753 - 11883967
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    ||||||||||||||||||||||| |||||||||||  |  ||| ||||||||||||||| |||||||||||| |||||||||||||| || ||| |  ||    
T  11883753 catcatagtcgtgttgagattttgtatgatgtttttgttgcatcattgggcttcggccttgcagagatcatttagtgatctagtttgtgggctttgtcct 11883852  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||||| |||| ||||| |||||||||    
T  11883853 tgcagagatccattagtgatctagattt-tgggcttcggccttgcagagacctttggtggtctagatataggtgacgactttgaagtgatttggtaccac 11883951  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  11883952 atgcatatatgtgtcg 11883967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 12562965 - 12563180
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    ||||||||||||||||||| |||||||||||||||  |  ||| |||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  12562965 catcatagtcgtgttgagaatttatatgatgtttttgttgcatcattgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtc 12563064  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    ||| |||||||| |||| |||||||||| || ||||||||||||||||||||| | || | |||||||||||||||||||||||| |||| |||||||||    
T  12563065 ttgtagagatccattagagatctagatt-gtaggcttcggccttgcagagacctttgacgatctagatataggtgacgaccttgaagtgaaatggtacca 12563163  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  12563164 catgcatatatgtgtcg 12563180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 17099387 - 17099243
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  17099387 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcattggtgatatagtttgtggacttcggtcttgc 17099288  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    |||||||||||||||||||| ||||||  |||||| ||||||||||    
T  17099287 agagatccttagtgatctag-tttgtgaacttcggtcttgcagaga 17099243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 40938404 - 40938190
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||  ||||||||||||  |  ||| |||||||| || |||||||||||||||| ||||||||||||| | |||||||||||    
T  40938404 catcatagtcgtgttgagattg-atatgatgtttttgttgcatcattgggctccgacctagcagagatcatttagtgatctagttttgtggacttcggtc 40938306  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    || ||||||||| ||||||||||||||| |||||||||||||||||||||||| | || |||||||||||| ||||||||||||| |||| |||||||||    
T  40938305 tttcagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctttgacggtctagatataagtgacgaccttgaagtgaaatggtacca 40938207  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  40938206 catgcatatatgtgtcg 40938190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 14292082 - 14291911
Alignment:
Q  46 attgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtcttgcagagatcc-ttagtgatctagatttgtgggcttcggcctt 142  Q
    |||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  14292082 attgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtcttgcagagatccattagtgatctagatt-gtgggcttcggcctt 14291984  T
Q  143 gcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||| | || |||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  14291983 gcagagacctttgacggtctagatataggtgacgaccttgaagtgaaatggtaccacatgcatatatgcgtcg 14291911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 52 - 217
Target Start/End: Original strand, 14522885 - 14523052
Alignment:
Q  52 cttcggcctagcagagatc-attagtgatctagtttgg-ggacttcggtcttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagag 148  Q
    |||||| || ||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  14522885 cttcggtcttgcagagatccattagtgatctagttttgtggacttcggtcttgcagagatccattagtgatctagatt-gtgggcttcggccttgcagag 14522983  T
Q  149 accgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcggg 217  Q
    ||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14522984 acctttgacggtctagatataggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcggg 14523052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 17099299 - 17099137
Alignment:
Q  52 cttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagacc 151  Q
    |||||| || ||||||||| |||||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  17099299 cttcggtcttgcagagatccttagtgatctagtttgtgaacttcggtcttgcagagatccatagtgatctagatt-gtgggcttcggccttgcagagacc 17099201  T
Q  152 gtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
     | | |||||||||||| |||||| ||||||||| ||| |||||||||||||||||||||||||    
T  17099200 cttggtggtctagatatgggtgacaaccttgaggagatttggtaccacatgcatatatgtgtcg 17099137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 39654589 - 39654376
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||  |  ||| ||||||||||||| | |||||||||||| |||||||||||||| || |||||  ||    
T  39654589 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggcttcggcattgcagagatcatttagtgatctagtttgtgggcttcgacct 39654490  T
Q  101 tgcagagatcctt-agtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| | ||||||||||||| ||||||||||| |||||||||||| | | ||||||||||||||||||| ||||||| ||||| ||||||||     
T  39654489 tgcagagatccatcagtgatctagatt-gtgggcttcggtcttgcagagacctttggtggtctagatataggtgacaaccttgaagtgatttggtaccat 39654391  T
Q  200 atgcatatatgtgtc 214  Q
    |||||| ||||||||    
T  39654390 atgcatgtatgtgtc 39654376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 17536533 - 17536651
Alignment:
Q  98 tcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacc 197  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||    
T  17536533 tcttgtagagatccttagtgatctagacttgtgggcttcggccttgcagagacctttgacagtctagatataggtgacgaccttgaggtgatatggtacc 17536632  T
Q  198 acatgcatatatgtgtcgg 216  Q
    |||||||||||||||||||    
T  17536633 acatgcatatatgtgtcgg 17536651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 5229675 - 5229804
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattg-ttgcatgtgaatga 267  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||| || |||||||||||    
T  5229675 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggaatatgcgcatatcatattggcatgagtcttaattgtttacatgtgaatga 5229774  T
Q  268 tgattg-ttgatgataagtgtgtttgatga 296  Q
    |||||| |||||||||||||||||||||||    
T  5229775 tgattgtttgatgataagtgtgtttgatga 5229804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 30205127 - 30204927
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatc-attagtgatctagtttggggacttcggtcttg 102  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||  || | ||||||| ||| ||||||||||||||    
T  30205127 catcatagtcgtgttcagattttacatgatgttttattcattattgggctccggcctagcagagatctttttgagatctag-ttgtggacttcggtcttg 30205029  T
Q  103 cagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatg 202  Q
    |||||||| || | ||||||| ||||| | ||| || |||||||||||| | | |||||| |||   |||||||||||||||||||| ||||||||||||    
T  30205028 cagagatcttttgagatctag-tttgtagactttggtcttgcagagacccttggtggtctggattcgggtgacgaccttgaggtgatttggtaccacatg 30204930  T
Q  203 cat 205  Q
    |||    
T  30204929 cat 30204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 41660180 - 41660055
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| |||||||||    
T  41660180 ggtgacgatcttgaggtgatttggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcatgagtc-tatttgttgcatttgaatgatg 41660082  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
     ||||||||||||||||| ||||||||    
T  41660081 gttgttgatgataagtgtatttgatga 41660055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 38377413 - 38377541
Alignment:
Q  169 aggtgacgaccttga-ggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatga 267  Q
    ||||||||||||| | |||||| |||||||||||||||||||| |||| |  ||| ||||||||||||||||| |||||||| |||||||| ||||||||    
T  38377413 aggtgacgacctttaaggtgatttggtaccacatgcatatatgcgtcgtgtatagacgcatatcatattggcatgagtcttagttgttgcacgtgaatga 38377512  T
Q  268 tgattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||||||||    
T  38377513 tgattgttgatgataagtgtgtttgatga 38377541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 15516321 - 15516159
Alignment:
Q  48 tgggcttcggcctagcagagatcattag-tgatctagtttggggacttcggtcttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgca 145  Q
    |||||||| |||| |||||||||||| | |||||||||||| || ||| || ||||||||||||| |||||||| |||||| ||||||| ||||||||||    
T  15516321 tgggcttcagccttgcagagatcatttggtgatctagtttgtgggctttggccttgcagagatccattagtgatttagatt-gtgggctccggccttgca 15516223  T
Q  146 gagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatat 209  Q
    |||||| | | ||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  15516222 gagacctttggtggtctagatataggtgacgaccttgaagtgatttcgtaccacatgcatatat 15516159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 15989550 - 15989425
Alignment:
Q  169 aggtgacgacctt-gaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatga 267  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| ||| |  ||||| ||||| |||||| ||||||||||| ||||||||||| |||||    
T  15989550 aggtgacgacctttgaggtgatttggtaccacatgcatatatgtatcgtgtataggcacatataatattgacacgagtcttagttgttgcatgtaaatga 15989451  T
Q  268 tgattgttgatgataagtgtgtttga 293  Q
    |||||||| |||||||||||||||||    
T  15989450 tgattgttaatgataagtgtgtttga 15989425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 14522793 - 14522943
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattc--attattgggcttcggcctagcagagatcattag-tgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||| ||||||||||||  |   ||||||||||| |||| |||||||||||||| | ||||||||||| | |||||||||||    
T  14522793 catcatagtcgtgttgagatttgatatgatgtttttgttgaattattgggctccggcttagcagagatcatttggtgatctagttttgtggacttcggtc 14522892  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    |||||||||||| |||||||||||| ||||||| |||||| ||||||||||    
T  14522893 ttgcagagatccattagtgatctagttttgtggacttcggtcttgcagaga 14522943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 22145757 - 22145868
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| || | ||||||||||| |||||||||| ||||    
T  22145757 catcatagtcgtgttgagattttatatgatgttttattca-tattgggcttcaacctagcagagatcttttgagatctagtttgtggacttcggtattgc 22145855  T
Q  104 agagatccttagt 116  Q
    ||||  |||||||    
T  22145856 agaggcccttagt 22145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 17320193 - 17320299
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||| | || ||||| ||||||||||||||||||||||||| |||||||||||||||     
T  17320193 tggtaccacatgcatatatgtggcggaattaggcgcatagcatatttgacatgagtcgtaattgttgcatgtgaatgatgattattgatgataagtgtgc 17320292  T
Q  290 ttgatga 296  Q
    |||||||    
T  17320293 ttgatga 17320299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 43429153 - 43429259
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    ||||||||||||||||||||||| || |||||||||||| |||||| | || ||||| ||||||||||||||||||||||| |||||||||||||||||     
T  43429153 tggtaccacatgcatatatgtgttggaattaggcgcataacatatttgacatgagtcataattgttgcatgtgaatgatgaatgttgatgataagtgtgc 43429252  T
Q  290 ttgatga 296  Q
    |||||||    
T  43429253 ttgatga 43429259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 194 - 296
Target Start/End: Original strand, 21168336 - 21168439
Alignment:
Q  194 taccacatgcatatatgtgtcgggattaggcgcatatcatatt-ggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttg 292  Q
    |||||||||||| |||||||||| |||| ||||||| |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||  ||||    
T  21168336 taccacatgcatgtatgtgtcggaattaagcgcataacatatttggcatgagtcgtaattgttgcatgtgaatgatgattgttgatgataagtgcatttg 21168435  T
Q  293 atga 296  Q
    ||||    
T  21168436 atga 21168439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 15516408 - 15516260
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgtttt--attcattattgggcttcggcctagcagagat-cattagtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||||||||||||   | ||| |||||||||||| || | |||||| |||||||||||||||||| || |||| | ||    
T  15516408 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggcttcggtcttggagagatccattagtgatctagtttgtgggcttcagcct 15516309  T
