View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16365_high_2 (Length: 402)

Name: NF16365_high_2
Description: NF16365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16365_high_2
NF16365_high_2
[»] chr5 (71 HSPs)
chr5 (243-392)||(42480645-42480788)
chr5 (1-237)||(42480303-42480542)
chr5 (171-234)||(23117489-23117552)
chr5 (64-159)||(4425389-4425484)
chr5 (180-234)||(42480555-42480609)
chr5 (64-137)||(4432833-4432906)
chr5 (171-231)||(4151150-4151210)
chr5 (175-243)||(13420503-13420571)
chr5 (175-241)||(9087577-9087643)
chr5 (179-243)||(15966650-15966714)
chr5 (175-231)||(15966724-15966780)
chr5 (171-243)||(34148009-34148081)
chr5 (171-231)||(43585576-43585636)
chr5 (175-241)||(3161297-3161363)
chr5 (178-231)||(8408872-8408925)
chr5 (179-228)||(16018518-16018567)
chr5 (175-231)||(14064813-14064869)
chr5 (173-241)||(14416477-14416545)
chr5 (171-231)||(15385817-15385877)
chr5 (175-231)||(23042043-23042099)
chr5 (175-231)||(28803133-28803189)
chr5 (175-243)||(31690976-31691044)
chr5 (171-231)||(32146908-32146968)
chr5 (175-231)||(34186436-34186492)
chr5 (175-231)||(36337815-36337871)
chr5 (177-241)||(36441098-36441162)
chr5 (171-231)||(37554346-37554406)
chr5 (175-231)||(38404151-38404207)
chr5 (179-230)||(22473945-22473996)
chr5 (175-230)||(32146830-32146885)
chr5 (175-234)||(36346792-36346851)
chr5 (184-231)||(36964242-36964289)
chr5 (175-233)||(4151234-4151292)
chr5 (175-241)||(5787482-5787548)
chr5 (175-237)||(14064885-14064947)
chr5 (175-229)||(33677195-33677249)
chr5 (173-231)||(37915751-37915809)
chr5 (181-231)||(38507937-38507987)
chr5 (181-231)||(40914194-40914244)
chr5 (174-231)||(5787560-5787617)
chr5 (171-236)||(8694482-8694547)
chr5 (198-243)||(12165353-12165398)
chr5 (184-241)||(21152600-21152657)
chr5 (184-241)||(21159735-21159792)
chr5 (184-241)||(21163542-21163599)
chr5 (178-231)||(35469477-35469530)
chr5 (175-243)||(1723246-1723314)
chr5 (175-231)||(3780983-3781039)
chr5 (175-231)||(8694564-8694620)
chr5 (175-231)||(8959866-8959922)
chr5 (183-231)||(9742755-9742803)
chr5 (183-243)||(11784355-11784415)
chr5 (175-231)||(13359164-13359220)
chr5 (175-231)||(13461553-13461609)
chr5 (175-231)||(13461631-13461687)
chr5 (175-231)||(15385891-15385947)
chr5 (195-243)||(18475365-18475413)
chr5 (175-231)||(20361980-20362036)
chr5 (175-231)||(21344530-21344586)
chr5 (171-231)||(22584313-22584373)
chr5 (175-231)||(26395169-26395225)
chr5 (175-231)||(26395234-26395290)
chr5 (175-231)||(34102078-34102134)
chr5 (175-231)||(36964311-36964367)
chr5 (171-231)||(37684969-37685029)
chr5 (175-231)||(38860881-38860937)
chr5 (175-231)||(39916288-39916344)
chr5 (175-227)||(40428461-40428513)
chr5 (179-231)||(41062556-41062608)
chr5 (203-243)||(42922420-42922460)
chr5 (175-243)||(43176254-43176322)
[»] chr2 (55 HSPs)
chr2 (64-155)||(42795929-42796020)
chr2 (175-243)||(5717941-5718009)
chr2 (171-243)||(29573883-29573955)
chr2 (171-243)||(33425366-33425438)
chr2 (171-236)||(34438744-34438809)
chr2 (185-241)||(5773849-5773905)
chr2 (175-233)||(29573817-29573875)
chr2 (175-231)||(4101951-4102007)
chr2 (176-243)||(41823745-41823812)
chr2 (175-237)||(9436495-9436557)
chr2 (64-161)||(19906299-19906397)
chr2 (175-228)||(19250198-19250251)
chr2 (171-228)||(37980672-37980729)
chr2 (183-231)||(2795321-2795369)
chr2 (175-231)||(6006685-6006741)
chr2 (171-243)||(30202483-30202555)
chr2 (175-243)||(42263084-42263152)
chr2 (175-231)||(42579022-42579078)
chr2 (181-236)||(3463226-3463281)
chr2 (175-234)||(5094843-5094902)
chr2 (177-236)||(20556591-20556650)
chr2 (175-241)||(4898168-4898234)
chr2 (175-241)||(4945562-4945628)
chr2 (175-241)||(12440633-12440699)
chr2 (175-237)||(20195292-20195354)
chr2 (179-229)||(24156602-24156652)
chr2 (175-241)||(25668482-25668548)
chr2 (175-241)||(30905195-30905261)
chr2 (175-241)||(42230525-42230591)
chr2 (175-236)||(8079420-8079481)
chr2 (175-231)||(18461454-18461511)
chr2 (175-220)||(35567230-35567275)
chr2 (175-231)||(324799-324855)
chr2 (171-231)||(9419398-9419458)
chr2 (175-231)||(10237604-10237660)
chr2 (211-243)||(11342039-11342071)
chr2 (187-231)||(13477197-13477241)
chr2 (175-231)||(18967305-18967361)
chr2 (5-49)||(19906419-19906463)
chr2 (179-231)||(20128825-20128877)
chr2 (175-231)||(30202565-30202621)
chr2 (175-234)||(32346080-32346140)
chr2 (175-231)||(33363640-33363696)
chr2 (175-231)||(35607418-35607474)
chr2 (171-231)||(36490560-36490620)
chr2 (171-231)||(37354879-37354939)
chr2 (211-243)||(37396243-37396275)
chr2 (184-236)||(38262004-38262056)
chr2 (180-224)||(38721471-38721515)
chr2 (175-231)||(42230603-42230659)
chr2 (179-231)||(42579100-42579152)
chr2 (175-231)||(42755094-42755150)
chr2 (171-243)||(43514825-43514897)
chr2 (175-231)||(44949345-44949401)
chr2 (175-231)||(44949423-44949479)
[»] chr1 (57 HSPs)
chr1 (177-243)||(45810314-45810380)
chr1 (175-231)||(1358175-1358231)
chr1 (175-241)||(24478736-24478802)
chr1 (173-243)||(34598931-34599001)
chr1 (175-232)||(24023445-24023502)
chr1 (175-231)||(26856054-26856110)
chr1 (175-231)||(40907182-40907238)
chr1 (175-234)||(1344371-1344430)
chr1 (175-234)||(2091749-2091808)
chr1 (175-230)||(49753090-49753145)
chr1 (171-233)||(17622762-17622824)
chr1 (173-227)||(29688475-29688529)
chr1 (175-241)||(38847373-38847439)
chr1 (173-231)||(45011489-45011547)
chr1 (173-242)||(51245355-51245424)
chr1 (175-231)||(7230012-7230068)
chr1 (175-231)||(7230140-7230196)
chr1 (175-227)||(12062197-12062249)
chr1 (171-227)||(21852436-21852492)
chr1 (175-231)||(27146105-27146161)
chr1 (171-231)||(32067563-32067623)
chr1 (175-231)||(34038001-34038057)
chr1 (175-231)||(42761314-42761370)
chr1 (175-243)||(48636787-48636855)
chr1 (175-226)||(6792374-6792425)
chr1 (180-231)||(17387658-17387709)
chr1 (173-244)||(34332949-34333020)
chr1 (64-159)||(46830268-46830363)
chr1 (181-231)||(9947835-9947885)
chr1 (175-237)||(16426911-16426973)
chr1 (179-241)||(47011315-47011377)
chr1 (175-241)||(52253541-52253607)
chr1 (178-243)||(3140950-3141015)
chr1 (178-231)||(4683018-4683071)
chr1 (175-231)||(6169891-6169948)
chr1 (171-216)||(8552029-8552074)
chr1 (175-236)||(15285318-15285379)
chr1 (175-236)||(37215248-37215309)
chr1 (175-224)||(48376805-48376854)
chr1 (175-228)||(52253622-52253675)
chr1 (214-246)||(3141022-3141054)
chr1 (175-231)||(4523019-4523075)
chr1 (175-231)||(4974126-4974182)
chr1 (175-231)||(10008824-10008880)
chr1 (175-231)||(10008902-10008958)
chr1 (171-231)||(12062275-12062335)
chr1 (171-231)||(21909840-21909900)
chr1 (175-231)||(26855976-26856032)
chr1 (175-243)||(34662408-34662476)
chr1 (201-241)||(35050003-35050043)
chr1 (171-231)||(35838799-35838859)
chr1 (171-231)||(38824290-38824350)
chr1 (198-242)||(39940513-39940557)
chr1 (211-243)||(43738674-43738706)
chr1 (175-231)||(47912575-47912631)
chr1 (175-243)||(50008899-50008967)
chr1 (183-231)||(52879996-52880044)
[»] chr6 (29 HSPs)
chr6 (175-243)||(3212244-3212312)
chr6 (64-156)||(8645162-8645255)
chr6 (171-231)||(31759405-31759465)
chr6 (175-231)||(2693665-2693721)
chr6 (171-231)||(3343858-3343918)
chr6 (175-231)||(7498434-7498490)
chr6 (171-231)||(13902022-13902082)
chr6 (183-234)||(3418767-3418818)
chr6 (184-231)||(28737839-28737886)
chr6 (179-241)||(4156410-4156472)
chr6 (175-231)||(3418837-3418893)
chr6 (175-231)||(4156342-4156398)
chr6 (175-231)||(32364019-32364075)
chr6 (184-243)||(9908205-9908264)
chr6 (184-243)||(10644276-10644335)
chr6 (177-231)||(1935783-1935837)
chr6 (177-231)||(8785508-8785562)
chr6 (175-241)||(15467644-15467710)
chr6 (177-231)||(29938355-29938409)
chr6 (175-208)||(2343344-2343377)
chr6 (195-236)||(13853067-13853108)
chr6 (175-231)||(667731-667787)
chr6 (178-226)||(2343385-2343433)
chr6 (175-231)||(3343780-3343836)
chr6 (175-231)||(5433412-5433468)
chr6 (171-231)||(12349896-12349956)
chr6 (187-243)||(15467588-15467644)
chr6 (179-231)||(28542337-28542389)
chr6 (175-231)||(32436269-32436325)
[»] chr7 (60 HSPs)
chr7 (62-135)||(13471378-13471451)
chr7 (170-231)||(26743198-26743259)
chr7 (175-243)||(22332366-22332434)
chr7 (171-243)||(48590654-48590726)
chr7 (171-237)||(4027293-4027359)
chr7 (171-241)||(17882707-17882777)
chr7 (175-236)||(25250233-25250294)
chr7 (171-231)||(13846709-13846769)
chr7 (175-235)||(24936684-24936744)
chr7 (171-231)||(35160748-35160808)
chr7 (178-234)||(42061775-42061831)
chr7 (175-237)||(6580508-6580570)
chr7 (171-241)||(23735998-23736068)
chr7 (173-231)||(31669864-31669922)
chr7 (175-228)||(4187995-4188048)
chr7 (175-236)||(22332300-22332361)
chr7 (175-231)||(5082679-5082735)
chr7 (179-231)||(12307824-12307876)
chr7 (93-161)||(13471185-13471253)
chr7 (177-237)||(16100168-16100228)
chr7 (171-231)||(20353056-20353116)
chr7 (183-231)||(23736080-23736128)
chr7 (175-231)||(30005879-30005935)
chr7 (175-243)||(32389224-32389292)
chr7 (175-231)||(33784063-33784119)
chr7 (175-231)||(35160830-35160886)
chr7 (171-231)||(39728647-39728707)
chr7 (176-231)||(16100244-16100299)
chr7 (171-234)||(19672990-19673053)
chr7 (184-243)||(30005945-30006004)
chr7 (174-229)||(37668004-37668059)
chr7 (175-237)||(40235103-40235166)
chr7 (175-234)||(41888807-41888866)
chr7 (175-241)||(5691547-5691613)
chr7 (201-243)||(23092383-23092425)
chr7 (175-237)||(26153990-26154052)
chr7 (175-237)||(31758558-31758620)
chr7 (171-241)||(46221077-46221147)
chr7 (175-244)||(39728568-39728637)
chr7 (175-216)||(42644163-42644204)
chr7 (198-243)||(46578291-46578336)
chr7 (175-231)||(5212124-5212180)
chr7 (171-231)||(5639638-5639698)
chr7 (175-231)||(7208745-7208801)
chr7 (175-231)||(7344979-7345035)
chr7 (175-231)||(10595494-10595550)
chr7 (175-231)||(10595572-10595628)
chr7 (175-231)||(11909267-11909323)
chr7 (183-227)||(24166274-24166318)
chr7 (175-231)||(24936762-24936818)
chr7 (181-225)||(28289562-28289606)
chr7 (171-231)||(30404964-30405024)
chr7 (175-231)||(31671003-31671059)
chr7 (175-231)||(31857036-31857092)
chr7 (171-231)||(31857151-31857211)
chr7 (181-233)||(39976053-39976105)
chr7 (171-231)||(43067023-43067083)
chr7 (175-231)||(43093498-43093554)
chr7 (178-234)||(43232943-43232999)
chr7 (175-231)||(46477214-46477270)
[»] chr8 (28 HSPs)
chr8 (175-231)||(2827359-2827415)
chr8 (175-241)||(41569572-41569638)
chr8 (177-230)||(3270577-3270630)
chr8 (171-231)||(44838773-44838833)
chr8 (173-231)||(41177959-41178017)
chr8 (190-243)||(9203402-9203455)
chr8 (198-243)||(42149152-42149197)
chr8 (175-231)||(30245585-30245641)
chr8 (195-231)||(32032972-32033008)
chr8 (175-231)||(33570589-33570645)
chr8 (173-241)||(36308585-36308653)
chr8 (177-232)||(14228076-14228131)
chr8 (184-231)||(35063541-35063588)
chr8 (175-237)||(1647115-1647177)
chr8 (175-241)||(26489676-26489742)
chr8 (178-231)||(3611850-3611903)
chr8 (175-231)||(8104460-8104516)
chr8 (175-231)||(9203465-9203521)
chr8 (183-243)||(11302012-11302072)
chr8 (183-243)||(11302959-11303019)
chr8 (175-227)||(13832093-13832145)
chr8 (175-231)||(26492390-26492446)
chr8 (184-236)||(32016786-32016838)
chr8 (175-231)||(34188321-34188377)
chr8 (175-231)||(35063464-35063519)
chr8 (85-161)||(38432778-38432854)
chr8 (175-231)||(40802206-40802262)
chr8 (175-231)||(43484013-43484069)
[»] chr4 (53 HSPs)
chr4 (175-231)||(24529654-24529710)
chr4 (175-243)||(44551267-44551335)
chr4 (175-231)||(48472757-48472813)
chr4 (176-243)||(53402995-53403062)
chr4 (171-233)||(49806357-49806419)
chr4 (175-231)||(31914409-31914465)
chr4 (175-231)||(40545299-40545355)
chr4 (175-231)||(42013149-42013205)
chr4 (175-231)||(48088013-48088069)
chr4 (171-231)||(52164640-52164700)
chr4 (175-234)||(34595760-34595819)
chr4 (178-233)||(37306931-37306986)
chr4 (171-234)||(49632316-49632379)
chr4 (174-237)||(51394173-51394236)
chr4 (184-234)||(34595702-34595752)
chr4 (175-241)||(35003113-35003179)
chr4 (177-243)||(54675275-54675341)
chr4 (175-236)||(18592348-18592409)
chr4 (175-243)||(23795647-23795716)
chr4 (175-236)||(25250844-25250905)
chr4 (178-231)||(38616491-38616544)
chr4 (175-231)||(8560511-8560567)
chr4 (175-231)||(9968304-9968360)
chr4 (175-231)||(24156142-24156198)
chr4 (171-227)||(33084802-33084857)
chr4 (175-231)||(34166115-34166171)
chr4 (171-231)||(37306830-37306890)
chr4 (175-231)||(50038531-50038587)
chr4 (175-231)||(50045753-50045809)
chr4 (175-227)||(51394101-51394153)
chr4 (180-231)||(9802996-9803047)
chr4 (175-234)||(18327937-18327996)
chr4 (175-234)||(18437403-18437462)
chr4 (184-231)||(24529585-24529632)
chr4 (175-241)||(20787627-20787693)
chr4 (171-241)||(23329369-23329439)
chr4 (195-236)||(19878362-19878403)
chr4 (175-224)||(48088083-48088132)
chr4 (175-231)||(4711487-4711543)
chr4 (85-149)||(5051803-5051867)
chr4 (204-236)||(5816571-5816603)
chr4 (175-231)||(8014186-8014242)
chr4 (175-231)||(15133915-15133971)
chr4 (179-243)||(19911242-19911306)
chr4 (179-231)||(26206675-26206727)
chr4 (171-231)||(31808321-31808381)
chr4 (175-231)||(34709656-34709712)
chr4 (175-231)||(35967462-35967518)
chr4 (171-231)||(36712132-36712192)
chr4 (183-231)||(37252109-37252157)
chr4 (175-231)||(38224018-38224074)
chr4 (175-231)||(46779375-46779431)
chr4 (175-231)||(51975205-51975261)
[»] scaffold0019 (1 HSPs)
scaffold0019 (175-234)||(45524-45583)
[»] chr3 (64 HSPs)
chr3 (175-234)||(38245660-38245719)
chr3 (176-241)||(29676210-29676275)
chr3 (175-231)||(14626709-14626765)
chr3 (171-231)||(26043331-26043391)
chr3 (175-231)||(32956421-32956477)
chr3 (177-245)||(44414040-44414108)
chr3 (175-231)||(55198613-55198669)
chr3 (175-242)||(29076528-29076595)
chr3 (175-238)||(32146467-32146530)
chr3 (171-234)||(43898092-43898155)
chr3 (175-234)||(54008285-54008344)
chr3 (75-149)||(14417788-14417862)
chr3 (175-241)||(22995699-22995765)
chr3 (171-241)||(39289632-39289702)
chr3 (173-227)||(51486427-51486481)
chr3 (171-228)||(25245232-25245289)
chr3 (170-231)||(38446820-38446880)
chr3 (175-236)||(51204486-51204547)
chr3 (1-49)||(14418052-14418100)
chr3 (175-231)||(17004961-17005017)
chr3 (175-231)||(24350875-24350931)
chr3 (175-231)||(25823681-25823737)
chr3 (181-241)||(37331670-37331730)
chr3 (171-231)||(44544234-44544294)
chr3 (175-243)||(46739376-46739444)
chr3 (178-230)||(47143296-47143348)
chr3 (171-231)||(54985522-54985582)
chr3 (178-237)||(21659144-21659203)
chr3 (175-230)||(26043253-26043308)
chr3 (93-155)||(31180723-31180786)
chr3 (175-234)||(38446742-38446801)
chr3 (177-231)||(17501486-17501540)
chr3 (177-231)||(24350811-24350865)
chr3 (173-231)||(29676287-29676345)
chr3 (175-233)||(32956497-32956555)
chr3 (175-236)||(16894246-16894307)
chr3 (184-241)||(40326509-40326566)
chr3 (171-240)||(44544157-44544226)
chr3 (175-231)||(1927504-1927560)
chr3 (175-231)||(17005041-17005097)
chr3 (175-231)||(17501408-17501464)
chr3 (175-231)||(17940191-17940247)
chr3 (175-231)||(19679043-19679099)
chr3 (171-231)||(20821440-20821500)
chr3 (171-231)||(23317015-23317075)
chr3 (175-231)||(25995623-25995679)
chr3 (175-231)||(28811595-28811651)
chr3 (183-231)||(29076606-29076654)
chr3 (180-236)||(29352736-29352792)
chr3 (175-231)||(29352809-29352865)
chr3 (175-231)||(29726355-29726411)
chr3 (175-231)||(29726447-29726503)
chr3 (175-231)||(29726539-29726595)
chr3 (175-231)||(33638995-33639051)
chr3 (175-231)||(34935541-34935597)
chr3 (198-242)||(36571444-36571488)
chr3 (175-227)||(37740030-37740082)
chr3 (179-231)||(39530476-39530528)
chr3 (179-231)||(40326445-40326497)
chr3 (175-231)||(40760774-40760830)
chr3 (175-231)||(43333922-43333978)
chr3 (171-231)||(43556941-43557001)
chr3 (175-231)||(47342663-47342719)
chr3 (175-231)||(54690441-54690497)
[»] scaffold0121 (1 HSPs)
scaffold0121 (175-241)||(17505-17571)
[»] scaffold0236 (1 HSPs)
scaffold0236 (171-231)||(13695-13754)
[»] scaffold0002 (1 HSPs)
scaffold0002 (175-243)||(491919-491987)
[»] scaffold0136 (2 HSPs)
scaffold0136 (179-234)||(22522-22577)
scaffold0136 (175-231)||(22447-22503)
[»] scaffold0047 (1 HSPs)
