View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16364_low_9 (Length: 310)

Name: NF16364_low_9
Description: NF16364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16364_low_9
NF16364_low_9
[»] chr8 (61 HSPs)
chr8 (16-300)||(41086776-41087059)
chr8 (16-141)||(25184989-25185115)
chr8 (16-140)||(38773369-38773495)
chr8 (16-143)||(24512188-24512316)
chr8 (17-141)||(37956081-37956205)
chr8 (16-125)||(25198264-25198374)
chr8 (16-131)||(2562751-2562866)
chr8 (16-142)||(37141684-37141811)
chr8 (16-140)||(39543681-39543809)
chr8 (19-143)||(16002747-16002872)
chr8 (17-110)||(26878750-26878843)
chr8 (16-140)||(38770208-38770333)
chr8 (16-140)||(40337212-40337337)
chr8 (16-102)||(3113554-3113640)
chr8 (16-102)||(31746426-31746512)
chr8 (16-110)||(36437492-36437586)
chr8 (16-140)||(38203013-38203138)
chr8 (16-141)||(10396251-10396375)
chr8 (16-102)||(57209-57295)
chr8 (16-141)||(7772471-7772597)
chr8 (32-102)||(14522641-14522711)
chr8 (16-102)||(14577673-14577759)
chr8 (16-102)||(14846942-14847028)
chr8 (155-257)||(24334459-24334561)
chr8 (16-82)||(38761379-38761445)
chr8 (46-141)||(4273959-4274055)
chr8 (16-140)||(24962386-24962510)
chr8 (19-102)||(40790788-40790870)
chr8 (16-102)||(5191570-5191655)
chr8 (16-102)||(34882669-34882755)
chr8 (16-68)||(40517773-40517825)
chr8 (16-102)||(17933703-17933790)
chr8 (16-110)||(24276578-24276670)
chr8 (16-107)||(37600909-37601000)
chr8 (16-102)||(885461-885546)
chr8 (16-102)||(7172218-7172304)
chr8 (16-118)||(16644057-16644159)
chr8 (16-82)||(30262559-30262625)
chr8 (16-74)||(36309617-36309675)
chr8 (16-102)||(43980604-43980690)
chr8 (16-102)||(45185288-45185374)
chr8 (16-77)||(1177177-1177238)
chr8 (16-72)||(12762871-12762927)
chr8 (35-115)||(31252695-31252773)
chr8 (18-118)||(45203742-45203841)
chr8 (19-102)||(22590374-22590457)
chr8 (16-95)||(25888601-25888680)
chr8 (14-131)||(1769466-1769584)
chr8 (16-102)||(12998714-12998800)
chr8 (19-75)||(14906627-14906683)
chr8 (16-76)||(31673621-31673681)
chr8 (16-95)||(43191498-43191577)
chr8 (16-95)||(45183882-45183961)
chr8 (40-95)||(45283827-45283882)
chr8 (20-74)||(44255480-44255534)
chr8 (16-92)||(14739438-14739514)
chr8 (16-67)||(34157951-34158002)
chr8 (16-106)||(3006802-3006892)
chr8 (145-267)||(34653275-34653396)
chr8 (16-66)||(35794777-35794827)
chr8 (16-77)||(40602062-40602123)
[»] chr1 (74 HSPs)
chr1 (16-140)||(5085108-5085233)
chr1 (16-140)||(33231799-33231924)
chr1 (16-138)||(32047403-32047526)
chr1 (16-137)||(48721887-48722010)
chr1 (16-141)||(3143361-3143487)
chr1 (16-140)||(16582492-16582617)
chr1 (16-141)||(29140673-29140799)
chr1 (16-102)||(30898582-30898668)
chr1 (16-140)||(8877731-8877856)
chr1 (16-140)||(34696902-34697027)
chr1 (18-141)||(30336017-30336141)
chr1 (20-102)||(44335287-44335369)
chr1 (16-140)||(9675686-9675811)
chr1 (16-125)||(24414975-24415084)
chr1 (16-102)||(8984680-8984766)
chr1 (16-102)||(38680473-38680559)
chr1 (19-143)||(23982614-23982739)
chr1 (16-101)||(41737124-41737209)
chr1 (19-146)||(5322045-5322173)
chr1 (16-92)||(28723672-28723748)
chr1 (16-143)||(35001289-35001417)
chr1 (16-141)||(44652880-44653003)
chr1 (16-102)||(2342902-2342988)
chr1 (16-118)||(13723497-13723599)
chr1 (16-102)||(15179408-15179494)
chr1 (16-105)||(16395567-16395657)
chr1 (16-102)||(31807991-31808077)
chr1 (17-83)||(46495326-46495392)
chr1 (16-102)||(50692407-50692493)
chr1 (16-113)||(25269364-25269461)
chr1 (47-116)||(28334265-28334334)
chr1 (16-131)||(36084938-36085054)
chr1 (17-117)||(44395518-44395618)
chr1 (16-95)||(47754661-47754740)
chr1 (16-95)||(51996960-51997039)
chr1 (16-102)||(15512800-15512886)
chr1 (17-142)||(27531056-27531182)
chr1 (16-102)||(28948983-28949069)
chr1 (16-102)||(32152156-32152242)
chr1 (16-102)||(44163230-44163316)
chr1 (17-105)||(13352829-13352917)
chr1 (16-102)||(4817925-4818009)
chr1 (16-102)||(4829725-4829809)
chr1 (17-92)||(34102344-34102419)
chr1 (18-77)||(47070982-47071041)
chr1 (16-102)||(47643540-47643624)
chr1 (16-102)||(4813481-4813567)
chr1 (16-102)||(31305316-31305402)
chr1 (16-82)||(35366003-35366069)
chr1 (16-69)||(25063241-25063294)
chr1 (16-102)||(52141194-52141282)
chr1 (146-238)||(12188639-12188731)
chr1 (16-100)||(15911571-15911655)
chr1 (16-92)||(46591110-46591186)
chr1 (16-79)||(13145439-13145502)
chr1 (16-95)||(32144316-32144395)
chr1 (23-82)||(34012075-34012134)
chr1 (17-140)||(3831008-3831130)
chr1 (16-92)||(25258338-25258414)
chr1 (17-94)||(3143756-3143831)
chr1 (59-140)||(10160678-10160760)
chr1 (139-209)||(16632746-16632816)
chr1 (16-102)||(20564773-20564859)
chr1 (145-227)||(46536653-46536735)
chr1 (16-72)||(51390556-51390609)
chr1 (46-126)||(29302498-29302579)
chr1 (27-101)||(43189102-43189178)
chr1 (31-75)||(9684752-9684796)
chr1 (16-72)||(28679841-28679896)
chr1 (144-235)||(8772420-8772511)
chr1 (16-102)||(10842327-10842411)
chr1 (21-75)||(47133463-47133517)
chr1 (23-112)||(6282462-6282551)
chr1 (17-102)||(40261593-40261678)
[»] chr3 (67 HSPs)
chr3 (16-129)||(40645644-40645758)
chr3 (17-140)||(30476000-30476124)
chr3 (16-141)||(29676761-29676887)
chr3 (16-131)||(12077765-12077881)
chr3 (16-128)||(41727260-41727373)
chr3 (17-102)||(46435753-46435838)
chr3 (16-141)||(43187115-43187241)
chr3 (17-102)||(31531448-31531533)
chr3 (16-95)||(13084380-13084459)
chr3 (16-95)||(26043024-26043103)
chr3 (16-102)||(11388119-11388205)
chr3 (16-102)||(26517237-26517323)
chr3 (16-102)||(41825159-41825245)
chr3 (16-102)||(46048520-46048606)
chr3 (16-95)||(26121337-26121416)
chr3 (16-82)||(28477403-28477469)
chr3 (16-102)||(50363025-50363111)
chr3 (16-108)||(41308798-41308890)
chr3 (16-142)||(50092625-50092752)
chr3 (16-102)||(14645911-14645997)
chr3 (16-102)||(27047200-27047286)
chr3 (16-102)||(29645356-29645442)
chr3 (16-102)||(31819404-31819490)
chr3 (16-82)||(39617272-39617338)
chr3 (16-102)||(51263080-51263166)
chr3 (16-89)||(29611845-29611918)
chr3 (17-102)||(42891417-42891502)
chr3 (17-92)||(33411996-33412071)
chr3 (16-102)||(20945322-20945408)
chr3 (16-141)||(27638099-27638225)
chr3 (16-102)||(37729051-37729137)
chr3 (16-141)||(50524998-50525124)
chr3 (16-102)||(54425978-54426064)
chr3 (17-102)||(52325526-52325611)
chr3 (46-95)||(53717578-53717627)
chr3 (46-102)||(23157093-23157149)
chr3 (31-111)||(34055899-34055979)
chr3 (16-92)||(44083635-44083711)
chr3 (34-140)||(11344517-11344624)
chr3 (16-95)||(22659585-22659664)
chr3 (56-141)||(5504604-5504690)
chr3 (20-102)||(26998893-26998975)
chr3 (19-105)||(48901542-48901628)
chr3 (19-105)||(48903108-48903194)
chr3 (17-102)||(42010866-42010951)
chr3 (16-92)||(11140713-11140789)
chr3 (16-72)||(41739995-41740051)
chr3 (16-95)||(831382-831461)
chr3 (16-71)||(21932955-21933010)
chr3 (16-95)||(25750532-25750611)
chr3 (33-100)||(35765685-35765752)
chr3 (16-82)||(26243490-26243556)
chr3 (16-70)||(35055816-35055870)
chr3 (16-102)||(41543629-41543715)
chr3 (140-190)||(50958645-50958695)
chr3 (17-118)||(31650688-31650789)
chr3 (16-102)||(33287864-33287950)
chr3 (17-82)||(11393940-11394005)
chr3 (17-102)||(21864297-21864380)
chr3 (16-105)||(48309440-48309528)
chr3 (185-257)||(11529306-11529378)
chr3 (57-117)||(35145223-35145283)
chr3 (47-105)||(23068029-23068086)
chr3 (16-102)||(44338080-44338165)
chr3 (16-69)||(31474455-31474508)
chr3 (217-262)||(49452600-49452645)
chr3 (185-230)||(54730744-54730789)
[»] chr5 (56 HSPs)
chr5 (16-143)||(25017693-25017821)
chr5 (16-141)||(34877625-34877751)
chr5 (20-142)||(21574903-21575026)
chr5 (16-140)||(27798116-27798241)
chr5 (16-141)||(3247293-3247419)
chr5 (16-140)||(4738590-4738715)
chr5 (16-95)||(15898482-15898561)
chr5 (16-142)||(36177250-36177377)
chr5 (16-141)||(10933965-10934091)
chr5 (16-142)||(27587796-27587923)
chr5 (16-102)||(3559046-3559132)
chr5 (16-82)||(12895228-12895294)
chr5 (16-113)||(5845164-5845261)
chr5 (16-92)||(10523293-10523369)
chr5 (16-131)||(3631139-3631253)
chr5 (16-92)||(31642488-31642563)
chr5 (16-118)||(20946070-20946172)
chr5 (16-102)||(29866188-29866274)
chr5 (16-102)||(39690505-39690591)
chr5 (16-82)||(43060529-43060595)
chr5 (34-102)||(15967149-15967217)
chr5 (16-140)||(25690706-25690833)
chr5 (16-136)||(27642467-27642587)
chr5 (145-248)||(10418601-10418704)
chr5 (144-240)||(35980696-35980793)
chr5 (16-95)||(36347620-36347699)
chr5 (16-102)||(21912119-21912205)
chr5 (197-267)||(33085332-33085402)
chr5 (16-102)||(35569024-35569110)
chr5 (202-263)||(12487096-12487157)
chr5 (19-95)||(600771-600847)
chr5 (23-95)||(32067834-32067906)
chr5 (16-75)||(19281510-19281569)
chr5 (16-77)||(4745151-4745212)
chr5 (16-73)||(4857513-4857570)
chr5 (31-92)||(33862849-33862910)
chr5 (16-92)||(41521197-41521273)
chr5 (32-79)||(129632-129679)
chr5 (144-279)||(26401983-26402118)
chr5 (16-126)||(40979231-40979342)
chr5 (16-95)||(43453988-43454067)
chr5 (16-70)||(30348096-30348150)
chr5 (37-102)||(7510605-7510670)
chr5 (17-58)||(9375659-9375700)
chr5 (41-102)||(18729587-18729648)
chr5 (16-75)||(731971-732031)
chr5 (19-102)||(10656591-10656672)
chr5 (197-281)||(35626643-35626727)
chr5 (26-77)||(29874202-29874253)
chr5 (40-82)||(11980735-11980777)
chr5 (84-141)||(27925336-27925394)
chr5 (32-82)||(32402092-32402142)
chr5 (201-259)||(40132440-40132498)
chr5 (145-262)||(1637969-1638086)
chr5 (16-108)||(16969367-16969459)
chr5 (17-77)||(42644498-42644558)
[»] chr2 (73 HSPs)
chr2 (16-140)||(8065092-8065217)
chr2 (16-140)||(9718192-9718317)
chr2 (16-144)||(41665667-41665795)
chr2 (16-140)||(44424555-44424680)
chr2 (16-140)||(28733785-28733908)
chr2 (16-141)||(44421408-44421534)
chr2 (16-143)||(27297534-27297662)
chr2 (19-141)||(35178816-35178939)
chr2 (17-102)||(28264972-28265057)
chr2 (46-141)||(13534374-13534469)
chr2 (16-102)||(45214724-45214810)
chr2 (16-140)||(15851491-15851616)
chr2 (16-140)||(17250981-17251106)
chr2 (16-95)||(14420683-14420762)
chr2 (18-117)||(35241730-35241829)
chr2 (16-107)||(37355030-37355121)
chr2 (16-95)||(43650040-43650119)
chr2 (16-102)||(20361982-20362068)
chr2 (16-102)||(24774864-24774950)
chr2 (16-102)||(44274687-44274773)
chr2 (16-131)||(31644462-31644578)
chr2 (17-92)||(4398545-4398620)
chr2 (19-102)||(11459152-11459235)
chr2 (16-142)||(3237679-3237808)
chr2 (16-102)||(17663623-17663709)
chr2 (33-143)||(27749470-27749580)
chr2 (16-141)||(41865675-41865800)
chr2 (16-113)||(34329990-34330087)
chr2 (16-137)||(3326687-3326809)
chr2 (16-102)||(26512070-26512156)
chr2 (139-260)||(4818729-4818848)
chr2 (202-259)||(14818859-14818916)
chr2 (16-76)||(375365-375425)
chr2 (16-112)||(1246433-1246529)
chr2 (19-95)||(2131763-2131839)
chr2 (144-235)||(2396707-2396798)
chr2 (16-95)||(4033587-4033666)
chr2 (16-75)||(38449734-38449793)
chr2 (16-71)||(38982091-38982146)
chr2 (16-118)||(43709901-43710004)
chr2 (16-102)||(7278633-7278719)
chr2 (25-95)||(8384001-8384071)
chr2 (17-83)||(14527641-14527707)
chr2 (17-82)||(247679-247744)
chr2 (16-81)||(7255621-7255686)
chr2 (18-95)||(21012859-21012936)
chr2 (19-83)||(6275591-6275654)
chr2 (144-239)||(16209833-16209928)
chr2 (16-103)||(45150756-45150843)
chr2 (185-259)||(29660435-29660509)
chr2 (16-102)||(40346101-40346187)
chr2 (16-77)||(2521320-2521381)
chr2 (21-102)||(3645322-3645403)
chr2 (16-93)||(11071676-11071753)
chr2 (17-73)||(25731207-25731263)
chr2 (16-100)||(2917121-2917201)
chr2 (36-75)||(6597882-6597921)
chr2 (16-75)||(8393234-8393293)
chr2 (16-102)||(8667637-8667724)
chr2 (19-82)||(28190617-28190680)
chr2 (17-76)||(29971296-29971354)
chr2 (16-75)||(36846781-36846840)
chr2 (16-75)||(44462601-44462660)
chr2 (16-102)||(2048850-2048934)
chr2 (16-73)||(4758054-4758111)
chr2 (196-281)||(8793863-8793948)
chr2 (47-92)||(20426950-20426995)
chr2 (197-278)||(30554591-30554672)
chr2 (17-77)||(16808844-16808904)
chr2 (17-77)||(16848125-16848185)
chr2 (19-79)||(23464705-23464765)
chr2 (20-100)||(32677476-32677556)
chr2 (17-77)||(35453754-35453814)
[»] chr7 (51 HSPs)
chr7 (16-130)||(37673707-37673822)
chr7 (19-141)||(4089523-4089646)
chr7 (23-140)||(48767524-48767642)
chr7 (16-140)||(1324668-1324793)
chr7 (16-141)||(36116280-36116406)
chr7 (16-142)||(49100629-49100756)
chr7 (16-102)||(20123449-20123535)
chr7 (23-143)||(36726200-36726321)
chr7 (16-102)||(6376153-6376239)
chr7 (16-102)||(21388241-21388327)
chr7 (16-102)||(25750367-25750453)
chr7 (16-129)||(48610156-48610270)
chr7 (16-102)||(2276597-2276683)
chr7 (16-102)||(37048034-37048120)
chr7 (16-118)||(40211297-40211399)
chr7 (16-131)||(35128355-35128469)
chr7 (16-92)||(43465163-43465239)
chr7 (16-95)||(10685091-10685170)
chr7 (16-102)||(21801076-21801162)
chr7 (16-102)||(21809667-21809753)
chr7 (16-102)||(31373718-31373804)
chr7 (16-102)||(10595119-10595203)
chr7 (16-95)||(33181301-33181380)
chr7 (23-102)||(48193614-48193693)
chr7 (16-102)||(26632845-26632931)
chr7 (16-102)||(40263710-40263796)
chr7 (16-113)||(18122062-18122159)
chr7 (16-92)||(5334415-5334491)
chr7 (28-92)||(29636072-29636136)
chr7 (16-102)||(19236087-19236173)
chr7 (16-102)||(46783861-46783947)
chr7 (17-102)||(27213486-27213571)
chr7 (19-102)||(37491642-37491725)
chr7 (19-102)||(40740949-40741032)
chr7 (16-82)||(21392913-21392979)
chr7 (16-102)||(23876036-23876122)
chr7 (144-257)||(45411266-45411379)
chr7 (22-140)||(29723421-29723540)
chr7 (21-95)||(29992981-29993055)
chr7 (16-141)||(35960337-35960463)
chr7 (34-142)||(20124146-20124255)
chr7 (16-100)||(21752529-21752613)
chr7 (136-282)||(21946149-21946288)
chr7 (16-76)||(42983634-42983694)
chr7 (202-281)||(23705055-23705134)
chr7 (16-102)||(27162924-27163008)
chr7 (17-72)||(28663784-28663839)
chr7 (20-91)||(41672591-41672662)
chr7 (200-238)||(39026862-39026900)
chr7 (147-229)||(40024204-40024286)
chr7 (16-105)||(43601185-43601273)
[»] chr4 (63 HSPs)
chr4 (23-140)||(16070391-16070509)
chr4 (16-140)||(20262414-20262539)
chr4 (16-140)||(25477185-25477310)
chr4 (16-140)||(5448622-5448747)
chr4 (16-118)||(29584877-29584979)
chr4 (16-117)||(5536481-5536582)
chr4 (16-140)||(39237609-39237738)
chr4 (16-131)||(50782747-50782863)
chr4 (16-141)||(46729265-46729390)
chr4 (16-140)||(22750862-22750987)
chr4 (16-140)||(51787731-51787856)
chr4 (16-102)||(30153242-30153328)
chr4 (16-102)||(37175042-37175127)
chr4 (16-102)||(38136354-38136440)
chr4 (16-140)||(52225979-52226104)
chr4 (16-140)||(43800758-43800893)
chr4 (15-102)||(41920057-41920144)
chr4 (16-102)||(14602675-14602761)
chr4 (16-102)||(34543701-34543787)
chr4 (16-102)||(43509082-43509166)
chr4 (16-102)||(52198748-52198834)
chr4 (16-129)||(54438481-54438595)
chr4 (16-102)||(56373364-56373450)
chr4 (16-92)||(5932895-5932971)
chr4 (16-92)||(13096562-13096638)
chr4 (16-95)||(39197054-39197134)
chr4 (16-130)||(48472515-48472631)
chr4 (19-102)||(20185679-20185762)
chr4 (16-130)||(32236801-32236916)
chr4 (16-102)||(12624695-12624781)
chr4 (16-102)||(22651463-22651549)
chr4 (16-117)||(24072751-24072852)
chr4 (17-82)||(31937413-31937478)
chr4 (20-140)||(52552535-52552656)
chr4 (16-95)||(31840104-31840181)
chr4 (20-95)||(3094188-3094263)
chr4 (19-102)||(41945796-41945878)
chr4 (16-102)||(19654427-19654513)
chr4 (16-102)||(28116525-28116611)
chr4 (16-102)||(37625145-37625231)
chr4 (144-281)||(16502387-16502523)
chr4 (16-76)||(5168004-5168064)
chr4 (21-77)||(10602231-10602287)
chr4 (18-102)||(31486487-31486571)
chr4 (16-92)||(33246517-33246593)
chr4 (16-102)||(5416889-5416973)
chr4 (16-102)||(20291339-20291425)
chr4 (17-102)||(3684209-3684294)
chr4 (16-116)||(20116437-20116535)
chr4 (144-225)||(51088909-51088990)
chr4 (16-72)||(39414265-39414321)
chr4 (33-92)||(45628111-45628170)
chr4 (196-261)||(2392579-2392644)
chr4 (46-95)||(54359690-54359739)
chr4 (16-92)||(7002192-7002268)
chr4 (175-231)||(35142591-35142646)
chr4 (16-102)||(54701310-54701393)
chr4 (69-112)||(3113363-3113406)
chr4 (17-92)||(26203139-26203214)
chr4 (16-58)||(26186775-26186817)
chr4 (19-72)||(32107874-32107927)
chr4 (19-72)||(51918675-51918728)
chr4 (19-95)||(20791933-20792009)
[»] chr6 (35 HSPs)
chr6 (139-271)||(23131426-23131558)
chr6 (16-95)||(1763819-1763898)
chr6 (16-140)||(5895691-5895816)
chr6 (16-92)||(12514606-12514682)
chr6 (19-102)||(16327122-16327205)
chr6 (16-102)||(15981793-15981879)
chr6 (16-102)||(22410864-22410950)
chr6 (16-102)||(31945933-31946019)
chr6 (16-95)||(3729395-3729474)
chr6 (19-82)||(16350540-16350603)
chr6 (31-95)||(4250694-4250758)
chr6 (16-111)||(11302845-11302940)
chr6 (16-95)||(30465989-30466068)
chr6 (16-106)||(197472-197562)
chr6 (16-102)||(19838930-19839016)
chr6 (19-105)||(30248560-30248645)
chr6 (16-112)||(9461282-9461378)
chr6 (16-102)||(5084558-5084648)
chr6 (202-278)||(2839059-2839135)
chr6 (16-92)||(34513239-34513315)
chr6 (16-102)||(6791377-6791461)
chr6 (185-235)||(5305133-5305183)
chr6 (17-138)||(16186535-16186656)
chr6 (17-102)||(28238336-28238421)
chr6 (19-83)||(10669298-10669362)
chr6 (185-254)||(2223702-2223771)
chr6 (17-73)||(9428195-9428251)
chr6 (16-72)||(33607384-33607440)
chr6 (23-102)||(3887971-3888049)
chr6 (16-95)||(20522978-20523057)
chr6 (16-95)||(31536018-31536097)
chr6 (59-112)||(3307973-3308026)
chr6 (16-72)||(12514776-12514832)
chr6 (203-259)||(18592692-18592748)
chr6 (16-72)||(31780153-31780209)
[»] scaffold1091 (1 HSPs)
scaffold1091 (16-102)||(1933-2019)
[»] scaffold0005 (1 HSPs)
scaffold0005 (16-102)||(214617-214703)
[»] scaffold0182 (2 HSPs)
scaffold0182 (17-140)||(22025-22144)
scaffold0182 (16-97)||(18693-18774)
[»] scaffold0038 (1 HSPs)
scaffold0038 (17-102)||(38498-38583)
[»] scaffold0012 (1 HSPs)
scaffold0012 (16-92)||(99837-99913)
[»] scaffold0013 (1 HSPs)
scaffold0013 (17-95)||(49142-49220)
[»] scaffold0176 (1 HSPs)
scaffold0176 (19-140)||(19492-19612)


Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 300
Target Start/End: Complemental strand, 41087059 - 41086776
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  41087059 cacatacaaacaaaggaaaatttgataatattaacacacaaatcagacacattaattacactgacaatatttcttaagaaatgtgaa-aaggcaatgggt 41086961  T
Q  116 gctacattaagggacgcagggagtatttgttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaattt 215  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  41086960 gctacattaagggacgtaaggagtatttgttaaagtaccaaaataagtaattttttaataaaatgttgtgtaattattaccaagataaaagtaaaaattt 41086861  T
Q  216 gtattttcaaaacaaagtttctacaaatagattctttaaccaatgccattagaacactagttagcactcaaaacctactcctttg 300  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  41086860 gtatttccaagacaaagtttctacaaatagattctttaaccaatgtcattagaacactagttagcgctcaaaacctactcctttg 41086776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 25185115 - 25184989
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||| |||||| ||||||||||||    
T  25185115 cacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacacattagttacactgacaacttttcttaagaaatgtgaaaaaggcaatgggt 25185016  T
Q  116 gc-tacattaagggacgcagggagtat 141  Q
    || |||||||||||||| | |||||||    
T  25185015 gcatacattaagggacgaatggagtat 25184989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 38773369 - 38773495
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa-tatttcttaagaattgtgaagaaggcaatggg 114  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| |||||| ||| ||||||     
T  38773369 cacatacaaacaaaagacaatttcgtaatgttaacacacaaaacagacacattaattgcactgacaacttttttttaagaaatgtgaaaaagacaatggt 38773468  T
Q  115 tg-ctacattaagggacgcagggagta 140  Q
    || ||||||||||||||| ||||||||    
T  38773469 tgcctacattaagggacggagggagta 38773495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 24512188 - 24512316
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||| || |||||| |||  ||||| |    
T  24512188 cacatacaaacaaaagacaatttgataatattaacacacaaaacagacacattaattacactgacaaattttcttaaaaaatgtgaaaaagataatggat 24512287  T
Q  116 g-ctacattaagggacgcagggagtattt 143  Q
    | ||||||||||||||| ||| |||||||    
T  24512288 gcctacattaagggacggaggaagtattt 24512316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 37956205 - 37956081
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    ||||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||| ||||||       
T  37956205 acatacaaacaaaggacaaattcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatggtac 37956106  T
Q  117 ctacattaagggacgcagggagtat 141  Q
    ||||||||||||||| |||||||||    
T  37956105 ctacattaagggacggagggagtat 37956081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 25198374 - 25198264
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||| |||||||||| |    
T  25198374 cacatacaaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaatggat 25198275  T
Q  116 g-ctacattaa 125  Q
    | |||||||||    
T  25198274 gcctacattaa 25198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 2562751 - 2562866
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||| || |||| |||     
T  2562751 cacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacagtttttcttaagaaatgtgaaaaaagcaaaggga 2562850  T
Q  116 gctacattaagggacg 131  Q
    | ||||||||||||||    
T  2562851 gttacattaagggacg 2562866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 37141811 - 37141684
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||  ||| |||| || |||||| || ||||| |||    
T  37141811 cacatacaaacaaatgacaatttcgtaatattaacacacaaaacagatacattaattacactgacaactttttttaaaaaatgtgaaaaatgcaataggt 37141712  T
Q  116 gc-tacattaagggacgcagggagtatt 142  Q
    || ||||||||| |||| ||||||||||    
T  37141711 gcttacattaagagacggagggagtatt 37141684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 39543681 - 39543809
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatg---ttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatg 112  Q
    |||||||||||||||||||||||||||||    ||||| ||||||||||||||||||||||||| ||||| |||||||||||| | |||| ||||||||     
T  39543681 cacatacaaacaaaagacaatttggtaataatattaacgcacaaaacagacacattaattacacggacaacatttcttaagaaatatgaaaaaggcaata 39543780  T
Q  113 ggtg-ctacattaagggacgcagggagta 140  Q
    |||| ||||||||| ||||| | ||||||    
T  39543781 ggtgcctacattaaaggacggatggagta 39543809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 16002747 - 16002872
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-c 117  Q
    ||||||||||| || |||||  |||| |||||||||||||| |||||||||||||||| |||||  |||||||| || |||||| |||| |||||||| |    
T  16002747 atacaaacaaaggataatttcttaatattaacacacaaaactgacacattaattacacagacaacttttcttaaaaaatgtgaaaaaggaaatgggtgtc 16002846  T
Q  118 tacattaagggacgcagggagtattt 143  Q
    |||||||||||||| | |||||||||    
T  16002847 tacattaagggacggatggagtattt 16002872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 26878750 - 26878843
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaa 110  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| | ||||  ||||||||||| |||||| |||||||    
T  26878750 acatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacattaacaacttttcttaagaaatgtgaaaaaggcaa 26878843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 38770208 - 38770333