Q  101 tgcagagatc-cttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||||||  || ||||||||| ||||||||||| |||||||||||||    
T  15516308 tgcagagatcatttggtgatctag-tttgtgggctttggccttgcagaga 15516260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 11199103 - 11199190
Alignment:
Q  129 tgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcggg 217  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  11199103 tgggctccggccttgcagagacctt-gatggtctagatataggtgacgaccttgaagtgaaatggtaccacatgcatatatgtggcggg 11199190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 38812589 - 38812699
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| | | |||| |||||||||  || || |||||||| | ||||||||||||||||    
T  38812589 aggtgacgaccttgaggtgatttggtacgacatgcatatatgtgtc-gaactaggtgcatatcatggtgacatgagtcttattggttgcatgtgaatgat 38812687  T
Q  269 gattgttgatga 280  Q
    ||||||||||||    
T  38812688 gattgttgatga 38812699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 4147289 - 4147375
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| ||||||| || |||||||||||| ||||||| || ||||| ||||||||||||||||||||| ||||||||    
T  4147289 tggtaccacatgcatgtatgtgttggaattaggcgcatagcatattgtcatgagtcgtaattgttgcatgtgaatgataattgttga 4147375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 6230255 - 6230341
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||| ||||| ||||||||||||||| ||||||||    
T  6230255 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattgacatgagtcgtaatttttgcatgtgaatgataattgttga 6230341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 214
Target Start/End: Original strand, 19572274 - 19572473
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttg 128  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | |||||||||| ||| |||||| || ||||||||| || | ||||||| ||||    
T  19572274 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttttggg-cttcggcctagcagagatcttttgagatctagttttg 19572372  T
Q  129 ----------------tgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtg 212  Q
                    ||||||||||||| ||||||| | | |  | ||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  19572373 atgttttattcgttattgggcttcggcctagcagagatccttg-ggatctggatatgggtgacgaccttgaggagatttggtaccacatgcatatatgtg 19572471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 17523894 - 17523978
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt-cattattgggcttcggcctagcagagatca-ttagtgatctagttt 86  Q
    |||||||||||||||||||||| |||||||||||| ||  || | |||||| ||||||||||||||||| |||||||||||||||    
T  17523894 catcatagtcgtgttgagatttgatatgatgttttgttgaatcaatgggctacggcctagcagagatcatttagtgatctagttt 17523978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 9592349 - 9592411
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||    
T  9592349 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaagcgcatatcat 9592411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 33370962 - 33371051
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatg 260  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||| |||| | ||||||| ||| || |||||||| |||| |||||    
T  33370962 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgt-tggactaggtggatatcatgttgacatgagtcttatttgtggcatg 33371051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 13816168 - 13816088
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | | |||||||| ||| |||||| || |||||||||    
T  13816168 atgatgttttattcattattgggctccggcctagcagagatcttttgaggtctagttttggg-cttcggcctagcagagatc 13816088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 15860649 - 15860730
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||| ||||||||||||||||||||||||||||||||||| || | |||||| |||  || |||||| || |||||||||    
T  15860649 atgatgatttattcattattgggcttcggcctagcagagatcttttgagatctatttttagggcttcggcctggcagagatc 15860730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 47983464 - 47983398
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattg 237  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||  |||||||    
T  47983464 aggtgacgaccttgaggtgattcggtaccacatgcatatatgtgtcgg--ttaggcgcattgcatattg 47983398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 48011324 - 48011258
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattg 237  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||  |||||||    
T  48011324 aggtgacgaccttgaggtgattcggtaccacatgcatatatgtgtcgg--ttaggcgcattgcatattg 48011258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 4163833 - 4163917
Alignment:
Q  193 gtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||| |||||||| | |||||||||||| ||||||  || || || ||||||||||||||||||||| ||| ||||    
T  4163833 gtaccacatgcatgtatgtgtcagaattaggcgcataacatattcacatgactcgtaattgttgcatgtgaatgataattattga 4163917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 14817312 - 14817375
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgt 254  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||| |||||||    
T  14817312 tggtaccacatgcatgtatgtgtcggaattaggcgcataacatattgacatgagtcgtaattgt 14817375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 47992751 - 47992704
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgg 216  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||    
T  47992751 aggtgacgaccttgaggtgattcggtaccacatgcatatatgtgtcgg 47992704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 48002038 - 48001991
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgg 216  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||    
T  48002038 aggtgacgaccttgaggtgattcggtaccacatgcatatatgtgtcgg 48001991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 11813410 - 11813360
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  11813410 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtc 11813360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 47786463 - 47786509
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  47786463 aggtgacgaccttgaggtgatatagtaacacatgcatatatgtgtcg 47786509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 319206 - 319251
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  319206 aggtgacgaccttgaggtgatctggtaccacatgcatttatgtgtc 319251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 22145814 - 22145925
Alignment:
Q  102 gcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacat 201  Q
    ||||||||| || | ||||||| ||||||| ||||||  |||||||| || |   | |||| ||||| ||||||||||||||||| || |||||||||||    
T  22145814 gcagagatcttttgagatctag-tttgtggacttcggtattgcagaggcccttagtagtctggatatgggtgacgaccttgaggtaatttggtaccacat 22145912  T
Q  202 gcatatatgtgtc 214  Q
    |||| ||||||||    
T  22145913 gcatttatgtgtc 22145925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 7852374 - 7852328
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  7852374 aggtgacgaccttgaggtgatttggtatcacatgcatgtatgtgtcg 7852328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 14060835 - 14060881
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  14060835 aggtgacgaccttgaggtgatttggtatcacatgcatatacgtgtcg 14060881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 17957842 - 17957919
Alignment:
Q  32 atgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||| |||| ||||||||||||  |||||||| || | ||||||||||  |||||||||||| |||||||||    
T  17957842 atgttttattcgttatagggcttcggcctgacagagatcttttgagatctagttt-tggacttcggtctagcagagatc 17957919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 25057521 - 25057421
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| | || ||||||| |||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  25057521 catcatagtcgtgttgagat-----acgatgttttattcgtcatagggcttcagcctggcagagatcttttgagatctagttt-tggacttcggtctagc 25057428  T
Q  104 agagatc 110  Q
    |||||||    
T  25057427 agagatc 25057421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 55442367 - 55442417
Alignment:
Q  173 gacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattagg 223  Q
    ||||||||||||||||| ||||||||||||||| ||||||||  |||||||    
T  55442367 gacgaccttgaggtgatctggtaccacatgcatttatgtgtcatgattagg 55442417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 8630413 - 8630368
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||||    
T  8630413 aggtgacgacctggaggtgatttggtaccacatgcatttatgtgtc 8630368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 14294101 - 14294068
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttt 37  Q
    ||||||||||||||||||||||||||||||||||    
T  14294101 catcatagtcgtgttgagattttatatgatgttt 14294068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 14299728 - 14299695
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttt 37  Q
    ||||||||||||||||||||||||||||||||||    
T  14299728 catcatagtcgtgttgagattttatatgatgttt 14299695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 15874731 - 15874686
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  15874731 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 15874686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 48420238 - 48420193
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  48420238 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 48420193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 50113720 - 50113765
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  50113720 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 50113765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 25057403 - 25057364
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  25057403 gatgttttattcattatagggcttcggcctggcagagatc 25057364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 17957989 - 17958039
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||  || ||| ||||||||||||||| ||||||||    
T  17957989 gatataggtgacgaccttttggagatttggtaccacatgcatttatgtgtc 17958039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 12351438 - 12351483
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||   ||||||||||||| ||||||||    
T  12351438 aggtgacgaccttgaggtgatccagtaccacatgcatttatgtgtc 12351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 12490331 - 12490376
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  12490331 aggtgacgaccttgagatgattcggtaccacatgcatttatgtgtc 12490376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 51160066 - 51160110
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgt 213  Q
    |||||||||||||  || ||| |||||||||||||||||||||||    
T  51160066 aggtgacgaccttttggagatttggtaccacatgcatatatgtgt 51160110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 131; Significance: 6e-68; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 256394 - 256603
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| || | ||||||||||| |||||||||||||||    
T  256394 catcatagtcgtgttgagattttatatgatgttttattcattattgggctctggcctagcagagatcttttgagatctagtttgtggacttcggtcttgc 256493  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    ||||||| || ||||||||| ||||||| |||||| |||| ||||||| | | |||||| |||  ||||||||||||||||||||| |||||||||||||    
T  256494 agagatcatttgtgatctag-tttgtggacttcggtcttgtagagacccttggtggtctggattcaggtgacgaccttgaggtgatttggtaccacatgc 256592  T
Q  204 atatatgtgtc 214  Q
    |||||||||||    
T  256593 atatatgtgtc 256603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 193265 - 193191
Alignment:
Q  36 tttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||||||||||||| || | | ||||||||  || |||||| || |||||||||    
T  193265 tttattcattattgggcttcggcctagcagagatcttttgaggtctagttttagggcttcggcctggcagagatc 193191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 76201 - 76275
Alignment:
Q  36 tttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||| ||||||||||||| || | | ||||||||  || |||||| || |||||||||    
T  76201 tttattcattattgggcttcgtcctagcagagatcttttgaggtctagttttagggcttcggcctggcagagatc 76275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 124794 - 124888
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctag 123  Q