scaffold0047 (187-236)||(63453-63502)
[»] scaffold0172 (1 HSPs)
scaffold0172 (175-231)||(11665-11721)
[»] scaffold0009 (3 HSPs)
scaffold0009 (175-231)||(8282-8338)
scaffold0009 (178-230)||(49669-49721)
scaffold0009 (175-231)||(49744-49800)


Alignment Details
Target: chr5 (Bit Score: 123; Significance: 4e-63; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 243 - 392
Target Start/End: Original strand, 42480645 - 42480788
Alignment:
Q  243 tttaatcggaaaaatataggttaatattttactgttactgtggagattaataatttattacagcaatgacacaaatatttaagcaaaaattgagagacag 342  Q
    ||||||||||||| ||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42480645 tttaatcggaaaagtataggttaatattttac------tgtggagattaataatttattacagcaatgacacaaatatttaagcaaaaattgagagacag 42480738  T
Q  343 tggcttttggggtccctcagtttgtgtccttatctccaacctttttgtct 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42480739 tggcttttggggtccctcagtttgtgtccttatctccaacctttttgtct 42480788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 42480303 - 42480542
Alignment:
Q  1 ctatcatatttaaagttataattcataaattacccttcaattaatgtgannnnnnnctttgacggaacaagtttccataaatgataatttagaaattata 100  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||       |||||||||||||||||||||| |||||||||||| |||||| |    
T  42480303 ctatcatatttaatgttattattcataaattacccttcaactaatgtgatttttttctttgacggaacaagtttccatgaatgataatttaaaaattaca 42480402  T
Q  101 attatattttttataactttaaaagaaataaatgacacaaactaattttgttaaagggtgtannnnnnng----tccatccgtttttaaatataagttaa 196  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||        |    ||||||||||||||||||||||  ||    
T  42480403 attgtattttttataactttaaaagaaat-aatgacacaaactaattttgttaaagggtgtcattttttgttattccatccgtttttaaatataagcaaa 42480501  T
Q  197 attgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||| | ||||||| |||||| |||||||||||||| |||||    
T  42480502 attaattttttaaattcattcaattaatgatgtatgtgatt 42480542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 23117489 - 23117552
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||    
T  23117489 tccatccgtttttaaatataagtaaaattgactttttaggttcatttatttaatgatgtatatg 23117552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 4425389 - 4425484
Alignment:
Q  64 ggaacaagtttccataaatgataatttagaaattataattatattttttataactttaaaagaaataaatgacacaaactaattttgttaaagggt 159  Q
    ||||||||||| ||| || |||||||||||||||  | ||||||||||||| ||||| | ||||||||| ||||| |||| ||||| |||||||||    
T  4425389 ggaacaagttttcatgaaggataatttagaaattgcagttatattttttatgactttgagagaaataaacgacaccaactcattttcttaaagggt 4425484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 42480609 - 42480555
Alignment:
Q  180 ttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||    
T  42480609 ttttaaatataagtaaaattgactttttaattttattgaattaatgatgtatatg 42480555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 4432833 - 4432906
Alignment:
Q  64 ggaacaagtttccataaatgataatttagaaattataattatattttttataactttaaaagaaataaatgaca 137  Q
    |||||||||||  ||||| | ||||||||||||| ||||| || ||||||||||||||| ||||||||||||||    
T  4432833 ggaacaagtttttataaagggtaatttagaaattgtaattgtaatttttataactttaagagaaataaatgaca 4432906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 4151150 - 4151210
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||| ||||||| ||||||    
T  4151150 tccatccgtttttaaatataagcaaaattgactttttaagttcattcaattaataatgtat 4151210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 13420571 - 13420503
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||  || |||| ||||||  |||||||||||||||||||||||| ||||||||    
T  13420571 tccgtttttaaatataagcaaatttgattttttaggttcatttaattaatgatgtatatggtttatatt 13420503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 9087643 - 9087577
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||  ||||||||||||||  |||||||| |||||||||||| || ||||||    
T  9087643 tccgtttttaaatataagcaaaattgactttttaggttcatttatttaatgatgtatgtggtttata 9087577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 15966650 - 15966714
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||| ||||| ||||||||  |||||| |||||||||||||| || ||||||||    
T  15966650 tttttaaatataagtaaaattaactttttaggttcattcaattaatgatgtatgtggtttatatt 15966714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 15966780 - 15966724
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||| | ||||||||||||||  |||||| ||||||||||||||    
T  15966780 tccgtttttaaatataaataaaattgactttttaggttcattcaattaatgatgtat 15966724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 34148081 - 34148009
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||| |||||||||| || || | ||||||  ||||||||||||||||||||| |||| ||||||    
T  34148081 tccatccgttttaaaatataagtaaattttattttttaggttcatttaattaatgatgtatgtgatctatatt 34148009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 43585636 - 43585576
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||  ||||| ||||||||  |||||| ||||||||||||||    
T  43585636 tccatccgtttttaaatataagcaaaatttactttttaggttcattcaattaatgatgtat 43585576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 3161363 - 3161297
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||  || || ||||||||  |||||| ||||||||||||||||| ||||||    
T  3161363 tccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatatggtttata 3161297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 8408925 - 8408872
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||  ||||||||||||||| |||||| | ||||||||||||    
T  8408925 gtttttaaatataagcaaaattgactttttaaattcattcatttaatgatgtat 8408872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 16018518 - 16018567
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatg 228  Q
    ||||||||||||||| ||||||||||||||  |||||||| |||||||||    
T  16018518 tttttaaatataagtaaaattgactttttaggttcatttatttaatgatg 16018567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 14064813 - 14064869
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| || || ||||||||  |||||| ||||||||||||||    
T  14064813 tccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtat 14064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 14416545 - 14416477
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||  |||||||||  || || ||||||||  ||||||||||||||||||||| |||||||||    
T  14416545 catccgtttcaaaatataagcaaattttactttttacgttcatttaattaatgatgtatgtgatttata 14416477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 15385817 - 15385877
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||| |||||||||  || || ||||||||| |||||| ||||||||||||||    
T  15385817 tccatccgttttaaaatataagcaaattttactttttaagttcattcaattaatgatgtat 15385877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 23042099 - 23042043
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| ||||||||  |||||| ||||||||||||||    
T  23042099 tccgtttttaaatataagcaaaatttactttttaggttcattgaattaatgatgtat 23042043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 28803189 - 28803133
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| || ||||||  ||||||||||||||| |||||| ||||||||||||||    
T  28803189 tccgttttaaattataaggaaaattgactttttaaattcattaaattaatgatgtat 28803133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 31690976 - 31691044
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||| ||| ||||||||  ||||||||||||||| |||||| | ||||||||||||||| || |||||    
T  31690976 tccgtattttaatataagcaaaattgactttttaagttcattcatttaatgatgtatatggttcatatt 31691044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 32146968 - 32146908
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||| ||||||| ||||||  |||||| | ||||||||||||    
T  32146968 tccatccgtttctaaatataagtaaaattgattttttaggttcattcatttaatgatgtat 32146908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 34186492 - 34186436
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||| ||||||  |||||| ||||||||||||||    
T  34186492 tccgtttttaaatataagcaaaattgagtttttaggttcattcaattaatgatgtat 34186436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 36337871 - 36337815
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| ||||||||| |||||| | ||||||||||||    
T  36337871 tccgtttttaaatataagcaaaattcactttttaagttcattcatttaatgatgtat 36337815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 36441098 - 36441162
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||| |||||||||| || || ||||||||  ||||||||| |||||||||||||| ||||||    
T  36441098 cgttttaaaatataagtaaattttactttttaggttcatttaaataatgatgtatatggtttata 36441162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 37554346 - 37554406
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| | ||||||||||| || || ||||||||| |||||| ||||||||||||||    
T  37554346 tccatccgtctctaaatataagtaaattttactttttaagttcattcaattaatgatgtat 37554406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 38404151 - 38404207
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||| ||||||| ||||||  |||||||| ||||||||||||    
T  38404151 tccgtctttaaatataagtaaaattgattttttaggttcatttatttaatgatgtat 38404207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 22473945 - 22473996
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgta 230  Q
    ||||||||||||| | ||||||||||||||  |||||||| |||||||||||    
T  22473945 tttttaaatataaataaaattgactttttaggttcatttatttaatgatgta 22473996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 32146830 - 32146885
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgta 230  Q
    ||||||||||||||||||  ||||| ||||||||  |||||||| |||||||||||    
T  32146830 tccgtttttaaatataagcaaaatttactttttaggttcatttatttaatgatgta 32146885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 36346792 - 36346851
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||| |||||||||| || || ||||||||  |||||| |||||||||||||||||    
T  36346792 tccgttttaaaatataagtaaattttactttttaggttcattcaattaatgatgtatatg 36346851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 36964242 - 36964289
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||| ||||||||||||||  |||||| ||||||||||||||    
T  36964242 aaatataagtaaaattgactttttaggttcattcaattaatgatgtat 36964289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 4151292 - 4151234
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatat 233  Q
    ||||||| |||||| |||| ||||||||||||||  |||||| |||||||||| |||||    
T  4151292 tccgtttctaaatacaagtaaaattgactttttaggttcattcaattaatgatatatat 4151234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 5787482 - 5787548
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||| ||||||||||||  ||||||||||||||| |||||| | |||||| ||||| || ||||||    
T  5787482 tccgtctttaaatataagcaaaattgactttttaagttcattcatttaatggtgtatgtggtttata 5787548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 14064947 - 14064885
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||||||||||||||||  ||| | ||||||||  |||||| |||||||||||||| |||||    
T  14064947 tccgtttttaaatataagcaaaaattactttttagattcattcaattaatgatgtatgtgatt 14064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 33677195 - 33677249
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgt 229  Q
    ||||| ||||||||||||| ||||||| ||||||  |||||||| ||||||||||    
T  33677195 tccgtctttaaatataagtaaaattgaatttttagattcatttatttaatgatgt 33677249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 37915751 - 37915809
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| |||| |||||||||| ||||| ||||||||| |||||| | ||||||||||||    
T  37915751 catccattttaaaatataagtaaaattcactttttaagttcattcatttaatgatgtat 37915809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 38507987 - 38507937
Alignment:
Q  181 tttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||  ||||||||||||||| ||||||||  |||||||||||    
T  38507987 tttaaatataagcaaaattgactttttaagttcatttatctaatgatgtat 38507937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 40914244 - 40914194
Alignment:
Q  181 tttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||  ||||||||||||||  |||||||| ||||||||||||    
T  40914244 tttaaatataagcaaaattgactttttaggttcatttatttaatgatgtat 40914194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 5787617 - 5787560
Alignment:
Q  174 atccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||| ||||||||||||  ||||||| ||||||  |||||||| ||||||||||||    
T  5787617 atccgtctttaaatataagcaaaattgaatttttaggttcatttatttaatgatgtat 5787560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 8694482 - 8694547
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||| ||||||||||  ||||||||||||||  |||||| | ||||| |||||| ||||    
T  8694482 tccatccgtttctaaatataagcaaaattgactttttagattcattcatttaataatgtatgtgat 8694547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 12165398 - 12165353
Alignment:
Q  198 ttgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||| ||||||  |||||| ||||||||||||||||||||||||||    
T  12165398 ttgattttttaggttcattcaattaatgatgtatatgatttatatt 12165353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 21152600 - 21152657
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||| || || ||||||||  |||||| |||||||||||||| |||||||||    
T  21152600 aaatataagtaaattttactttttaggttcattcaattaatgatgtatgtgatttata 21152657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 21159735 - 21159792
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||| || || ||||||||  |||||| |||||||||||||| |||||||||    
T  21159735 aaatataagtaaattttactttttaggttcattcaattaatgatgtatgtgatttata 21159792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 21163542 - 21163599
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||| || || ||||||||  |||||| |||||||||||||| |||||||||    
T  21163542 aaatataagtaaattttactttttaggttcattcaattaatgatgtatgtgatttata 21163599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 35469530 - 35469477
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  35469530 gtttttaaatataagcaaaattgactttttacgttcattcatttaatgatgtat 35469477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 1723246 - 1723314
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||| | |||||||||  || |||| ||||||  ||||||||||||||||||||| || ||||||||    
T  1723246 tccgttctaaaatataagcaaatttgattttttaggttcatttaattaatgatgtatgtggtttatatt 1723314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 3780983 - 3781039
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  3780983 tccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 3781039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8694620 - 8694564
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| |||||||||   ||||||||||||||  |||||||| ||||||||||||    
T  8694620 tccgtttctaaatataaacaaaattgactttttaggttcatttatttaatgatgtat 8694564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8959922 - 8959866
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||| ||||||||  |||||| | ||||||| ||||    
T  8959922 tccgtttttaaatataagtaaaattaactttttaggttcattcatttaatgaggtat 8959866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 9742803 - 9742755
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  9742803 taaatataagtaaaattgactttttatgttcattcatttaatgatgtat 9742755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 11784415 - 11784355
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||  || || ||||||||| |||||| |||||||||||||| |||| ||||||    
T  11784415 taaatataagcaaattttactttttaagttcattcaattaatgatgtatgtgatgtatatt 11784355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 13359164 - 13359220
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  13359164 tccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtat 13359220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 13461553 - 13461609
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  13461553 tccgtatttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 13461609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 13461687 - 13461631