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| | |||||||||||||||||||||  | ||||||||| | |||| ||| ||||| ||    
T  38770208 cacatacaaacaaatgacaatttcgtaatattaacacacaaaataaacacattaattacactgacaacttatcttaagaaatatgaaaaagacaatgcgt 38770307  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||| ||| ||||||||    
T  38770308 gcctacattaaggaacggagggagta 38770333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 40337212 - 40337337
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||| |||||||| |||||||||||| ||||| ||  |||| |||||| |||||| ||| |||||| |    
T  40337212 cacatacaaacaaaggacaattttgtaatattaacatacaaaacatacacattaattatactgataacttttcataagaaatgtgaaaaagacaatggat 40337311  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| ||||||||    
T  40337312 gcctacattaagggacggagggagta 40337337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 3113554 - 3113640
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||| ||| ||||||| ||||||    
T  3113554 cacatataaacaaaagacaatttgataatattaacacacaaaacagacatattaattacactgataattttttttaagaaatgtgaa 3113640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 31746426 - 31746512
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||| |||| ||||| ||||||||||| ||||||    
T  31746426 cacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaagaaatgtgaa 31746512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 36437586 - 36437492
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaa 110  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| ||| | |||||||| || |||| | |||||||    
T  36437586 cacatacaaacaaaggacaatttggtaatgttaacacacaaaatagacacattaattgcactaacattttttcttaaaaaatgtggaaaaggcaa 36437492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 38203013 - 38203138
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||| ||| ||||||||||| |||||  ||| ||||||| |||||| |||  || ||||    
T  38203013 cacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacatattaattacaccgacaacttttattaagaaatgtgaaaaagataacgggt 38203112  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||| ||||| ||||||||    
T  38203113 gcctacattaaaggacggagggagta 38203138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 10396251 - 10396375
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||  | |||||||||||| ||||||  |||||||| || |||||| || | |||||||    
T  10396251 cacatacaaacaaatgacaatttcgtaatattaacacacaaaac--aaacattaattacattgacaacttttcttaataaatgtgaaaaatgaaatgggt 10396348  T
Q  116 gc-tacattaagggacgcagggagtat 141  Q
    || |||| ||||||||| |||||||||    
T  10396349 gcatacaataagggacggagggagtat 10396375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 57209 - 57295
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| |||  ||||||| ||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  57209 cacatacaaataaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaa 57295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 7772597 - 7772471
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  |||||||| || ||| || ||| |||| | |    
T  7772597 cacatacaaataaaggacaatttcgtaatattaacacacaaaacagacacattaattacaatgacaacttttcttaaaaaatgtaaaaaagacaatagat 7772498  T
Q  116 -gctacattaagggacgcagggagtat 141  Q
     ||||| |||||||||| | |||||||    
T  7772497 ggctacgttaagggacgaatggagtat 7772471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 14522641 - 14522711
Alignment:
Q  32 acaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||||    
T  14522641 acaatttggtaatattaacacacaaaacatacacattaattacactaacaatttttcttaagaaatgtgaa 14522711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 14577673 - 14577759
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||  ||||||||||||| |||||| |||||| |||||||||||||||||| ||||  ||||||||||| ||||||    
T  14577673 cacatacaaacaaagtacaatttggtaatattaacaaacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaa 14577759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 14846942 - 14847028
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||| |||||  |||||||| || ||||||    
T  14846942 cacatacaaacaaaagacaatatggtaatattaacgcacaaagcagacacattaattacaccgacaacttttcttaaaaaatgtgaa 14847028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 24334459 - 24334561
Alignment:
Q  155 aaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaa 254  Q
    |||||||| ||||||| ||||||| |||| |||||||||| ||||| ||||||||||| ||||||||| |||||||| ||||||| |||  |||| ||||    
T  24334459 aaaataagcaattttgcaataaaaagttgtgtaattattaccaagagaaaagtaaaaacttgtatttttaaaacaaaatttctactaatgaattccttaa 24334558  T
Q  255 cca 257  Q
    |||    
T  24334559 cca 24334561  T

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Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 38761379 - 38761445
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  38761379 cacatacaaacaaatgacaatttcataatattaacacacaaaacagacacattaattacactgacaa 38761445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 4273959 - 4274055
Alignment:
Q  46 ttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctacattaagggacgcagggagtat 141  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||||||| |||||| ||| ||||  ||| ||||||||| ||||| |||||||||    
T  4273959 ttaacacataaaacaaacacattaattacactaacaatatttcttaagaaatgtgaaaaagacaatacgtgtctacattaatggacgaagggagtat 4274055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 24962386 - 24962510
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||| |||||| ||||  ||||||||||| |||||| || |||| |||     
T  24962386 cacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggga 24962485  T
Q  116 gctacattaagggacgcagggagta 140  Q
      |||||  ||||||| ||||||||    
T  24962486 attacatatagggacggagggagta 24962510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 40790870 - 40790788
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||| |||||||||||||| |||| ||||||| ||||| ||||||||||||||||||  ||||||||||| ||||||    
T  40790870 atacaaacaaatgacaatttggtaatattaatacacaaa-cagacgcattaattacactgacaacttttcttaagaaatgtgaa 40790788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 5191570 - 5191655
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||| ||||||  |||||||||||||| ||||||||||||||||||||||||||| | || ||||| ||||||||||| ||||||    
T  5191570 cacatataaacaatggacaatttggtaatattaacacacaaaacagacacattaattgc-ctaacaatttttcttaagaaatgtgaa 5191655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 34882755 - 34882669
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||| || | ||||| |||||||| || ||||||    
T  34882755 cacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattgcattaacaatttttcttaaaaaatgtgaa 34882669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 40517825 - 40517773
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacatt 68  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  40517825 cacatacaaacaaaggacaatttggtaatattaacacacaaaacagacacatt 40517773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 17933790 - 17933703
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgtt-aacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||| ||||||||| || ||||||||||| ||||||||||||||||  |||||| ||||||| ||| ||||||    
T  17933790 cacatacaaacaaatgacagtttggtaatatttaacacacaaaatagacacattaattacatcgacaatttttcttacgaaatgtgaa 17933703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 24276578 - 24276670
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaa 110  Q
    |||||||||||||| |||||||||||||| |||||||||  || |||||||||||||| ||| ||||  ||| ||||||| |||||| |||||||    
T  24276578 cacatacaaacaaatgacaatttggtaatattaacacac--aatagacacattaattatactaacaactttttttaagaaatgtgaaaaaggcaa 24276670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 37600909 - 37601000
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaagg 107  Q
    ||||||||||||||||| ||||||| | | |||||||| ||| ||||||||||||||| ||| |||| ||||||||| || |||||| ||||    
T  37600909 cacatacaaacaaaagataatttggcagtattaacacataaatcagacacattaattatacttacaacatttcttaaaaaatgtgaaaaagg 37601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 885546 - 885461
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||||||| | |||||||||||||||  |||||||| || ||||||    
T  885546 cacatacaaacaaaggacaatttgataatattaacacac-aaacagacataataattacactgacaacttttcttaataaatgtgaa 885461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 7172304 - 7172218
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||  |||| ||||||||||||| |||||||||||||||||  | ||  ||||||||||| ||||||    
T  7172304 cacatacaaacaaatgacaattttataatattaacacacaaaatagacacattaattacaccaaaaagttttcttaagaaatgtgaa 7172218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 16644057 - 16644159
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||| |||||  ||||||| || || ||||||||||||| | |||||||||||||||| ||||  ||||||||||| |||||| || |||||| ||    
T  16644057 cacatacagacaaagaacaatttagtgatattaacacacaaaatatacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaatgagt 16644156  T
Q  116 gct 118  Q
    |||    
T  16644157 gct 16644159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 30262559 - 30262625
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    |||||||||||||| |||||||||||||| |||||| |||||| ||||||||||||| |||| ||||    
T  30262559 cacatacaaacaaatgacaatttggtaatattaacatacaaaatagacacattaattgcactaacaa 30262625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 36309617 - 36309675
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattac 74  Q
    |||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||    
T  36309617 cacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattac 36309675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 43980604 - 43980690
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || ||||| ||||| |||||||| |||| ||||||||||| |||||| ||||  ||||||||||| ||||||    
T  43980604 cacatacaaacaaatgataatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 43980690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 45185288 - 45185374
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||| |||| |||| ||| |||||||||||||| ||||||  |||||  ||||||||||| ||||||    
T  45185288 cacatacaaacaaaggacaatttgataatattaatacataaaacagacacatttattacaacgacaacttttcttaagaaatgtgaa 45185374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 1177177 - 1177238
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||||||||||    
T  1177177 cacatacaaataaaagacaatttcgtaatattaatatacaaaacagacacattaattacact 1177238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 12762927 - 12762871
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||    
T  12762927 cacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaatt 12762871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 31252695 - 31252773
Alignment:
Q  35 atttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||| |||| |||||||    
T  31252695 atttcgtaatattaacacacaaaacagacacattaattacactgataat-ttttttaagaaatgtgaa-aagggaatgggt 31252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 45203841 - 45203742
Alignment:
Q  18 catacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtgc 117  Q
    |||||||||||| ||||| |||||||| |||||| |||||| ||||||||||||| |||| | || |||||||||||| ||| || || |||| ||||||    
T  45203841 catacaaacaaaggacaagttggtaatattaacatacaaaatagacacattaattgcact-aaaaaatttcttaagaaatgtaaaaaatgcaaagggtgc 45203743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 22590457 - 22590374
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||  ||||||||||| || |||||||| |||| ||||||||||||| |||| ||||  ||||||||||| ||||||    
T  22590457 atacaaacaatggacaatttggtgatattaacacaaaaaatagacacattaattgcactaacaaattttcttaagaaatgtgaa 22590374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 25888680 - 25888601
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||| || |||| |||||| |||||| ||||| |||||||||||| ||||  |||||||||||    
T  25888680 cacatacaaacaaatgacaatatgataatattaacatacaaaatagacatattaattacactaacaacttttcttaagaa 25888601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 1769466 - 1769584
Alignment:
Q  14 atcacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgg 113  Q
    |||||||||||||||| |||||| ||||||| |||||| ||||||     |||||||||||||||| || ||||||||| || |||||| || | |||||    
T  1769466 atcacatacaaacaaatgacaatgtggtaatattaacatacaaaaggagtacattaattacactgataacatttcttaaaaaatgtgaaaaaagtaatgg 1769565  T
Q  114 gtg-ctacattaagggacg 131  Q
     || |||||||||| ||||    
T  1769566 atgcctacattaagagacg 1769584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 12998714 - 12998800
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| || |||||||||| |  ||||||||||  ||||||||  ||||||||||| ||||||    
T  12998714 cacatacaaacaaaggacaatttagtaatattcacacacaaaatatgcacattaattgaactgacaacttttcttaagaaatgtgaa 12998800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 14906683 - 14906627
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||||| || ||||||||||| ||||||||||||| ||||| ||||||||||    
T  14906683 atacaaacaaaggataatttggtaatattaacacacaaaatagacatattaattaca 14906627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 31673681 - 31673621
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacac 76  Q
    |||||||||||||| || ||||||||||| |||||| |||||| | |||||||||||||||    
T  31673681 cacatacaaacaaaggataatttggtaatattaacatacaaaataaacacattaattacac 31673621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 43191498 - 43191577
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||| || | | ||| | |||||||||||    
T  43191498 cacatacaaacaaatgacaatttagtaatattaacacataaaatagacacattaactaaattaacattttttcttaagaa 43191577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 45183882 - 45183961
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||| ||||||| |||||||||||||| |||||||| |||||| ||| ||| |||||  ||||||  |||||||||||    
T  45183882 cacatataaacaaaggacaatttggtaatattaacacataaaacaaacatatttattactatgacaacttttcttaagaa 45183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 45283827 - 45283882
Alignment:
Q  40 gtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||| |||||||| ||||||||||||||||||||| ||| ||| |||||||||||    
T  45283827 gtaatattaacacataaaacagacacattaattacattgataatttttcttaagaa 45283882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 44255534 - 44255480
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattac 74  Q
    |||||||||| ||||||||| |||| ||||||||||||| || ||||||||||||    
T  44255534 tacaaacaaatgacaatttgataatattaacacacaaaaaaggcacattaattac 44255480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 14739514 - 14739438
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||| ||||||||| || ||||||||||| |||||| | |||| | ||||||||||||||| |||||  ||||||||    
T  14739514 cacacacaaacaaaggataatttggtaatattaacatataaaataaacacattaattacacggacaacttttcttaa 14739438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 34158002 - 34157951
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacat 67  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||    
T  34158002 cacatacaaacaaatgacaatttagtaatattaacacataaaatagacacat 34157951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 3006802 - 3006892
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaag 106  Q
    |||||||| | ||| || ||||| ||||| |||||||| |||| ||||| |||||||| ||| ||||  ||||||||||| | ||||||||    
T  3006802 cacatacagataaatgataatttagtaatattaacacataaaatagacatattaattatactaacaacttttcttaagaaatatgaagaag 3006892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 34653396 - 34653275
Alignment:
Q  145 ttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaata 244  Q
    ||||||||| |||||||||||  ||   | |||| |||| |||||||||  ||||| ||||||||||| |||  ||||||| ||| | ||||||| ||||    
T  34653396 ttaaagtactaaaataagtaacattactacaaaaagttgtgtaattattg-caagacaaaagtaaaaacttgcgttttcaagacataatttctactaata 34653298  T
Q  245 gattctttaaccaatgccattag 267  Q
    ||||| ||||||| |||| ||||    
T  34653297 gattccttaaccattgcccttag 34653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 35794827 - 35794777
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacaca 66  Q
    |||||||||||||| ||||||||| |||| |||| |||||||| |||||||    
T  35794827 cacatacaaacaaatgacaatttgataatattaatacacaaaatagacaca 35794777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 40602062 - 40602123
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    |||||||||||||| || ||||| ||||| |||||||| |||  ||||||||||||| ||||    
T  40602062 cacatacaaacaaaggataatttagtaatattaacacataaataagacacattaattgcact 40602123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 5085108 - 5085233
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||| || |||||| ||||||||||||    
T  5085108 cacatacaaacaaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaatgggt 5085207  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| ||||||||    
T  5085208 gcctacattaagggacggagggagta 5085233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 33231924 - 33231799
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||| |||||||||| |    
T  33231924 cacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaatggat 33231825  T
Q  116 -gctacattaagggacgcagggagta 140  Q
     |||||||||||||||| ||||||||    
T  33231824 ggctacattaagggacggagggagta 33231799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 32047526 - 32047403
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||| || |||||||||    
T  32047526 cacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaatgggt 32047427  T
Q  116 g-ctacattaagggacgcagggag 138  Q
    | ||||||||||||||| ||||||    
T  32047426 gcctacattaagggacggagggag 32047403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 48721887 - 48722010
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtg-aagaaggcaatggg 114  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| |||| || |||||||||||    
T  48721887 cacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacagcttttcttaagaaatgtgaaaaaaggcaatggg 48721986  T
Q  115 tg-ctacattaagggacgcaggga 137  Q
    || ||||||||||||||| |||||    
T  48721987 tgcctacattaagggacggaggga 48722010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 3143487 - 3143361
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||| |||||||||||||||| ||||| |||||||||||| ||||||||||||||||| ||||||  ||||||||||| |||||| || |||||||||    
T  3143487 cacataaaaacaaaagacaattttgtaatattaacacacaaagcagacacattaattacaatgacaacttttcttaagaaatgtgaaaaaagcaatgggt 3143388  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||||||||  |||||||||    
T  3143387 gcctacattaagggacagagggagtat 3143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 16582617 - 16582492
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||| |||||| |    
T  16582617 cacatacaaataaaagacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatggat 16582518  T
Q  116 -gctacattaagggacgcagggagta 140  Q
     |||||||||||| ||  ||||||||    
T  16582517 ggctacattaaggaacagagggagta 16582492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 29140673 - 29140799
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||| | |||  ||||||||||| |||||| |||||||| | |    
T  29140673 cacatacaaacaaaggacaattttgtaatattaatacacaaaacagacacattaattacaccggcaacttttcttaagaaatgtgaaaaaggcaatagat 29140772  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||| ||||| |||||||||    
T  29140773 gactacattaaaggacggagggagtat 29140799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30898582 - 30898668
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  30898582 cacatacaaacaaaggataatttggtaatattaacacataaaacagacacattaattacactgacaatttttcttaagaaatgtgaa 30898668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 8877856 - 8877731
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||| |||||||||||| ||||||||| |||||||| || | |||| ||||||||| ||    
T  8877856 cacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattatactgacaatttttcttaaaaaatatgaaaaaggcaatgagt 8877757  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||| ||||| || |||||    
T  8877756 gtctacattaaaggacggagagagta 8877731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 34696902 - 34697027
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||||  |||||||| || |||||| ||| || ||| |    
T  34696902 cacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacatattaattacactgacaacttttcttaaaaaatgtgaaaaagacagtggat 34697001  T
Q  116 -gctacattaagggacgcagggagta 140  Q
      ||||||||||||||| ||||||||    
T  34697002 ccctacattaagggacggagggagta 34697027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 30336141 - 30336017
Alignment:
Q  18 catacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg- 116  Q
    |||| ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||  ||||||||||| |||||| || |||||| |||     
T  30336141 catagaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattacaccgacaacttttcttaagaaatgtgaaaaaagcaatgagtgt 30336042  T
Q  117 ctacattaagggacgcagggagtat 141  Q
    |||||||| |||||  |||||||||    
T  30336041 ctacattatgggaccaagggagtat 30336017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 44335369 - 44335287
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||    
T  44335369 tacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttattaagaaatgtgaa 44335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 9675686 - 9675811
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| ||| |||||||| ||||| |||||||||||| |||||| |||||||||||||||||  |||||||||||  || || ||| ||||||||    
T  9675686 cacatacaaataaaggacaatttcgtaatattaacacacaaatcagacaaattaattacactgacaacttttcttaagaaacgtaaaaaagtcaatgggt 9675785  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| | ||||||    
T  9675786 gcctacattaagggacggatggagta 9675811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 24415084 - 24414975
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || ||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||| ||||| || ||| || |||||||  |||    
T  24415084 cacatacaaacaaatgataatttggtaatattaacacacaaaagagatacattaattacaccgacaatattacttaataaatgtaaaaaaggcaaaaggt 24414985  T
Q  116 gctacattaa 125  Q
    ||||||||||    
T  24414984 gctacattaa 24414975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 8984680 - 8984766
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || ||||||    
T  8984680 cacatacaaacaaatgacaatttagtaatattaacacacaaaacagacacattaattacactaacaattttccttaaaaaatgtgaa 8984766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 38680559 - 38680473
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||| ||||  ||||||||||| ||||||    
T  38680559 cacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaacttttcttaagaaatgtgaa 38680473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 23982614 - 23982739
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtgc- 117  Q
    ||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||| ||||||  ||||||||||| |||||| || |||| |||  |     
T  23982614 atacaaacaaatgtcaatttgataatattaacacacaaaacagacacattaattacattgacaacttttcttaagaaatgtgaaaaatgcaaaggggact 23982713  T
Q  118 tacattaagggacgcagggagtattt 143  Q