    |||||| |||||||||||| |||||||||||| ||||||||| || | | ||||||||  || |||||| || ||||||||| || | |||||||    
T  124794 atgatgatttattcattatagggcttcggcctggcagagatcttttgaggtctagttttagggcttcggcctagcagagatcttttgagatctag 124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 124854 - 124930
Alignment:
Q  49 gggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagat 125  Q
    |||||||||||||||||||||| || | |||||||||   || ||||||||| | ||||||| || | |||||||||    
T  124854 gggcttcggcctagcagagatcttttgagatctagttatagggcttcggtctggtagagatcttttgagatctagat 124930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 32258 - 32048
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttgg-ggacttcggtct 100  Q
    |||||||||||||||||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||    
T  32258 catcatagtcgtgttgagatttgatatgatgtttttgttgcatcattgggctccggcctagcagagatcattggtgatctagttttgtggacttcggtct 32159  T
Q  101 tgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccaca 200  Q
    |||||||||     |||||||||||||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||    
T  32158 tgcagagat-----gtgatctagatttgtgggctccggccttgcagagacctttgacggtctagatataggtgacgaccttgaggtgaaatggtaccaca 32064  T
Q  201 tgcatatatgtgtcgg 216  Q
    ||||||||||||||||    
T  32063 tgcatatatgtgtcgg 32048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 38532323 - 38532108
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||| ||    
T  38532323 catcatagtcgtgttgagattttatatgatgtttttgttgcatcattgggcttcggcctaccagagatcatttagtgatctagtttggtggacttcgatc 38532224  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||| ||||| | | ||||||||||||||||||||||||||| |||||||||||||     
T  38532223 ttgcagagatccattagtgatccagattt-tgggcttcggccttgcaaagacctttggtggtctagatataggtgacgaccttgaagtgatatggtaccc 38532125  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  38532124 catgcatatatgtgtcg 38532108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 21679876 - 21679660
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttgg-ggacttcggtct 100  Q
    |||||||| ||||||||||||||||||||||||||  |  ||| |||||||| |||||||| |||||||||| |||||||||||| | ||||||||||||    
T  21679876 catcatagccgtgttgagattttatatgatgtttttgttgcatcattgggctccggcctagtagagatcattggtgatctagttttgtggacttcggtct 21679777  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||| | | || |||||||| ||||||||||||||||| |||| ||||||||||    
T  21679776 tgcagagatccattagtgatctagatt-gtgggcttcggccttgcagagatccttgacggtctagagataggtgacgaccttgaagtgaaatggtaccac 21679678  T
Q  200 atgcatatatgtgtcggg 217  Q
    ||||||||||||||||||    
T  21679677 atgcatatatgtgtcggg 21679660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 28543611 - 28543395
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagt-gatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||| ||||||| ||||||||||||  |  ||| |||||||| | ||||||||||||| ||| || |||||||||| | |||||||||||    
T  28543611 catcatagtcgtgtcgagatttgatatgatgtttttgttgcatcattgggctccagcctagcagagataatttgttgatctagttttgtggacttcggtc 28543512  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||    
T  28543511 ttgcagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctttgacggtctagatataggtgacgaccttgaggtgatatggtacca 28543413  T
Q  199 catgcatatatgtgtcgg 216  Q
    ||||||||||||||||||    
T  28543412 catgcatatatgtgtcgg 28543395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 8 - 215
Target Start/End: Original strand, 19994640 - 19994846
Alignment:
Q  8 atagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagag 107  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||   |||||||||| | |||||||||||||||||||    
T  19994640 atagtcgggttgagattttatatgatgttttattcataattgggctcaggcctagcagagaccatctatgatctagtt-gtggacttcggtcttgcagag 19994738  T
Q  108 atccttagtgatctagatttgtgggcttc-ggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcata 206  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||| | | |||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  19994739 atccttagtgatctagattt-tgggcttcaggctttgcagagacccttggtggtcttgatatgggtgacgaccttgaggtgatttggtaccacatgcata 19994837  T
Q  207 tatgtgtcg 215  Q
    |||||||||    
T  19994838 tatgtgtcg 19994846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 17730949 - 17731161
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  | | |||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||    
T  17730949 catcatagtcgtgttgagattttatatgatgtttttgttgcttcattgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtc 17731048  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| || | || ||||||   ||||||||||||||||| |||| |||||||||    
T  17731049 ttgcagagatccattagtgatctagatt-gtgggcttcggccttgcagaggcctttgaaggtcta---ataggtgacgaccttgaagtgaaatggtacca 17731144  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  17731145 catgcatatatgtgtcg 17731161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 22312235 - 22312109
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22312235 ggtgatgactttgaggtgatttggtaccacatgcatatatgtgtcggaattaggcgcatatcatattggcatgagtcttaattgttgcatgtgaatgatg 22312136  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||||||    
T  22312135 attgttgatgataagtgtgtttgatga 22312109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 25121134 - 25120968
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcag 146  Q
    ||||||||||||||  ||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  25121134 ttgggcttcggccttacagagatcatttgtgatctagtt-gtggacttcggtcttgcagagatccttcgtgatctagtttt-tgggcttcggccttgcag 25121037  T
Q  147 agaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||| | | |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  25121036 agacccttggtggtctggatatgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 25120968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 33170830 - 33170704
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  33170830 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcatgagtcttatgtgttgcatgtgaatgatg 33170731  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    | |||||| ||||||||||||||||||    
T  33170730 actgttgaagataagtgtgtttgatga 33170704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 20655508 - 20655682
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatg-ttttatt-cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||| ||| |||| |||| || ||| ||||| || ||||||||| ||||||||| |||||||||||||   |||||||||||    
T  20655508 catcatagtcgtgttgagatttgataagatggttttgttgcatcattggcctccggcctagctgagatcatttagtgatctagttttatggacttcggtc 20655607  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtga 174  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  20655608 ttgcagagatccttagtgatctagatttgtgggctccggccttgcagagacctttgatggtctagatataggtga 20655682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 25121217 - 25121074
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || |||||| ||| |    
T  25121217 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcatttgtgatctagtttttgggcttcggccttac 25121118  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || |||||||||  |||||| |||||| ||||||||||    
T  25121117 agagatcatttgtgatctag--ttgtggacttcggtcttgcagaga 25121074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 24238110 - 24237985
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| |  ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  24238110 ggtgacgaccttgagctgatttggtaccacatgcatatatgtgtcgtgtataggcgcatatcataattggcatgagtcttaattgttgcatgtgaatgat 24238011  T
Q  269 gattgttgatgataagtgtgtttgat 294  Q
    ||||||||||||||||||||||||||    
T  24238010 gattgttgatgataagtgtgtttgat 24237985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 11542906 - 11542783
Alignment:
Q  173 gacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgatt 272  Q
    ||||||||||||||||| || |||||| ||||||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  11542906 gacgaccttgaggtgatttgataccacgtgcatatatgtctcggaattaggcgcatataatattggcatgagtcttaattgttgcatgtgaattatgatt 11542807  T
Q  273 gttgatgataagtgtgtttgatga 296  Q
    ||||||||| ||||||||||||||    
T  11542806 gttgatgatgagtgtgtttgatga 11542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 22737367 - 22737579
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt-cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtctt 101  Q
    |||||||||| |||||||||||| ||||||||||| || ||| ||||||||||||||| ||||| |||||| |||||||||||||  || | | |  | |    
T  22737367 catcatagtcatgttgagattttttatgatgttttgttgcatcattgggcttcggccttgcagatatcatttagtgatctagtttatgggccttgaccct 22737466  T
Q  102 gcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccaca 200  Q
     ||||||||| ||||||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||||||   || |||| ||||||    
T  22737467 acagagatccattagtgatctagatt-gtgggcttcggccttgcagagacctta-atggtctagatataggtgacgaccttgaaaagaaatggcaccaca 22737564  T
Q  201 tgcatatatgtgtcg 215  Q
    |||||||||||||||    
T  22737565 tgcatatatgtgtcg 22737579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 18768254 - 18768466
Alignment:
Q  7 catagtcgtgttgagatttt-atatgatgtttta--ttcattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtcttg 102  Q
    ||||||||||||| |||||| ||||||||||||   ||||| |||| |||||||||| ||||| |||||| |||||||||||||| || ||| |  | ||    
T  18768254 catagtcgtgttgggatttttatatgatgtttttgtttcatcattgagcttcggccttgcagatatcatttagtgatctagtttgtgggctttgaccctg 18768353  T
Q  103 cagagatcct-tagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacat 201  Q
    |||||||||  |||||||||||||| |||||||||||||||| ||||||| | | |||||||||||||||||||||| |||| |||| ||||||||| ||    
T  18768354 cagagatccaatagtgatctagatt-gtgggcttcggccttgtagagacctttgttggtctagatataggtgacgactttgaagtgaaatggtaccatat 18768452  T
Q  202 gcatatatgtgtcg 215  Q
    |||| |||||||||    
T  18768453 gcatgtatgtgtcg 18768466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 170 - 292
Target Start/End: Original strand, 33612659 - 33612779
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||| ||| ||||||||||| ||| || ||||||||||||    
T  33612659 ggtgacgaccttgaggtgatttggtaccacatgcatatatatgtc-ggtttaggcgcatatcatgttgacacgagtcttatttg-tgtatgtgaatgatg 33612756  T
Q  270 attgttgatgataagtgtgtttg 292  Q
    |||||||||||||||||||||||    
T  33612757 attgttgatgataagtgtgtttg 33612779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 37655243 - 37655369
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||  | |||| ||||||||| ||| || |||||||| |||| |||||||||||||    
T  37655243 aggtgacgaccttgaggtgatttggcaccacatgcatatatgtgtcga-actaggtgcatatcatgttgacatgagtcttatttgtggcatgtgaatgat 37655341  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||||||| ||||||||    
T  37655342 gattgttgatgataagtgtctttgatga 37655369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 22498901 - 22499026
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||| || || |||||| ||||| |||||||||    
T  22498901 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgaatataggcgcatatcatattggcatgaatcctaattgatgcatttgaatgatg 22499000  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    |||||||||||| || |||||||||||    
T  22499001 attgttgatgat-agggtgtttgatga 22499026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 45560816 - 45560945
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat-attggcacgagtcttaattg-ttgcatgtgaatga 267  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||| |||||||||| ||| |||| || |||||||||||| || |||||||||||    
T  45560816 ggtgacgaccttgaggtgatttgttaccacatgcatgtatgtgtcgggaataggcgcataacataattgacatgagtcttaattgtttacatgtgaatga 45560915  T
Q  268 tgattgtt-gatgataagtgtgtttgatga 296  Q
    |||||||| |||||||||||||||||||||    
T  45560916 tgattgttcgatgataagtgtgtttgatga 45560945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 20648923 - 20649054
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagttt-ggggacttcggtc 99  Q