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  13461687 tccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtat 13461631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 15385947 - 15385891
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||  || || ||||||||| |||||| ||||||||||||||    
T  15385947 tccgttttaaaatataagcaaattttactttttaagttcattcaattaatgatgtat 15385891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 18475413 - 18475365
Alignment:
Q  195 aaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||| ||||||||| ||||||| || |||||||||| |||||||||||    
T  18475413 aaatttactttttaaattcatttgatgaatgatgtatctgatttatatt 18475365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 20361980 - 20362036
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  || || ||||||||  |||||| ||||||||||||||    
T  20361980 tccgtttttaaatataagcaaattttactttttagattcattcaattaatgatgtat 20362036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 21344586 - 21344530
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  21344586 tccgtctttaaatataagcaaaattgactttttagattcattcatttaatgatgtat 21344530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 22584373 - 22584313
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||| |||||||||||||||  || || ||||||||  |||||| ||||||||||||||    
T  22584373 tccatctgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtat 22584313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 26395169 - 26395225
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||  |||||||||| ||||| ||||||||  |||||||| ||||||||||||    
T  26395169 tccgtttcaaaatataagtaaaattcactttttaggttcatttatttaatgatgtat 26395225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 26395290 - 26395234
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||  |||||||||| ||||| ||||||||  |||||||| ||||||||||||    
T  26395290 tccgtttcaaaatataagtaaaattcactttttaggttcatttatttaatgatgtat 26395234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 34102078 - 34102134
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| | ||||||  |||||| ||||||||||||||    
T  34102078 tccgtttttaaatataagcaaaatttattttttaggttcattgaattaatgatgtat 34102134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 36964367 - 36964311
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||| |||||   |||||| ||||| ||||||||    
T  36964367 tccgtttttaaatataagtaaaattgaattttttgattcattcaattagtgatgtat 36964311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 37684969 - 37685029
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| | ||||||||||  || || ||||||||| |||||| ||||||||||||||    
T  37684969 tccatccgtctctaaatataagcaaattttactttttaagttcattcaattaatgatgtat 37685029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 38860937 - 38860881
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||| |||||   |||||| ||||||||||||||    
T  38860937 tccgtttttaaatataagcaaaattgatttttttggttcattcaattaatgatgtat 38860881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 39916288 - 39916344
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||| || || ||||||||  |||||||||||| ||||||||    
T  39916288 tccgtttctaaatataagtaaattttactttttagattcatttaattattgatgtat 39916344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 40428461 - 40428513
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||||||||||  ||||||||||||||  |||||||| | ||||||    
T  40428461 tccgtttttaaatataagcaaaattgactttttagattcatttattcaatgat 40428513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 41062608 - 41062556
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||| |||| ||||||||||||||| |||||| | ||||| ||||||    
T  41062608 tttttaaatacaagtaaaattgactttttaagttcattcatttaataatgtat 41062556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 42922460 - 42922420
Alignment:
Q  203 tttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||| ||||||||||||||||| ||| |||||||||||    
T  42922460 tttttaaattcatttaattaatgatatatttgatttatatt 42922420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 43176254 - 43176322
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||| ||| ||||||||| ||||||| ||||||  |||||| | ||||||||||||||| || |||||    
T  43176254 tccgtattttaatataagtaaaattgattttttaggttcattcatttaatgatgtatatggttcatatt 43176322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 42795929 - 42796020
Alignment:
Q  64 ggaacaagtttccataaatgataatttagaaattataattatattttttataactttaaaagaaataaatgacacaaactaattttgttaaa 155  Q
    ||||||||||  |||  |||||||||||||||||| |||| |||||||||||| ||| | ||||||||||||||| |||||||||| |||||    
T  42795929 ggaacaagttctcatggatgataatttagaaattacaattgtattttttataattttgagagaaataaatgacaccaactaattttcttaaa 42796020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 5718009 - 5717941
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||| || ||||||||    
T  5718009 tccgtttttaaatataagtaaaattgactttttaaatttattttattaatgatgtatgtggtttatatt 5717941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 29573955 - 29573883
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||||||| ||| ||| ||||||  ||||||||||||||||||||| || ||||||||    
T  29573955 tccatccgtttttaaatataagtaaaagtgattttttaggttcatttaattaatgatgtatgtggtttatatt 29573883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 33425438 - 33425366
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||| | |||||||||||| ||||| |||||    
T  33425438 tccatccgtttttaaatataagcaaaattgactttttaaattcattcatttaatgatgtatgtgattcatatt 33425366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 34438744 - 34438809
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||| ||||||||||| ||||||||||| ||  |||||| |||||||||||||||||||    
T  34438744 tccatccgtttctaaatataagtaaaattgactttctagattcattcaattaatgatgtatatgat 34438809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 5773905 - 5773849
Alignment:
Q  185 aatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  5773905 aatataagtaaaattgactttttaagttcatttatttaatgatgtatatggtttata 5773849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 29573817 - 29573875
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatat 233  Q
    ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||||||||    
T  29573817 tccgtttttaaatataagcaaaattgactttttagattcattaaattaatgatgtatat 29573875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 4101951 - 4102007
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  4101951 tccgtttttaaatataagtaaaattgactttttaggttcattcatttaatgatgtat 4102007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 41823745 - 41823812
Alignment:
Q  176 ccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||| |||| |||||||  | ||| |||||||| ||||||||||||||||||||| |||||||||||    
T  41823745 ccgttcttaattataagtatatttgtctttttaaattcatttaattaatgatgtatttgatttatatt 41823812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 9436557 - 9436495
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||||||||||||||  | || |||||||||||  ||||||||||||||||||||| |||||    
T  9436557 tccgtttttaaatatagataaatttgactttttatattcatttaattaatgatgtatgtgatt 9436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 19906397 - 19906299
Alignment:
Q  64 ggaacaagtttccataaatgataatttagaaattataattatatttttt-ataactttaaaagaaataaatgacacaaactaattttgttaaagggtgt 161  Q
    ||||||||||  || ||| | |||||||||||||  |||| |||||||| |||||||| | |||||||||| |||| |||||||||| ||||| |||||    
T  19906397 ggaacaagttcgcacaaagggtaatttagaaattgcaattgtatttttttataactttgagagaaataaataacaccaactaattttcttaaaaggtgt 19906299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 19250251 - 19250198
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatg 228  Q
    ||||||||||||||||||| |||||| |||||||  |||||||| |||||||||    
T  19250251 tccgtttttaaatataagtaaaattggctttttaggttcatttatttaatgatg 19250198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 37980729 - 37980672
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatg 228  Q
    |||||| |||||| | ||||||| ||||||||||||||  ||||||||||||||||||    
T  37980729 tccatctgtttttcattataagtaaaattgactttttaggttcatttaattaatgatg 37980672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 2795321 - 2795369
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  2795321 taaatataagtaaatatgactttttaaattcatttaattaatgatgtat 2795369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 6006685 - 6006741
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||| | ||||||||||||||  |||||| | ||||||||||||    
T  6006685 tccgtttttaaatataaataaaattgactttttagattcattgatttaatgatgtat 6006741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 30202483 - 30202555
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||| ||||||||||||||||  || |||||||||||  |||||| ||| |||||||||| ||||| |||||    
T  30202483 tccattcgtttttaaatataagcaaatttgactttttaggttcattcaatcaatgatgtatgtgattcatatt 30202555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 42263152 - 42263084
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||| ||| |||||  ||||| | ||||||| |||||||| ||||||||||||||||| ||||||    
T  42263152 tccgttttaaaacataagcaaaattcattttttaagttcatttatttaatgatgtatatgatctatatt 42263084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 42579022 - 42579078
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||| | || || ||||||||| |||||||||||||||||||||    
T  42579022 tccgtttctaaatataaataaattttactttttaaattcatttaattaatgatgtat 42579078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 3463281 - 3463226
Alignment:
Q  181 tttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||||| ||||||||||||||  |||||| | |||||||||||| ||||    
T  3463281 tttaaatataagtaaaattgactttttaggttcattcatttaatgatgtatgtgat 3463226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 5094843 - 5094902
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||| ||||||||  ||||||||||||||  |||||| | |||||||||||||||    
T  5094843 tccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtatatg 5094902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 20556591 - 20556650
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||||||||  ||||||||||||||  |||||| | |||||||||||| ||||    
T  20556591 cgtttttaaatataaggaaaattgactttttacgttcattgatttaatgatgtatgtgat 20556650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 4898168 - 4898234
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||| ||||||||||  || || ||||||||  |||||| |||||||||||||| |||||||||    
T  4898168 tccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtgatttata 4898234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 4945562 - 4945628
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||| ||||||||||  || || ||||||||  |||||| |||||||||||||| |||||||||    
T  4945562 tccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtgatttata 4945628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 12440633 - 12440699
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||  || || ||| ||||| |||||| ||||| |||||||| |||||||||    
T  12440633 tccgtttttaaatataagcaaattttactctttaagttcattcaattattgatgtatgtgatttata 12440699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 20195292 - 20195354
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    |||||||| |||||||||| || || ||||||||  |||||| |||||||||||||| |||||    
T  20195292 tccgttttaaaatataagtaaattttactttttagattcattcaattaatgatgtatgtgatt 20195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 24156602 - 24156652
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgt 229  Q
    ||||||||||||||   |||| |||||||||||||||| ||||||||||||    
T  24156602 tttttaaatataagaagaatttactttttaatttcattgaattaatgatgt 24156652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 25668548 - 25668482
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||| ||||||||||  || || ||||||||  ||||||||||||||||||||| || ||||||    
T  25668548 tccgtttctaaatataagcaaattttactttttaggttcatttaattaatgatgtatgtggtttata 25668482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 30905261 - 30905195
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||  |||||||||| || || ||||||||| |||||| |||||||||||||| || ||||||    
T  30905261 tccgtttcaaaatataagtaaattttactttttaagttcattcaattaatgatgtatgtggtttata 30905195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 42230525 - 42230591
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | |||||||||||| || ||||||    
T  42230525 tccgtctttaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtggtttata 42230591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 8079481 - 8079420
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||||||||| | ||||||| ||||||  || ||||| |||||||||||| ||||    
T  8079481 tccgtttttaaatataaataaaattgattttttaggtttatttatttaatgatgtatgtgat 8079420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 18461511 - 18461454
Alignment:
Q  175 tccgtttttaaat-ataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||| |||||| ||||||| |||||| ||||||| ||||||||||||||    
T  18461511 tccgtttctaaattataagtaaaattgattttttagtttcattcaattaatgatgtat 18461454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 35567275 - 35567230
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaat 220  Q
    ||||||||||||||||||| ||||||| ||||||  ||||||||||    
T  35567275 tccgtttttaaatataagtaaaattgattttttagattcatttaat 35567230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 324799 - 324855
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  || || ||||||||| |||||| ||||||||||||||    
T  324799 tccgtttctaaatataagcaaattttactttttaagttcattcaattaatgatgtat 324855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 9419398 - 9419458
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||  |||||||||||| ||||| | ||||||| |||||| | ||||||||||||    
T  9419398 tccatccgtccttaaatataagtaaaattaattttttaaattcattcatttaatgatgtat 9419458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 10237604 - 10237660
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||| ||||||||||||||  |||||| | ||||| ||||||    
T  10237604 tccgtctttaaatataagtaaaattgactttttaggttcattcatttaataatgtat 10237660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 11342071 - 11342039
Alignment:
Q  211 ttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||||||||||||||||||| ||||    
T  11342071 ttcatttaattaatgatgtatatgatttttatt 11342039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 13477197 - 13477241
Alignment:
Q  187 tataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||||||  ||||||||||||||| |||||    
T  13477197 tataagtaaaattgactttttagattcatttaattaatgttgtat 13477241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 18967361 - 18967305
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||| | |||||||||||||   |||||| | ||||||||||||    
T  18967361 tccgtttttaaatataactaaaattgactttttttgttcattcatttaatgatgtat 18967305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 19906463 - 19906419
Alignment:
Q  5 catatttaaagttataattcataaattacccttcaattaatgtga 49  Q
    |||||||||||||||  ||| |||||||||||||||||| |||||    
T  19906463 catatttaaagttattcttcttaaattacccttcaattagtgtga 19906419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 20128877 - 20128825
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||| || || | ||||||  |||||||||||||||||||||    
T  20128877 tttttaaatataagtgaattttattttttaggttcatttaattaatgatgtat 20128825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 30202621 - 30202565
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||| ||||||||||  |||||| ||||||||||||||    
T  30202621 tccgtttctaaatataagcaaaactgactttttaggttcattcaattaatgatgtat 30202565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 32346080 - 32346140
Alignment:
Q  175 tccgtttttaaatataagttaaa-ttgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||||||||||||   ||| |||||||||||  |||||| |||||||||||||||||    
T  32346080 tccgtttttaaatataaaaaaaaattgactttttagattcattcaattaatgatgtatatg 32346140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 33363696 - 33363640