    |||||  ||||||| |||||||||||    
T  23982714 tacatatagggacggagggagtattt 23982739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 41737209 - 41737124
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtga 101  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||  ||||||||||| ||||  ||||||||||| |||||    
T  41737209 cacatacaaacaaaagacaatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaagaagtgtga 41737124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 5322045 - 5322173
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-c 117  Q
    |||||||||||  ||||||| ||||| | |||||||||||||||||||||||||||| ||| ||  |||||||| || | |||| |||||||| | || |    
T  5322045 atacaaacaaataacaatttcgtaatataaacacacaaaacagacacattaattacattgataacttttcttaaaaaatatgaaaaaggcaatagatgcc 5322144  T
Q  118 tacattaagggacgcagggagtatttgtt 146  Q
    |||||||||||||| |||||||| |||||    
T  5322145 tacattaagggacggagggagtagttgtt 5322173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 28723672 - 28723748
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  28723672 cacatacaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaa 28723748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 35001289 - 35001417
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| ||||||||  |||  |||||||||||||||||||  || |||||||||||||  |||||||| || |||||| ||| ||||||||    
T  35001289 cacatacaaacaaaggacaatttcataacattaacacacaaaacagacattttgattacactgacaacttttcttaataaatgtgaaaaagacaatgggt 35001388  T
Q  116 g-ctacattaagggacgcagggagtattt 143  Q
    | ||| ||||||||||| | |||||||||    
T  35001389 gcctagattaagggacggaaggagtattt 35001417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 44652880 - 44653003
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||  ||||| ||||||| |||| |||||||||||||||||||||||||||   || |||||||||||| |||||| | |||||||  |    
T  44652880 cacatacaaacaaagaacaatgtggtaatattaaaacacaaaacagacacattaattacact---aacatttcttaagaaatgtgaaaatggcaatgaat 44652976  T
Q  116 -gctacattaagggacgcagggagtat 141  Q
     |||||||||| ||||| |||||||||    
T  44652977 ggctacattaaaggacggagggagtat 44653003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 2342988 - 2342902
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||| || ||| ||||| |||||||| || ||||||    
T  2342988 cacacacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaagtaaactaacaatttttcttaaaaaatgtgaa 2342902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 13723497 - 13723599
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || ||||||||||| |||| |||||||| ||||||||||||| |||| ||||  ||||||||||| |||||| || |||| ||||    
T  13723497 cacatacaaacaaaggataatttggtaatattaatacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaatgcaaagggt 13723596  T
Q  116 gct 118  Q
    |||    
T  13723597 gct 13723599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 15179494 - 15179408
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| || || || |||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  15179494 cacatacaaacaaaggacaattttgtaatatttacgcataaaatagacacattaattacactgacaatttttcttaagaaatgtgaa 15179408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 16395567 - 16395657
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttctt-aagaattgtgaagaa 105  Q
    ||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||||||| || || ||||||| || ||||||||||||    
T  16395567 cacatacaaacaaaagataatttggtaatattaacatacaaaatagacacattaattacaccgataacatttcttaaaaaattgtgaagaa 16395657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 31807991 - 31808077
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||| ||||  ||||| ||||| ||||||    
T  31807991 cacatgcaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacactaacaacttttctcaagaagtgtgaa 31808077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 46495392 - 46495326
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaat 83  Q
    ||||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  46495392 acatacaaataaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaat 46495326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 50692493 - 50692407
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||| || ||||||  ||||||||||| ||||||    
T  50692493 cacatacaaacaaaggacaatttggtaatactaacacacaaaatagacacattaattgcattgacaacttttcttaagaaatgtgaa 50692407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 25269461 - 25269364
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgg 113  Q
    |||||||||||||| || ||||| ||||| |||||||| ||||||||||||||| ||||||||||||  |||||||| || |||||| ||| ||||||    
T  25269461 cacatacaaacaaaggaaaatttcgtaatattaacacataaaacagacacattatttacactgacaacttttcttaaaaaatgtgaaaaagacaatgg 25269364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 28334265 - 28334334
Alignment:
Q  47 taacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||| |||||||||    
T  28334265 taacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatgggtg 28334334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 36085054 - 36084938
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| ||| || |||||  |||| ||||||||||||||||| |||||||||||||||| ||| |||||||| || |||||| ||| |||||  |    
T  36085054 cacatacaaataaaggataatttcttaatattaacacacaaaacagatacattaattacactgataatttttcttaaaaaatgtgaaaaagacaatgatt 36084955  T
Q  116 g-ctacattaagggacg 131  Q
    | |||||||||||||||    
T  36084954 gcctacattaagggacg 36084938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 44395618 - 44395518
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    ||||||||||||| || ||||| ||||| |||||||| |||| | ||| ||||||||||||||||| |||||||||||| |||||| | | |||||||||    
T  44395618 acatacaaacaaaggataattttgtaatattaacacataaaataaacatattaattacactgacaacatttcttaagaaatgtgaaaaggacaatgggtg 44395519  T
Q  117 c 117  Q
    |    
T  44395518 c 44395518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 47754661 - 47754740
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||||||||| |||||||| |||| ||||||||||||| |||| ||||| ||| |||||||    
T  47754661 cacatacaaacaaatgacaatttggtaatattaacacaaaaaatagacacattaattgcactaacaattttttttaagaa 47754740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 51997039 - 51996960
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| ||| |||||||||| |||||||| |||||| ||| |||||||||||||||||  |||||||||||    
T  51997039 cacatacaaacaaaggacgatttggtaatattaacacagaaaacatacaaattaattacactgacaacttttcttaagaa 51996960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 15512800 - 15512886
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||| |||||| ||||  ||||||||||| ||||||    
T  15512800 cacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 15512886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 27531182 - 27531056
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    |||||||||||||  ||||||  ||||| ||||||||||||||| |||||||||||| ||||||||  ||||||||||| |||||| || |||| |||      
T  27531182 acatacaaacaaagaacaattaagtaatattaacacacaaaacaaacacattaattatactgacaacttttcttaagaaatgtgaaaaatgcaaagggaa 27531083  T
Q  117 c-tacattaagggacgcagggagtatt 142  Q
    | |||||  ||||||| ||||||||||    
T  27531082 cttacatacagggacggagggagtatt 27531056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 28948983 - 28949069
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||| |||||| ||||  ||||||||||| ||||||    
T  28948983 cacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 28949069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 32152242 - 32152156
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||| |||  ||||  ||||||||||| ||||||    
T  32152242 cacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattgcaccaacaacttttcttaagaaatgtgaa 32152156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 44163316 - 44163230
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||| |||||||||||||||||| ||  ||| ||||||| ||||||    
T  44163316 cacatacaaacaaatgacaatttaataatattaacacacaaaacaaacacattaattacactgataactttttttaagaaatgtgaa 44163230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 13352917 - 13352829
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaa 105  Q
    ||||||||| ||| ||||||||| |||| |||||||| ||||||||||||||||||  ||| || | |||||||||||| |||||||||    
T  13352917 acatacaaataaatgacaatttgctaatattaacacataaaacagacacattaattgaactaactacatttcttaagaaatgtgaagaa 13352829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 4817925 - 4818009
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||||||||||||| |||| |||| |||||||||  ||||| ||||||||| |||||  ||||||||||| ||||||    
T  4817925 cacatacaaacaaaagacaatttgataatattaatacacaaaac--acacaataattacaccgacaacttttcttaagaaatgtgaa 4818009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 4829725 - 4829809
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||||||||||||| |||| |||| |||||||||  ||||| ||||||||| |||||  ||||||||||| ||||||    
T  4829725 cacatacaaacaaaagacaatttgataatattaatacacaaaac--acacaataattacaccgacaacttttcttaagaaatgtgaa 4829809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 34102419 - 34102344
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||  | |||||| |||| |||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  34102419 acatacaaacaaagaataatttgataatattaacacacaaaacagacacattaattacaatgaaaatttttcttaa 34102344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 47070982 - 47071041
Alignment:
Q  18 catacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    |||||||||||| |||||||||||||| |||||||| |||| ||||||||||||||||||    
T  47070982 catacaaacaaatgacaatttggtaatattaacacataaaatagacacattaattacact 47071041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 47643624 - 47643540
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| |||||||| |||||||| ||||| ||||||||  ||||| |||||||||||||||||||||  ||||||||||| ||||||    
T  47643624 cacatgcaaacaaaggacaatttagtaatattaacaca--aaacatacacattaattacactgacaacttttcttaagaaatgtgaa 47643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 4813481 - 4813567
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||  | ||||||||||| ||||||||||||| ||||||||||||| || | ||||  ||||||||||| ||||||    
T  4813481 cacatacaaacaaagaataatttggtaatattaacacacaaaatagacacattaattgcattaacaacttttcttaagaaatgtgaa 4813567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 31305402 - 31305316
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||||||| ||| || |||||| |||||||||||||||||  ||||  |||||||| || ||||||    
T  31305402 cacatacaaacaaaggacaatttggtaatattagcatacaaaatagacacattaattacaccaacaacttttcttaataaatgtgaa 31305316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 35366003 - 35366069
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||| |||||| ||||||| ||||    
T  35366003 cacatacaaacaaaagacaatttgataatattaacacacaaaatagatacattacttacactaacaa 35366069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 25063294 - 25063241
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacatta 69  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  25063294 cacatacaaacaaaggacaattaggtaatattaacacacaaaacagacacatta 25063241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 52141194 - 52141282
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagaca--cattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| |||||  ||||||||||||| | ||| |||||||| || ||||||    
T  52141194 cacatacaaacaaaagataatttgataatattaacacacaaaatagacacgcattaattacactaataatttttcttaaaaaatgtgaa 52141282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 12188639 - 12188731
Alignment:
Q  146 taaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttcta 238  Q
    |||||||| |||||||||||||||||| | |||  | | |||||||||   |||| |||||||||||||||||||| ||| ||||||||||||    
T  12188639 taaagtactaaaataagtaattttgtattgaaaaatggtgtaattattgctaagaaaaaagtaaaaatttgtatttccaagacaaagtttcta 12188731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 15911571 - 15911655
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtg 100  Q
    |||||||||||||| |   |||||||||| ||||||||||||| ||||||||||| |||||| ||||  ||||||||||| ||||    
T  15911571 cacatacaaacaaatggttatttggtaatattaacacacaaaatagacacattaagtacactaacaacttttcttaagaaatgtg 15911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 46591186 - 46591110
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||| ||||||| ||||||| | |||| ||||||||||||||| |||||||||||||||| ||||  ||||||||    
T  46591186 cacatagaaacaaaggacaattcgataatattaacacacaaaacaaacacattaattacactcacaacttttcttaa 46591110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 13145502 - 13145439
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactga 79  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||||| ||||| || |||||    
T  13145502 cacatacaaacaaaggacaatttggtaatattaacatacaaaacagacatattaactatactga 13145439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 32144395 - 32144316
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||| | |||  ||||  |||||||||||    
T  32144395 cacatacaaacaaatgacaatttggtaatattaacgcacaaaatagacacattaaatgcaccaacaacttttcttaagaa 32144316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 34012134 - 34012075
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||||||  |||| |||||||| |||||||||||||||||| |||||||||    
T  34012134 aaacaaaagacaatttcataatattaacacataaaacagacacattaattgcactgacaa 34012075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 3831130 - 3831008
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| ||| ||||||||   ||||| ||  |||||||| || |||||| || ||||| ||||    
T  3831130 acatacaaacaaatgacaatttcgtaatattaacacacaaaatagatacattaat--aactgataacttttcttaaaaaatgtgaaaaatgcaataggtg 3831033  T
Q  117 -ctacattaagggacgcagggagta 140  Q
      |||||||||||||| | ||||||    
T  3831032 tttacattaagggacggaaggagta 3831008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 25258414 - 25258338
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||| |||||||||||||| | || ||| |||| ||||||||||||| |||| ||||  ||||||||    
T  25258414 cacatacaaacaaaggacaatttggtaatatcaagacataaaatagacacattaattgcactaacaacttttcttaa 25258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 3143756 - 3143831
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaaga 94  Q
    ||||||||||||||||||||||| ||||  ||  |||||||| ||||||||||||||||||  |||  ||||||||||    
T  3143756 acatacaaacaaaagacaatttgataataata--acacaaaatagacacattaattacactatcaacttttcttaaga 3143831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 10160760 - 10160678
Alignment:
Q  59 cagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctacattaagggacgcagggagta 140  Q
    ||||||||||||||||||||| ||  ||||||||||| |||||| ||||||| || || ||| ||||||||| | ||||||||    
T  10160760 cagacacattaattacactgataacttttcttaagaaatgtgaaaaaggcaacggatgcctatattaagggatggagggagta 10160678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 16632816 - 16632746
Alignment:
Q  139 tatttgttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaa 209  Q
    ||||||||||||||  |||||||| || ||||||||||||  ||| |||||||||| ||||| ||||||||    
T  16632816 tatttgttaaagtattaaaataagcaactttgtaataaaaaattgtgtaattattaccaagacaaaagtaa 16632746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20564859 - 20564773
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||||||||||||| ||||| |||||||| |||  |||||||||| |||||||  |||  |||||||| || ||||||    
T  20564859 cacattcaaacaaaagacaattttgtaatattaacacataaagtagacacattagttacactatcaacttttcttaacaaatgtgaa 20564773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 46536653 - 46536735
Alignment:
Q  145 ttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaa 227  Q
    ||||||||  |||||||||||||||| |||| || |||| ||| |||||   |||| ||||||||||| ||||||||||||||    
T  46536653 ttaaagtattaaaataagtaattttgcaatacaaagttgtgtagttattgataagacaaaagtaaaaacttgtattttcaaaa 46536735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 51390556 - 51390609
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||||||||||||| |||||||||||||   |||||||||||| |||||||||||||    
T  51390556 cacatacaaacaaatgacaatttggtaa---taacacacaaaatagacacattaatt 51390609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 29302498 - 29302579
Alignment:
Q  46 ttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctacattaag 126  Q
    |||||| |||||||| | ||||| |||||||||||||  ||||||||||| |||||| |||| ||||| || ||||||||||    
T  29302498 ttaacatacaaaacaaatacattgattacactgacaacttttcttaagaaatgtgaaaaagggaatggatgcctacattaag 29302579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 43189178 - 43189102
Alignment:
Q  27 aaaagacaatttggtaatgttaacacacaaaacagacacat--taattacactgacaatatttcttaagaattgtga 101  Q
    |||||||||||||||||| |||||| |||||| ||||| ||  ||||| |||| ||||  |||||||||||||||||    
T  43189178 aaaagacaatttggtaatattaacatacaaaatagacatattataattgcactaacaacttttcttaagaattgtga 43189102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 9684752 - 9684796
Alignment:
Q  31 gacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  9684752 gacaattttgtaatattaacgcacaaaacagacacattaattaca 9684796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 28679841 - 28679896
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    ||||||||||||||| |||||||  |||| ||||||||||||| |||||||||||||    
T  28679841 cacatacaaacaaaa-acaatttaataatattaacacacaaaatagacacattaatt 28679896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 8772511 - 8772420
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagttt 235  Q
    |||||||||| ||||||||||| |||| |   ||| || | |||||||||  ||||| ||||||||| | |||||||||||| |||||||||    
T  8772511 gttaaagtactaaaataagtaaatttgcatcgaaaagtggtgtaattattgccaagacaaaagtaaagacttgtattttcaagacaaagttt 8772420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 10842411 - 10842327
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || ||||||||||| |||  |||||||| ||||| ||||||| || | ||||  ||||||||||| ||||||    
T  10842411 cacatacaaacaaacgataatttggtaatatta--acacaaaatagacatattaattgcattaacaacttttcttaagaaatgtgaa 10842327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 47133463 - 47133517
Alignment:
Q  21 acaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||| ||||||||  |||| ||||||||||||| | ||||||||||||||    
T  47133463 acaaacaaatgacaatttaataatattaacacacaaaataaacacattaattaca 47133517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 6282551 - 6282462
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatg 112  Q
    ||||||| ||||||||  |||| |||||||| |||| |||||||||||||  ||| ||||| ||||||| |||  ||||| ||| |||||    
T  6282551 aaacaaaggacaattttataatattaacacataaaatagacacattaattgtactaacaatttttcttatgaaacgtgaaaaagccaatg 6282462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 40261678 - 40261593
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||| | ||||||| |||| ||||||||||||| | ||||||||||| |||| || |  |||| |||||| ||||||    
T  40261678 acatataaacaaagggcaatttgataatattaacacacaaaataaacacattaattgcactaactacttttcataagaaatgtgaa 40261593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40645758 - 40645644
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||||||||| |    
T  40645758 cacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattacacagacaacatttcttaagaaatgtgaaaaaggcaatggat 40645659  T
Q  116 g-ctacattaaggga 129  Q
    | |||||||||||||    
T  40645658 gcctacattaaggga 40645644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 30476124 - 30476000
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||| || |||||| |||||||||||||    
T  30476124 acatacaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaatgggtg 30476025  T
Q  117 -ctacattaagggacgcagggagta 140  Q
     ||||||||||||||| ||||||||    
T  30476024 cctacattaagggacggagggagta 30476000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 29676761 - 29676887
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| |||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||    
T  29676761 cacatacaaataaaagacaatttcgtaatattaacacataaaatagacacattaattacactgacaatttttcttaagaaatatgaaaaaggcaatgggt 29676860  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||||||||| |||||||||    
T  29676861 gcctacattaagggacggagggagtat 29676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 12077765 - 12077881
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||| | |||| || |||||||||    
T  12077765 cacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacactgacaacttttcttaagaaatttgaaaaatgcaatgggt 12077864  T
Q  116 g-ctacattaagggacg 131  Q
    | |||||||||||||||    
T  12077865 gcctacattaagggacg 12077881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 41727260 - 41727373
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||| |||||||||| |    
T  41727260 cacatacaaataaaggacaattttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaatggat 41727359  T
Q  116 -gctacattaaggg 128  Q
     |||||||||||||    
T  41727360 ggctacattaaggg 41727373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 46435753 - 46435838
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  46435753 acatacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaa 46435838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 43187115 - 43187241
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||| ||||||  ||| ||||||| | |||| ||||||||| ||    
T  43187115 cacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacattgacaactttttttaagaaatatgaaaaaggcaatgagt 43187214  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||| ||||| |||||||||    
T  43187215 gactacattaacggacggagggagtat 43187241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 31531448 - 31531533
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  31531448 acatacaaacaaaagacaatttgataatatcaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaa 31531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 13084380 - 13084459
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  13084380 cacatacaaacaaaagataatttggtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaa 13084459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 26043103 - 26043024
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  26043103 cacatacaaacaaaggacaatttggtaacattaacacacaaaacagacatattaattacactgacaatttttcttaagaa 26043024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 11388205 - 11388119
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||||    
T  11388205 cacatacaaacaaaatacaatttggtaatattaacacgcaaaatagacacattaattacactaacaatttttcttaagaaatgtgaa 11388119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 26517237 - 26517323
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  26517237 cacatacaaataaaggacaatttggtaatattaacacagaaaacagacacattaattacactgacaacttttcttaagaaatgtgaa 26517323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 41825159 - 41825245
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||||  ||||||||||| ||||||    
T  41825159 cacatacaaacaaaagataatttggtaatattaacacataaaatagacacattaattacactgacaacttttcttaagaagtgtgaa 41825245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 46048606 - 46048520