    ||||||||||  |||||||||| ||| ||||||||  |  |||  ||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||    
T  20648923 catcatagtcaagttgagatttgataagatgtttttgttgcatctttgggctccagcctagcagagatcatttagtgatctagttttggggacttcggtc 20649022  T
Q  100 ttgcagagatccttagtgatctagatttgtgg 131  Q
    ||||||||||||||||||||||||||||||||    
T  20649023 ttgcagagatccttagtgatctagatttgtgg 20649054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 24554191 - 24554293
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    ||||||||||||||| |||||||||| |||||||||||| |||||| | || ||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  24554191 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatatttgacatgagtcgtaattgttgcatgtgaatgataattattgatgataagtgtgt 24554290  T
Q  290 ttg 292  Q
    |||    
T  24554291 ttg 24554293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 20480348 - 20480267
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtt 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || | |||||||||    
T  20480348 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggccttgcagagatcttttgagatctagtt 20480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 16416935 - 16416836
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || |||||| ||||||||| || | ||||||| ||| |||||||||||||||    
T  16416935 catcatagtcgtgtggagattttatatgatgttttattcattattggcctccggccttgcagagatcttttgagatctag-ttgtggacttcggtcttgc 16416837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 23153407 - 23153525
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||| | | || |||||||| ||| ||||| |||||||||    
T  23153407 ggtgacgatcttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaggcgcatatcat-tagacatgagtcttatttg-tgcatatgaatgatg 23153503  T
Q  270 attgttgatgataagtgtgttt 291  Q
    | ||||| |||||| |||||||    
T  23153504 aatgttggtgataaatgtgttt 23153525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 25294568 - 25294445
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| | | |||  ||||||||   || || |||||||| |||| ||||||| |||||    
T  25294568 aggtgacgaccttgaggtgatttggtaccacatgcatatatgcgtc-gaactagatgcatatca---tgacatgagtcttatttgtggcatgtggatgat 25294473  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    ||||||| ||||||| ||||||||||||    
T  25294472 gattgttaatgataaatgtgtttgatga 25294445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 25756557 - 25756434
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| | | |||  ||||||||   || || |||||||| |||| ||||||| |||||    
T  25756557 aggtgacgaccttgaggtgatttggtaccacatgcatatatgcgtc-gaactagatgcatatca---tgacatgagtcttatttgtggcatgtggatgat 25756462  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    ||||||| ||||||| ||||||||||||    
T  25756461 gattgttaatgataaatgtgtttgatga 25756434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 20568758 - 20568848
Alignment:
Q  10 agtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggt 98  Q
    |||||||||||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  20568758 agtcgtgttgagatttgatatgatgtttttgttgcatcattgggctccggcctagcagagatcattggtgatctagtttgtggacttcggt 20568848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 20574951 - 20575041
Alignment:
Q  10 agtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggt 98  Q
    |||||||||||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  20574951 agtcgtgttgagatttgatatgatgtttttgttgcatcattgggctccggcctagcagagatcattggtgatctagtttgtggacttcggt 20575041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 268
Target Start/End: Original strand, 23116418 - 23116516
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  |  ||||| ||||||||||||||| || || |||||| ||||| ||||||||    
T  23116418 ggtgacgaccttgatgtgatttggtaccacatgcatatatgtgtcaagtataggcacatatcatattggcatgaatcctaattgatgcatttgaatgat 23116516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 20480264 - 20480170
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatt 126  Q
    |||||||||||| ||||||||||||||||| ||||||||  || | ||||||| ||| |||||||||||||||||||| |||||||| ||| ||||    
T  20480264 gatgttttattcgttattgggcttcggccttgcagagattttttgagatctag-ttgtggacttcggtcttgcagagacccttagtggtctggatt 20480170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 22322919 - 22322985
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  22322919 catcatagtcgtgttaaaattttatatgatgttttattcattattgggctccggccttgcatagatc 22322985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 16416880 - 16416766
Alignment:
Q  99 cttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| || | |||||||  |||||| |||||| |||||| | ||| |   |||||| ||| ||||||| |||||||||||||| ||||||||    
T  16416880 cttgcagagatcttttgagatctag--ttgtggacttcggtcttgcaaaaacctttagtggtctggatttaggtgatgaccttgaggtgatttggtacca 16416783  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  16416782 catgcatatatgtgtcg 16416766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 22323064 - 22323144
Alignment:
Q  133 cttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||| |||||||||||| | | |||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||||||    
T  22323064 cttcggtcttgcagagacccttggtggtctggatatgggtgacgaccttgaggagat-tggtaccacatgcatatatgtgtc 22323144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 20480243 - 20480122
Alignment:
Q  92 cttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatat 191  Q
    |||||| |||||||||||  || | |||||||  |||||| |||||| |||||||||||| |   |||||| |||  |||||||||| ||||||||||      
T  20480243 cttcggccttgcagagattttttgagatctag--ttgtggacttcggtcttgcagagacccttagtggtctggattcaggtgacgacattgaggtgattc 20480146  T
Q  192 ggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||||||    
T  20480145 ggtaccacatgcatatatgtgtcg 20480122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 24719070 - 24719121
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  24719070 gatatgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 24719121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 43375083 - 43375182
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttg 128  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | |||||||||   || |||||| || ||||||||| || | ||||| ||||||    
T  43375083 atgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttatagggcttcggcctggcagagatcttttgagatctggatttg 43375182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 41244203 - 41244157
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  41244203 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 41244157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 24108068 - 24108168
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| |||| |||||| ||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  24108068 catcatagtcgtgttgagat-----acgatgttttattcgttatagggctttggcctggcagagatcttttgagatctagttt-tggacttcggtctagc 24108161  T
Q  104 agagatc 110  Q
    |||||||    
T  24108162 agagatc 24108168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 6775733 - 6775774
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  6775733 atgatgttttattcattattgggctccggcctagcagagatc 6775774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 21696127 - 21696063
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||  |||||||  ||||||||    
T  21696127 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtcatgattagggacatatcat 21696063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 275
Target Start/End: Complemental strand, 24266582 - 24266498
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgtt 275  Q
    ||||||||||||||| ||||||| |  |||||||||||| ||||||| || | ||| ||| | ||||||||||||||| ||||||    
T  24266582 tggtaccacatgcatgtatgtgttgatattaggcgcatagcatattgacatgtgtcgtaactattgcatgtgaatgataattgtt 24266498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 39448419 - 39448483
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||  |||||||  ||||||||    
T  39448419 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtcatgattagggacatatcat 39448483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 7468831 - 7468764
Alignment:
Q  190 atggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttg 256  Q
    |||||||||||||||| |||||||||| |||||||||||| |||| ||| || ||||| |||||||||    
T  7468831 atggtaccacatgcatgtatgtgtcggaattaggcgcatagcatatttgacatgagtcgtaattgttg 7468764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 13664119 - 13664219
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||  |||| |||||| ||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  13664119 catcatagtcgtgttgagat-----acgatgttttatttgttatagggctttggcctggcagagatcttttgagatctagttt-tggacttcggtctagc 13664212  T
Q  104 agagatc 110  Q
    |||||||    
T  13664213 agagatc 13664219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 13723394 - 13723494
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||  |||| |||||| ||||| ||||||||| || | ||||||||||  |||||||||||| ||    
T  13723394 catcatagtcgtgttgagat-----acgatgttttatttgttatagggctttggcctggcagagatcttttgagatctagttt-tggacttcggtctagc 13723487  T
Q  104 agagatc 110  Q
    |||||||    
T  13723488 agagatc 13723494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 22007962 - 22008062
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| | || ||||||||||||  |||||||| || | ||||||||||  |||||||||||| ||    
T  22007962 catcatagtcgtgttgagat-----acgatgttttattcgtcatagggcttcggcctgacagagatcttttgagatctagttt-tggacttcggtctagc 22008055  T
Q  104 agagatc 110  Q
    |||||||    
T  22008056 agagatc 22008062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 22323003 - 22323085
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatcctt 113  Q
    |||||||||||| |||||| ||| || ||||| ||||||  || | ||||||||||| | |||||||||||||||||| ||||    
T  22323003 gatgttttattccttattgtgctccgacctagtagagatattttgagatctagtttgtgaacttcggtcttgcagagaccctt 22323085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 23228947 - 23229020
Alignment:
Q  219 ttaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttg 292  Q
    ||||||||||||| | ||| || |||||||| |||||| ||||||||| ||||||| | |||||| ||||||||    
T  23228947 ttaggcgcatatcgtgttgacatgagtcttacttgttgtatgtgaatggtgattgtgggtgataaatgtgtttg 23229020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 24718919 - 24718960
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  24718919 atgatgttttattcattattgggctctggcctagcagagatc 24718960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 20655677 - 20655709
Alignment:
Q  183 aggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||||||||||||||||||||||||||||||    
T  20655677 aggtgatatggtaccacatgcatatatgtgtcg 20655709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 22908967 - 22909067
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||||||||||||     | |||||||||||| |||| ||| ||||| || ||||||||| || | ||| ||||||  |||||||||||| ||    
T  22908967 catcatagtcgtgttgagat-----acgatgttttattcgttatagggattcggtctggcagagatcttttgagatttagttt-tggacttcggtctagc 22909060  T
Q  104 agagatc 110  Q
    |||||||    
T  22909061 agagatc 22909067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 23118541 - 23118575
Alignment:
Q  263 aatgatgattgttgatgataagtgtgtttgatgat 297  Q
    |||||||||||||||||| ||||||||||||||||    
T  23118541 aatgatgattgttgatgaaaagtgtgtttgatgat 23118575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 29296463 - 29296373
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgat 281  Q
    ||||||||||||||| || ||||| |  ||||||||||  |||||||||| ||||| | || |||  |||| |||||| ||||||||||||    
T  29296463 tggtaccacatgcatgtaggtgtcagatttaggcgcattgcatattggcatgagtcgtgatggttatatgtaaatgataattgttgatgat 29296373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 270315 - 270270
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||    
T  270315 aggtgacgaccttttggagatttggtaccacatgcatatatgtgtc 270270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 645605 - 645650