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  33363696 tccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 33363640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 35607418 - 35607474
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||  |||||||||| || |||||||||||  |||||| ||||||||||||||    
T  35607418 tccgtttcaaaatataagtaaatttgactttttaggttcattcaattaatgatgtat 35607474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 36490620 - 36490560
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||  || || ||||||||  |||||| ||||||||||||||    
T  36490620 tccatccgtttctaaatataagcaaattttactttttaggttcattcaattaatgatgtat 36490560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 37354879 - 37354939
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||| ||||||||||||||   ||||||||||||||  |||||| | ||||||||||||    
T  37354879 tccatctgtttttaaatataaacaaaattgactttttagattcattcacttaatgatgtat 37354939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 37396243 - 37396275
Alignment:
Q  211 ttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||| ||||||||||||||||||||||||||    
T  37396243 ttcattcaattaatgatgtatatgatttatatt 37396275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 38262004 - 38262056
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    |||||||||| || |||||||||||  |||||| |||||||||||||| ||||    
T  38262004 aaatataagtaaatttgactttttaggttcattcaattaatgatgtatgtgat 38262056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 38721515 - 38721471
Alignment:
Q  180 ttttaaatataagttaaattgactttttaatttcatttaattaat 224  Q
    |||||||||||||  ||||||||||||||| |||||| |||||||    
T  38721515 ttttaaatataagcaaaattgactttttaaattcattcaattaat 38721471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 42230659 - 42230603
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  42230659 tccgttttttaatataagcaaaattgactttttatgttcattcatttaatgatgtat 42230603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 42579152 - 42579100
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||| || || ||||||||  |||||| ||||||||||||||    
T  42579152 tttttaaatataagtaaattttactttttagattcattcaattaatgatgtat 42579100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 42755150 - 42755094
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| |||||||||||   ||||| |||||||||||||||| | ||||||||||||    
T  42755150 tccgtctttaaatataaacaaaattaactttttaatttcattcatttaatgatgtat 42755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 43514897 - 43514825
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||  |||||||||  || || ||||||||  |||||| ||||||||||||||||| | ||||||    
T  43514897 tccatccgtttcaaaatataagcaaattttactttttaggttcattcaattaatgatgtatatggtctatatt 43514825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 44949345 - 44949401
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  44949345 tccgtttctaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 44949401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 44949479 - 44949423
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| | ||||||| |||||| | ||||||||||||    
T  44949479 tccgtttttaaatataagcaaaatttattttttaagttcattcatttaatgatgtat 44949423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 45810314 - 45810380
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||| |||||||||||    
T  45810314 cgtttttaaatataagtaaaattgacttagtaaattcatttaattaatgatgtatctgatttatatt 45810380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 1358175 - 1358231
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  1358175 tccgttattaaatataagtaaaattgactttttaagtacatttaattaatgatgtat 1358231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 24478802 - 24478736
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||  || || ||||||||| ||||||||||||||||||||| || ||||||    
T  24478802 tccgtttttaaatataagcaaattttactttttaagttcatttaattaatgatgtatgtggtttata 24478736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 34599001 - 34598931
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||| || ||||||| || |||||||||||  |||||| |||||||||||||||||||| |||||    
T  34599001 catccgttttcaattataagtaaatttgactttttagattcattcaattaatgatgtatatgattcatatt 34598931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 24023502 - 24023445
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtata 232  Q
    ||||||||||||||||||  ||||| ||||||||  ||||||||||||||||||||||    
T  24023502 tccgtttttaaatataagcaaaattaactttttaggttcatttaattaatgatgtata 24023445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 26856110 - 26856054
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||| |||||||| ||||||||||||||  |||||||| ||||||||||||    
T  26856110 tccgtttttatatataagtaaaattgactttttaggttcatttatttaatgatgtat 26856054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 40907182 - 40907238
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||||||||||||||  |||||||||||||||||||||    
T  40907182 tccgtttctaaatataagaaaaattgactttttacgttcatttaattaatgatgtat 40907238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 1344371 - 1344430
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||| ||||||||||||| ||||| ||||||||  |||||||| |||||||||||||||    
T  1344371 tccgtctttaaatataagtaaaattaactttttaggttcatttatttaatgatgtatatg 1344430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 2091749 - 2091808
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||| |||||||||| || |||||||||||  |||||| |||||||||||||||||    
T  2091749 tccgttttaaaatataagtaaatttgactttttaggttcattcaattaatgatgtatatg 2091808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 49753090 - 49753145
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgta 230  Q
    ||||||||||||||||||| || || ||||||||  ||||||||||||||||||||    
T  49753090 tccgtttttaaatataagtaaattttactttttaggttcatttaattaatgatgta 49753145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 17622762 - 17622824
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatat 233  Q
    ||||||||| ||||||||||||  ||||||||||||||  |||| | ||||||||||||||||    
T  17622762 tccatccgtctttaaatataagcaaaattgactttttagattcactaaattaatgatgtatat 17622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 29688529 - 29688475
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||| ||||||||||||||||||||||||||| || ||| | ||||||||    
T  29688529 catccgtttctaaatataagttaaattgactttttaaatttattcatttaatgat 29688475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 38847439 - 38847373
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | |||||||||||| || ||||||    
T  38847439 tccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggtttata 38847373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 45011489 - 45011547
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||| | ||||| ||||||    
T  45011489 catccgtctttaaatataagtaaaattgattttttaatttcattcatttaataatgtat 45011547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 51245355 - 51245424
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatat 242  Q
    ||||||||||||||||||||| ||||| ||||||||  || ||||| |||||||| ||| ||||| ||||    
T  51245355 catccgtttttaaatataagtaaaatttactttttaggtttatttatttaatgatatatgtgattaatat 51245424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 7230012 - 7230068
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| ||||||||  |||||| ||||||||||||||    
T  7230012 tccgtttttaaatataagcaaaattaactttttagattcattcaattaatgatgtat 7230068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 7230196 - 7230140
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||| |||  ||||||| ||||||| |||||| ||||||||||||||    
T  7230196 tccgtttttaaatacaagcaaaattgattttttaagttcattcaattaatgatgtat 7230140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 12062197 - 12062249
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||    
T  12062197 tccgtttttaaatataaggaaaattgactttttaggttcattcaattaatgat 12062249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 21852436 - 21852492
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    |||||| |||||||||||||||  ||||||||||||||  |||||| ||||||||||    
T  21852436 tccatcggtttttaaatataagcaaaattgactttttaggttcattcaattaatgat 21852492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 27146161 - 27146105
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  27146161 tccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 27146105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 32067563 - 32067623
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||| || || || |||||| || ||| ||||||||||||||    
T  32067563 tccatccgtttttaaatataagtaaattttaccttttaagtttattcaattaatgatgtat 32067623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 34038057 - 34038001
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| || |||||||||| ||||||||||||||  |||||| ||||||||||||||    
T  34038057 tccgtattaaaatataagtaaaattgactttttaggttcattcaattaatgatgtat 34038001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 42761370 - 42761314
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||| ||||| ||||||||| |||||| | ||||||||||||    
T  42761370 tccgttttaaaatataagtaaaatttactttttaagttcattcatttaatgatgtat 42761314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 48636855 - 48636787
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||| |||| ||||||| || |||||||||||  |||||| | |||||||||||| |||||||||||    
T  48636855 tccgttcttaattataagtcaatttgactttttaggttcattcagttaatgatgtatttgatttatatt 48636787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 6792374 - 6792425
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatga 226  Q
    ||||||||||||||||||  ||||||||||||||  |||||||| |||||||    
T  6792374 tccgtttttaaatataagcaaaattgactttttagattcatttatttaatga 6792425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 17387658 - 17387709
Alignment:
Q  180 ttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  17387658 ttttaaatataagtaaaattgactttttaggttcattcatttaatgatgtat 17387709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 34332949 - 34333020
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatattt 244  Q
    ||||| ||| |||||||||   ||||||||||||||| |||||| |||||||||||||| || || ||||||    
T  34332949 catccctttctaaatataaacaaaattgactttttaagttcattcaattaatgatgtatgtggttcatattt 34333020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 46830363 - 46830268
Alignment:
Q  64 ggaacaagtttccataaatgataatttagaaattataattatattttttataactttaaaagaaataaatgacacaaactaattttgttaaagggt 159  Q
    ||||||||||  ||| || ||| ||||| ||| ||||||| |||  ||||||| ||| |||||||||||||| |  |||||||||| |||||||||    
T  46830363 ggaacaagttctcatgaaggatcatttaaaaagtataattgtatcctttataattttgaaagaaataaatgatatcaactaatttttttaaagggt 46830268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 9947885 - 9947835
Alignment:
Q  181 tttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  9947885 tttaaatataagtaaaattgactttttagattcattcatttaatgatgtat 9947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 16426911 - 16426973
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||||| ||||||||||  ||||||||||||||  |||||| | |||||||||||| |||||    
T  16426911 tccgtttctaaatataagcaaaattgactttttagattcattcatttaatgatgtatgtgatt 16426973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 47011377 - 47011315
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||  || || ||||||||  |||||| |||||||||||||| |||||||||    
T  47011377 tttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatgtgatttata 47011315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 52253541 - 52253607
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||| ||||||||||  || || ||||||||  |||||| |||||||||||||| |||||||||    
T  52253541 tccgtttctaaatataagcaaattttactttttatattcattcaattaatgatgtatgtgatttata 52253607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 3140950 - 3141015
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||| ||||| || || | ||||||  ||||||||||||||||||||| || ||||||||    
T  3140950 gtttttaaatttaagtaaattttaatttttaggttcatttaattaatgatgtatgtggtttatatt 3141015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 4683071 - 4683018
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||| | |||||||||||||   |||||| ||||||||||||||    
T  4683071 gtttttaaatataaataaaattgacttttttggttcattcaattaatgatgtat 4683018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 6169948 - 6169891
Alignment:
Q  175 tccgtttttaaatataagttaaattgacttttt-aatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||| | ||||||| ||||| || |||||| ||||||||||||||    
T  6169948 tccgtttttaaatataaataaaattgatttttttaagttcattcaattaatgatgtat 6169891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 8552029 - 8552074
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatt 216  Q
    ||||||| ||||||||||||||| ||||||| ||||||| ||||||    
T  8552029 tccatccatttttaaatataagtaaaattgattttttaagttcatt 8552074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 15285379 - 15285318
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    |||||||||||||||||   ||||||||||||||  |||||| | |||||||||||| ||||    
T  15285379 tccgtttttaaatataaacaaaattgactttttaggttcattcatttaatgatgtatgtgat 15285318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 37215309 - 37215248
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||| |||| |||  ||||||||||||||  |||||||| |||||||||||| ||||    
T  37215309 tccgttttttaatacaagcaaaattgactttttaggttcatttatttaatgatgtatgtgat 37215248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 48376805 - 48376854
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaat 224  Q
    |||||||| |||||||||| || |||||||||||| || |||||||||||    
T  48376805 tccgttttaaaatataagtaaatttgactttttaaatttatttaattaat 48376854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 52253675 - 52253622
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatg 228  Q
    ||||||||||||||||||| || || | ||||||| |||||| |||||||||||    
T  52253675 tccgtttttaaatataagtaaattttattttttaaattcattcaattaatgatg 52253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 3141054 - 3141022
Alignment:
Q  214 atttaattaatgatgtatatgatttatatttta 246  Q
    ||||||||||||||||||||| |||||||||||    
T  3141054 atttaattaatgatgtatatggtttatatttta 3141022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 4523075 - 4523019
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||| ||||||| ||| ||  |||||| ||||||||||||||    
T  4523075 tccgtttttaattataagtaaaattgattttctaggttcattcaattaatgatgtat 4523019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 4974182 - 4974126
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  4974182 tccgttttttaatataagcaaaattgactttttagattcattcatttaatgatgtat 4974126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 10008824 - 10008880
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||| ||||||| ||||||  |||||| | ||||||||||||    
T  10008824 tccgtttctaaatataagtaaaattgattttttaggttcattcatttaatgatgtat 10008880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 10008958 - 10008902
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  |||||||  |||||  |||||||| ||||||||||||    
T  10008958 tccgtttttaaatataagcaaaattgatgttttaggttcatttatttaatgatgtat 10008902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 12062335 - 12062275
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||||||  ||||| | ||||||  |||||| ||||||||||||||    
T  12062335 tccatccttttttaaatataagccaaatttattttttaggttcattgaattaatgatgtat 12062275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 21909840 - 21909900
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||| ||||||||| || || ||||||||  || ||| ||||||||||||||    
T  21909840 tccatccgtttttgaatataagtaaattttactttttaggtttattcaattaatgatgtat 21909900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 26855976 - 26856032
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  |||||||| |||||| |||||||| ||||| ||||||    