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  46048606 cacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaa 46048520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 26121416 - 26121337
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  26121416 cacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttttcttaagaa 26121337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 28477469 - 28477403
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  28477469 cacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattgcaccgacaa 28477403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 50363111 - 50363025
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||||||| |||| ||| |||||||||| |||||||||||||||||| |||||||| || ||||||    
T  50363111 cacatacaaacaaatgacaatttggtaatattaatacataaaacagacatattaattacactgacaatttttcttaaaaaatgtgaa 50363025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 41308798 - 41308890
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggc 108  Q
    |||||| |||||||  | || |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||    
T  41308798 cacatataaacaaagaataaattggtaatattaacacacaaaacagacacattaattacactgacaacattttttaagaaatgtgaaaaaggc 41308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 50092752 - 50092625
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| ||| |||||||| ||||| |||| |||||||||  ||||||||||||||||| |||  ||| ||||||| ||| || |||||||| | |    
T  50092752 cacatacaaataaaggacaattttgtaatattaatacacaaaaccaacacattaattacactgtcaacttttgttaagaaatgtaaaaaaggcaatagat 50092653  T
Q  116 gc-tacattaagggacgcagggagtatt 142  Q
    || |||||||||||||| ||||||||||    
T  50092652 gcttacattaagggacggagggagtatt 50092625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 14645911 - 14645997
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||| ||||  |||||||| || ||||||    
T  14645911 cacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattacactaacaacttttcttaaaaaatgtgaa 14645997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 27047200 - 27047286
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||   ||||||||| | ||||||    
T  27047200 cacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacagcttttcttaaggaatgtgaa 27047286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 29645442 - 29645356
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||||||||| |||| ||||||||| || ||||||    
T  29645442 cacatacaaacaaatgacaatttcgtaatattaacacataaaacagatacattaattacactaacaacatttcttaataaatgtgaa 29645356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 31819490 - 31819404
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||| || ||  ||||||||||| ||||||    
T  31819490 cacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacaccgataacttttcttaagaaatgtgaa 31819404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 39617272 - 39617338
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    |||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  39617272 cacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactgacaa 39617338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 51263166 - 51263080
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| |||||  ||||||| ||||||||||||||||||||||| ||||| ||| ||||||| ||||||    
T  51263166 cacatacaaacaaaggacaatttagtaatactaacacataaaacagacacattaattacactaacaattttttttaagaaatgtgaa 51263080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 29611918 - 29611845
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttct 89  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||| |||| ||||||    
T  29611918 cacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattacactaacaacatttct 29611845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 42891502 - 42891417
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||| ||||  ||||||||||| ||||||    
T  42891502 acatacaaacaaaggacagtttggtaatattaacacacaaaacagacaaattaattatactaacaacttttcttaagaaatgtgaa 42891417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 33411996 - 33412071
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    ||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  33411996 acatacaaagaaaaaacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaa 33412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 20945322 - 20945408
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || |||| |||||| |||||||| |||| |||||||||||||||||| ||||  ||||||||||| ||||||    
T  20945322 cacatacaaacaaaggataattaggtaatattaacacataaaatagacacattaattacactaacaacttttcttaagaaatgtgaa 20945408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 27638099 - 27638225
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| ||||||||  |||| ||||||||||||| ||| |||||||||||||| | ||  ||||||||||| |||||| |||| ||||| |    
T  27638099 cacatacaaacaaaggacaattttataatattaacacacaaaatagagacattaattacactaataacttttcttaagaaatgtgaaaaaggtaatggat 27638198  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||| ||||| ||||| ||| |||||    
T  27638199 gcctatattaaaggacggaggcagtat 27638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 37729051 - 37729137
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||| ||| || |||| ||||||||||||| |||||||||||||| | | ||||| ||||||||||| ||||||    
T  37729051 cacatacaaacaaaagataatatgataatattaacacacaaaatagacacattaattatattaacaatttttcttaagaaatgtgaa 37729137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 50524998 - 50525124
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||||||||| ||||||||||||| | ||| ||||||||| | || |   ||||||||||| |||||| || | || ||||    
T  50524998 cacatacaaacaaaggacaatttggtaatattaacacacaaaatatacatattaattaccccgagagcttttcttaagaaatgtgaaaaaagaaaagggt 50525097  T
Q  116 gc-tacattaagggacgcagggagtat 141  Q
    || |||||||||||||  |||||||||    
T  50525098 gcttacattaagggacagagggagtat 50525124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 54425978 - 54426064
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||||||||| || |||| ||| | | ||||||||||| ||||||    
T  54425978 cacatataaacaaatgacaatttggtaatattaacacacaaaacagacacatcaactacattgatattttttcttaagaaatgtgaa 54426064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 52325526 - 52325611
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||| ||||||||| |||| |||||||| |||| |||||||||||||||||| ||| | ||||||||||| ||||||    
T  52325526 acatataaacaaaggacaatttgataatattaacacataaaatagacacattaattacactaacattttttcttaagaaatgtgaa 52325611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 53717578 - 53717627
Alignment:
Q  46 ttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  53717578 ttaacacacaaaacagacacattaattacattgacaatatttcttaagaa 53717627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 23157149 - 23157093
Alignment:
Q  46 ttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  23157149 ttaactcacaaaacagacacattaattacactgacaatttttcttaagaaatgtgaa 23157093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 34055899 - 34055979
Alignment:
Q  31 gacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaat 111  Q
    ||||||||  |||| ||||||||||||||||||| |||||||||| ||||||| ||| ||||||| |||||| ||||||||    
T  34055899 gacaatttcataatattaacacacaaaacagacatattaattacattgacaattttttttaagaaatgtgaaaaaggcaat 34055979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 44083711 - 44083635
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||| || ||||||||||| ||||||||||||| ||| |||||||||||| | ||||| ||||||||    
T  44083711 cacatacaaacaaatgataatttggtaatattaacacacaaaatagatacattaattacaataacaatttttcttaa 44083635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 11344624 - 11344517
Alignment:
Q  34 aatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggc-aatgggtgctacattaagggacgc 132  Q
    ||||||||||||||||||||||||| |||||||||||||||||  | ||  ||||||||||| |||||| || || || |||   ||||||||||||||     
T  11344624 aatttggtaatgttaacacacaaaatagacacattaattacaccaataacttttcttaagaaatgtgaaaaaagcaaaagggacttacattaagggacga 11344525  T
Q  133 agggagta 140  Q
    ||||||||    
T  11344524 agggagta 11344517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 22659664 - 22659585
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| | | |||||||||| ||| ||||  |||||||||||    
T  22659664 cacatacaaacaaaagataatttggtaatattaacacacaaaataaatacattaattatactaacaacttttcttaagaa 22659585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 5504604 - 5504690
Alignment:
Q  56 aaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctacattaagggacgcagggagtat 141  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||| | || || ||||| ||||||||||||||  |||||||||    
T  5504604 aaacagatacattaattacactgacaacatttcttaagaaatgtgaaaagggaaacgggtgcctacattaagggaccgagggagtat 5504690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 26998975 - 26998893
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||| |||||||||| | ||||||  ||||||||||| ||||||    
T  26998975 tacaaacaaaagacaatttcgtaatattaacaaacaaaatagatacattaattataatgacaacttttcttaagaaatgtgaa 26998893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 48901542 - 48901628
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaa 105  Q
    ||||||||||| |||||||| ||||| ||||||||||||| ||||| ||||||| |||| || || |||||||| || |||||||||    
T  48901542 atacaaacaaatgacaatttagtaatattaacacacaaaatagacaaattaattgcactaactatttttcttaataaatgtgaagaa 48901628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 48903108 - 48903194
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaa 105  Q
    ||||||||||| |||||||| ||||| ||||||||||||| ||||| ||||||| |||| || || |||||||| || |||||||||    
T  48903108 atacaaacaaatgacaatttagtaatattaacacacaaaatagacaaattaattgcactaactatttttcttaataaatgtgaagaa 48903194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 42010951 - 42010866
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||  | |||||| |||| ||||||||||||| |||||||||||||||| | ||||  ||||||||||| ||||||    
T  42010951 acatacaaacaaagaataatttgataatattaacacacaaaatagacacattaattacattaacaaattttcttaagaaatgtgaa 42010866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 11140789 - 11140713
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||| || |||||||||||  |||||||||||||| |||||||| ||||||||| ||  ||||||||    
T  11140789 cacatacaaacaaaggataatttggtaatactaacacacaaaacatacacattatttacactgataacttttcttaa 11140713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 41739995 - 41740051
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||||||||||||| || ||||||||||| ||||||||||||| |||||||||||||    
T  41739995 cacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaatt 41740051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 831382 - 831461
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||| ||||||| |||||||||||||| ||||||| ||| |||  ||||||||||||| ||||||  |||||||||||    
T  831382 cacatataaacaaaggacaatttggtaatattaacacgcaatacatgcacattaattacattgacaacttttcttaagaa 831461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 21933010 - 21932955
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaat 71  Q
    |||||||||||||| || ||||||||||| ||||||||||||| ||||||||||||    
T  21933010 cacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaat 21932955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 25750611 - 25750532
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||  |||| |||||||| ||||||||||||| ||||| |||||||||| | ||||  |||||||||||    
T  25750611 cacatacaaacaaagaacaagttggtaatattaacacacaaaatagacaaattaattacattaacaacctttcttaagaa 25750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 35765685 - 35765752
Alignment:
Q  33 caatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtg 100  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||| ||  ||||||||||| ||||    
T  35765685 caatttggtaatattaatacacaaaacagacatattaattacactgataacttttcttaagaaatgtg 35765752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 26243556 - 26243490
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    |||||||||||||| ||||||||  |||  ||||||||||||||| ||| |||||||||||||||||    
T  26243556 cacatacaaacaaatgacaatttaataacattaacacacaaaacaaacatattaattacactgacaa 26243490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 35055870 - 35055816
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaa 70  Q
    ||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||    
T  35055870 cacatacaagcaaatgacaatttggtaatattaacacacaaaatagacacattaa 35055816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 41543629 - 41543715
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| ||||||||||||  |||| ||| ||||||||| ||||||||||| ||||| |||||  ||| ||||||| ||||||    
T  41543629 cacatacaaataaaagacaattttataatattatcacacaaaatagacacattaaatacacagacaactttttttaagaaatgtgaa 41543715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 50958645 - 50958695
Alignment:
Q  140 atttgttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaatt 190  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  50958645 atttgttaaagtaccaaaataagtaattttgcaataaaaagttgtgtaatt 50958695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 31650688 - 31650789
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    ||||||||| ||| |||||||||||||| ||| |||| |||| ||||||||||||| || | ||||| ||| |||| || |||||| || |||| |||||    
T  31650688 acatacaaataaatgacaatttggtaatattaccacataaaatagacacattaattgcattaacaattttttttaataaatgtgaaaaatgcaaagggtg 31650787  T
Q  117 ct 118  Q
    ||    
T  31650788 ct 31650789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 33287950 - 33287864
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||| ||||||||| ||||||||  |||| ||||||||||||| ||||| ||||||||||||   ||  ||||||||||| ||||||    
T  33287950 cacaaacaaacaaaggacaatttaataatattaacacacaaaatagacaaattaattacactacaaacttttcttaagaaatgtgaa 33287864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 11394005 - 11393940
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||| ||| ||| ||||||||| || | ||||||||||||| |||||||||||||||||| ||||    
T  11394005 acatataaataaatgacaatttgatagtattaacacacaaaatagacacattaattacactaacaa 11393940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 21864380 - 21864297
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||| |||||||||||||||||| ||| |||| |||| ||||||| ||||| ||||| |||| |||||| |||| ||||||    
T  21864380 acatacaaa-aaaagacaatttggtaatattagcacataaaatagacaca-taattgcactgtcaatttttcttgagaaatgtgaa 21864297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 48309528 - 48309440
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaa 105  Q
    |||||||||||||| || ||||| ||||| |||||| |||||| ||||||| ||||| |||| ||||  |||||||||||  ||||||||    
T  48309528 cacatacaaacaaaggataattttgtaatattaacatacaaaatagacaca-taattgcactaacaacttttcttaagaaacgtgaagaa 48309440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 11529378 - 11529306
Alignment:
Q  185 gtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaacca 257  Q
    |||||||||| ||||||||||||||||| ||| || | ||| |||||  |||||| ||| |||||||||||||    
T  11529378 gtaattattaccaagataaaagtaaaaacttgcatctccaagacaaaacttctactaatggattctttaacca 11529306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 35145283 - 35145223
Alignment:
Q  57 aacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtgc 117  Q
    ||||||||| ||||||||||| ||||  ||||||||||| |||||| |||||| |||||||    
T  35145283 aacagacacgttaattacactcacaacttttcttaagaaatgtgaaaaaggcactgggtgc 35145223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 23068086 - 23068029
Alignment:
Q  47 taacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaa 105  Q
    |||||||||||| |||||||||||||||| | ||||| |||||||| || |||||||||    
T  23068086 taacacacaaaatagacacattaattacaataacaatttttcttaa-aaatgtgaagaa 23068029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 44338165 - 44338080
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||| ||||||| |||||||||||||| |||||||| |||  ||||| ||||| |||||| ||||  |||||||| || ||||||    
T  44338165 cacatagaaacaaaggacaatttggtaatattaacacaaaaattagaca-attaactacactaacaacttttcttaaaaaatgtgaa 44338080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 31474508 - 31474455
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacatta 69  Q
    |||||||||||||| || |||||  |||| ||||| ||||||||||||||||||    
T  31474508 cacatacaaacaaatgataatttaataatattaacgcacaaaacagacacatta 31474455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 49452645 - 49452600
Alignment:
Q  217 tattttcaaaacaaagtttctacaaatagattctttaaccaatgcc 262  Q
    ||||||||||||||  ||||||||  ||||||||||||||||||||    
T  49452645 tattttcaaaacaatttttctacatttagattctttaaccaatgcc 49452600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 54730744 - 54730789
Alignment:
Q  185 gtaattattatcaagataaaagtaaaaatttgtattttcaaaacaa 230  Q
    ||||||||||| |||||||||||||||| || ||||||| ||||||    
T  54730744 gtaattattattaagataaaagtaaaaacttatattttctaaacaa 54730789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 25017693 - 25017821
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||  ||||| ||| ||||| ||    
T  25017693 cacatacaaacaaatgacaatttggtaatattaacacacaaaacagacacattaattatactgacaacatttcttaagaaacgtgaaaaagacaatgagt 25017792  T
Q  116 g-ctacattaagggacgcagggagtattt 143  Q
    | ||||||||||||||| |||||||||||    
T  25017793 gtctacattaagggacggagggagtattt 25017821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 34877751 - 34877625
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||| ||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||  |    
T  34877751 cacacacaaacaaatgataatttggtaatattaacacacaaaacagacaaattaattacactgacaacatttcttaagaaatgtgaaaaaggcaatgaat 34877652  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||| ||||| |||||||||    
T  34877651 gtctacattaaaggacggagggagtat 34877625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 21574903 - 21575026
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ct 118  Q
    |||||||||| |||||||||||||| |||||| |||||| ||||||||||| |||||| | || |||||||||||| |||||| ||| ||||||||| ||    
T  21574903 tacaaacaaaggacaatttggtaatattaacatacaaaatagacacattaagtacactaaaaacatttcttaagaaatgtgaaaaagacaatgggtgcct 21575002  T
Q  119 acattaagggacgcagggagtatt 142  Q
    ||||||||||||| ||||||||||    
T  21575003 acattaagggacggagggagtatt 21575026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 27798241 - 27798116
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || |||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| ||  |||||| |    
T  27798241 cacatacaaacaaatgataatttgataatattaacacacaaaacagacaaattaattacactgacaatatttcttaaaaaatgtgaaaaatacaatggat 27798142  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | || |||||||||||| ||||||||    
T  27798141 gcctgcattaagggacggagggagta 27798116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 3247293 - 3247419
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||| |||||||||||| ||||||||||||| |||  ||||||||||| |||||| ||||||||||||    
T  3247293 cacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacatattaattacactgtcaacttttcttaagaaatgtgaaaaaggcaatgggt 3247392  T
Q  116 -gctacattaagggacgcagggagtat 141  Q
      |||| |||||| ||| |||||||||    
T  3247393 atctacgttaaggaacggagggagtat 3247419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 4738715 - 4738590
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||| ||||||| | |||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||| |||||| |    
T  4738715 cacataaaaacaaaggtcaatttagtaatattaacacacaaaacaaatacattaattacactgacaatatttcttaagaaatgtgaaaaagacaatggat 4738616  T
Q  116 gc-tacattaagggacgcagggagta 140  Q
    || | |||||||||| | ||||||||    
T  4738615 gcatgcattaagggatggagggagta 4738590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 15898482 - 15898561
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  15898482 cacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaa 15898561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 36177377 - 36177250
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||| ||  ||||||||||| ||| || ||| |||| | |    
T  36177377 cacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattacactgataacttttcttaagaaatgtaaaaaagacaatagat 36177278  T
Q  116 g-ctacattaagggacgcagggagtatt 142  Q
    | ||||||||||||| | ||||||||||    
T  36177277 gcctacattaagggatggagggagtatt 36177250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 10934091 - 10933965
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||  | ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| || || |||||| ||||||||   |    
T  10934091 cacatacaaacaaagaataatttggtaatattaacatacaaaacagacacattaattacactgacaacatttctgaaaaaatgtgaaaaaggcaataaat 10933992  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||||| ||| |||||||||    
T  10933991 gcctacattaaggaacggagggagtat 10933965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 27587923 - 27587796
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||| || | || |||     
T  27587923 cacatacatacaaaggacaatttagtaatattaacacacaaaacagacacattaattatactgacaacttttcttaagaaatgtgaaaaaagtaaaggga 27587824  T
Q  116 g-ctacattaagggacgcagggagtatt 142  Q
    |  |||||||| ||||| ||||||||||    
T  27587823 gtttacattaaaggacggagggagtatt 27587796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 3559046 - 3559132
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||  ||||| ||||||||||| ||||||    
T  3559046 cacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattataccaacaatttttcttaagaaatgtgaa 3559132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 12895228 - 12895294
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||    
T  12895228 cacatacaaacaaaagacaatttggtaatattaatacacaaaacagacacattaattacaccgacaa 12895294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 5845261 - 5845164
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgg 113  Q
    |||||||||||||| ||||||||| |||| |||| |||||||||| | ||||||||||||||||||| | |||||||||| | |||| ||||||||||    
T  5845261 cacatacaaacaaatgacaatttgataatattaatacacaaaacaaatacattaattacactgacaacaattcttaagaaatatgaaaaaggcaatgg 5845164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 10523293 - 10523369
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||    
T  10523293 cacataaaaacaaaaaacaatttggtaatattaacacacaaaacagacacattaattacactgataacttttcttaa 10523369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 3631139 - 3631253
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| | |||||  ||||| |||||||||||||| |||||||||||||||| |||||| ||| ||||||| |||||| ||| |||||| |    
T  3631139 cacatacaaacaaaggtcaattgcgtaatattaacacacaaaaccgacacattaattacac-gacaat-ttttttaagaaatgtgaaaaagacaatggat 3631236  T
Q  116 g-ctacattaagggacg 131  Q
    | |||||||||||||||    
T  3631237 gcctacattaagggacg 3631253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 31642488 - 31642563
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||| |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  31642488 cacatataaacaaaagacagtttggtaatattaacacacaaaa-agacacattaattacactgacaattttttttaa 31642563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 20946172 - 20946070