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||    
T  645605 aggtgacgaccttttggagatttggtaccacatgcatatatgtgtc 645650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 831340 - 831385
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||    
T  831340 aggtgacgaccttttggagatttggtaccacatgcatatatgtgtc 831385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 16203921 - 16203966
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||    
T  16203921 aggtgacgaccttttggagatttggtaccacatgcatatatgtgtc 16203966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 21192343 - 21192388
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||| |||||||  |||||||||||||| ||||||||    
T  21192343 aggtgacgaccttaaggtgattcggtaccacatgcatttatgtgtc 21192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 21199770 - 21199814
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgt 213  Q
    ||||||||| |||||||||||  |||||||||||||| |||||||    
T  21199770 aggtgacgagcttgaggtgattcggtaccacatgcatttatgtgt 21199814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 31195881 - 31195917
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcat 205  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  31195881 aggtgacgaccttaaggtgatttggtaccacatgcat 31195917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 210
Target Start/End: Original strand, 71938 - 72145
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtctt 101  Q
    ||||||||||||| |||||||| ||| ||||||||  |  |||  ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  71938 catcatagtcgtgatgagatttgataagatgtttttgttgcatctttgggctccggcctagcagagatcattggtgatctagtttgtggacttcggtctt 72037  T
Q  102 gcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacat 201  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||  ||||||||||    
T  72038 gcagagatccatagtgatctaga-ttgtgggcttcggccttgcagagacctttgacggtctagatataggtgacgaccttgaggtgatccggtaccacat 72136  T
Q  202 gcatatatg 210  Q
    |||| ||||    
T  72137 gcatttatg 72145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 2955 - 3169
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||| ||||||||||||  |  ||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  2955 catcatagtcgtgttgagattt-atatgatgtttttgttgcatcattgggcttcggcctagcagagatcatttagtgatctagttttgtggacttcggtc 3053  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |    |||||||||||||||||||||||||| |||| |||||| ||    
T  3054 ttgcagagatccattagtgatctagatt-gtgggcttcgaccttgcagagacctttagcggtctagatataggtgacgaccttgaagtgaaatggtatca 3152  T
Q  199 catgcatatatgtgtcg 215  Q
    |||||||||||||||||    
T  3153 catgcatatatgtgtcg 3169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 145603 - 145389
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt-cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtct 100  Q
    |||||||||||||||||||||| |||||||||||| || ||| |||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  145603 catcatagtcgtgttgagatttgatatgatgttttgttgcatcattgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtct 145504  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    |||| |||||| ||||||||||||||| ||||||| |||||||||||||||| | || | ||||||||||||||| ||||| || || | ||||||||||    
T  145503 tgcaaagatccattagtgatctagatt-gtgggctccggccttgcagagacctttgacgatctagatataggtgatgacctcgaagtaaaatggtaccac 145405  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  145404 atgcatatatgtgtcg 145389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 6847 - 7057
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || | |||||||||   ||||||||| |||||    
T  6847 catcatagtcgggttgagattttatatgatgttttattcattattgggctacggcctagcagagatcttttgagatctagttattggacttcggccttgc 6946  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    ||||||| || | ||||||| || |||| |||||| |||||||||||| | | |||| | |||||  |||||||||||||||| || |||||||||||||    
T  6947 agagatcttttgagatctag-ttcgtggacttcggtcttgcagagacccttggtggtttggatatgagtgacgaccttgaggttatttggtaccacatgc 7045  T
Q  204 atatatgtgtcg 215  Q
    ||||||||||||    
T  7046 atatatgtgtcg 7057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 2327 - 2491
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||||| ||||||  ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  2327 catcatagtcgggttgagtctttatatgatgttttattcataattgggctccggcctagcagagatcatttgtgatctagtttgtggacttcggtcttgc 2426  T
Q  104 agagatccttagtgatctagatttgtgggcttc-ggccttgcagagaccgtcgatggtctagatat 168  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||| | | |||||| |||||    
T  2427 agagatccttagtgatctagattt-tgggcttcaggccttgcagagacccttggtggtctggatat 2491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 3699 - 3751
Alignment:
Q  163 agatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  3699 agatatgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 3751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 106; Significance: 5e-53; HSPs: 9)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 77059 - 76915
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||| |||||||||||||||    
T  77059 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttgtggacttcggtcttgc 76960  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||    
T  76959 agagatcatttgtgatctagcttt-tgggcttcggccttgcagaga 76915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 10339 - 10122
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||||  |  ||| || ||||| || ||||| |||||||||| ||||||||||||| | |||||||||||    
T  10339 catcatagtcgtgttgagattttatatgatgtttttgttgcatgatcgggctccgacctagtagagatcatttagtgatctagttttgcggacttcggtc 10240  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||||| ||||||| || ||||| ||||||| | ||||||||||||||||||||| ||||| | |||| |||||||||    
T  10239 ttgcagagatccattagtgatctagatt-gtgggctccgtccttgtagagacctttgatggtctagatataggtgacaaccttaaagtgaaatggtacca 10141  T
Q  199 catgcatatatgtgtcggg 217  Q
    ||||||| |||||||||||    
T  10140 catgcatgtatgtgtcggg 10122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 87117 - 87013
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||| |||||||||||||||    
T  87117 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagtttgtggacttcggtcttgc 87018  T
Q  104 agaga 108  Q
    |||||    
T  87017 agaga 87013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 76971 - 76810
Alignment:
Q  52 cttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagacc 151  Q
    |||||| || |||||||||||| ||||||||| ||  || |||||| |||||||||||| || | ||||||| ||||||| |||||  ||||||||||||    
T  76971 cttcggtcttgcagagatcatttgtgatctagcttttgggcttcggccttgcagagatcttttgagatctag-tttgtggacttcgatcttgcagagacc 76873  T
Q  152 gtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
     | | |||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  76872 cttggtggtctggattcaggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc 76810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 138404 - 138450
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  138404 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 138450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 76936 - 76857
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatt 126  Q
    |||||||||||||| ||||||||| || | ||||||||||| |||||||| ||||||||||| |||| ||| ||| ||||    
T  76936 ttgggcttcggccttgcagagatcttttgagatctagtttgtggacttcgatcttgcagagacccttggtggtctggatt 76857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 23767 - 23804
Alignment:
Q  259 tgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23767 tgtgaatgatgattgttgatgatacgtgtgtttgatga 23804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 19503 - 19540
Alignment:
Q  259 tgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||| || ||||||||||    
T  19503 tgtgaatgatgattgttgatgataggtttgtttgatga 19540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 29079 - 29116
Alignment:
Q  259 tgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||| || ||||||||||    
T  29079 tgtgaatgatgattgttgatgataggtttgtttgatga 29116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 4517 - 4300
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctag-tttggggacttcggtc 99  Q
    |||| |||||| |||||||||| ||| ||||||||  |  |||  ||||||| |||| |||||| ||||||| |||||||||| |||| ||||||| |||    
T  4517 catcgtagtcgagttgagatttgataagatgtttttgttgcatctttgggctccggcgtagcagggatcatttagtgatctagatttgtggacttcagtc 4418  T
Q  100 ttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||| ||||||||||||| ||||||||||||||||| |||||||||||||||  | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  4417 ttgtagagatccttagtaatctagatttgtgggctccggccttgcagagacatttgatggtctagatataggtgacgaccttgaagtgaaatggtaccac 4318  T
Q  200 atgcatatatgtgtcggg 217  Q
    ||| ||||||||||||||    
T  4317 atgtatatatgtgtcggg 4300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 84987 - 84861
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  84987 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggaataggctcatatcatattggcatgagtcttatttgttgcatgtgaatgatg 84888  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    | |||||||||||||||||||||||||    
T  84887 actgttgatgataagtgtgtttgatga 84861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 26125 - 25999
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  26125 ggtgacgacctttaggtgatttggtaccacatgcatatatgtgtcgtgattaggcgcatatcatattggcatgagtcttacgtgttgcatgtgaatgatg 26026  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
    ||||||| ||||| |||||||||||||    
T  26025 attgttgttgataggtgtgtttgatga 25999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 30751 - 30536
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt-cattattgggcttcggcctagcagagatcatt-agtgatctagtttgg-ggacttcggtct 100  Q
    |||||||||||||||||||||  ||||||||||||  | ||| |||||||| || |||||||||||||||| ||||||||||||| | ||||||||||||    
T  30751 catcatagtcgtgttgagattg-atatgatgttttggtgcatcattgggctccgacctagcagagatcatttagtgatctagttttgtggacttcggtct 30653  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| |||||||| | || | ||||||||||||||| |||||||| |||| || ||| |||    
T  30652 tgcagagatccattagtgatctagatt-gtgggcttcggcctttcagagacctttgacgttctagatataggtgatgaccttgaagtgaaattgtatcac 30554  T
Q  200 atgcatatatgtgtcggg 217  Q
    ||||||||||||||||||    
T  30553 atgcatatatgtgtcggg 30536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 68895 - 68848
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  68895 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgg 68848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 21236 - 21084
Alignment:
Q  62 gcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtc 161  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| | | |||||    
T  21236 gcagagatccttagtgatctagtttgtggacttcggtcttgcagagatccatagtgatctagatt-gtggggttcggccttgcagagacctttggtggtc 21138  T
Q  162 tagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    | ||||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  21137 tggatatgggtgacgaccttgaggagatttggtaccacatgcatatatgtgtcg 21084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 21334 - 21190
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||  |||||| ||||||||    
T  21334 catcatagtcatgttgagattttatatgatgttttattcattactgggctccggcctagcagagatcattggtggtctagtttatggactttggtcttgc 21235  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||    
T  21234 agagatccttagtgatctag-tttgtggacttcggtcttgcagaga 21190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 28923 - 28780
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||| |||| |||    
T  28923 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcatgggtgatctagtttatggactttggtc-tgc 28825  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||    
T  28824 agagatccttagtgatctag-tttgtggacttcggtcttgcagaga 28780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 28826 - 28674
Alignment:
Q  62 gcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtc 161  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | | |||||    
T  28826 gcagagatccttagtgatctagtttgtggacttcggtcttgcagagatccatagtgatctaga-ttgtgggcttcggccttgcagagacccttggtggtc 28728  T
Q  162 tagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |  ||||  ||||||||||||||| ||| ||| |||||||||||||||||||||    
T  28727 tgcatatgagtgacgaccttgaggagatttggcaccacatgcatatatgtgtcg 28674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 13325 - 13478
Alignment:
Q  62 gcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttc-ggccttgcagagaccgtcgatggt 160  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | | ||||    
T  13325 gcagagatcatttgtgatctagtttgtggacttcgatcttgcagagatccttagtgatctagattt-tgggcttcaggccttgcagagacccttggtggt 13423  T
Q  161 ctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    || ||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  13424 ctggatatgggtgacgaccttgaagtgatttggtaccacatgcatatatgtgtcg 13478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 13227 - 13371
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||| ||||||||||||  || |  |||  ||||    
T  13227 catcatagtagtgttgagagtttatatgatgttttgttcattattgggctccgccctagcagagatcatttgtgatctagtttttgggccccggcgttgc 13326  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || ||||||||| ||||||| |||||  ||||||||||    
T  13327 agagatcatttgtgatctag-tttgtggacttcgatcttgcagaga 13371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 7468 - 7255
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt-cattattgggcttcggcctagcagagatcattag-tgatctagtttggggacttcggtctt 101  Q
    |||||||||| |||||||||||||||||||||||| || ||| |||||||| |||||||||||| ||| || | |||||||||||| ||| |||||||||    
T  7468 catcatagtcatgttgagattttatatgatgttttgttgcatcattgggctccggcctagcagaaatcctttggtgatctagtttgtggatttcggtctt 7369  T
Q  102 gcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccg-tcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    | |||||||| |||||||||||| |||||||||||  ||||||||||||||  | | |||||| || ||||||||||||||||||||||| | |||||||    
T  7368 gtagagatccattagtgatctag-tttgtgggctttagccttgcagagaccccttggtggtctggagataggtgacgaccttgaggtgatttagtaccac 7270  T
Q  200 atgcatatatgtgtc 214  Q
    |||||||||||||||    
T  7269 atgcatatatgtgtc 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 149
Target Start/End: Original strand, 26210 - 26354
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| || | ||||||||||| |||||||||||||||    
T  26210 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccagcctagcatagatcttttgagatctagtttgtggacttcggtcttgc 26309  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || ||||||||| ||| |||||||||||||||||||||    
T  26310 agagatcatttgtgatctag-tttttgggcttcggccttgcagaga 26354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 26298 - 26459
Alignment:
Q  52 cttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagacc 151  Q
    |||||| || |||||||||||| ||||||||||||  || |||||| |||||||||||| || | ||||||| ||||||| |||||| ||||||||||||    
T  26298 cttcggtcttgcagagatcatttgtgatctagtttttgggcttcggccttgcagagatcttttgagatctag-tttgtggacttcggtcttgcagagacc 26396  T
Q  152 gtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
     | | |||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  26397 cttggtggtctggattcaggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc 26459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 26333 - 26412
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatt 126  Q
    |||||||||||||| ||||||||| || | ||||||||||| |||||||||||||||||||| |||| ||| ||| ||||    
T  26333 ttgggcttcggccttgcagagatcttttgagatctagtttgtggacttcggtcttgcagagacccttggtggtctggatt 26412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 881 - 1089
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||| |  |||||| |||||||||||| |||||||||| |||||||||||||||| || | |||||||||| |||| ||||| |||||    
T  881 catcatagtcgtgttggggatttatacgatgttttattcgttattgggctccggcctagcagagatcttttgagatctagttttggga-ttcggccttgc 979  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgc 203  Q
    ||||||| || | |||| || ||||||| |||||| |||||||||||| | | |||||| || || |||||||||||||||| ||| |||||||||||||    
T  980 agagatcttttgagatcaag-tttgtggacttcggtcttgcagagacccttggtggtctggacatgggtgacgaccttgaggagatttggtaccacatgc 1078  T
Q  204 atatatgtgtc 214  Q
    |||||||||||    
T  1079 atatatgtgtc 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 130454 - 130328
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||| |||||    
T  130454 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcgggattaggtgcatatcatattggcatgagtcttatttgttgcatatgattgatg 130355  T
Q  270 attgttgatgataagtgtgtttgatga 296  Q
     |||||||||||||||||| |||||||    
T  130354 gttgttgatgataagtgtggttgatga 130328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 108325 - 108112
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||| ||||||||||||  |  |||  ||||||||||| || |||||||||||| || ||||||||||| || | | |  |     
T  108325 catcatagtcgtgttgagattt-atatgatgtttttgttgcatcgttgggcttcggtcttgcagagatcatttagagatctagtttgtgggccttgaccc 108227  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||||| ||||||| | |||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  108226 tgcagagatccattagtgatctagatt-gtgggctccagccttgcagagacccttgatggtctagatataggtgacgaccttgaagtgaaatggtaccac 108128  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  108127 atgcatatatgtgtcg 108112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 106518 - 106582
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||  |||||||  ||||||||    
T  106518 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtcatgattagggacatatcat 106582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 113891 - 113927
Alignment:
Q  180 ttgaggtgatatggtaccacatgcatatatgtgtcgg 216  Q
    |||| |||| |||||||||||||||||||||||||||    
T  113891 ttgaagtgaaatggtaccacatgcatatatgtgtcgg 113927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 2093 - 1879
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttt-tatt-cattattgggcttcggcctagcagagatca-ttagtgatctag-tttggggacttcggtc 99  Q
    |||||||||||||||||||||||||||||||||| | || ||| |||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||    
T  2093 catcatagtcgtgttgagattttatatgatgtttctgttgcatcattgggctccggcctagcagagatcatttagtgatctagttttgtggacttcggtc 1994  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtacca 198  Q
    |||||||||||| ||||||||||||| |||| ||||||||  || || ||||  |  | |||||||||| | | ||||||||||| |||| |||||||||    
T  1993 ttgcagagatccattagtgatctaga-ttgtaggcttcggaattacaaagacattaaacggtctagataaaagagacgaccttgaagtgaaatggtacca 1895  T
Q  199 catgcatatatgtgtc 214  Q
    ||||||||||||||||    
T  1894 catgcatatatgtgtc 1879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 6556 - 6342
Alignment:
Q  5 atcatagtcgtgttgagattttatatgatgtttt--attcattattgggcttcggcctagcagagatca-ttagtgatctag-tttggggacttcggtct 100  Q
    |||||||| |||||||||||||||||||||||||   | ||| |||||||| ||||||||||||||||| ||||| |||||| |||| ||||||||||||    
T  6556 atcatagttgtgttgagattttatatgatgtttttgttgcatcattgggctccggcctagcagagatcatttagttatctagttttgtggacttcggtct 6457  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    ||||||||||| ||||||||||||| |||| ||||||||  || || ||||  |    |||||||||||| ||||||||||||| |||| ||||||||||    
T  6456 tgcagagatccattagtgatctaga-ttgttggcttcggtttttcatagacttttttcggtctagatatatgtgacgaccttgaagtgaaatggtaccac 6358  T
Q  200 atgcatatatgtgtcg 215  Q
    ||||||||||||||||    
T  6357 atgcatatatgtgtcg 6342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 99689 - 99570
Alignment:
Q  177 accttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttg 276  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| || |||||||| |||||||| |||||||||||||||||    
T  99689 accttgaggtgatttggtaccacatacatatatgtgtcgggaataggcgcatatcatattgacatgagtcttatttgttgcaggtgaatgatgattgttg 99590  T
Q  277 atgataagtgtgtttgatga 296  Q
    ||| ||||||||||||||||    
T  99589 atggtaagtgtgtttgatga 99570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 20373 - 20172
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||| ||||||||||||  |  ||| ||||||||||||||| |||||||||||| |||||||||||||| || ||| |  |     
T  20373 catcatagtcgtgttgagattt-atatgatgtttttgttgcatgattgggcttcggccttgcagagatcatttagtgatctagtttgtgggctttgaccc 20275  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    | || |||||| ||||| ||||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  20274 tacaaagatccattagtaatctagatt-gtgggctttggccttgcagatacctttgatggtctagatataggtgacgaccttgaagtgaaatggtaccac 20176  T
Q  200 atgc 203  Q
    ||||    
T  20175 atgc 20172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 27202 - 27001
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttatt--cattattgggcttcggcctagcagagatcatt-agtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||| ||||||||||||  |  ||| ||||||||||||||| |||||||||||| |||||||||||||| || ||| |  |     
T  27202 catcatagtcgtgttgagattt-atatgatgtttttgttgcatgattgggcttcggccttgcagagatcatttagtgatctagtttgtgggctttgaccc 27104  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccac 199  Q
    | || |||||| ||||| ||||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||| |||| ||||||||||    
T  27103 tacaaagatccattagtaatctagatt-gtgggctttggccttgcagatacctttgatggtctagatataggtgacgaccttgaagtgaaatggtaccac 27005  T
Q  200 atgc 203  Q
    ||||    
T  27004 atgc 27001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 6134 - 6305
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgtttt--attcattattgggcttcggcctagcagagatca-ttagtgatctagtttggggacttcggtct 100  Q
    |||||||||||||||||||||||||| ||||||||   | ||| ||||||||||||||| |||||||||| |||||||||||||||| ||  ||||| ||    
T  6134 catcatagtcgtgttgagattttataagatgtttttgttgcatcattgggcttcggccttgcagagatcatttagtgatctagtttgtgggtttcggcct 6233  T
Q  101 tgcagagatcc-ttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggt 172  Q
    ||||||||||| ||||||||||||| ||||||||||| ||| |||||||||| | | ||||||||||||||||    
T  6234 tgcagagatccattagtgatctaga-ttgtgggcttcagccctgcagagacctttggtggtctagatataggt 6305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 6313 - 6385
Alignment:
Q  225 gcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga-tgataagtgtgtttgatga 296  Q
    ||||||||| ||| || |||||||| | ||   |||||||||||||||||| | |||||||||||||||||||    
T  6313 gcatatcatgttgacatgagtcttattggtgaaatgtgaatgatgattgttcaatgataagtgtgtttgatga 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 2576 - 2704
Alignment:
Q  169 aggtgacgacctt-gaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatga 267  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||| |    || |||||||||||||||||| |||||||| |||||||| ||||||||    
T  2576 aggtgacgacctttgaggtgatttggtaccacacgcatatatgtgttgtctatatgcgcatatcatattggcatgagtcttagttgttgcacgtgaatga 2675  T
Q  268 tgattgttgatgataagtgtgtttgatga 296  Q
    |||||||||||||||||||||||||||||    
T  2676 tgattgttgatgataagtgtgtttgatga 2704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 3325 - 3198
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||  | |||| ||||||||| ||  || |||||||| |||| |||||||||||||    
T  3325 aggtgacgacctagaggtgatttggtaccacatgcatatatgtgtcga-actaggtgcatatcatgttcacatgagtcttatttgtggcatgtgaatgat 3227  T
Q  269 gattgttgatgataagtgtgtttgatgat 297  Q
    |||||||||||||||||||||||||||||    
T  3226 gattgttgatgataagtgtgtttgatgat 3198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 15348 - 15454
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||  || |||||| || ||    
T  15348 catcatagtcgtgttgagattttatatgatgttttattcattattgggctccggcctagcagagatcatttgagatctagttttagggcttcggcctggc 15447  T
Q  104 agagatc 110  Q
    |||||||    
T  15448 agagatc 15454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 191 - 296
Target Start/End: Complemental strand, 4486 - 4380