T  26855976 tccgtctttaaatataagaaaaattgaccttttaagttcatttatttaataatgtat 26856032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 34662408 - 34662476
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||  |||||||||  ||||| ||||||||  |||||| | |||||||||||| |||||||||||    
T  34662408 tccgtttcaaaatataagcaaaattcactttttaggttcattcatttaatgatgtatgtgatttatatt 34662476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 35050043 - 35050003
Alignment:
Q  201 actttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||| ||||||| |||||||||| |||||||||||||    
T  35050043 actttttagtttcattcaattaatgatatatatgatttata 35050003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 35838859 - 35838799
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||  |||||||||  ||||| ||||||||  |||||||| ||||||||||||    
T  35838859 tccatccgtttcaaaatataagcaaaattcactttttaggttcatttatttaatgatgtat 35838799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 38824290 - 38824350
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||  || || | ||||||  |||||| ||||||||||||||    
T  38824290 tccatccgtttttaaatataagcaaattttattttttatgttcattcaattaatgatgtat 38824350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 39940513 - 39940557
Alignment:
Q  198 ttgactttttaatttcatttaattaatgatgtatatgatttatat 242  Q
    |||||||||||  |||||||||| ||||||||||||| |||||||    
T  39940513 ttgactttttaggttcatttaataaatgatgtatatggtttatat 39940557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 43738706 - 43738674
Alignment:
Q  211 ttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||||||||||||||||||| ||||    
T  43738706 ttcatttaattaatgatgtatatgatttttatt 43738674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 47912575 - 47912631
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  47912575 tccgtttctaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 47912631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 50008899 - 50008967
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||| ||||||||| |||||||||||||   |||||| | |||||||||| |||| || |||||    
T  50008899 tccgttttttaatataagtaaaattgacttttttgattcattcatttaatgatgtgtatggttcatatt 50008967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 52880044 - 52879996
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| || |||||||||||  |||||| ||||||||||||||    
T  52880044 taaatataagtaaatttgactttttaggttcattcaattaatgatgtat 52879996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 3212244 - 3212312
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||| ||||||| ||||||  |||||| |||||||||||||| |||||||||||    
T  3212244 tccgtttttaaatataagtaaaattgaatttttaggttcattcaattaatgatgtatgtgatttatatt 3212312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 8645162 - 8645255
Alignment:
Q  64 ggaacaagtttccataaatgataatttagaaattataattatatttt-ttataactttaaaagaaataaatgacacaaactaattttgttaaag 156  Q
    |||||||||| |||| || | |||||||||||||| |||| |||||| |||||||||| |  |||||||||||||| |||||||||| ||||||    
T  8645162 ggaacaagttcccattaagggtaatttagaaattacaattgtatttttttataactttgagtgaaataaatgacaccaactaattttcttaaag 8645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 31759465 - 31759405
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  31759465 tccatccgtttctaaatataagcaaaattgactttttaagttcattcaattaatgatgtat 31759405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 2693665 - 2693721
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  2693665 tccgtctttaaatataagtaaaattgactttttaggttcatttatttaatgatgtat 2693721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 3343918 - 3343858
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||| ||||||||||||||  |||||| ||||| ||||||||    
T  3343918 tccatccgtttctaaatataagtaaaattgactttttaggttcattcaattattgatgtat 3343858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 7498434 - 7498490
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  7498434 tccgtttttaaatataagtaaaattgactttttaggttcattcatttaatgatgtat 7498490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 13902022 - 13902082
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  13902022 tccatccgtttttaaatataagcaaaattgactttttaggttcattaatttaatgatgtat 13902082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 3418767 - 3418818
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||||| ||||||||||||||  |||||| |||||||||||||||||    
T  3418767 taaatataagtaaaattgactttttaggttcattcaattaatgatgtatatg 3418818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 28737839 - 28737886
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  28737839 aaatataagtaaaattgactttttaaattcattcaattaatgatgtat 28737886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 4156472 - 4156410
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||  ||||||||||||||  |||||| | ||||||||||| ||||||||||    
T  4156472 tttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtacatgatttata 4156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 3418893 - 3418837
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||| ||||||| ||||||    
T  3418893 tccgtttttaaatataagcaaaattgactttttaggttcattcaattaataatgtat 3418837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 4156342 - 4156398
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||| |||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  4156342 tccgcttttaaatataagtaaaattgactttttaggttcattcatttaatgatgtat 4156398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 32364019 - 32364075
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||||   ||||||||||||||| |||||| | ||||||||||||    
T  32364019 tccgtttttaaatataaacaaaattgactttttaaattcattcatttaatgatgtat 32364075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 9908264 - 9908205
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||| || |||||||||||  |||||| |||||||||||||| ||||| |||||    
T  9908264 aaatataagtaaatttgactttttaggttcattcaattaatgatgtatgtgattcatatt 9908205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 10644276 - 10644335
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||  ||||||||||||||  || |||||||||||||||||| ||||| |||||    
T  10644276 aaatataagcaaaattgactttttaggtttatttaattaatgatgtatgtgattcatatt 10644335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 1935837 - 1935783
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||| | ||||||||||||| | |||||| | ||||||||||||    
T  1935837 cgtttttaaatataaataaaattgacttttttaattcattcatttaatgatgtat 1935783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 8785508 - 8785562
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||| ||||||||||||||| || ||| |  |||||||||||    
T  8785508 cgtttttaaatataagtaaaattgactttttaaattaattcatataatgatgtat 8785562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 15467710 - 15467644
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||| ||||||| ||||| | |||| |  |||||| |||||||||||||| |||||||||    
T  15467710 tccgtttttaattataagtaaaatttatttttcagattcattcaattaatgatgtatgtgatttata 15467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 29938355 - 29938409
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  29938355 cgtttttaaatataagcaaaattgactttttagattcattcatttaatgatgtat 29938409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 2343344 - 2343377
Alignment:
Q  175 tccgtttttaaatataagttaaattgacttttta 208  Q
    ||||||||||||||||||| ||||||||||||||    
T  2343344 tccgtttttaaatataagtaaaattgacttttta 2343377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 13853067 - 13853108
Alignment:
Q  195 aaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||||||| |||||| |||||||||||||| ||||    
T  13853067 aaattgactttttaagttcattcaattaatgatgtatgtgat 13853108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 667731 - 667787
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||| ||||||  ||||||  |||||||||||||    
T  667731 tccgtttttaaatataagcaaaattgattttttaggttcattccattaatgatgtat 667787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 2343433 - 2343385
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatga 226  Q
    |||||||||||||||| ||||||||||| ||  |||||||| |||||||    
T  2343433 gtttttaaatataagtaaaattgactttctagattcatttatttaatga 2343385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 3343780 - 3343836
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||| ||| ||||||  |||||| ||||||||||||||    
T  3343780 tccgtttttaaatataagcaaaaatgattttttaggttcattcaattaatgatgtat 3343836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 5433468 - 5433412
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||  || |||||||||||  |||||| ||||||||||||||    
T  5433468 tccgtttttaattataagcaaatttgactttttatgttcattcaattaatgatgtat 5433412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 12349956 - 12349896
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||  |||||||||| ||||| ||||||||  |||||| | ||||||||||||    
T  12349956 tccatccgtttcaaaatataagtaaaatttactttttagattcattcatttaatgatgtat 12349896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 15467588 - 15467644
Alignment:
Q  187 tataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||| || |||||||||||  |||||||||||| |||||||| |||| ||||||    
T  15467588 tataagtaaatttgactttttagattcatttaattattgatgtatgtgatctatatt 15467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 28542337 - 28542389
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||| |||||||||||| |  |||||| | ||||||||||||    
T  28542337 tttttaaatataagtaaaattgacttttaaggttcattcatttaatgatgtat 28542389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 32436269 - 32436325
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||  ||||||  |||||| | ||||||||||||    
T  32436269 tccgtttttaaatataagtaaaattgtttttttaggttcattcatttaatgatgtat 32436325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 13471378 - 13471451
Alignment:
Q  62 acggaacaagtttccataaatgataatttagaaattataattatattttttataactttaaaagaaataaatga 135  Q
    |||||||||||| |||| || | |||||||||||||| |||| || ||||||||||||||| ||||||||||||    
T  13471378 acggaacaagttcccatgaagggtaatttagaaattacaattgtactttttataactttaagagaaataaatga 13471451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 26743259 - 26743198
Alignment:
Q  170 gtccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||| | ||||||||||||    
T  26743259 gtccctccgtttttaaatataagtaaaattgactttttaagttcattcatttaatgatgtat 26743198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 22332434 - 22332366
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||| ||||| || |||||| |||||| |||||||||||||| |||| ||||||    
T  22332434 tccgtttttaaatataagtaaaatttacattttaagttcattgaattaatgatgtatgtgatctatatt 22332366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 48590726 - 48590654
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||  |||||||||| || |||||||||||| |||||| |||||||||||||| ||||| |||||    
T  48590726 tccatccgtttcaaaatataagtaaatttgactttttaagttcattcaattaatgatgtatgtgattcatatt 48590654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 4027359 - 4027293
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||||||||||||||||||||  ||||||| ||||||  |||||| | ||||||||||||||||||    
T  4027359 tccatccgtttttaaatataagcaaaattgaatttttaggttcattcatttaatgatgtatatgatt 4027293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 17882707 - 17882777
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||| |||| |||||||||| || || ||||||||| |||||||||||||||||| || |||||||||    
T  17882707 tccatcccttttaaaatataagtaaattttactttttaagttcatttaattaatgatgcatgtgatttata 17882777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 25250294 - 25250233
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||||||||||| ||||||||||||||  || ||||| |||||||||||| ||||    
T  25250294 tccgtttttaaatataagtaaaattgactttttaggtttatttatttaatgatgtatgtgat 25250233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 13846709 - 13846769
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||| || || ||||||||  |||||| ||||||||||||||    
T  13846709 tccatccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtat 13846769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 24936684 - 24936744
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatga 235  Q
    ||||||||||||||||||  ||||||| ||||||  |||||||| ||||||||||||||||    
T  24936684 tccgtttttaaatataagcaaaattgattttttagattcatttatttaatgatgtatatga 24936744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 35160748 - 35160808
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||  ||||||||||||||  |||||| ||||||||||||||    
T  35160748 tccatccgtttctaaatataagcaaaattgactttttaggttcattcaattaatgatgtat 35160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 42061775 - 42061831
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||||||||||| ||||||||||||||  |||||||| |||||||| ||||||    
T  42061775 gtttttaaatataagtaaaattgactttttaggttcatttatttaatgatatatatg 42061831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 6580508 - 6580570
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||||||||||||||||  |||||||| |||||  |||||| | ||||||||||||||||||    
T  6580508 tccgtttttaaatataagcaaaattgacattttaggttcattcatttaatgatgtatatgatt 6580570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 23735998 - 23736068
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||||||  ||||| ||||||||   || || ||||| ||||||||||||||||||    
T  23735998 tccatccgtttttaaatataagcaaaatttactttttaggatcgttaaattattgatgtatatgatttata 23736068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 31669922 - 31669864
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||||| ||||||||||||||  |||||||| ||||| ||||||    
T  31669922 catccgtttctaaatataagtaaaattgactttttaggttcatttatttaattatgtat 31669864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 4187995 - 4188048
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatg 228  Q
    ||||||||||||||||||| ||||| ||||||||  |||||||| |||||||||    
T  4187995 tccgtttttaaatataagtaaaattcactttttagattcatttatttaatgatg 4188048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 22332300 - 22332361
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||| |||||||||   |||||| |||||||| |||||| |||||||||||||||||||    
T  22332300 tccgtttctaaatataaacaaaattgtctttttaagttcattcaattaatgatgtatatgat 22332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 5082679 - 5082735
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||| |||||| | ||||||||||||    
T  5082679 tccgtctttaaatataagcaaaattgactttttaagttcattcatttaatgatgtat 5082735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 12307824 - 12307876
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||| | ||||||||||||||  |||||||| ||||||||||||    
T  12307824 tttttaaatataaataaaattgactttttagattcatttatttaatgatgtat 12307876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 13471185 - 13471253
Alignment:
Q  93 aaattataattatattttttataactttaaaagaaataaatgacacaaactaattttgttaaagggtgt 161  Q
    |||||| |||| |||||||||||| ||| | |||||||||||||||  | ||||||| |||||||||||    
T  13471185 aaattacaattgtattttttataattttgagagaaataaatgacacctattaatttttttaaagggtgt 13471253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 16100168 - 16100228
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||||||||||||||  ||||||| ||||||  |||||| | ||||||||||||||||||    
T  16100168 cgtttttaaatataagcaaaattgagtttttagattcattcatttaatgatgtatatgatt 16100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 20353056 - 20353116
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||  || || ||||||||  |||||| ||||||||||||||    
T  20353056 tccatccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtat 20353116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 23736128 - 23736080
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  23736128 taaatataagtaaaattaactttttaggttcatttaattaatgatgtat 23736080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 30005879 - 30005935