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| ||||||||| |||| ||||||||||||| |||||| |||||| |||| ||||  ||||||||||| | |||| || ||||||| |    
T  20946172 cacatacaaacaaatgacaatttgataatattaacacacaaaatagacacgttaattgcactaacaacgtttcttaagaaatatgaaaaatgcaatggat 20946073  T
Q  116 gct 118  Q
    |||    
T  20946072 gct 20946070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 29866274 - 29866188
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||| ||||||| |||| ||||  ||||||||||| ||||||    
T  29866274 cacatacaaacaaaggacaacttggtaatattaacacacaaaaaagacatattaattgcactaacaacttttcttaagaaatgtgaa 29866188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 39690505 - 39690591
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||| |||||| ||||  ||||||||||| ||||||    
T  39690505 cacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 39690591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 43060529 - 43060595
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  43060529 cacatacaaacaaaagataatatggtaatattaacacacaaaatagacacattaattacactaacaa 43060595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 15967149 - 15967217
Alignment:
Q  34 aatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||| |||| |||||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  15967149 aatttggtaatattaatacacaaaacagacacattaattacaccgacaacctttcttaagaaatgtgaa 15967217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 25690706 - 25690833
Alignment:
Q  16 cacatacaaacaaaagacaatttggta--atgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgg 113  Q
    |||||||||||||| |||||||||  |  || ||||||||||||||| ||||||||||||||| |||||  ||||||||||| |||||| || |||| ||    
T  25690706 cacatacaaacaaaggacaatttgtaactatattaacacacaaaacatacacattaattacaccgacaacttttcttaagaaatgtgaacaaagcaaagg 25690805  T
Q  114 gtgct-acattaagggacgcagggagta 140  Q
    | ||| |||| | |||||| ||||||||    
T  25690806 gggctaacataaggggacggagggagta 25690833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 27642587 - 27642467
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || ||||| ||||| |||||||| |||| ||||||||||| |||||| ||||  ||||||||||| |||||| || |||| |||     
T  27642587 cacatacaaacaaaggataatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagggg 27642488  T
Q  116 gctacattaagggacgcaggg 136  Q
    | |||||  ||||||| ||||    
T  27642487 gttacatatagggacggaggg 27642467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 10418601 - 10418704
Alignment:
Q  145 ttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaata 244  Q
    ||||||||  ||||||||||| |||| |||||||||||| ||||||||| | || | |||| |||||| ||||||||| || ||||||||| ||| ||||    
T  10418601 ttaaagtattaaaataagtaactttgaaataaaatgttgtgtaattattgttaaaacaaaaataaaaacttgtattttgaagacaaagtttatactaata 10418700  T
Q  245 gatt 248  Q
    ||||    
T  10418701 gatt 10418704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 35980696 - 35980793
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgta--ttttcaaaacaaagtttctaca 240  Q
    ||||||||| |||||||| |||||||| |||||||  ||| ||||||||| |||||| |||||||||||||||||  ||||||| | ||||||||||||    
T  35980696 gttaaagtatcaaaataaataattttgcaataaaaa-ttgtgtaattattgtcaagacaaaagtaaaaatttgtattttttcaagataaagtttctaca 35980793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 36347620 - 36347699
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||||  ||||||| |||| |||| |||||||||||| |||||||||||||||||||  ||| |||||||    
T  36347620 cacatacaaacaaaaatcaatttgataatattaatacacaaaacagatacattaattacactgacaacttttattaagaa 36347699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 21912205 - 21912119
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||||||||||||  |||| |||||||| |||| ||||||||||| |||||| ||||  |||||||| || ||||||    
T  21912205 cacatacaaacaaaagacaatttaataatattaacacataaaatagacacattaactacactaacaacttttcttaataaatgtgaa 21912119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 33085332 - 33085402
Alignment:
Q  197 aagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgccattag 267  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| ||| ||||| |||||||||||| ||||    
T  33085332 aagacaaaagtaaaaatttatattttcaagacaaagtttctactaatggattccttaaccaatgcccttag 33085402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 35569024 - 35569110
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||  | ||||| ||||| |||| ||| ||||||||||||||||||||||||| ||  ||||||||||| ||||||    
T  35569024 cacatacaaacaaagaataatttagtaatattaatacataaaacagacacattaattacactgataacttttcttaagaaatgtgaa 35569110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 12487157 - 12487096
Alignment:
Q  202 aaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgcca 263  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||| |||||    
T  12487157 aaaagtaaaaatttgtattttcaagacaaaatttctactaatagattccttaaccattgcca 12487096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 600847 - 600771
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||| ||||||||| |||| |||||||||| || ||||||||||||| |||| ||||  |||||||||||    
T  600847 atacaaacaaatgacaatttgataatattaacacacataatagacacattaattgcactaacaagttttcttaagaa 600771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 32067906 - 32067834
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||| |||| |||| || || |||||||||||    
T  32067906 aaacaaatgacaatttggtaatattaacacacaaaatagacacatgaattgcactaactatttttcttaagaa 32067834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 19281510 - 19281569
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||||||||||| ||||| ||||| |||| |||||||||||| ||||||||||||    
T  19281510 cacatacaaacaaaagataatttagtaatattaatacacaaaacagatacattaattaca 19281569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 4745212 - 4745151
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    |||||||||||||| |||||||||||||| ||||| ||||||| | ||||||||||| ||||    
T  4745212 cacatacaaacaaatgacaatttggtaatattaacccacaaaataaacacattaattgcact 4745151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 4857513 - 4857570
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatta 73  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||||||    
T  4857513 cacatacaaacaaatgacaatttagtaatattaacacataaaatagacacattaatta 4857570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 33862849 - 33862910
Alignment:
Q  31 gacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||| ||||| |||  | ||||||||||||||||||||||||||||||| ||||||||    
T  33862849 gacaatttagtaatattagtatacaaaacagacacattaattacactgacaatttttcttaa 33862910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 41521273 - 41521197
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||| ||||||| ||||||||  |||| ||||||||||||| ||||| ||||||| |||| ||||| ||||||||    
T  41521273 cacatataaacaaatgacaatttaataatattaacacacaaaatagacatattaatttcactaacaatttttcttaa 41521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 129679 - 129632
Alignment:
Q  32 acaatttggtaatgttaacacacaaaacagacacattaattacactga 79  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  129679 acaatttggtaatattaatacacaaaatagacacattaattacactga 129632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 279
Target Start/End: Complemental strand, 26402118 - 26401983
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaat 243  Q
    |||| ||||| |||||||||||||||  ||||||| |||| ||||| ||| | |||| |||||| |||  ||| |||| ||| ||||| ||||||| |||    
T  26402118 gttagagtactaaaataagtaatttttcaataaaaagttgtgtaatcattgttaagacaaaagtgaaagcttgcatttccaatacaaaatttctactaat 26402019  T
Q  244 agattctttaaccaatgccattagaacactagttag 279  Q
     ||||| ||||||| ||   |||| |||||||||||    
T  26402018 ggattccttaaccattgttcttaggacactagttag 26401983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 40979231 - 40979342
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||| |||||||||| |||  ||||||||  ||||||  ||| ||||||| | |||| ||| |||||| |    
T  40979231 cacatacaaacaaaggacaatttcgtaatattaatacacaaaacatacatgttaattaccttgacaacttttattaagaaatatgaaaaagacaatggat 40979330  T
Q  116 g-ctacattaag 126  Q
    | ||||||||||    
T  40979331 gcctacattaag 40979342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 43454067 - 43453988
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||||| | |||| |||| |||||| ||||||| ||||||||||||| ||| ||||  ||| |||||||    
T  43454067 cacatacaaacaaaagatagtttgataatattaacatacaaaactgacacattaattatactaacaactttttttaagaa 43453988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 30348096 - 30348150
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaa 70  Q
    |||| ||||||||| || ||||||||||| ||||||||||||| |||||||||||    
T  30348096 cacacacaaacaaaggaaaatttggtaatattaacacacaaaatagacacattaa 30348150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 7510670 - 7510605
Alignment:
Q  37 ttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||| ||||||||||||||| |||||||||||||||| | ||  |||||||| || ||||||    
T  7510670 ttggtaatattaacacacaaaacatacacattaattacactaataacttttcttaaaaaatgtgaa 7510605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 9375659 - 9375700
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaa 58  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  9375659 acatacaaacaaaagacaatttggtaatattagcacacaaaa 9375700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 18729648 - 18729587
Alignment:
Q  41 taatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||| ||||||||||||| |||||||||||||||||  | ||| ||||||||||| ||||||    
T  18729648 taatattaacacacaaaatagacacattaattacacaaataatttttcttaagaaatgtgaa 18729587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 731971 - 732031
Alignment:
Q  16 cacatacaaacaaaaga-caatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||| ||| ||||| ||||    
T  731971 cacatacaaacaaaagaacaatttgataatattaacacacaaaacaaacatattaactaca 732031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 10656672 - 10656591
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||| |||||| ||||||||||| |||||||| |||  | ||||||||||| || | ||||| ||||||||||| ||||||    
T  10656672 atacaaaaaaaagataatttggtaattttaacacataaa--atacacattaattgcattaacaatttttcttaagaaatgtgaa 10656591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 35626643 - 35626727
Alignment:
Q  197 aagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgccattagaacactagttagca 281  Q
    |||| ||||||||||| || ||||||||||||||| ||||||  ||| ||||| ||||||| || | ||||  ||||||||||||    
T  35626643 aagacaaaagtaaaaacttatattttcaaaacaaaatttctattaatggattccttaaccattgtccttagggcactagttagca 35626727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 29874253 - 29874202
Alignment:
Q  26 caaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    |||| |||||||||||||| ||||||||||||| ||| ||||||| ||||||    
T  29874253 caaatgacaatttggtaatattaacacacaaaatagatacattaactacact 29874202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 11980777 - 11980735
Alignment:
Q  40 gtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||    
T  11980777 gtaatattaacacacaaaatagacacattaattacactaacaa 11980735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 27925394 - 27925336
Alignment:
Q  84 atttcttaagaattgtgaagaaggcaatgggtg-ctacattaagggacgcagggagtat 141  Q
    |||||||||||| |||||| || |||||||||| |||||| |||||||| |||||||||    
T  27925394 atttcttaagaaatgtgaaaaaagcaatgggtgcctacataaagggacggagggagtat 27925336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 32402092 - 32402142
Alignment:
Q  32 acaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||| | ||||| ||| |||||||||||||||| ||||||||    
T  32402092 acaatttggtaatatcaacacgcaacacagacacattaattaaactgacaa 32402142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 40132440 - 40132498
Alignment:
Q  201 taaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaat 259  Q
    ||||||||||||||||||||||||||| ||| ||| ||  ||||||||  |||||||||    
T  40132440 taaaagtaaaaatttgtattttcaaaataaaatttttatcaatagatttcttaaccaat 40132498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 262
Target Start/End: Complemental strand, 1638086 - 1637969
Alignment:
Q  145 ttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaata 244  Q
    |||||| || ||||||| ||| |||| |  |||| |||| |||||||||   |||| |||||||||||||||||||| ||| ||||| ||| ||  ||||    
T  1638086 ttaaagaactaaaataaataagtttgcatcaaaaagttgtgtaattattgctaagaaaaaagtaaaaatttgtatttccaagacaaaatttatattaata 1637987  T
Q  245 gattctttaaccaatgcc 262  Q
    || || ||||||| ||||    
T  1637986 gaatcattaaccattgcc 1637969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 16969459 - 16969367
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggc 108  Q
    |||||||||| |||  ||| |||| |||| |||||| |||||  |||||||||||||| ||| ||||| ||| |||| || |||||| |||||    
T  16969459 cacatacaaataaataacagtttgataatattaacaaacaaattagacacattaattatactaacaatttttgttaaaaaatgtgaaaaaggc 16969367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 42644498 - 42644558
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    ||||||||||||| ||||||||| |||| ||| || |||||| |  |||||||||||||||    
T  42644498 acatacaaacaaatgacaatttgataatattagcatacaaaataatcacattaattacact 42644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 8065092 - 8065217
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||| | |||||||||     
T  8065092 cacatacaaacaaaggataatttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaggaaatgtgaaaagggcaatggga 8065191  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| ||||||||    
T  8065192 gcctacattaagggacggagggagta 8065217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 9718192 - 9718317
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||||||| |    
T  9718192 cacatacaaacaaagaataatttggtaatattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaaaaatgcaatggat 9718291  T
Q  116 -gctacattaagggacgcagggagta 140  Q
     |||||||||||||||| ||||||||    
T  9718292 ggctacattaagggacggagggagta 9718317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 41665795 - 41665667
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| ||||||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||  ||||| ||    
T  41665795 cacatacaaacaaaggacaatttgatactattaacacacaaaacagacacattaattacactgacaacatttcttaagaaatgtgaa-aaaacaatgagt 41665697  T
Q  116 g-ctacattaagggacgcagggagtatttg 144  Q
    | ||||||||||||||| || |||||||||    
T  41665696 gcctacattaagggacggagagagtatttg 41665667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 44424680 - 44424555
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||| ||||  ||||||||||| |||||| || |||||| ||    
T  44424680 cacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaatgagt 44424581  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| ||||||||    
T  44424580 gcctacattaagggacggagggagta 44424555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 28733908 - 28733785
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||||||||| |||||| |  ||||||||||||||||||||| |||||| |||||||| || |||||| |||  |||||||    
T  28733908 cacatacaaacaaatgacaatttggtaatattaacata--aaacagacacattaattacaccgacaatttttcttaaaaaatgtgaaaaagaaaatgggt 28733811  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| ||||||||    
T  28733810 gcctacattaagggacgaagggagta 28733785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 44421534 - 44421408
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||| || | || |||     
T  44421534 cacatacaaacaaatgacaatttagtaatattaacaaacaaaacagatacattaattacactgacaatttttcttaagaaatgtgaaaaaagtaaaggga 44421435  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    |  |||||||||||||| |||||||||    
T  44421434 gtttacattaagggacggagggagtat 44421408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 27297662 - 27297534
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||| || |||| |||     
T  27297662 cacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattacactaacagtttttcttaagaaatgtgaaaaaagcaaagggg 27297563  T
Q  116 g-ctacattaagggacgcagggagtattt 143  Q
    |  |||||||||||||  |||||||||||    
T  27297562 gtttacattaagggacagagggagtattt 27297534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 35178816 - 35178939
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-c 117  Q
    ||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||| |||||||||||  ||||||||||| |||||| ||  ||||||||| |    
T  35178816 atacaaataaaagacaatttcgtaatattatcacacaaaacatacacattaactacactgacaacttttcttaagaaatgtgaaaaaaacaatgggtgcc 35178915  T
Q  118 tacattaagggacgcagggagtat 141  Q
    |||||||||||| | |||||||||    
T  35178916 tacattaagggatgaagggagtat 35178939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 28264972 - 28265057
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||  ||||||||||| ||||||    
T  28264972 acatacaaacaaatgacaatttggtaatattaacgcacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaa 28265057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 13534469 - 13534374
Alignment:
Q  46 ttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctacattaagggacgcagggagtat 141  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||| |||| ||||||||||||||| |||| ||||    
T  13534469 ttaacacacaaaacaaacacattaattacactgacaacatttcttaagaaatgtgaa-aaggcaataggtgcctacattaagggacggagggtgtat 13534374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 45214810 - 45214724
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| | |||||||  ||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  45214810 cacatacaaacaaagggcaatttgaaaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaa 45214724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 15851616 - 15851491
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||| ||||||| ||||||||  |||| |||||||| ||||||||||||||||||||||| ||||  ||||||||||| |||||| ||| |||| | |    
T  15851616 cacatataaacaaaggacaatttcataatattaacacaaaaaacagacacattaattacactcacaacttttcttaagaaatgtgaaaaagacaatagat 15851517  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||  ||||||||    
T  15851516 gtctacattaagggacagagggagta 15851491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 17250981 - 17251106
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||| ||||  |||||||| || |||||| ||| |||| | |    
T  17250981 cacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacattaattatactaacaacttttcttaaaaaatgtgaaaaagacaatagat 17251080  T
Q  116 -gctacattaagggacgcagggagta 140  Q
      |||||||||| |||| ||||||||    
T  17251081 acctacattaagagacggagggagta 17251106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 14420762 - 14420683
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||| ||||    
T  14420762 cacatgcaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactaacaacttttctttagaa 14420683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 35241730 - 35241829
Alignment:
Q  18 catacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtgc 117  Q
    |||||||||||| || |||||| |||| |||||| |||||||||||||||||||||||| ||||| |||||||| ||| ||| || ||||||||| ||||    
T  35241730 catacaaacaaatgataatttgataatattaacaaacaaaacagacacattaattacacagacaacatttcttatgaaatgtaaaaaaggcaatgtgtgc 35241829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 37355121 - 37355030
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaagg 107  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||  ||||  ||||||||||| |||||| ||||    
T  37355121 cacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacacaaacaacttttcttaagaaatgtgaaaaagg 37355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 43650119 - 43650040
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||  ||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||    
T  43650119 cacatacaaacaaagaacaatttagtaatattaacatacaaaacagacacattaattacactgacaatttttctaaagaa 43650040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20362068 - 20361982
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||| |||||| ||||| ||||||||||| ||||||    
T  20362068 cacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaatttttcttaagaaatgtgaa 20361982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 24774950 - 24774864
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||| | ||  |||||||| || ||||||    
T  24774950 cacatacaaacaaaagacaatttggtaatattaacacacaaaatagatacattaattacactaataaattttcttaaaaaatgtgaa 24774864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 44274687 - 44274773
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||| ||||||  |||||||| || ||||||    
T  44274687 cacatacaaacaaatgacaatttggcaatattaacacataaaacagacacattaattacattgacaacttttcttaaaaaatgtgaa 44274773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 31644462 - 31644578
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| ||||| ||  |||||||  || |||||| ||| |||||| |    
T  31644462 cacatacaaacaaatgacaattttgtaatattaacacaaaaaacagacacattaattaaactgataacttttcttataaaatgtgaaaaagacaatggat 31644561  T
Q  116 g-ctacattaagggacg 131  Q
    | ||||||||| |||||    
T  31644562 gcctacattaaaggacg 31644578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 4398545 - 4398620
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  4398545 acatacaaacaaatgacaatttcgtaatattaacacacaaaatagacacattaattacactaacaacttttcttaa 4398620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 11459235 - 11459152
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||| |||||  |||| |||||| ||||||    
T  11459235 atacaaacaaaggacaatttagtaatattaacacacaaaacagacacattatttacaccgacaacttttcataagaaatgtgaa 11459152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 3237808 - 3237679
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaata--tttcttaagaattgtgaagaaggcaatgg 113  Q
    |||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||||| | | || |  |||||||| || |||||| |||  ||| |    
T  3237808 cacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattacattaataacacttttcttaaaaaatgtgaaaaagataatag 3237709  T
Q  114 gt-gctacattaagggacgcagggagtatt 142  Q
    ||  ||||||||||||||| ||||||||||    
T  3237708 gtacctacattaagggacggagggagtatt 3237679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 17663709 - 17663623
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| || ||||||||||||||| ||||  ||||||||||| ||||||    
T  17663709 cacatacaaacaaaggacaatttagtaatattaacacataaaataggcacattaattacactaacaacttttcttaagaaatgtgaa 17663623  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 27749580 - 27749470
Alignment:
Q  33 caatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtgctacattaagggacgc 132  Q
    |||||| ||||| |||| |||||||||||||| |||||||||||||||||  ||||||||||| |||||| || | || ||||| |  ||||||||||      
T  27749580 caatttagtaatattaatacacaaaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaaagtaaagggtgttgaattaagggacag 27749481  T
Q  133 agggagtattt 143  Q
    |||||||||||    
T  27749480 agggagtattt 27749470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 41865800 - 41865675