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcata-ttggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    ||||||||||||||||||||||||| |  ||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4486 tggtaccacatgcatatatgtgtcgtggatagacgcataacataattggcatgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 4387  T
Q  290 ttgatga 296  Q
    |||||||    
T  4386 ttgatga 4380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 2799 - 2884
Alignment:
Q  131 ggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcggg 217  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2799 ggcttcggccttgcagagacctttgatggtctagatataggtgacgaccttgaggtga-atggtaccacatgcatatatgtgtcggg 2884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 6822 - 6856
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgtttt 38  Q
    |||||||||| ||||||||||||||||||||||||    
T  6822 catcatagtcatgttgagattttatatgatgtttt 6856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 21705 - 21819
Alignment:
Q  184 ggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattg-gcacgagtcttaattgt-tgcatgtgaatgatgattgttgatgat 281  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||| |  ||| ||||||||||| | |||||||||||||||||||||||||||    
T  21705 ggtgatctggtaccgcatgcatatatgtgtcgggattaggcgcatagcataataagcatgagtcttaattctctgcatgtgaatgatgattgttgatgat 21804  T
Q  282 aagtgtgtttgatga 296  Q
    |||||||||||||||    
T  21805 aagtgtgtttgatga 21819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 1162 - 1079
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgt 274  Q
    |||||||| || ||| ||||||| || |||||||||||| ||||||| || ||||| ||||||||||||||||||||| |||||    
T  1162 tggtaccatattcatgtatgtgttggaattaggcgcatagcatattgacatgagtcgtaattgttgcatgtgaatgataattgt 1079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 26502 - 26587
Alignment:
Q  131 ggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcggg 217  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26502 ggcttcggccttgcagagacctttgatggtctagatataggtgacgaccttgaggtga-atggtaccacatgcatatatgtgtcggg 26587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 23185 - 23320
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgtttt--attcattattgggcttcggcctagcagagatca-ttagtgatctag-tttggggacttcggtc 99  Q
    |||||||||| ||||||||||||||||||||||||   | ||| ||||||||  |||||||||||||||| |||||| ||||| |||| |||||||||||    
T  23185 catcatagtcatgttgagattttatatgatgtttttgttgcatcattgggctctggcctagcagagatcatttagtggtctagttttgtggacttcggtc 23284  T
Q  100 ttgcagagatcc-ttagtgatctagatttgtgggctt 135  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  23285 ttgcagagatccattagtgatctaga-ttgtgggctt 23320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 94996 - 94852
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| || | |||||||||   || || ||| |||||    
T  94996 catcatagtcgtgtggagattttatatgatgttttattcattattgggctccggcctagcagagatcttttgagatctagttattgggctccggccttgc 94897  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcagaga 149  Q
    ||||||| || | ||||||| ||||||| |||| | ||||||||||    
T  94896 agagatcttttgagatctag-tttgtggacttcagtcttgcagaga 94852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 94916 - 94812
Alignment:
Q  44 ttattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttg 143  Q
    |||||||||| |||||| ||||||||| || | ||||||||||| ||||||| |||||||||||||| || ||||||||| ||| |||||||||||||||    
T  94916 ttattgggctccggccttgcagagatcttttgagatctagtttgtggacttcagtcttgcagagatcatttgtgatctag-tttttgggcttcggccttg 94818  T
Q  144 cagaga 149  Q
    ||||||    
T  94817 cagaga 94812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 94833 - 94767
Alignment:
Q  47 ttgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatcctt 113  Q
    |||||||||||||| ||||||||| || | ||||||||||| |||||||||||||||||||| ||||    
T  94833 ttgggcttcggccttgcagagatcttttgagatctagtttgtggacttcggtcttgcagagaccctt 94767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 94858 - 94770
Alignment:
Q  62 gcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagacc 151  Q
    |||||||||||| ||||||||||||  || |||||| |||||||||||| || | ||||||| ||||||| |||||| ||||||||||||    
T  94858 gcagagatcatttgtgatctagtttttgggcttcggccttgcagagatcttttgagatctag-tttgtggacttcggtcttgcagagacc 94770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 25210 - 25336
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgat 268  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||  | |||| ||||||||| ||| ||  ||||||| |||| |||||||| ||||    
T  25210 aggtgacgaccttgaggtgattttgtaccacatgcatatatgtgtcga-actaggtgcatatcatgttgacatcagtcttatttgtggcatgtgactgat 25308  T
Q  269 gattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||| ||||||||||||    
T  25309 gattgttgatgataaatgtgtttgatga 25336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 17898 - 17828
Alignment:
Q  226 catatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 296  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17898 catatcatattggcatgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttgatga 17828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 44 - 214
Target Start/End: Complemental strand, 18277 - 18108
Alignment:
Q  44 ttattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttgtgggcttcggccttg 143  Q
    |||||| ||| |||||||||||||||| || | ||||||||||  ||  ||||| |||||||| ||| || | |||| || ||||||  |||||| ||||    
T  18277 ttattgtgctccggcctagcagagatcttttgagatctagtttttgggtttcggccttgcagatatcttttgagatcgag-tttgtgaacttcggtcttg 18179  T
Q  144 cagagaccgtcgatggtctagatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||| | | |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  18178 cagagacccttggtggtctggatatgggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc 18108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 18357 - 18215
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgc 103  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| || | |||||||||   |  || ||| || ||    
T  18357 catcatagtcgtgtggagattttatatgatgctttattcattattgggctccggcctagcagagatcttttgagatctagttattgtgctccggcctagc 18258  T
Q  104 agagatccttagtgatctagatttgtgggcttcggccttgcaga 147  Q
    ||||||| || | ||||||| ||| |||| ||||||||||||||    
T  18257 agagatcttttgagatctag-tttttgggtttcggccttgcaga 18215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 8634 - 8699
Alignment:
Q  226 catatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtttg 292  Q
    |||||||||||| || |||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  8634 catatcatattgacatgagtcttatttgt-gcatgtgattgatgattgttgatgataagtgtgtttg 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 45222 - 45327
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtt 290  Q
    |||||| |||||||||||||||||| |  ||||||||||||||||||||| || || |||||| ||||| |||||||||||||||||||||||||||||     
T  45222 tggtactacatgcatatatgtgtcgagtataggcgcatatcatattggcaagaatcctaattgatgcatttgaatgatgattgttgatgataagtgtgtc 45321  T
Q  291 tgatga 296  Q
    ||||||    
T  45322 tgatga 45327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 9932 - 9846
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||||| ||||||||    
T  9932 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattgacatgagtcgtaattgttgcatgtgaatgataattgttga 9846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 19357 - 19271
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||| ||||||||||||||||||||| ||||||||    
T  19357 tggtaccacatgcatgtatgtgtcggaattaggcgcatagcatattgacatgagtcgtaattgttgcatgtgaatgataattgttga 19271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 14215 - 14318
Alignment:
Q  174 acgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattg 273  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| |||||||||||  ||||||| || ||||| |||||| | |||||||||||| ||||    
T  14215 acgaccttgaggtgatttggtaccacatgcatgtatctgtcggaattaggcgcatggcatattgacatgagtcgtaattgattcatgtgaatgataattg 14314  T
Q  274 ttga 277  Q
    ||||    
T  14315 ttga 14318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 7215 - 7100
Alignment:
Q  99 cttgcagagatccttagtgatctagatttgtgggcttcggccttgcagagaccgtcgatggtctagatataggtgacgaccttgag-gtgatatggtacc 197  Q
    |||||| ||||| || |||||||||  |||||||||||||||||||||||||| |   |||||||||||||||||||||||||||  | ||  |||||||    
T  7215 cttgcaaagatcattggtgatctag--ttgtgggcttcggccttgcagagacccttagtggtctagatataggtgacgaccttgaaagagaattggtacc 7118  T
Q  198 acatgcatatatgtgtcg 215  Q
    ||||||||||||||||||    
T  7117 acatgcatatatgtgtcg 7100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 7272 - 7150
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgtttt--attcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtctt 101  Q
    |||||| ||||||||||||||||||||||||||||   | ||| |||||| | | |||| ||| |||||||| ||||||||| ||| || |||||| |||    
T  7272 catcattgtcgtgttgagattttatatgatgtttttgttgcatcattgggttgcagccttgcaaagatcattggtgatctag-ttgtgggcttcggcctt 7174  T
Q  102 gcagagatccttagtgatctagat 125  Q
    ||||||| |||||||| |||||||    
T  7173 gcagagacccttagtggtctagat 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 3844 - 3726
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||| || |||||||  |||  |||| |||||||||    
T  3844 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaggcgcatatcat-ttgacatgagtctt-tttggagcatatgaatgatg 3748  T
Q  270 attgttgatgataagtgtgttt 291  Q
    | ||||| || |||||||||||    
T  3747 aatgttggtgctaagtgtgttt 3726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 6111 - 6230
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagatttg 128  Q
    |||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||  || |||||| || ||||||||| || | ||||||| |||     
T  6111 atgatgatttattcattattgggcttcggcctagcagagatcttttgagatctagttttagggcttcggcctggcagagatcttttgagatctag-tttt 6209  T
Q  129 tgggcttcggccttgcagaga 149  Q
     |||||||||||| |||||||    
T  6210 agggcttcggcctggcagaga 6230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 6303 - 6352
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgt 213  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  6303 gatataggtgacgaccctgagatgatttggtaccacatgcatatatgtgt 6352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 6315 - 6229
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||  || ||||| ||||||||||||||||||||| ||||||||    
T  6315 tggtaccacatgcatgtatgtgtcgaaattaggcgcatagcatatttccatgagtcgtaattgttgcatgtgaatgataattgttga 6229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 256 - 138
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || |||||| |||||||| ||| || |||||||  |||  |||| |||||||||    
T  256 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaggcacatatcat-ttgacatgagtcttttttg-agcatatgaatgatg 160  T
Q  270 attgttgatgataagtgtgttt 291  Q
    | ||||| || |||||||||||    
T  159 aatgttggtgctaagtgtgttt 138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 291
Target Start/End: Complemental strand, 5311 - 5193
Alignment:
Q  170 ggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatg 269  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || |||||| |||||||| ||| || |||||||  |||  |||| |||||||||    
T  5311 ggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc-ggtttaggcacatatcat-ttgacatgagtcttttttg-agcatatgaatgatg 5215  T
Q  270 attgttgatgataagtgtgttt 291  Q
    | ||||| || |||||||||||    
T  5214 aatgttggtgctaagtgtgttt 5193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 1623 - 1694
Alignment:
Q  218 attaggcgcatatcatattgg-cacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    |||||||||||| |||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1623 attaggcgcatagcatatttgacatgagtcgtaattgttgcatgtgaatgatgattgttgatgataagtgtg 1694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 25564 - 25642
Alignment:
Q  199 catgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||| |||||||| | |||||||||||| ||||||| || ||||| ||||||||||||||||||||| ||||||||    