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| |||||||||||||   |||||| ||||||||| ||||    
T  30005879 tccgtttttaaatataagtaaaattgacttttttggttcattcaattaatgacgtat 30005935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 32389292 - 32389224
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||| || ||  |||||||| |||||| ||| |||||||||| ||||| |||||    
T  32389292 tccgtttttaaatataagtaaattttgctttttaaattcattcaataaatgatgtatgtgattcatatt 32389224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 33784063 - 33784119
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||| || || ||||||||| |||||| ||||||||||||||    
T  33784063 tccgttttaaaatataagtaaattttactttttaaattcattcaattaatgatgtat 33784119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 35160886 - 35160830
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||| ||| ||||||||||    
T  35160886 tccgtttttaaatataagcaaaattgactttttaggttcattcaatgaatgatgtat 35160830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 39728707 - 39728647
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||| || || ||||||||| ||||||| |||||| ||||||    
T  39728707 tccatccgtttctaaatataagtaaattttactttttaagttcatttcattaataatgtat 39728647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 16100299 - 16100244
Alignment:
Q  176 ccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||||  ||||||||||||||| |||||| | ||| ||||||||    
T  16100299 ccgtttttaaatataagcaaaattgactttttaaattcattcatttattgatgtat 16100244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 19673053 - 19672990
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||| || ||||||||||  ||||||| ||||||  |||||||| |||||||||||||||    
T  19673053 tccatccgattctaaatataagcaaaattgattttttaggttcatttatttaatgatgtatatg 19672990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 30006004 - 30005945
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||  ||||||||||||||  |||||| |||||||||||||| ||||| |||||    
T  30006004 aaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtgattcatatt 30005945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 37668059 - 37668004
Alignment:
Q  174 atccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgt 229  Q
    |||||||||||||||||||| || || |||| |||| |||||| ||||||||||||    
T  37668059 atccgtttttaaatataagtaaattttacttcttaaattcattcaattaatgatgt 37668004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 40235166 - 40235103
Alignment:
Q  175 tccgtttttaaatataagttaaattgacttttt-aatttcatttaattaatgatgtatatgatt 237  Q
    |||||||||||||||||   ||||||| ||||| || ||||||||||||||||||||| |||||    
T  40235166 tccgtttttaaatataaacaaaattgaattttttaagttcatttaattaatgatgtatgtgatt 40235103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 41888866 - 41888807
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||| ||||||||  |||||||| |||||| |||||| | |||||||||||||||    
T  41888866 tccgttttttaatataagcaaaattgacattttaaattcattcatttaatgatgtatatg 41888807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 5691613 - 5691547
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||  || || || |||||| |||||| |||||||||||||| || ||||||    
T  5691613 tccgtttttaaatataagcaaattttacattttaaattcattcaattaatgatgtatgtggtttata 5691547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 23092383 - 23092425
Alignment:
Q  201 actttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||    
T  23092383 actttttaagttcatttaattaataatgtatatggtttatatt 23092425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 26154052 - 26153990
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | |||||||||||| |||||    
T  26154052 tccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtgatt 26153990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 31758620 - 31758558
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||||| ||||||||||| || || | ||||||| || |||||||||||||||||| |||||    
T  31758620 tccgtttctaaatataagtaaattttattttttaagtttatttaattaatgatgtatgtgatt 31758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 46221077 - 46221147
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||||| |||||| ||  || || ||||||||| |||||| |||||||||||||| || ||||||    
T  46221077 tccatccgttttaaaatattagcaaattttactttttaagttcattcaattaatgatgtatgtggtttata 46221147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 39728568 - 39728637
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatattt 244  Q
    |||||| | |||||||||  || |||||||||||| |||||| |||| ||||||||| || |||||||||    
T  39728568 tccgttctaaaatataagcaaatttgactttttaagttcattcaattgatgatgtatgtggtttatattt 39728637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 42644204 - 42644163
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatt 216  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||    
T  42644204 tccgtctttaaatataagtaaaattgactttttaagttcatt 42644163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 46578291 - 46578336
Alignment:
Q  198 ttgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||| |||||| |||||||||||||| || ||||||||    
T  46578291 ttgactttttaaattcattcaattaatgatgtatgtggtttatatt 46578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 5212180 - 5212124
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||| ||||| ||||||||  |||||| | ||||||||||||    
T  5212180 tccgttttaaaatataagtaaaattcactttttaggttcattcatttaatgatgtat 5212124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 5639698 - 5639638
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||||||  ||||||||||||||  |||||| | ||||||| ||||    
T  5639698 tccatccgtctttaaatataagcaaaattgactttttagattcattcatttaatgacgtat 5639638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 7208801 - 7208745
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||||||||||||| | |||||| | ||||||||||||    
T  7208801 tccgtttctaaatataagaaaaattgactttttgagttcattcatttaatgatgtat 7208745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 7345035 - 7344979
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  || || |||||||| ||||||| ||||||||||||||    
T  7345035 tccgtttctaaatataagcaaattttactttttagtttcattcaattaatgatgtat 7344979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 10595494 - 10595550
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||| ||||||||| ||||||| ||||||  |||||| ||||||||||||||    
T  10595494 tccgtattttaatataagtaaaattgattttttaggttcattcaattaatgatgtat 10595550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 10595628 - 10595572
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||| ||||||||| ||||||||||||||| |||||| | | ||||||||||    
T  10595628 tccgtattttaatataagtaaaattgactttttaaattcattcattaaatgatgtat 10595572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 11909267 - 11909323
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||  ||||||||||||||| |||||| | |||| |||||||    
T  11909267 tccgttttttaatataagcaaaattgactttttaagttcattcatttaacgatgtat 11909323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 24166274 - 24166318
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||  ||||||||||||||| |||||| ||||||||||    
T  24166274 taaatataagcaaaattgactttttaagttcattcaattaatgat 24166318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 24936818 - 24936762
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||  |||||||| | ||||||||||||||| |||||| | ||||||||||||    
T  24936818 tccgtttcaaaatataaataaaattgactttttaagttcattcagttaatgatgtat 24936762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 28289606 - 28289562
Alignment:
Q  181 tttaaatataagttaaattgactttttaatttcatttaattaatg 225  Q
    ||||| ||||||| ||||||||||||||| |||||| ||||||||    
T  28289606 tttaattataagtaaaattgactttttaagttcattcaattaatg 28289562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 30404964 - 30405024
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||| | |||||||||| || || ||||||||  |||||| ||||||||||||||    
T  30404964 tccatccgttctaaaatataagtaaatttaactttttaggttcattcaattaatgatgtat 30405024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 31671003 - 31671059
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| || || ||||||||  |||||| ||||||| ||||||    
T  31671003 tccgtttttaaatataagtaaattttactttttatgttcattcaattaattatgtat 31671059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 31857036 - 31857092
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| |||||||||||   ||||||| ||||||| |||||||| ||||||||||||    
T  31857036 tccgtctttaaatataatcaaaattgattttttaagttcatttatttaatgatgtat 31857092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 31857211 - 31857151
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||| |||| ||||||||||  ||||||||||||||  |||||||| ||||| ||||||    
T  31857211 tccatcagtttataaatataagcaaaattgactttttaggttcatttatttaataatgtat 31857151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 39976053 - 39976105
Alignment:
Q  181 tttaaatataagttaaattgactttttaatttcatttaattaatgatgtatat 233  Q
    ||||||||||||  ||||||||||||||  |||||| | ||||||||||||||    
T  39976053 tttaaatataagcaaaattgactttttagattcattcatttaatgatgtatat 39976105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 43067023 - 43067083
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||  |||||||||  ||||| ||||||||  |||||| ||||||||||||||    
T  43067023 tccatccgtttcaaaatataagcaaaatttactttttaggttcattcaattaatgatgtat 43067083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 43093554 - 43093498
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| ||||||||  |||||| ||||||| ||||||    
T  43093554 tccgtttttaaatataagcaaaatttactttttaggttcattgaattaattatgtat 43093498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 43232999 - 43232943
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||||||||||  || || ||||||||  |||||| |||||||||||||||||    
T  43232999 gtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtatatg 43232943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 46477270 - 46477214
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||| || || ||||||||  |||||| ||||||||||||||    
T  46477270 tccgttttaaaatataagtaaattttactttttaggttcattcaattaatgatgtat 46477214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 2827359 - 2827415
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||||||||||| |||||| | ||||||||||||    
T  2827359 tccgtttttaaatataagtaaaattgactttttaagttcattcatttaatgatgtat 2827415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 41569638 - 41569572
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||| ||||||||||||  ||||||||||||||| |||||| | |||||||||||| |||||||||    
T  41569638 tccgtctttaaatataagcaaaattgactttttaagttcattcatttaatgatgtatgtgatttata 41569572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 3270577 - 3270630
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgta 230  Q
    ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||    
T  3270577 cgtttttaaatataagtaaaattgactttttaggttcatttatttaatgatgta 3270630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 44838773 - 44838833
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||  ||||||||||||||  || ||| ||||||||||||||    
T  44838773 tccatccgtttttaaatataagcaaaattgactttttagatttattcaattaatgatgtat 44838833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 41177959 - 41178017
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||||| || |||||||||||  |||||| ||||||||||||||    
T  41177959 catccgttcttaaatataagtaaatttgactttttaggttcattcaattaatgatgtat 41178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 9203402 - 9203455
Alignment:
Q  190 aagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||| ||||||||||||||| ||||||  ||||||||||||||||||| |||||    
T  9203402 aagtaaaattgactttttaagttcattcgattaatgatgtatatgattcatatt 9203455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 42149152 - 42149197
Alignment:
Q  198 ttgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||    
T  42149152 ttgactttttaagttcattcaattaatgatgtatgtgatttatatt 42149197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 30245641 - 30245585
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||| ||||| ||||||||  |||||||| ||||||||||||    
T  30245641 tccgttttaaaatataagtaaaattcactttttaggttcatttatttaatgatgtat 30245585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 32032972 - 32033008
Alignment:
Q  195 aaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  32032972 aaattgactttttaatttcattcaattaatgatgtat 32033008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 33570645 - 33570589
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||| ||||| ||||||||  |||||||| ||||||||||||    
T  33570645 tccgttttaaaatataagtaaaattcactttttaggttcatttatttaatgatgtat 33570589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 36308653 - 36308585
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||  |||||||||| ||||| ||||||||  |||||||| |||||||||||| || ||||||    
T  36308653 catccgtttcaaaatataagtaaaattcactttttaggttcatttatttaatgatgtatgtggtttata 36308585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 14228076 - 14228131
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtata 232  Q
    ||||||| ||||||||| ||||||||||||||| |||||  | |||||||||||||    
T  14228076 cgttttttaatataagtaaaattgactttttaaattcatacatttaatgatgtata 14228131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 35063588 - 35063541
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||  ||||||||||||||  |||||||||||||||||||||    
T  35063588 aaatataagcaaaattgactttttaggttcatttaattaatgatgtat 35063541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 1647177 - 1647115
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||| ||| ||||||||| ||||||||||||||  |||||| | |||||||||||| |||||    
T  1647177 tccgtattttaatataagtaaaattgactttttaggttcattcatttaatgatgtatgtgatt 1647115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 26489742 - 26489676
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||| ||||| | ||||||  |||||| ||||||| |||||| || ||||||    
T  26489742 tccgtttttaaatataagtaaaattaattttttaggttcattcaattaattatgtatgtggtttata 26489676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 3611903 - 3611850
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||| ||||||| |||||   |||||| ||||||||||||||    
T  3611903 gtttttaaatataagtaaaattgatttttttggttcattcaattaatgatgtat 3611850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8104516 - 8104460
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||| ||| | ||||||||  |||||||| ||||||||||||    
T  8104516 tccgttttaaaatataagtaaaaataactttttaggttcatttatttaatgatgtat 8104460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 9203521 - 9203465
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||| |||||||||   |||||| ||||||||||||||    
T  9203521 tccgtttttaaatataagcaaaactgacttttttggttcattcaattaatgatgtat 9203465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 11302072 - 11302012
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||  ||||| ||||||||  |||||||||||||| |||||| ||||| |||||    
T  11302072 taaatataagcaaaattaactttttaggttcatttaattaataatgtatgtgattcatatt 11302012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 11303019 - 11302959
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||  ||||| ||||||||  |||||||||||||| |||||| ||||| |||||    
T  11303019 taaatataagcaaaattaactttttaggttcatttaattaataatgtatgtgattcatatt 11302959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 13832145 - 13832093
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||||||||| | || ||||||| |||| |||||| ||||||||||    
T  13832145 tccgtttttaaatataaataaatttgacttcttaaattcattcaattaatgat 13832093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 26492446 - 26492390
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||||   ||||| ||||||||  |||||| ||||||||||||||    