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||  || ||||||||||||||||||||||||| |||||||||||||| ||  ||||  ||||||||||| |||||| || ||||  ||     
T  41865800 cacatacaaacaag-gataatttggtaatgttaacacacaaaatagacacattaattagaccaacaacttttcttaagaaatgtgaaaaaagcaaaaggg 41865702  T
Q  116 gc-tacattaagggacgcagggagtat 141  Q
    || |||||||||||| | |||||||||    
T  41865701 gcttacattaagggaaggagggagtat 41865675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 34330087 - 34329990
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgg 113  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||  |||||||||| ||| ||||  ||| ||||||| |||||| ||| ||||||    
T  34330087 cacatacaaacaaaggacaattttgtaatattaacacacaaaacaggtacattaattatactaacaactttttttaagaaatgtgaaaaagacaatgg 34329990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 3326809 - 3326687
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||| ||||||| ||||||||  |||| |||| | |||||||||||||||||||||||| |||||| ||| |||| || | |||| ||||||||  ||    
T  3326809 cacatataaacaaaggacaatttaataatattaatatacaaaacagacacattaattacaccgacaattttttttaaaaaatatgaaaaaggcaataagt 3326710  T
Q  116 g-ctacattaagggacgcaggga 137  Q
    | |||||||||| |||| |||||    
T  3326709 gcctacattaagagacggaggga 3326687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 26512156 - 26512070
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| | |||||||||||| ||| ||||| ||| ||||||| ||||||    
T  26512156 cacatacaaacaaaggacaatttagtaatattaacacataaaataaacacattaattatactaacaattttttttaagaaatgtgaa 26512070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 4818848 - 4818729
Alignment:
Q  139 tatttgttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttcta 238  Q
    |||| |||||||||| ||||||||||| |||| |||||||  ||| ||||||||||| |||||||||||||||| ||| | |||| || |||| ||||||    
T  4818848 tattagttaaagtactaaaataagtaactttgaaataaaaa-ttgtgtaattattattaagataaaagtaaaaacttg-aatttccaagcaaaatttcta 4818751  T
Q  239 caaatagattctttaaccaatg 260  Q
    | |||| | || ||||||||||    
T  4818750 ctaataaaatccttaaccaatg 4818729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 14818859 - 14818916
Alignment:
Q  202 aaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaat 259  Q
    ||||||||||||||| ||||||||||| |||||||| | |||||||||||||||||||    
T  14818859 aaaagtaaaaatttgcattttcaaaaccaagtttcttctaatagattctttaaccaat 14818916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 375365 - 375425
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacac 76  Q
    |||||||||||||| ||||||||| ||||  |||||||||||| |||||||||||||||||    
T  375365 cacatacaaacaaatgacaatttgataatactaacacacaaaatagacacattaattacac 375425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 1246433 - 1246529
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatg 112  Q
    ||||||||||||||  |||||||  |||| ||||||||||||||| |||| ||||||| ||||||||  ||| ||||||| |||||| ||| |||||    
T  1246433 cacatacaaacaaagaacaatttcataatattaacacacaaaacaaacacgttaattatactgacaactttttttaagaaatgtgaaaaagacaatg 1246529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 2131839 - 2131763
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||  |||||| |||| ||||  |||||||||||    
T  2131839 atacaaacaaaagataatttggtaatattaacacacaaaatagacatgttaattgcactaacaacttttcttaagaa 2131763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 2396798 - 2396707
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagttt 235  Q
    |||||||||| |||||||||||||||||| ||||| || | ||||| ||| |||||| ||||||||| |||| ||| | ||| |||||||||    
T  2396798 gttaaagtactaaaataagtaattttgtattaaaaagtggtgtaatcattgtcaagaaaaaagtaaagatttatatctccaagacaaagttt 2396707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 4033666 - 4033587
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||  ||||||| ||||| |||||||| |||||||| |||||||||||||| | ||  |||||||||||    
T  4033666 cacatacaaacaaagaacaatttagtaatattaacacagaaaacagaaacattaattacactaataacttttcttaagaa 4033587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 38449734 - 38449793
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    |||||||||||||| || |||||| |||| |||| |||||||||||||||||||||||||    
T  38449734 cacatacaaacaaatgataatttgataatattaatacacaaaacagacacattaattaca 38449793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 38982091 - 38982146
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaat 71  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||    
T  38982091 cacatacaaacaaaaaataatttggtaatattaacacacaaaacagatacattaat 38982146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 43710004 - 43709901
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatattt-cttaagaattgtgaagaaggcaatggg 114  Q
    |||||| ||||||| |||||||  ||||| ||||||||||||| |||| |||||||| |||| ||||| ||| |||||||| |||||| || |||| |||    
T  43710004 cacatataaacaaaggacaattaagtaatattaacacacaaaatagacgcattaattgcactaacaatttttgcttaagaaatgtgaaaaatgcaaaggg 43709905  T
Q  115 tgct 118  Q
    ||||    
T  43709904 tgct 43709901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 7278633 - 7278719
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| | ||||||| |||| |   ||||||||||| ||| |||||||||||||||||| |||||||| || ||||||    
T  7278633 cacatacaaacaaagggcaatttgataatatattcacacaaaacaaacatattaattacactgacaatttttcttaacaaatgtgaa 7278719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 8384001 - 8384071
Alignment:
Q  25 acaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||| |||||||||||||| ||||||||||||| | ||||||||||| |||| || || |||||||||||    
T  8384001 acaaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaactatttttcttaagaa 8384071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 14527707 - 14527641
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaat 83  Q
    ||||||||||||| || |||| |||||| ||||||||||||| ||||||||||||||| || |||||    
T  14527707 acatacaaacaaatgataattcggtaatattaacacacaaaatagacacattaattaccctaacaat 14527641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 247744 - 247679
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||| | ||||||  |||| ||||||||||||| |||||||||||||||||| ||||    
T  247744 acatacaaacaaagggcaattttataatattaacacacaaaatagacacattaattacactaacaa 247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 7255686 - 7255621
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgaca 81  Q
    |||| |||| |||| || ||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  7255686 cacaaacaatcaaaggataatttggtaatattaatacacaaaacagacacattaattacaccgaca 7255621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 21012936 - 21012859
Alignment:
Q  18 catacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||| || |||||| |||| ||||||||||||| | ||||||||||| |||| ||||  |||||||||||    
T  21012936 catacaaacaaaggataatttgataatattaacacacaaaataaacacattaattgcactaacaacttttcttaagaa 21012859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 6275591 - 6275654
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaat 83  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||||||||||||| |||| |||||    
T  6275591 atacaaacaaaagacaatttcataat-ttaacacacaaaatagacacattaattgcactaacaat 6275654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 16209928 - 16209833
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctac 239  Q
    |||||||||| ||||||||||| |||  || |||| |||| |||| ||||   |||| ||||||||| | |||||||| |||||||||||||||||    
T  16209928 gttaaagtactaaaataagtaactttaaaacaaaaagttgtgtaactattgctaagacaaaagtaaacacttgtatttccaaaacaaagtttctac 16209833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 45150756 - 45150843
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaag 103  Q
    |||||||||||||| |||||||  ||||| |||||||||||||   ||||||||||| |||  ||||  ||||||||||| |||||||    
T  45150756 cacatacaaacaaaggacaattgagtaatattaacacacaaaatgaacacattaattgcacaaacaacttttcttaagaaatgtgaag 45150843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 29660435 - 29660509
Alignment:
Q  185 gtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaat 259  Q
    ||||||||| |||||| ||||||||||| || || || || |||||||||| ||  |||||||||||||||||||    
T  29660435 gtaattattgtcaagacaaaagtaaaaacttataattccagaacaaagtttttattaatagattctttaaccaat 29660509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 40346101 - 40346187
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| |||||||||||| ||||| |||||||||||||   ||||||||||| |||  ||||  |||||||| || ||||||    
T  40346101 cacatacaaataaaagacaatttagtaatattaacacacaaaatgaacacattaattgcacaaacaacttttcttaaaaaatgtgaa 40346187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 2521320 - 2521381
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    |||||||||||||||||||||||  |||| ||| |||| |||| ||||||||||| ||||||    
T  2521320 cacatacaaacaaaagacaatttaataatattaccacataaaatagacacattaactacact 2521381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 3645403 - 3645322
Alignment:
Q  21 acaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||| || |||||||| ||||| |||| |||||||| ||||||||||| || ||| ||||  ||||||||||| ||||||    
T  3645403 acaaacgaaggacaatttagtaatattaatacacaaaatagacacattaagtaaactaacaacttttcttaagaaatgtgaa 3645322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 11071753 - 11071676
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaag 93  Q
    ||||||||| |||| |||||||| ||||| |||||||| |||  ||||||||||||| |||| ||||  |||||||||    
T  11071753 cacatacaagcaaaggacaatttagtaatattaacacataaattagacacattaattgcactaacaacttttcttaag 11071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 25731207 - 25731263
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatta 73  Q
    |||||||||||||||| |||||| |||| |||||||||||| || ||| ||||||||    
T  25731207 acatacaaacaaaagataatttgataatattaacacacaaaccaaacatattaatta 25731263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 2917121 - 2917201
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtg 100  Q
    |||||||||||||||||||||||  ||||    ||| |||||| |||||||||||||| ||| ||||  ||||||||||| ||||    
T  2917121 cacatacaaacaaaagacaatttattaat----acatacaaaatagacacattaattatactaacaacttttcttaagaaatgtg 2917201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 6597921 - 6597882
Alignment:
Q  36 tttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  6597921 tttggtaatgttaacacacaaaatagacatattaattaca 6597882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 8393293 - 8393234
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||||||||  | |||||| |||| ||||||||||||||| ||||||||| ||||    
T  8393293 cacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactaca 8393234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 8667724 - 8667637
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaac-acacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || |||||| |||| ||||  | |||||||||||| |||||||| ||||||||  ||||||| ||| ||||||    
T  8667724 cacatacaaacaaaggagaatttgataatattaaagatacaaaacagacatattaattagactgacaacttttcttaggaaatgtgaa 8667637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 28190680 - 28190617
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||| |||||||||||||| |||||||| |||| | ||| |||||||| ||| ||||    
T  28190680 atacaaacaaatgacaatttggtaatattaacacaaaaaataaacatattaattatactaacaa 28190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 29971354 - 29971296
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacac 76  Q
    |||||||||||||| | ||||| ||||| |||||| ||||||||||| ||||||||||||    
T  29971354 acatacaaacaaaaaaaaatttagtaattttaacatacaaaacagac-cattaattacac 29971296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 36846840 - 36846781
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||||||||  | |||||| |||| ||||||||||||||| ||||||||| ||||    
T  36846840 cacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactaca 36846781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 44462601 - 44462660
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattaca 75  Q
    ||||||||||||||  | |||||| |||| ||||||||||||||| ||||||||| ||||    
T  44462601 cacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactaca 44462660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 2048850 - 2048934
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || ||||||||| |||||||||| |||| ||| |||||| ||||||  ||||  ||||||||||| ||||||    
T  2048850 cacatacaaacaaa-gataatttggta-tgttaacacataaaatagagacattatttacaccaacaacttttcttaagaaatgtgaa 2048934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 4758111 - 4758054
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatta 73  Q
    |||||| ||||||| ||||||||  |||| ||||||||||||| | ||||||||||||    
T  4758111 cacataaaaacaaaggacaatttcataatattaacacacaaaataaacacattaatta 4758054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 281
Target Start/End: Original strand, 8793863 - 8793948
Alignment:
Q  196 caagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgccattagaacactagttagca 281  Q
    ||||| |||| |||||| || ||||| ||| ||||||||||||  | ||||||| |||||||||||| ||||  |||| |||||||    
T  8793863 caagacaaaaataaaaacttatatttccaagacaaagtttctattagtagattccttaaccaatgcccttagggcactggttagca 8793948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 20426995 - 20426950
Alignment:
Q  47 taacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  20426995 taacacacaaaatagacacattaatttcactaacaatttttcttaa 20426950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 30554591 - 30554672
Alignment:
Q  197 aagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgccattagaacactagtta 278  Q
    |||| |||||||||||| || |||||||| ||| | ||||||| ||||||||| || | ||||| | |||||||||| ||||    
T  30554591 aagacaaaagtaaaaatgtgcattttcaagacataatttctactaatagattccttcatcaatgtccttagaacactcgtta 30554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 16808844 - 16808904
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    ||||||||||||| |||||||| ||||| |||| ||| |||| | ||||||||||| ||||    
T  16808844 acatacaaacaaatgacaatttagtaatattaatacataaaatatacacattaattgcact 16808904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 16848125 - 16848185
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    ||||||||||||| |||||||| ||||| |||| ||| |||| | ||||||||||| ||||    
T  16848125 acatacaaacaaatgacaatttagtaatattaatacataaaatatacacattaattgcact 16848185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 23464765 - 23464705
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactga 79  Q
    ||||||| ||| ||||||||| |||| || || ||||||| |||||||||||||| |||||    
T  23464765 atacaaataaaggacaatttgataatatttacgcacaaaatagacacattaattatactga 23464705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 32677556 - 32677476
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtg 100  Q
    |||||||||| |||||||||  ||| ||||| || |||| |||||||||||||  | | ||||| ||||||||||| ||||    
T  32677556 tacaaacaaatgacaatttgaaaatattaacccataaaatagacacattaattgtattaacaatttttcttaagaaatgtg 32677476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 35453754 - 35453814
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    ||||| |||||||  ||||||| ||||| |||||| | |||| ||||||||||||||||||    
T  35453754 acataaaaacaaagaacaatttagtaatattaacatataaaatagacacattaattacact 35453814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 37673822 - 37673707
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||| ||||||||    
T  37673822 cacatacaaacaaaagacaatttcataatattaacacacaaaacagacacattaattacactcacaacatttcttaagaaatgtgaaaaagacaatgggt 37673723  T
Q  116 g-ctacattaagggac 130  Q
    | ||||||||||||||    
T  37673722 gtctacattaagggac 37673707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 4089523 - 4089646
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-c 117  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||| |||||| || |    
T  4089523 atacaaacaaaagataatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagtcaatggatgcc 4089622  T
Q  118 tacattaagggacgcagggagtat 141  Q
    |||||||||||| | |||||||||    
T  4089623 tacattaagggaaggagggagtat 4089646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 48767642 - 48767524
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctaca 121  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||| || |||||||||| |||||    
T  48767642 aaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacgttttttaagaaatgtgaaaaaagcaatgggtgcctaca 48767543  T
Q  122 ttaagggacgcagggagta 140  Q
    |||||||||| ||||||||    
T  48767542 ttaagggacgtagggagta 48767524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 1324793 - 1324668
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||| ||    
T  1324793 cacatacaaacaaatgacaatttgataagattaacacacaaaacagacacattaattacactgataacatttcttaagaaatgtgaaaaaggcaatgagt 1324694  T
Q  116 -gctacattaagggacgcagggagta 140  Q
     | |||||||||||||  ||||||||    
T  1324693 ggatacattaagggacagagggagta 1324668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 36116406 - 36116280
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||||||||| |||||| ||| |||||  |    
T  36116406 cacatacaaacaaatgacaatttcgtaatattaacacataaaacagacacattaattacaccgacaacatttcttaagaaatgtgaaaaagacaatgaat 36116307  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||||||||| || ||||||    
T  36116306 gcctacattaagggacggagagagtat 36116280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 49100756 - 49100629
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||  | | ||||||  || ||| ||||||||||||    
T  49100756 cacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacactgacaacttattttaagagatgcgaaaaaggcaatgggt 49100657  T
Q  116 -gctacattaagggacgcagggagtatt 142  Q
     |||||||||||||||  ||||||||||    
T  49100656 ggctacattaagggacagagggagtatt 49100629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20123535 - 20123449
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  20123535 cacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaa 20123449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 36726200 - 36726321
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctaca 121  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||| || ||||||||  || ||| |||||||||| || |||||    
T  36726200 aaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactaacaacatctcttaagagatgcgaaaaaggcaatggatgcctaca 36726299  T
Q  122 ttaagggacgcagggagtattt 143  Q
    |||||||||| ||| |||||||    
T  36726300 ttaagggacggaggaagtattt 36726321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 6376153 - 6376239
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  6376153 cacatacaaacaaatgacaatttagtaatattaacacacaaaacagagacattaattacactaacaatttttcttaagaaatgtgaa 6376239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 21388327 - 21388241
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  21388327 cacatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattaattacaccgacaaattttcttaagaaatgtgaa 21388241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 25750453 - 25750367
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||    
T  25750453 cacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacattaattacactgacaactttttttaagaaatgtgaa 25750367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 48610156 - 48610270
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||  |||||||| || |||||| || ||||| | |    
T  48610156 cacatacaaacaaaagacaatttcgtaatattaatacacaaaacagacacattaattacagtgacaacttttcttaaaaaatgtgaaaaatgcaatagat 48610255  T
Q  116 -gctacattaaggga 129  Q
     ||||||||||||||    
T  48610256 agctacattaaggga 48610270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 2276597 - 2276683
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||  ||| ||||||| ||||||    
T  2276597 cacatacaaacaaaggacaatttggtaatattaacacacaaaacagacaaattaactacactgacaacttttgttaagaaatgtgaa 2276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 37048120 - 37048034
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||    
T  37048120 cacatacaaacaaaggacaatttgggaacattaacacacaaaacagacacattaattacactgataacttttcttaagaaatgtgaa 37048034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 40211297 - 40211399
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||  ||||| |||||||| || | |||| ||| ||||||||    
T  40211297 cacatacaaataaatgacaatttcgtaatattaacacacaaaacagacacattaattacacaaacaatttttcttaaaaaatatgaaaaagacaatgggt 40211396  T
Q  116 gct 118  Q
    |||    
T  40211397 gct 40211399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 35128469 - 35128355
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||||| |||||||||||||||||  |||||||  || |||||| ||| |||| |||    
T  35128469 cacatacaaacaaaggacaatttcataatattaacacacaaaacagacatattaattacactgacaacttttctta--aaatgtgaaaaagacaataggt 35128372  T
Q  116 gc-tacattaagggacg 131  Q
    || ||||||||||||||    
T  35128371 gcttacattaagggacg 35128355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 43465163 - 43465239
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    ||||||||||||||||||||||||  |||  |||||||||||||||||||||||||||||||||||| | |||||||    
T  43465163 cacatacaaacaaaagacaatttgaaaatactaacacacaaaacagacacattaattacactgacaacacttcttaa 43465239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 10685170 - 10685091
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| ||  |||||||||||    
T  10685170 cacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacactgataacttttcttaagaa 10685091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 21801076 - 21801162
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||  |||||  ||||||||||| ||||||    
T  21801076 cacatacaaataaatgacaatttagtaatattaacacacaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaa 21801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 21809667 - 21809753
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||  |||||  ||||||||||| ||||||    
T  21809667 cacatacaaacaaaggacaatttagtaatattaacacaaaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaa 21809753  T

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Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 31373718 - 31373804
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||||| | || ||||| ||||||||||| ||||||    
T  31373718 cacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaattgccctaacaatttttcttaagaaatgtgaa 31373804  T

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Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 10595119 - 10595203
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||| ||| |||||  |||||||||||||||||| |||||||| ||||||||  ||||||||||| ||||||    
T  10595119 cacatacaaacaaaagacagtttcgtaat--taacacacaaaacagacatattaattatactgacaacttttcttaagaaatgtgaa 10595203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 33181380 - 33181301
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||||||||| |||| | |||||||| ||||||||| ||||||||||| |||| |||||||    
T  33181380 cacatacaaacaaatgacaatttggtaatattaatatacaaaacaaacacattaactacactgacaacattttttaagaa 33181301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 48193693 - 48193614