T  25564 catgcatgtatgtgtcagaattaggcgcatagcatattgacatgagtcgtaattgttgcatgtgaatgataattgttga 25642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 277
Target Start/End: Original strand, 2554 - 2640
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttga 277  Q
    ||||||||||||||| |||||||||| |||||| ||||| | ||||  ||  |||| ||||||||||||||||||||| ||||||||    
T  2554 tggtaccacatgcatgtatgtgtcggaattaggtgcatagcttattaacatcagtcgtaattgttgcatgtgaatgataattgttga 2640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 3893 - 3939
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  3893 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtcg 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 64091 - 64188
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgt 289  Q
    ||||||||||||||| || |||||||  ||||||||||||||| ||| || |||||||| |||||| ||||||||| ||||||| | |||||| |||||    
T  64091 tggtaccacatgcatgtaggtgtcggt-ttaggcgcatatcatgttgacatgagtcttacttgttgtatgtgaatggtgattgtgggtgataaatgtgt 64188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 90593 - 90643
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| ||||||||| |||||||| |||||||||||||||    
T  90593 gatatgggtgacgaccctgaggtgatttggtaccaaatgcatatatgtgtc 90643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 90444 - 90523
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||||||||| |||| |||||||||||| ||||||||| || | |||||||||   || |||||| || |||||||||    
T  90444 gatgttttattcgttatagggcttcggcctggcagagatcttttgagatctagttatagggcttcggcctggcagagatc 90523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 13788 - 13833
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13788 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc 13833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 19082 - 19163
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | | ||||||||  || |||||| || |||||||||    
T  19082 atgatgttttattcattattgggctccggcctagcagagatcttttgaggtctagttttagggcttcggcctggcagagatc 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 106237 - 106335
Alignment:
Q  191 tggtaccacatgcatatatgtgtcgggattaggcgcatatcatattggcacgagtcttaattgttgcatgtgaatgatgattgttgatgataagtgtgtt 290  Q
    ||||||||||||||| || ||||| |  ||||||||||||||| ||| || |||||||| |||||| ||||||||| ||||||| | |||||| ||||||    
T  106237 tggtaccacatgcatgtaggtgtctg--ttaggcgcatatcatgttgacatgagtcttacttgttgtatgtgaatggtgattgtgggtgataaatgtgtt 106334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 163903 - 163858
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  163903 aggtgacgaccttgaggtgatttggtaccacatgcatatatgtgtc 163858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 118203 - 118248
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||   ||||||||||||||||||||||    
T  118203 aggtgacgaccttgaggtgattcagtaccacatgcatatatgtgtc 118248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 3525 - 3474
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  3525 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtcg 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 8646 - 8599
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgg 216  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  8646 aggtgacggccttgaggtgatttggtaccacatgcatatatgtgtcgg 8599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 31097 - 31046
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  31097 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtcg 31046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 20899 - 20950
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  20899 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtcg 20950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 20748 - 20789
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  20748 atgatgttttattcattattgggctctggcctagcagagatc 20789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 8000 - 7954
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  8000 aggtgacgaccttgaggtgatttggtaccacatgcatttatgtgtcg 7954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 6114 - 6068
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  6114 aggtgacgaccttgaggtgatttggtaccacatgcatgtatgtgtcg 6068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 31311 - 31261
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  31311 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtc 31261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 28334 - 28284
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  28334 gatatgggtgacgaccctgaggtgatttggtaccacatgcatatatgtgtc 28284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 959 - 902
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagttt 86  Q
    |||||||||||||||||||||||||  ||||||||||||||| || | ||||||||||    
T  959 atgatgttttattcattattgggctctggcctagcagagatcttttgagatctagttt 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 809 - 759
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||||| ||| ||| ||||||||||||||||||||||||    
T  809 gatatgggtgacgacctttaggagatttggtaccacatgcatatatgtgtc 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 3227 - 3182
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  3227 aggtgacgaccttgaggtgatttggtaccacatgcatgtatgtgtc 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 7262 - 7326
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||  |||||||  ||||||||    
T  7262 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtcatgattagggacatatcat 7326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 14243 - 14200
Alignment:
Q  172 tgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  14243 tgacgaccttgaggtgatttggtaccacatgcatttatgtgtcg 14200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 34005 - 33927
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||||||||| |||| ||||||||| || ||||||||| || | ||||||||||  |||||||||||| |||||||||    
T  34005 gatgttttattcgttatagggcttcggtctggcagagatcttttgagatctagttt-tggacttcggtctagcagagatc 33927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 38839 - 38917
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatc 110  Q
    |||||||||||| |||| ||||||||| || ||||||||| || | ||||||||||  |||||||||||| |||||||||    
T  38839 gatgttttattcgttatagggcttcggtctggcagagatcttttgagatctagttt-tggacttcggtctagcagagatc 38917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 1835 - 1801
Alignment:
Q  36 tttattcattattgggcttcggcctagcagagatc 70  Q
    |||||||||||||||||||||||||||||||||||    
T  1835 tttattcattattgggcttcggcctagcagagatc 1801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 78150 - 78096
Alignment:
Q  31 gatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtt 85  Q
    ||||||||||||||||| |||||||||||| ||||||||| || | |||||||||    
T  78150 gatgttttattcattatagggcttcggcctggcagagatcttttgagatctagtt 78096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 4950 - 4995
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  4950 aggtgacgaccttgaggtgattcggtaccacatgcatttatgtgtc 4995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 4697 - 4652
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  4697 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 4652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 14767 - 14808
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  14767 atgatgttttattcgtcattgggcttcggcctagcagagatc 14808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 14999 - 15049
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||||||| |||| |||| | ||||||||||||||||||||||    
T  14999 gatatgggtgacgaccctgagatgattttgtaccacatgcatatatgtgtc 15049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 14862 - 14943
Alignment:
Q  44 ttattgggcttcggcctagcagagatcattagtgatctagtttggggacttcggtcttgcagagatccttagtgatctagat 125  Q
    |||| |||||||||||| ||||||||| || | ||||||||||  || |||||| || ||||||||| || | |||||||||    
T  14862 ttatagggcttcggcctggcagagatcttttgagatctagttttagggcttcggcctggcagagatcttttgagatctagat 14943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 21714 - 21674
Alignment:
Q  248 taattgttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    |||||||| |||||||||| | |||||||||||||||||||    
T  21714 taattgttacatgtgaatgttaattgttgatgataagtgtg 21674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 12766 - 12721
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  12766 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 12721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 60142 - 60097
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||    
T  60142 aggtgacgaccttgaggtgatccggtaccacatgcatttatgtgtc 60097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 249140 - 249181
Alignment:
Q  173 gacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  249140 gacgaccttgaggtgatctggtaccacatgcatttatgtgtc 249181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 236749 - 236704
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||    
T  236749 aggtgacgacctagaggtgataaggtaccacatgcatttatgtgtc 236704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 6652 - 6707
Alignment:
Q  29 atgatgttttattcattattgggcttcggcctagcagagatcattagtgatctagtt 85  Q
    |||||| |||||||||||| |||||||||||||||||||||| || | |||||||||    
T  6652 atgatgatttattcattat-gggcttcggcctagcagagatcttttgagatctagtt 6707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 8248 - 8312
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| |||| |||  |||||||  ||||||||    
T  8248 aggtgacgaccttgaggtgattcggtaccacatgcatttatgcgtcatgattagggacatatcat 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 13637 - 13701
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcgggattaggcgcatatcat 233  Q
    |||||||||||||||||||||  |||||||||||||| |||| |||  |||||||  ||||||||    
T  13637 aggtgacgaccttgaggtgattcggtaccacatgcatttatgcgtcatgattagggacatatcat 13701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 3193 - 3147
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||| ||||||||||| ||||||||||||||| || ||||||    
T  3193 aggtgacgagcttgaggtgatttggtaccacatgcatgtacgtgtcg 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 5801 - 5755
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    ||||||||| ||||||||||| ||||||||||||||| || ||||||    
T  5801 aggtgacgagcttgaggtgatttggtaccacatgcatgtacgtgtcg 5755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 27697 - 27636
Alignment:
Q  4 catcatagtcgtgttgagattttatatgatgttttattcattattgggcttcggcctagcagagatc 70  Q
    ||||||||||||||||||||     | |||||||||||| |||| |||||||||||| |||||||||    
T  27697 catcatagtcgtgttgagat-----acgatgttttattcgttatagggcttcggcctggcagagatc 27636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 27142 - 27096
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||||||||||||||||||  ||||| |||||||| |||||||||    
T  27142 aggtgacgaccttgaggtgatccggtactacatgcatttatgtgtcg 27096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 40105 - 40055
Alignment:
Q  164 gatataggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    ||||| |||||| ||| ||||||||| ||||||||||||||| ||||||||    
T  40105 gatatgggtgacaaccctgaggtgatttggtaccacatgcatttatgtgtc 40055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 38030 - 37984
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtcg 215  Q
    |||||||||||||||||||||  |||||||||||||| || ||||||    
T  38030 aggtgacgaccttgaggtgatccggtaccacatgcatgtacgtgtcg 37984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 145106 - 145061
Alignment:
Q  169 aggtgacgaccttgaggtgatatggtaccacatgcatatatgtgtc 214  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||    
T  145106 aggtgacgaccttttggagatttggtaccacatgcatatatgtgtc 145061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 6566 - 6606
Alignment:
Q  248 taattgttgcatgtgaatgatgattgttgatgataagtgtg 288  Q
    |||||||| |||||||||| | |||||||||||||||||||    
T  6566 taattgttacatgtgaatgttaattgttgatgataagtgtg 6606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University