T  26492446 tccgtttttaaatataaacaaaatttactttttaggttcattgaattaatgatgtat 26492390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 32016786 - 32016838
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    |||||||| | ||||| ||||||||  |||||||| |||||||||||||||||    
T  32016786 aaatataaataaaattcactttttaggttcatttatttaatgatgtatatgat 32016838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 34188321 - 34188377
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||| | || |||||||||||  |||||| ||||||||||||||    
T  34188321 tccgttttaaaatataaataaatttgactttttaggttcattcaattaatgatgtat 34188377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 35063464 - 35063519
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  |||||||||||||   |||||| ||||||||||||||    
T  35063464 tccgtttttaaatataagcaaaattgacttttt-ggttcattcaattaatgatgtat 35063519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 38432778 - 38432854
Alignment:
Q  85 taatttagaaattataattatattttttataactttaaaagaaataaatgacacaaactaattttgttaaagggtgt 161  Q
    |||||||||||||| |||| |||| ||||||||||| |  ||||||||||| |  |  ||||||| |||||||||||    
T  38432778 taatttagaaattacaattgtattctttataactttgagggaaataaatgagatcacttaattttcttaaagggtgt 38432854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 40802206 - 40802262
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  || || ||||||||| |||||| ||||||||||||||    
T  40802206 tccgtttctaaatataagcaaattttactttttaagttcattcaattaatgatgtat 40802262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 43484069 - 43484013
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  || || ||||||||  |||||| ||||||||||||||    
T  43484069 tccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtat 43484013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 24529710 - 24529654
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||||||||| | |||||| ||||||||||||||    
T  24529710 tccgtttttaaatataagtaaaattgacttttttagttcattcaattaatgatgtat 24529654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 44551335 - 44551267
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||| ||| ||||||  ||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  44551335 tccgtttctaattataagcaaaattgactttttaagtttattcaattaatgatgtatatgatttatatt 44551267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 48472757 - 48472813
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||||||||||| |||||| | ||||||||||||    
T  48472757 tccgtttttaaatataagtaaaattgactttttaagttcattcatttaatgatgtat 48472813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 53402995 - 53403062
Alignment:
Q  176 ccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||||||||||||  ||||||||||||||  |||||| |||||||||||||| || ||||||||    
T  53402995 ccgtttttaaatataagcaaaattgactttttatgttcattcaattaatgatgtatgtggtttatatt 53403062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 49806357 - 49806419
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatat 233  Q
    ||||| ||||| ||||||||||| |||| |||||||||  |||||||||||||||||||||||    
T  49806357 tccattcgtttctaaatataagtaaaatcgactttttagattcatttaattaatgatgtatat 49806419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 31914465 - 31914409
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  31914465 tccgtttctaaatataagtaaaattgactttttagattcatttatttaatgatgtat 31914409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 40545299 - 40545355
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||| ||||||||||||||| |||||| | ||||||||||||    
T  40545299 tccgtctttaaatataagtaaaattgactttttaaattcattcatttaatgatgtat 40545355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 42013149 - 42013205
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| || || ||||||||| |||||| ||||||||||||||    
T  42013149 tccgtttttaaatataagtaaattttactttttaaattcattcaattaatgatgtat 42013205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 48088013 - 48088069
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||| ||||||||||||||    
T  48088013 tccgtttttaaatataagcaaaattgactttttatgttcattcaattaatgatgtat 48088069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 52164700 - 52164640
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||||||  ||||| | |||||||||||||| | ||||||||||||    
T  52164700 tccatccgtttttaaatataaggaaaattaaatttttaatttcattcatttaatgatgtat 52164640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 34595819 - 34595760
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||||||||||||   ||||||||||||||  |||||| |||||||||||||||||    
T  34595819 tccgtttttaaatataaacaaaattgactttttaggttcattcaattaatgatgtatatg 34595760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 37306986 - 37306931
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatat 233  Q
    |||||||||||||||| || || ||||||||| |||||| ||||||||||||||||    
T  37306986 gtttttaaatataagtaaattttactttttaaattcattcaattaatgatgtatat 37306931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 49632316 - 49632379
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||| ||||||||||||  ||||||||||||||  |||||| | |||||||||||||||    
T  49632316 tccatccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatatg 49632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 51394236 - 51394173
Alignment:
Q  174 atccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    |||||||| ||||||||||| ||||||||||||||  |||||| | |||||||||||| |||||    
T  51394236 atccgtttctaaatataagtaaaattgactttttagattcattcatttaatgatgtatgtgatt 51394173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 34595702 - 34595752
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    |||||||||| ||||||||||||||  |||||| |||||||||||||||||    
T  34595702 aaatataagtaaaattgactttttaggttcattcaattaatgatgtatatg 34595752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 35003113 - 35003179
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||| ||||||||| | ||||||||||||||  |||||| | |||||||||||| |||||||||    
T  35003113 tccgtttctaaatataaataaaattgactttttaggttcattcatttaatgatgtatgtgatttata 35003179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 54675275 - 54675341
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||| ||||||| ||||||  |||||| ||||||| |||||| || ||||||||    
T  54675275 cgtttttaaatataagtaaaattgattttttatcttcattcaattaataatgtatgtggtttatatt 54675341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 18592348 - 18592409
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | |||||||||||| ||||    
T  18592348 tccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtgat 18592409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 23795716 - 23795647
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaa-tttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||||||  |||||| |||||||  ||||||| | |||||||||||| |||||||||||    
T  23795716 tccgtttttaaatataagcaaaattggctttttaggtttcattcatttaatgatgtatgtgatttatatt 23795647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 25250905 - 25250844
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||||||| ||||||| ||||||| ||||||  || ||| |||||||||||||||||||    
T  25250905 tccgtttttaattataagtaaaattgattttttagattaattcaattaatgatgtatatgat 25250844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 38616544 - 38616491
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||| ||||||||||||| | |||||| | ||||||||||||    
T  38616544 gtttttaaatataagtaaaattgacttttttagttcattcatttaatgatgtat 38616491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8560567 - 8560511
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||| | ||||||||||||||| |||||| | ||||||||||||    
T  8560567 tccgttttttaatataactaaaattgactttttaagttcattcatttaatgatgtat 8560511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 9968304 - 9968360
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| || || ||||||||  |||||| ||||||||||||||    
T  9968304 tccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtat 9968360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 24156142 - 24156198
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  24156142 tccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 24156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 33084857 - 33084802
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||| ||||||||||| ||||||| ||||||| |||||| ||||||||||    
T  33084857 tccatccgtttctaaatataagtaaaattga-tttttaaattcattcaattaatgat 33084802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 34166115 - 34166171
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||||||||||||||  |||||| ||||||||||||||    
T  34166115 tccgtttctaaatataagcaaaattgactttttaggttcattcaattaatgatgtat 34166171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 37306830 - 37306890
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||  || || ||||||||  |||||||||||||||||||||    
T  37306830 tccatccgtttctaaatataagcaaattttactttttaggttcatttaattaatgatgtat 37306890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 50038587 - 50038531
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| || || ||||||||  |||||| ||||||||||||||    
T  50038587 tccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtat 50038531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 50045809 - 50045753
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| || || ||||||||  |||||| ||||||||||||||    
T  50045809 tccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtat 50045753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 51394101 - 51394153
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||||||||||| ||||||||||||||  |||||| | ||||||||    
T  51394101 tccgtttttaaatataagtaaaattgactttttatattcattcatttaatgat 51394153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 9803047 - 9802996
Alignment:
Q  180 ttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||| | ||||||| ||||||| || ||||||||||||||||||    
T  9803047 ttttaaatataaataaaattgattttttaagtttatttaattaatgatgtat 9802996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 18327937 - 18327996
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||| ||||||| | ||||||||||||||  |||||| | |||||||||||||||    
T  18327937 tccgttttttaatataaataaaattgactttttaggttcattcatttaatgatgtatatg 18327996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 18437462 - 18437403
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||| ||||||| | ||||||||||||||  |||||| | |||||||||||||||    
T  18437462 tccgttttttaatataaataaaattgactttttaggttcattcatttaatgatgtatatg 18437403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 24529585 - 24529632
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||| ||||||||||||||  |||||| ||||||||||||||    
T  24529585 aaatataagtaaaattgactttttaggttcattcaattaatgatgtat 24529632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 20787693 - 20787627
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||| ||| ||||||||| ||||||||||||||  |||||| | |||||||||||| || ||||||    
T  20787693 tccgtattttaatataagtaaaattgactttttagattcattcatttaatgatgtatgtggtttata 20787627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 23329369 - 23329439
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||||  |||||||||| || || ||||||||  |||||| |||||||||||||| || ||||||    
T  23329369 tccatccgtttcaaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtggtttata 23329439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 19878403 - 19878362
Alignment:
Q  195 aaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||| || |||||| ||||||||||||||||||||||||||    
T  19878403 aaatttacattttaaattcatttaattaatgatgtatatgat 19878362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 48088132 - 48088083
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaat 224  Q
    ||||||||||||||||||  ||||||||||||||  |||||| |||||||    
T  48088132 tccgtttttaaatataagcaaaattgactttttatgttcattcaattaat 48088083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 4711543 - 4711487
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||| ||||||| ||| ||| ||||||| |||||||||||||||| ||||    
T  4711543 tccgtttctaattataagtaaaaatgattttttaagttcatttaattaatgaagtat 4711487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 5051867 - 5051803
Alignment:
Q  85 taatttagaaattataattatattttttataactttaaaagaaataaatgacacaaactaatttt 149  Q
    |||||||||||||| | || |||| ||||||||||| | | ||||||||||||| ||||| ||||    
T  5051867 taatttagaaattacagttgtattctttataactttgagaaaaataaatgacaccaactagtttt 5051803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 5816571 - 5816603
Alignment:
Q  204 ttttaatttcatttaattaatgatgtatatgat 236  Q
    |||||| ||||||||||||||||||||||||||    
T  5816571 ttttaaattcatttaattaatgatgtatatgat 5816603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 8014186 - 8014242
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  8014186 tccgtatttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 8014242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 15133971 - 15133915
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||  || || ||||||||| |||||| ||||||||||||||    
T  15133971 tccgttttaaaatataagcaaattttactttttaaattcattcaattaatgatgtat 15133915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 19911306 - 19911242
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||||||||||||| ||||| | ||||||| || ||||| |||||||| ||| |||| ||||||    
T  19911306 tttttaaatataagtaaaattaattttttaaatttatttatttaatgatatatgtgatctatatt 19911242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 26206727 - 26206675
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||  || || ||||||||  |||||||||||||||||||||    
T  26206727 tttttaaatataagcaaattttactttttaggttcatttaattaatgatgtat 26206675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 31808321 - 31808381
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||| |||||||||  ||||| ||||||||  |||||| | ||||||||||||    
T  31808321 tccatccgttttaaaatataagcaaaattcactttttaggttcattcatttaatgatgtat 31808381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 34709712 - 34709656
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  34709712 tccgttttttaatataagcaaaattgactttttaggttcattcatttaatgatgtat 34709656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 35967518 - 35967462
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||||||||||||||| |||||| | | ||||||||||    
T  35967518 tccgtttctaaatataagcaaaattgactttttaagttcattcattaaatgatgtat 35967462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 36712192 - 36712132
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||| || || ||||||||| |||||  || |||||||||||    
T  36712192 tccatccgtttctaaatataagtaaattttactttttaaattcatccaaataatgatgtat 36712132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 37252157 - 37252109
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| | ||||||||||||||| |||||| | ||||||||||||    
T  37252157 taaatataaataaaattgactttttaagttcattcatttaatgatgtat 37252109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 38224074 - 38224018
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | ||||| ||||||    
T  38224074 tccgtttttaaatataagcaaaattgactttttagattcattcatttaataatgtat 38224018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 46779431 - 46779375
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  || || | ||||||  |||||||||||||||||||||    
T  46779431 tccgtttttaaatataagcaaattttattttttagattcatttaattaatgatgtat 46779375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 51975261 - 51975205
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||  || || ||||||||| |||||| ||||||||||||||    
T  51975261 tccgttttaaaatataagcaaattttactttttaagttcattcaattaatgatgtat 51975205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 45524 - 45583
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||| ||||||||||| || || ||||||||| ||||||||||||||||||||||||    
T  45524 tccgtttctaaatataagtaaattttactttttaagttcatttaattaatgatgtatatg 45583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 38245719 - 38245660