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||| || ||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||| || ||||||    
T  48193693 aaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaatttttcttaaaaaatgtgaa 48193614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 26632931 - 26632845
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||| ||||| ||||| |||||||| |||| ||||||||||| |||||| ||||| |||||||| || ||||||    
T  26632931 cacatacaaacaaaagataatttagtaatattaacacataaaatagacacattaactacactaacaatttttcttaaaaaatgtgaa 26632845  T

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Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 40263796 - 40263710
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| ||||||  ||||||||||||||||||||||| |||||  |||||||| || ||||||    
T  40263796 cacatacaaacaaatgacaattttgtaatattaacaatcaaaacagacacattaattacaccgacaacttttcttaaaaaatgtgaa 40263710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 18122062 - 18122159
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgg 113  Q
    ||||| |||||||| || ||||| ||||| |||||||| |||||||||||| |||||||||| ||||  ||||||||||| |||||| ||| ||||||    
T  18122062 cacattcaaacaaaggaaaatttagtaatattaacacataaaacagacacactaattacactcacaacttttcttaagaaatgtgaaaaagacaatgg 18122159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 5334415 - 5334491
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||| || | ||||||||| |||||| |||||||| |||||||||||||||| ||||| ||||||||    
T  5334415 cacatacaaacaaatgatagtttggtaatattaacatacaaaacaaacacattaattacactaacaatttttcttaa 5334491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 29636072 - 29636136
Alignment:
Q  28 aaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||  ||||||||    
T  29636072 aaaggcaatttggtaatattaacacacaaaacagacacattaattacattgacaacttttcttaa 29636136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 19236087 - 19236173
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||  ||||| ||||||| |||||| ||||||| ||||||||||||||||| ||||  ||||||| ||| ||||||    
T  19236087 cacatacaaacaaagaacaatatggtaatattaacatacaaaaccgacacattaattacactaacaacttttcttacgaaatgtgaa 19236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 46783861 - 46783947
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||| ||||||||||||||||||||| |||||||| || | ||||||||||||| |||| | ||  ||||||||||| ||||||    
T  46783861 cacatacgaacaaaagacaatttggtaatattaacacataagatagacacattaatttcactaataacttttcttaagaaatgtgaa 46783947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 27213571 - 27213486
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| ||||| |||| || |||| ||||  ||||||||||| ||||||    
T  27213571 acatacaaacaaaggacaatttagtaatattaacacacaaaatagacatattagttgcactaacaacttttcttaagaaatgtgaa 27213486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 37491642 - 37491725
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||| || ||||||||||| |||||| | |||| ||||||||||||| |||| ||||  ||||||||||| ||||||    
T  37491642 atacaaacaaaggataatttggtaatattaacatataaaatagacacattaattgcactaacaacttttcttaagaaatgtgaa 37491725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 40741032 - 40740949
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||| ||| || ||||||||||| ||||||||||||| ||||| |||||||||| | ||||  ||||||||||| ||||||    
T  40741032 atacaaagaaatgataatttggtaatattaacacacaaaatagacatattaattacattaacaacttttcttaagaaatgtgaa 40740949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 21392913 - 21392979
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||| ||||||||||||| |||| ||||    
T  21392913 cacatacaaacaaaatataatttggtaatattaacactcaaaatagacacattaattgcactaacaa 21392979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 23876122 - 23876036
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||  |||| ||||| |||||| ||||  ||| ||||||| ||||||    
T  23876122 cacatacaaacaaaagacaatttagtaatattaacacataaaatggacatattaactacactaacaactttttttaagaaatgtgaa 23876036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 45411266 - 45411379
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaat 243  Q
    |||||||||| ||||||||||| ||| ||| |||| |||  ||||||||| |  ||||||||||||||| ||| ||||  |||||| | |||||| ||||    
T  45411266 gttaaagtactaaaataagtaactttataacaaaaagttatgtaattattgttgagataaaagtaaaaacttgcatttctaaaacataatttctataaat 45411365  T
Q  244 agattctttaacca 257  Q
      ||||||||||||    
T  45411366 gaattctttaacca 45411379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 29723540 - 29723421
Alignment:
Q  22 caaacaaaagacaatttggtaatgttaacacacaaaa-cagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtgc-ta 119  Q
    |||||||| ||  |||| ||||| ||| ||||||||| ||| ||||||||||||| ||||||  ||||| || ||| ||||| ||| |||||||||| ||    
T  29723540 caaacaaatgattatttcgtaatattaccacacaaaaacaggcacattaattacaatgacaaattttctaaaaaat-gtgaaaaagacaatgggtgccta 29723442  T
Q  120 cattaagggacgcagggagta 140  Q
    |||||||||||| ||||||||    
T  29723441 cattaagggacggagggagta 29723421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 29993055 - 29992981
Alignment:
Q  21 acaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||| || ||||||||| | |||||| |||||| ||||||||||||| |||| ||||  |||||||||||    
T  29993055 acaaacaaatgataatttggtagtattaacatacaaaatagacacattaattgcactaacaacttttcttaagaa 29992981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 35960463 - 35960337
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||||| ||||| ||||| | || ||| |||| |||||||||||||  ||| ||||| ||| ||||| | |||||| ||  |||||| |    
T  35960463 cacatacaaacaaaagataatttagtaatataaatacataaaatagacacattaattgtactaacaattttttttaaggaatgtgaaaaatacaatggat 35960364  T
Q  116 gc-tacattaagggacgcagggagtat 141  Q
    || |||||| ||||||| || ||||||    
T  35960363 gcttacattcagggacggagcgagtat 35960337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 142
Target Start/End: Complemental strand, 20124255 - 20124146
Alignment:
Q  34 aatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtgc-tacattaagggacgc 132  Q
    ||||| ||||||| || ||| |||| |||||||||||||||||  ||||  |||||||| || |||||| || ||||  || || ||||||||||||||     
T  20124255 aatttagtaatgtcaatacataaaatagacacattaattacaccaacaacttttcttaaaaaatgtgaaaaaagcaaaaggggcttacattaagggacgg 20124156  T
Q  133 agggagtatt 142  Q
    ||||||||||    
T  20124155 agggagtatt 20124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 21752613 - 21752529
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtg 100  Q
    |||||||||||||| || ||||||||||| ||||| ||||||| | ||| ||||||| |||| ||||  ||| ||||||| ||||    
T  21752613 cacatacaaacaaatgataatttggtaatattaacccacaaaataaacaaattaattgcactaacaactttttttaagaaatgtg 21752529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 21946149 - 21946288
Alignment:
Q  136 gagtatttgttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagttt 235  Q
    ||||||| |||||| ||| ||||||||||| |||| ||||||| |||| ||||||||||         ||||||||||||||||||  || | |||  ||    
T  21946149 gagtattggttaaaatactaaaataagtaactttgcaataaaaagttgtgtaattatta-------ctaagtaaaaatttgtatttctaagataaaactt 21946241  T
Q  236 ctacaaatagattctttaaccaatgccattagaacactagttagcac 282  Q
    |||| |||  ||||||||| || |||| ||||||||||| |||||||    
T  21946242 ctactaatgaattctttaatcattgcccttagaacactatttagcac 21946288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 42983634 - 42983694
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacac 76  Q
    |||||||||||| ||||||||||  |||| |||||| | |||| |||||||||||||||||    
T  42983634 cacatacaaacataagacaatttaataatattaacatataaaagagacacattaattacac 42983694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 23705055 - 23705134
Alignment:
Q  202 aaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgccattagaacactagttagca 281  Q
    |||||||||||  || |||| ||| ||||| |||| || |||||||||||||||||||||| |||| | ||| |||||||    
T  23705055 aaaagtaaaaacatgcatttccaagacaaaatttcaactaatagattctttaaccaatgcctttaggatacttgttagca 23705134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 27162924 - 27163008
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||| ||| |||| |||||||  | ||||||||||| |||| ||||  || |||||||| ||||||    
T  27162924 cacatacaaacaaatgacaatttggcaatattaaaacacaaa--atacacattaattgcactaacaactttacttaagaaatgtgaa 27163008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 28663839 - 28663784
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||||||||||||  | |||||| |||| ||||||||||||| |||||||||||||    
T  28663839 acatacaaacaaataataatttgataatattaacacacaaaatagacacattaatt 28663784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 41672591 - 41672662
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttctta 91  Q
    |||||||||| || ||||| || || || |||||||||| |||||||||||||||||| ||||  |||||||    
T  41672591 tacaaacaaaggataatttagttatattcacacacaaaatagacacattaattacactaacaagttttctta 41672662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 39026862 - 39026900
Alignment:
Q  200 ataaaagtaaaaatttgtattttcaaaacaaagtttcta 238  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  39026862 ataaaagtaaaaattcgtattttcaaaataaagtttcta 39026900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 40024286 - 40024204
Alignment:
Q  147 aaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaaca 229  Q
    ||||||| || |||||||| |||| ||||||| |||| |||||||||   || ||||||||||||| ||| |||| |||||||    
T  40024286 aaagtactaacataagtaactttgcaataaaaagttgtgtaattattgctaaaataaaagtaaaaacttgcatttgcaaaaca 40024204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 43601185 - 43601273
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaa 105  Q
    |||||| ||||||| |||||||| |||||  | ||| ||||||||||||| | ||||||| | ||||  ||||||||||| |||||||||    
T  43601185 cacatataaacaaaggacaattttgtaatacttaca-acaaaacagacacctcaattacattaacaacttttcttaagaaatgtgaagaa 43601273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 16070509 - 16070391
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ctaca 121  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| ||| |||| |||| |||||    
T  16070509 aaacaaaagataatttggtaatattaacacacaaaacagacacattaattacactgacagcatttcttaagaaatgtgaaaaagacaataggtgcctaca 16070410  T
Q  122 ttaagggacgcagggagta 140  Q
    |||||||||| ||||||||    
T  16070409 ttaagggacggagggagta 16070391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 20262414 - 20262539
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||||| ||    
T  20262414 cacatacaaacaaataacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaatgagt 20262513  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||| ||||||||||  ||||||||    
T  20262514 gtctatattaagggacagagggagta 20262539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 25477310 - 25477185
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||| || ||||||| |    
T  25477310 cacatacaaacaaatgacaattttgtaatattaacacataaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaatggat 25477211  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||  ||||||||    
T  25477210 gcctacattaagggacatagggagta 25477185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 5448747 - 5448622
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||| | ||| || |||||||||||| |||||| |||||||||| |    
T  5448747 cacatacaaacaaaggataatttcgtaatattaacacacaaaacagacacattaattatattgataacatttcttaagaaatgtgaaaaaggcaatggat 5448648  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| || |||||    
T  5448647 gcctacattaagggacggagcgagta 5448622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 29584979 - 29584877
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||| ||||| ||||||||||| |||||| || |||| ||||    
T  29584979 cacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacactaacaatttttcttaagaaatgtgaaaaatgcaaagggt 29584880  T
Q  116 gct 118  Q
    |||    
T  29584879 gct 29584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 5536582 - 5536481
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| || ||||| ||| | ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||    
T  5536582 cacatacaaacaaatgaaaatttcgtagtattaacacgcaaaacagacacattaattacactgacaatttttcttaagaaatgtgaaaaaggctatgggt 5536483  T
Q  116 gc 117  Q
    ||    
T  5536482 gc 5536481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 39237609 - 39237738
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||  |||||||| || |||||| ||| |||||| |    
T  39237609 cacatacaaacaaaggacaatttcgtaatattaacacacaaaacagatacattaattacactgacaacttttcttaaaaaatgtgaaaaagacaatggat 39237708  T
Q  116 g-----ctacattaagggacgcagggagta 140  Q
    |     ||||||||||||||| ||||||||    
T  39237709 gcgtgcctacattaagggacggagggagta 39237738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 50782863 - 50782747
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||| |||||| |||  | |||||    
T  50782863 cacatacaaacaaaggacaatttcgtaatattaagacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagatattgggt 50782764  T
Q  116 g-ctacattaagggacg 131  Q
    | ||| |||||||||||    
T  50782763 gcctatattaagggacg 50782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 46729390 - 46729265
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||| || |||||| ||| |||||  |    
T  46729390 cacatacaaacataggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaa-aaatgtgaaaaagacaatgaat 46729292  T
Q  116 g-ctacattaagggacgcagggagtat 141  Q
    | ||||||||||||||| ||| |||||    
T  46729291 gtctacattaagggacgaaggaagtat 46729265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 22750862 - 22750987
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatg-gg 114  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||| |||||  ||||||||||| |||||| || |||| | ||    
T  22750862 cacatacaaacaaatgacaatttggtaatattaatacacaaaacagatacattaattacacagacaacttttcttaagaaatgtgaaaaatgcaaagagg 22750961  T
Q  115 tgctacattaagggacgcagggagta 140  Q
       |||||||||||||| ||||||||    
T  22750962 gattacattaagggacggagggagta 22750987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 51787856 - 51787731
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| | | |||| ||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||| |||||| || | |||| ||    
T  51787856 cacatacaaacaaatgtctatttcgtaatattaacacacaaaacagacacattaattacaccgacaacttttcttaagaaatgtgaaaaatggaatgagt 51787757  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||| ||| ||||||||    
T  51787756 gcctacattaaggaacggagggagta 51787731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30153242 - 30153328
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| ||| || ||||||||||| ||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  30153242 cacatacaaataaaggataatttggtaatattatcacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaa 30153328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 37175042 - 37175127
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  ||||  ||||||||||| ||||||    
T  37175042 cacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattacac-aacaacttttcttaagaaatgtgaa 37175127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 38136440 - 38136354
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||| ||||  ||||||||||| ||||||    
T  38136440 cacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaa 38136354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 52226104 - 52225979
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||| ||||||| ||||||||| |||| |||||| | ||||||||||||||||||| |||||||| ||||||||| || |||||| ||| |||| |||    
T  52226104 cacatataaacaaaggacaatttgataatattaacatataaaacagacacattaattatactgacaacatttcttaaaaaatgtgaaaaagacaataggt 52226005  T
Q  116 -gctacattaagggacgcagggagta 140  Q
      ||||||||| ||||| ||||||||    
T  52226004 acctacattaaaggacggagggagta 52225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 43800893 - 43800758
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatta----------cactgacaatatttcttaagaattgtgaagaa 105  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||          |||||| || ||||||||| || |||||| ||    
T  43800893 cacatacaaacaaaggacaatttggtaatattaacacacaaaacagacaccttaattacacttaattacactgagaacatttcttaacaaatgtgaaaaa 43800794  T
Q  106 ggcaatgggtg-ctacattaagggacgcagggagta 140  Q
    ||||||||||| |||| |||||||||| ||||||||    
T  43800793 ggcaatgggtgcctacgttaagggacggagggagta 43800758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 41920057 - 41920144
Alignment:
Q  15 tcacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||| |||| ||||  ||||||||||| ||||||    
T  41920057 tcacatacaaacaaaagacaatttggtaatattaacacacaaaatagaaatattaattgcactaacaacttttcttaagaaatgtgaa 41920144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 14602675 - 14602761
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||||||| |||||||| |||  |||||||||||||||||| ||||  ||||||||||| ||||||    
T  14602675 cacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaa 14602761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 34543787 - 34543701
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| ||||||||||||||||| |||||  ||||||||||| ||||||    
T  34543787 cacatacaaacaaaggattatttggtaatattaacacacaaaatagacacattaattacacggacaacttttcttaagaaatgtgaa 34543701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 43509166 - 43509082
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||  ||||||||||| ||||||    
T  43509166 cacatacaaacaaaagacaatttgataatattaacacacaaaaca-acacattaattacac-gacaacgtttcttaagaaatgtgaa 43509082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 52198748 - 52198834
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| |||||| ||||||||||| |||| ||||| |||||||| |||||||||||||||||  ||||||||||| ||||||    
T  52198748 cacatacaaataaaagataatttggtaatattaatacacagaacagacatattaattacactgacaacttttcttaagaaatgtgaa 52198834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 54438595 - 54438481
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||| ||| || ||||| ||||| |||||||||||||||||||| ||||||| || |||||| ||||||||||| |||||| ||| |||||| |    
T  54438595 cacatacaaataaaggataatttcgtaatattaacacacaaaacagacactttaattatacggacaatttttcttaagaaatgtgaaaaagacaatggat 54438496  T
Q  116 -gctacattaaggga 129  Q
      |||||||||||||    
T  54438495 acctacattaaggga 54438481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 56373364 - 56373450
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||| ||||||||| |||||||||||||| ||||||||||||| | ||||||||||| |||| ||||| ||||||||||| ||||||    
T  56373364 cacagacaaacaaatgacaatttggtaatattaacacacaaaataaacacattaattgcactaacaatttttcttaagaaatgtgaa 56373450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 5932971 - 5932895
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||| ||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||||  ||||||||    
T  5932971 cacataaaaacaaatgacaatttgataatattaacacacaaaacaaacacattaattacactgacaacttttcttaa 5932895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 13096562 - 13096638
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| ||||  ||||||||    
T  13096562 cacatagaaacaaatgacaatttggtaatattaacacacaacacagacacattaattacactaacaacttttcttaa 13096638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 39197054 - 39197134
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaac-agacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| | | ||||||| |||||||||||    
T  39197054 cacatacaaacaaaagacaatttgataatattaacacacaaaacaagacacattaatcatagtgacaatttttcttaagaa 39197134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 48472515 - 48472631
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttctt-aagaattgtgaagaaggcaatggg 114  Q
    |||||||||| ||| || ||||| ||||| ||||||||||||| |||||||||||||||||||||||  |||||| || || |||||| ||| ||||||     
T  48472515 cacatacaaagaaaggataatttcgtaatattaacacacaaaatagacacattaattacactgacaacttttcttaaaaaaatgtgaaaaagacaatgga 48472614  T
Q  115 tg-ctacattaagggac 130  Q
    || ||||||||||||||    
T  48472615 tgcctacattaagggac 48472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 20185679 - 20185762
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||| |||||||||||| ||||||||||||||   ||||||||||||||| ||||  ||||||||||| ||||||    
T  20185679 atacaaacaaaaggcaatttggtaatattaacacacaaaacttgcacattaattacactaacaaattttcttaagaaatgtgaa 20185762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 32236916 - 32236801
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||| |||||||  | |||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||| || || | |||| || |||||||||    
T  32236916 cacatataaacaaagaataatttgataatattaacacacaaaacagacatattaattacactgacaacatttctaaaaaaatatgaataaagcaatgggt 32236817  T
Q  116 -gctacattaagggac 130  Q
     |||| ||||||||||    
T  32236816 ggctatattaagggac 32236801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 12624781 - 12624695
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| || ||||||||||||||| ||||  ||||||||||| ||||||    
T  12624781 cacatacaaacaaaggacaatttagtaatattaacacataaaatagtcacattaattacactaacaacttttcttaagaaatgtgaa 12624695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 22651549 - 22651463
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||||||||||||||||| |||||| |||||| | |||||||||||||| | | ||  ||||||||||| ||||||    
T  22651549 cacatacaaacaaaagacaatttggtaatattaacatacaaaataaacacattaattacattaataaattttcttaagaaatgtgaa 22651463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 24072852 - 24072751
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    ||||| ||| |||| ||||||||  |||| |||||||| ||||||||||||||||||||| ||||||  ||||||||||| ||| || ||| ||||||||    
T  24072852 cacattcaagcaaatgacaatttcataatattaacacaaaaaacagacacattaattacattgacaacttttcttaagaaatgtaaaaaagacaatgggt 24072753  T
Q  116 gc 117  Q
    ||    
T  24072752 gc 24072751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 31937413 - 31937478
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||||| ||||||||  |||| |||||||||||||||||||||||||||||| ||||||    
T  31937413 acatacaaacaaatgacaatttaataatattaacacacaaaacagacacattaattacagtgacaa 31937478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 52552535 - 52552656
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg-ct 118  Q
    |||||||||| || ||||||||||| |||||||| ||| |||||| ||| |||||||||||||  |||||||| ||  ||||| | |||| |||||| ||    
T  52552535 tacaaacaaaggataatttggtaatattaacacataaagcagacaaatttattacactgacaacttttcttaaaaaacgtgaaaagggcattgggtgcct 52552634  T
Q  119 acattaagggacgcagggagta 140  Q
    ||||||||||||| | ||||||    
T  52552635 acattaagggacggatggagta 52552656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 31840181 - 31840104
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||||||||| ||||||||||||  | | |||||||||||||| ||||| |||||||||||    
T  31840181 cacatacaaacaaatgacaatttggtaatattaacacacaaa--aaatacattaattacactaacaatttttcttaagaa 31840104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 3094263 - 3094188
Alignment:
Q  20 tacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||  | ||||  |||||||||||    
T  3094263 tacaaacaaatgacaatttggtaatattaacacacaaaatagacacattaattactttaacaacttttcttaagaa 3094188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 41945796 - 41945878
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||| |||||||| ||||| ||| |||| |||||| |||||||||||||||||||||| |||||||| || ||||||    
T  41945796 atacaaacaaaggacaatttcgtaatattatcacataaaaca-acacattaattacactgacaatttttcttaaaaaatgtgaa 41945878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 19654513 - 19654427
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| ||| || ||||||||||| | |||||| |||| |||||||||||||||||| ||| | ||||||||||| ||||||    
T  19654513 cacatacaaataaatgataatttggtaatatcaacacataaaatagacacattaattacactaacagtttttcttaagaaatgtgaa 19654427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 28116525 - 28116611
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || ||||||| ||| ||||||||||||| ||||| |||||||||||| ||||  |||||||| || ||||||    
T  28116525 cacatacaaacaaatgataatttggcaatattaacacacaaaatagacatattaattacactaacaacttttcttaaaaaatgtgaa 28116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 37625145 - 37625231
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||| ||||||| || ||||| ||||| ||||||||||||| | |||||||||||| ||||||||  ||||||||||| ||||||    
T  37625145 cacatataaacaaatgataatttagtaatattaacacacaaaataaacacattaattatactgacaacttttcttaagaaatgtgaa 37625231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 281
Target Start/End: Complemental strand, 16502523 - 16502387
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaat 243  Q
    |||||||||| ||||||||||| | |  || |||| |||| |||| ||||  ||||| |||| ||||||||||||||| ||| ||||||||||||| |||    
T  16502523 gttaaagtactaaaataagtaactctaaaacaaaaagttgtgtaaatattgccaagagaaaa-taaaaatttgtatttccaagacaaagtttctactaat 16502425  T
Q  244 agattctttaaccaatgccattagaacactagttagca 281  Q
     ||||| ||||||| |||| ||||  |||| |||||||    
T  16502424 ggattccttaaccattgcccttagggcactggttagca 16502387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 5168064 - 5168004
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacac 76  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  5168064 cacatacaaacaaatgacaatttagtaatattaacgcacaaaacagacatattaattacac 5168004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 10602231 - 10602287
Alignment:
Q  21 acaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacact 77  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||    
T  10602231 acaaacaaaagacaatttagtaatattaacacacaaaatagacaaattaattacact 10602287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 31486571 - 31486487
Alignment:
Q  18 catacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||| ||||||| || ||||| ||||| ||||||||||||| ||||||||||||| |||| ||||  ||||||||||| ||||||    
T  31486571 catataaacaaaggataatttagtaatattaacacacaaaatagacacattaattgcactaacaacttttcttaagaaatgtgaa 31486487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 33246517 - 33246593
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||| || ||||||||||| ||||||||||||| |||||  ||||||||||| ||||  ||||||||    
T  33246517 cacatacaaacaaaggataatttggtaatattaacacacaaaatagacattttaattacactaacaacttttcttaa 33246593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 5416889 - 5416973
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||  |||||  ||||  ||||||||||| ||||||    
T  5416889 cacatacaaacaaaacacaatttggtaatattaacaaacaaaatagacacatta--tacacaaacaacttttcttaagaaatgtgaa 5416973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20291425 - 20291339
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || ||||| ||||| ||||| ||||||| |||||||||||||||| |  |||  ||||||||||| ||||||    
T  20291425 cacatacaaacaaatgataatttagtaatattaacccacaaaatagacacattaattacattaccaacttttcttaagaaatgtgaa 20291339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 3684209 - 3684294
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||| || |||||  |||| |||| |||||||| ||||||||||||||||| |||||| |||||||| || ||||||    
T  3684209 acatataaacaaatgataatttaataatattaatacacaaaatagacacattaattacaccgacaatctttcttaataaatgtgaa 3684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 20116535 - 20116437
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||   ||||||||||| ||||||  |||||||| || | |||| || |||||||||    
T  20116535 cacatacaaacaaatgacaatttcctaatattaacacacaaaacag--gcattaattacattgacaacttttcttaataaatatgaaaaatgcaatgggt 20116438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 51088909 - 51088990
Alignment:
Q  144 gttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaa 225  Q
    |||| ||||| ||||||||||| ||||||||||||  ||| |||||||||   |||||||||||||||||||  ||||||||    
T  51088909 gttagagtactaaaataagtaactttgtaataaaaaattgtgtaattatttgtaagataaaagtaaaaatttacattttcaa 51088990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 39414321 - 39414265
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| ||||| |||||||    
T  39414321 cacatacaaacaaaagataatttgataatattaacacacaaaatagacatattaatt 39414265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 45628111 - 45628170
Alignment:
Q  33 caatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||| ||||  ||||||||    
T  45628111 caatttggtaatattaatacacaaaacagacacatcaattacactaacaacttttcttaa 45628170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 2392644 - 2392579
Alignment:
Q  196 caagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgc 261  Q
    ||||| ||||||||||| ||| |||| ||| ||||||||||||| ||| ||||| |||||||||||    
T  2392644 caagacaaaagtaaaaacttgcatttacaagacaaagtttctactaatggattccttaaccaatgc 2392579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 54359739 - 54359690
Alignment:
Q  46 ttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||| ||||||||||||||||||| ||||||||  |||||||||||    
T  54359739 ttaacacataaaacagacacattaattatactgacaacttttcttaagaa 54359690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 7002268 - 7002192
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||| || ||||||||||| |||||||| |||| | | ||||||||| || | ||||| ||||||||    
T  7002268 cacatacaaacaaaggataatttggtaatattaacacataaaatataaacattaattgcattaacaatttttcttaa 7002192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 35142591 - 35142646
Alignment:
Q  175 aaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaa 231  Q
    ||||||| | |||||||||| |||||||||||| ||||||||||||||||| |||||    
T  35142591 aaaatgtagtgtaattatta-caagataaaagttaaaatttgtattttcaagacaaa 35142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 54701310 - 54701393
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| ||| ||||||||| ||||   ||||||| ||||| ||| |||||||||||||||||  |||||||| || ||||||    
T  54701310 cacatacaaataaatgacaatttgataat---aacacactaaacaaacatattaattacactgacaacttttcttaaaaaatgtgaa 54701393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 3113406 - 3113363
Alignment:
Q  69 aattacactgacaatatttcttaagaattgtgaagaaggcaatg 112  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||    
T  3113406 aattacactgacaatatttattaagaaatgtgaaaaaggcaatg 3113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 26203214 - 26203139
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    ||||||||| |||||||||||| ||||| |||||||| |||| | | |||||||||||| | ||||  ||||||||    
T  26203214 acatacaaagaaaagacaattttgtaatattaacacataaaatatatacattaattacagtaacaacttttcttaa 26203139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 26186775 - 26186817
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaa 58  Q
    |||||||||||||| ||||||||| |||| |||||||||||||    
T  26186775 cacatacaaacaaatgacaatttgataatattaacacacaaaa 26186817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 32107927 - 32107874
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    ||||||| ||||||||||||| |||| |||| |||||||||| | |||||||||    
T  32107927 atacaaataaaagacaatttgataatattaatacacaaaacatatacattaatt 32107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 51918675 - 51918728
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||||||||||  | |||||||||||  |||||||||||| |||||||||||||    
T  51918675 atacaaacaaagaataatttggtaatactaacacacaaaatagacacattaatt 51918728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 20792009 - 20791933
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||| |||||| ||||  ||||| ||||||||||||| ||||| ||||||| ||||  |||  |||||||||||    
T  20792009 atacaaataaaagataattatgtaatattaacacacaaaatagacatattaattgcactaccaacttttcttaagaa 20791933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 23131558 - 23131426
Alignment:
Q  139 tatttgttaaagtaccaaaataagtaattttgtaataaaatgttgcgtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttcta 238  Q
    |||| |||||||||| |||||||||||||||| ||||||| ||||||||||||||   || | |||||||||||||| ||||||||| ||||||||||||    
T  23131558 tattggttaaagtactaaaataagtaattttgcaataaaaagttgcgtaattattgctaaaacaaaagtaaaaatttatattttcaagacaaagtttcta 23131459  T
Q  239 caaatagattctttaaccaatgccattagaaca 271  Q
    | ||| ||||| ||| |||||||| || |||||    
T  23131458 ctaatggattccttatccaatgcccttcgaaca 23131426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 1763898 - 1763819
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  1763898 cacatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaa 1763819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 5895816 - 5895691
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt 115  Q
    |||||| ||| ||| |||||||| ||||| |||| ||||||||||||||||||||||||| | ||||  ||||||||||| |||||| ||| |||||| |    
T  5895816 cacataaaaataaaggacaatttcgtaatattaatacacaaaacagacacattaattacattaacaacttttcttaagaaatgtgaaaaagacaatggat 5895717  T
Q  116 g-ctacattaagggacgcagggagta 140  Q
    | ||||||||||||||| ||||||||    
T  5895716 gcctacattaagggacggagggagta 5895691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 12514606 - 12514682
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  12514606 cacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattgcactaacaatttttcttaa 12514682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 16327205 - 16327122
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||  ||||||||||| ||||||    
T  16327205 atacaaacaaatgacaatttggtaatattaacacacaaaacagacacattaattatattgacaacttttcttaagaaatgtgaa 16327122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 15981879 - 15981793
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||  ||||  ||||||||||| ||||||    
T  15981879 cacatacaaactaatgacaatttggtaatattaacacacaaaacagacacattaattacaccaacaacttttcttaagaaatgtgaa 15981793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 22410864 - 22410950
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||  ||||||||||| ||||||    
T  22410864 cacatacaaataaaagacaatttggtaatattaacataaaaaacagacacattaattacactaacaacttttcttaagaaatgtgaa 22410950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 31945933 - 31946019
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||| ||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||||| ||||||    
T  31945933 cacatataaacaaacgacaatttggtaatattaacacacaaaatagacacattaattacactaacaaattttcttaagaaatgtgaa 31946019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 3729474 - 3729395
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  3729474 cacatacaaacaaagaacaatttggtaatattaacacacaaaatagacacattaattacaccaacaatttttcttaagaa 3729395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 16350603 - 16350540
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaa 82  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16350603 atacaaacaaatgacaatttggtaatattaacacacaaaacagactcattaattacactgacaa 16350540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 4250694 - 4250758
Alignment:
Q  31 gacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4250694 gacaacttcgtaatattaacacacaaaacagacacattaattacactgacaatttttcttaagaa 4250758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 11302940 - 11302845
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaat 111  Q
    ||||| |||||||| |||||||| ||||| |||||||| ||||||||||||||||||| ||| ||||  ||||||||||| |||||| ||| ||||    
T  11302940 cacatgcaaacaaaggacaattttgtaatattaacacaaaaaacagacacattaattatactaacaacttttcttaagaaatgtgaaaaagacaat 11302845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 30465989 - 30466068
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||  ||| |||||||    
T  30465989 cacatacaaacaaaagataatttggtaatattaacacacaaaacaaacatattaattacaccgacaacttttgttaagaa 30466068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 197472 - 197562
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaag 106  Q
    |||||||||||||| ||||||||  |||| || |||||||||||| |||||||||||| ||||| ||  ||||||||||| ||||||||||    
T  197472 cacatacaaacaaatgacaatttaataatattgacacacaaaacaaacacattaattatactgataacttttcttaagaaatgtgaagaag 197562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 19839016 - 19838930
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||| |||||| ||||  ||||||||||| ||||||    
T  19839016 cacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaa 19838930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 30248645 - 30248560
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaa 105  Q
    ||||||||||| | |||||||||||| ||||||||||||||| ||||||||| |||||| ||||  ||||||||||| |||||||||    
T  30248645 atacaaacaaatgccaatttggtaatattaacacacaaaacaaacacattaa-tacacttacaacttttcttaagaaatgtgaagaa 30248560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 9461378 - 9461282
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatg 112  Q
    ||||||||||||||  | ||||| ||||| |||||||| |||||| ||||||||||||||| ||||| ||||||||| || |||||| ||| |||||    
T  9461378 cacatacaaacaaagaataatttagtaatattaacacataaaacaaacacattaattacaccgacaacatttcttaataaatgtgaaaaagacaatg 9461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 5084558 - 5084648
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacac----attaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||| ||||    |||||||||||| ||||  ||||||||||| ||||||    
T  5084558 cacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacatttattaattacactaacaacttttcttaagaaatgtgaa 5084648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 2839059 - 2839135
Alignment:
Q  202 aaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaatgccattagaacactagtta 278  Q
    |||||||||||||| ||||||||| ||||||||||||| ||| ||||| |||||||||| | ||||| |||| ||||    
T  2839059 aaaagtaaaaatttatattttcaagacaaagtttctactaatggattccttaaccaatgtccttagagcactggtta 2839135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 34513239 - 34513315
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    |||||||||||||| || ||||| ||||| |||||||||||||||||||||||| |||  |||||||  ||||||||    
T  34513239 cacatacaaacaaaggataatttcgtaatattaacacacaaaacagacacattatttatgctgacaaattttcttaa 34513315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 6791461 - 6791377
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||  |||||||||||||| ||||||  ||| ||||||| ||||||    
T  6791461 cacatacaaacaaatgacaatttaataatattaacacacaaaac--acacattaattacattgacaactttttttaagaaatgtgaa 6791377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 5305133 - 5305183
Alignment:
Q  185 gtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagttt 235  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  5305133 gtaattattattaagataaaagtaaaaacttgtattttctaaacaaagttt 5305183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 16186656 - 16186535
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggt- 115  Q
    ||||||||||||  |||||||| ||||  |||||| ||||||||||||||||||||||||| | ||  |||||||  || |||||| |||  |||||||     
T  16186656 acatacaaacaagggacaatttcgtaaa-ttaacatacaaaacagacacattaattacactaataacttttcttacaaaatgtgaaaaagataatgggtg 16186558  T
Q  116 gctacattaagggacgcagggag 138  Q
    |||||||||||||| | ||||||    
T  16186557 gctacattaagggatggagggag 16186535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 28238336 - 28238421
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||  || ||| ||||||| ||||||||||||| |||||||||||||| ||| ||||| ||| ||||||| ||||||    
T  28238336 acataaaaacaatggataatatggtaatattaacacacaaaatagacacattaattatactaacaatttttattaagaaatgtgaa 28238421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 10669298 - 10669362
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaat 83  Q
    |||||| ||||  ||||||||||||| ||||||||||||| ||||||||||||| |||| |||||    
T  10669298 atacaatcaaagaacaatttggtaatattaacacacaaaatagacacattaattgcactaacaat 10669362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 2223702 - 2223771
Alignment:
Q  185 gtaattattatcaagataaaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaa 254  Q
    ||||||||||| |||| | ||||||||||||||||||| |||||| | ||| ||| ||||||||| ||||    
T  2223702 gtaattattattaagacagaagtaaaaatttgtatttttaaaacagaatttttactaatagattccttaa 2223771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 9428251 - 9428195
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatta 73  Q
    ||||||||||||| || |||||| |||| ||||||||||||| ||| ||||||||||    
T  9428251 acatacaaacaaatgataatttgataatattaacacacaaaatagatacattaatta 9428195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 33607440 - 33607384
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||||||||||||| || |||||| |||| ||||||||| ||| |||||||||||||    
T  33607440 cacatacaaacaaaggataatttgataatattaacacactaaatagacacattaatt 33607384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 3887971 - 3888049
Alignment:
Q  23 aaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||||||| |||| ||||||||||||| ||||||||||| | || | ||||  ||||||||||| ||||||    
T  3887971 aaacataagacaatttg-taatattaacacacaaaatagacacattaactgcaataacaacttttcttaagaaatgtgaa 3888049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 20523057 - 20522978
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    ||||||||||||| | | ||||||||||| || |||||||||  | || |||||||| |||| |||| ||||||||||||    
T  20523057 cacatacaaacaagaaataatttggtaatattgacacacaaactaaactcattaattgcactaacaacatttcttaagaa 20522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 31536097 - 31536018
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||||| |||||||||| |||||| |||| |||||| | |||| ||| | |||||||||||| ||||  |||||||||||    
T  31536097 cacatataaacaaaagataatttgataatattaacaaataaaatagatatattaattacactaacaacttttcttaagaa 31536018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 3307973 - 3308026
Alignment:
Q  59 cagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatg 112  Q
    |||||||||||| | ||| |||||||||||||||||| |||||| || ||||||    
T  3307973 cagacacattaactgcacagacaatatttcttaagaaatgtgaaaaatgcaatg 3308026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 12514776 - 12514832
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||||| ||||||| || ||||||||||| |||||| ||||||  ||||||||||||    
T  12514776 cacatataaacaaatgataatttggtaatattaacatacaaaatggacacattaatt 12514832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 18592748 - 18592692
Alignment:
Q  203 aaagtaaaaatttgtattttcaaaacaaagtttctacaaatagattctttaaccaat 259  Q
    |||| |||||||| |||||| |||||||||||||||| ||  ||||| |||||||||    
T  18592748 aaagcaaaaatttatatttttaaaacaaagtttctactaaaggattccttaaccaat 18592692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 31780209 - 31780153
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaatt 72  Q
    |||| ||||||||| |||||||| ||||| | |||| |||||| |||||||||||||    
T  31780209 cacaaacaaacaaaggacaatttagtaatatcaacatacaaaatagacacattaatt 31780153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 1933 - 2019
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| || ||||||||||| ||||||||||||| |||||||||||||||||| ||||  | ||||||||| ||||||    
T  1933 cacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaattacactaacaacttatcttaagaaatgtgaa 2019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 214703 - 214617
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    |||||||||||||| |||||||||||||| |||||||| |||  |||||||||||||||||| ||||  ||||||||||| ||||||    
T  214703 cacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacactaacaacttttcttaagaaatgtgaa 214617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 22144 - 22025
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaatgggtg 116  Q
    ||||||||||||| |||||| ||||||| |||| |||||||||| |||||||||||||||||| || |||||     || |||||| ||| ||||  |||    
T  22144 acatacaaacaaaggacaatatggtaatattaatacacaaaacaaacacattaattacactgataacatttc-----aaatgtgaaaaagacaatatgtg 22050  T
Q  117 -ctacattaagggacgcagggagta 140  Q
     ||||||||||||||| ||||||||    
T  22049 cctacattaagggacggagggagta 22025  T

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Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 18774 - 18693
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaatt 97  Q
    |||||| ||||||| |||||||||||||| ||||| ||||||| | ||| ||||||| || | ||||  ||| |||||||||    
T  18774 cacatagaaacaaatgacaatttggtaatattaacccacaaaataaacaaattaattgcattaacaactttttttaagaatt 18693  T

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Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 38498 - 38583
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaa 102  Q
    ||||| ||||||  || ||| ||||||| ||||||||||||| |||||||||||||| ||| ||||| ||| ||||||| ||||||    
T  38498 acataaaaacaatggataatatggtaatattaacacacaaaatagacacattaattatactaacaatttttattaagaaatgtgaa 38583  T

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Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 99837 - 99913
Alignment:
Q  16 cacatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaa 92  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||| |||||||| | || |||| ||||  ||||||||    
T  99837 cacattcaaacaaaagacaatttcgtaatattaacacacaaaatagacacataagttgcactaacaacttttcttaa 99913  T

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Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 49220 - 49142
Alignment:
Q  17 acatacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaa 95  Q
    |||| |||||||| ||||||||  |||| ||||||||||||  ||||| |||||||||| | ||||| |||||||||||    
T  49220 acatgcaaacaaatgacaatttaataatattaacacacaaagtagacatattaattacattaacaatttttcttaagaa 49142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 19612 - 19492
Alignment:
Q  19 atacaaacaaaagacaatttggtaatgttaacacacaaaacagacacattaattacactgacaatatttcttaagaattgtgaagaaggcaa--tgggtg 116  Q
    ||||||||||| || ||||||||||| |||   ||||||| ||||| ||||||| |||||||||  |||| |||||| |||||| ||  |||  |||||     
T  19612 atacaaacaaaggataatttggtaatatta--gcacaaaatagacatattaattgcactgacaacttttcgtaagaaatgtgaaaaatacaaagtgggt- 19516  T
Q  117 ctacattaagggacgcagggagta 140  Q
     |||||||||||||| ||||||||    
T  19515 ttacattaagggacggagggagta 19492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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