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  38245719 tccgtctttaaatataagtaaaatttactttttaagttcatttatttaatgatgtatatg 38245660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 29676210 - 29676275
Alignment:
Q  176 ccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||| ||||||||||| ||||||||||||||| |||||||| |||||||| ||| | |||||||    
T  29676210 ccgtttctaaatataagtaaaattgactttttaaattcatttatttaatgatctatgttatttata 29676275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 14626765 - 14626709
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  14626765 tccgtctttaaatataagcaaaattgactttttaaattcattcaattaatgatgtat 14626709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 26043391 - 26043331
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||  ||||| ||||||||| |||||| ||||||||||||||    
T  26043391 tccatccgtttctaaatataagcaaaatttactttttaagttcattcaattaatgatgtat 26043331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 32956421 - 32956477
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||||| ||||||||||||    
T  32956421 tccgtttttaaatataagcaaaattgactttttaggttcatttatttaatgatgtat 32956477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 44414108 - 44414040
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatttt 245  Q
    ||||||||| ||||||| ||||||  ||||||  |||||| |||||||||||||| |||||||||||||    
T  44414108 cgtttttaattataagtaaaattggttttttaggttcattaaattaatgatgtatgtgatttatatttt 44414040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 55198613 - 55198669
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  55198613 tccgtttttaaatataagtaaaattgactttttagattcattcatttaatgatgtat 55198669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 29076528 - 29076595
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatat 242  Q
    ||||||||||||||||||| |||||||  |||||  |||||| |||||||||| ||| ||||||||||    
T  29076528 tccgtttttaaatataagtaaaattgatcttttaggttcattcaattaatgatatatgtgatttatat 29076595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 32146467 - 32146530
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgattt 238  Q
    ||||||||||||||||||| || || ||||||||| || ||| |||||||||||||| ||||||    
T  32146467 tccgtttttaaatataagtaaattttactttttaaatttattcaattaatgatgtatgtgattt 32146530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 43898092 - 43898155
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||||||||||||||||  || || ||||||||  |||||| |||||||||||||||||    
T  43898092 tccatccgtttttaaatataagcaaattttactttttagattcattcaattaatgatgtatatg 43898155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 54008344 - 54008285
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | |||||||||||||||    
T  54008344 tccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatatg 54008285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 14417862 - 14417788
Alignment:
Q  75 ccataaatgataatttagaaattataattatattttttataactttaaaagaaataaatgacacaaactaatttt 149  Q
    ||||||| | ||||||| || ||| |||| |||||||||||||||| ||| ||||||| ||||| ||||||||||    
T  14417862 ccataaaaggtaatttaaaagttacaattgtattttttataactttgaaaaaaataaacgacaccaactaatttt 14417788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 22995699 - 22995765
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||| ||||||||||| || || ||||||||  ||||||||||||||||||||| || ||||||    
T  22995699 tccgtttctaaatataagtaaattttactttttaggttcatttaattaatgatgtatgtggtttata 22995765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 39289702 - 39289632
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||||  |||||||| | || || |||||||| ||||||||||||||||||||| ||| ||||||    
T  39289702 tccatccgtttcaaaatataattaaattttactttttagtttcatttaattaatgatgtaaatggtttata 39289632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 51486427 - 51486481
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||||||||||||  ||||||||||||||  |||||| ||||||||||    
T  51486427 catccgtttttaaatataagcaaaattgactttttaggttcattcaattaatgat 51486481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 25245289 - 25245232
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatg 228  Q
    ||||||||||| ||||||||||| ||||||||||||||  |||||| | |||||||||    
T  25245289 tccatccgtttctaaatataagtaaaattgactttttagattcattcatttaatgatg 25245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 38446880 - 38446820
Alignment:
Q  170 gtccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||| ||||||||||||||||||| ||||||||||||||  |||| || |||||||||||||    
T  38446880 gtccctccgtttttaaatataagtaaaattgactttttaggttca-ttcattaatgatgtat 38446820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 51204486 - 51204547
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    |||||||| |||||||||| || || |||| |||| ||||||||||||||||||||| ||||    
T  51204486 tccgttttaaaatataagtaaattttacttcttaaattcatttaattaatgatgtatgtgat 51204547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14418100 - 14418052
Alignment:
Q  1 ctatcatatttaaagttataattcataaattacccttcaattaatgtga 49  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| |||||    
T  14418100 ctatcatatttaatgttattattcctaaattacccttcaattactgtga 14418052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 17004961 - 17005017
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||| ||||||  |||||| ||||||||||||||    
T  17004961 tccgtttttaaatataagcaaaattgattttttaggttcattcaattaatgatgtat 17005017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 24350931 - 24350875
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||| |||||| | ||||||| ||||    
T  24350931 tccgtttttaaatataaggaaaattgactttttaagttcattcatttaatgaagtat 24350875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 25823737 - 25823681
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||| |||||| | ||||| ||||||    
T  25823737 tccgtttttaaatataagcaaaattgactttttaagttcattcatttaataatgtat 25823681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 37331730 - 37331670
Alignment:
Q  181 tttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||  ||||||||||||||  |||||||| |||||||||||| || ||||||    
T  37331730 tttaaatataagcaaaattgactttttaggttcatttatttaatgatgtatgtggtttata 37331670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 44544294 - 44544234
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||| |||||||||||||||  |||||||||||||   |||||| ||||||||||||||    
T  44544294 tccatctgtttttaaatataagcaaaattgacttttttggttcattcaattaatgatgtat 44544234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 46739444 - 46739376
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    ||||| |||||||||||| ||| || ||||||||| |||||| ||||||| |||||| |||| ||||||    
T  46739444 tccgtatttaaatataagctaattttactttttaagttcattcaattaataatgtatgtgatctatatt 46739376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 47143296 - 47143348
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgta 230  Q
    |||| ||||||||||  ||||||| ||||||| ||||||||||||||||||||    
T  47143296 gtttctaaatataagcaaaattgattttttaagttcatttaattaatgatgta 47143348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 54985522 - 54985582
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||||||||   ||||||||| ||||  |||||| ||||||||||||||    
T  54985522 tccatccgtttttaaatataaacaaaattgactctttaggttcattcaattaatgatgtat 54985582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 21659144 - 21659203
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatt 237  Q
    ||||| |||||||||| || || ||||||||| |||||| |||||||||||||| |||||    
T  21659144 gttttaaaatataagtaaattttactttttaagttcattcaattaatgatgtatgtgatt 21659203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 26043253 - 26043308
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgta 230  Q
    ||||||||||||||||||| || || ||||||||  |||||| |||||||||||||    
T  26043253 tccgtttttaaatataagtaaattttactttttagattcattgaattaatgatgta 26043308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 31180723 - 31180786
Alignment:
Q  93 aaattataattatattttt-tataactttaaaagaaataaatgacacaaactaattttgttaaa 155  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||| || ||||||| |||||    
T  31180723 aaattataattgtatttttatataactttgagagaaataaatgacaccaattaattttcttaaa 31180786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 38446742 - 38446801
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||| ||||||||||||  |||||||| |||||| |||||| | |||||||||||||||    
T  38446742 tccgtctttaaatataagcaaaattgaccttttaagttcattcatttaatgatgtatatg 38446801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 17501540 - 17501486
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||  |||||||||||||   |||||| ||||||||||||||    
T  17501540 cgtttttaaatataagcaaaattgacttttttgattcattcaattaatgatgtat 17501486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 24350811 - 24350865
Alignment:
Q  177 cgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||| ||||||| ||||||  |||||| | ||||||||||||    
T  24350811 cgtttttaaatataagtaaaattgattttttagattcattcatttaatgatgtat 24350865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 29676345 - 29676287
Alignment:
Q  173 catccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| | ||||||||  ||||||| ||||||| |||||||| ||||||||||||    
T  29676345 catccgtttcttaatataagcaaaattgattttttaagttcatttatttaatgatgtat 29676287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 32956555 - 32956497
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatat 233  Q
    ||||||| ||||||||||| ||||||||||||||  |||||| | |||||||| |||||    
T  32956555 tccgtttctaaatataagtaaaattgactttttagattcattcatttaatgatatatat 32956497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 16894307 - 16894246
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    |||||||||||||||||   ||||||||||||||  || ||| |||||||||||||| ||||    
T  16894307 tccgtttttaaatataaacaaaattgactttttagatttattcaattaatgatgtatgtgat 16894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 40326566 - 40326509
Alignment:
Q  184 aaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    |||||||||  ||||||||||||||  |||||| |||||||||||||| || ||||||    
T  40326566 aaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtggtttata 40326509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 44544157 - 44544226
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttat 240  Q
    ||||||||| |  |||||||||  ||||||||||||||  |||||| |||||||||||||| || |||||    
T  44544157 tccatccgtatcaaaatataagcaaaattgactttttaggttcattcaattaatgatgtatgtggtttat 44544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 1927504 - 1927560
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||| ||||| | ||||||| |||||| | ||||||||||||    
T  1927504 tccgtttctaaatataagtaaaatttattttttaagttcattcatttaatgatgtat 1927560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 17005097 - 17005041
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| | ||||||||  ||||||||||||||  |||||| ||||||||||||||    
T  17005097 tccgtttctgaatataagcaaaattgactttttaggttcattcaattaatgatgtat 17005041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 17501408 - 17501464
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| || |||||||||| ||||||| ||||||  |||||||||||||||| ||||    
T  17501408 tccgtattaaaatataagtaaaattgattttttagcttcatttaattaatgaagtat 17501464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 17940191 - 17940247
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| ||||||||  |||||| | ||||||||||||    
T  17940191 tccgtttttaaatataagcaaaatttactttttaggttcattcatttaatgatgtat 17940247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 19679099 - 19679043
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  || || ||||||||| |||||| ||||||||||||||    
T  19679099 tccgtttctaaatataagcaaattttactttttaagttcattcaattaatgatgtat 19679043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 20821440 - 20821500
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||||||||||  |||||  || |||||||||||  |||||| ||||||||||||||    
T  20821440 tccatccgtttttaatcataagcaaatttgactttttaggttcattcaattaatgatgtat 20821500  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 23317015 - 23317075
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||||||||||  || |||||||||||   ||||| ||||||||||||||    
T  23317015 tccatccgtttctaaatataagcaaatttgactttttatagtcattcaattaatgatgtat 23317075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 25995679 - 25995623
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  || |||||||||||  |||||| | ||||||||||||    
T  25995679 tccgtttttaaatataagcaaatttgactttttaggttcattcatttaatgatgtat 25995623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 28811651 - 28811595
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||| ||||||| ||||||  |||||| | ||||||||||||    
T  28811651 tccgtctttaaatataagtaaaattgattttttaggttcattcatttaatgatgtat 28811595  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 29076654 - 29076606
Alignment:
Q  183 taaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||  ||||||||||||||  |||||| ||||||||||||||    
T  29076654 taaatataagcaaaattgactttttagattcattcaattaatgatgtat 29076606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 29352736 - 29352792
Alignment:
Q  180 ttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    |||||||||||||  ||||||||||||||  |||||||| ||||| |||||| ||||    
T  29352736 ttttaaatataagcaaaattgactttttaggttcatttatttaataatgtatgtgat 29352792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 29352865 - 29352809
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| ||||| | ||||||  |||||| | ||||||||||||    
T  29352865 tccgtttttaaatataagtaaaatttattttttaggttcattcatttaatgatgtat 29352809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 29726411 - 29726355
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  29726411 tccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 29726355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 29726503 - 29726447
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  29726503 tccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 29726447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 29726595 - 29726539
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||| ||||||||||||  ||||||||||||||  |||||| | ||||||||||||    
T  29726595 tccgtctttaaatataagcaaaattgactttttaggttcattcatttaatgatgtat 29726539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 33639051 - 33638995
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||| ||||||||  |||||| | ||||||||||||    
T  33639051 tccgtttttaaatataagcaaaattcactttttaggttcattcatttaatgatgtat 33638995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 34935541 - 34935597
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  || || ||||||||  |||||| ||||||||||||||    
T  34935541 tccgtttttaaatataagcaaattttactttttaggttcattcaattaatgatgtat 34935597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 36571488 - 36571444
Alignment:
Q  198 ttgactttttaatttcatttaattaatgatgtatatgatttatat 242  Q
    |||||||||||| |||||| | | |||||||||||||||||||||    
T  36571488 ttgactttttaagttcattcattaaatgatgtatatgatttatat 36571444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 37740082 - 37740030
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgat 227  Q
    ||||||||||||||||||| ||||||| ||||||  || ||||| ||||||||    
T  37740082 tccgtttttaaatataagtaaaattgattttttaggttgatttatttaatgat 37740030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 39530528 - 39530476
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||  |||||||||||||   |||||| ||||||||||||||    
T  39530528 tttttaaatataagcaaaattgactttttttgttcattcaattaatgatgtat 39530476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 40326445 - 40326497
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||| | |||||||||||||   |||||| ||||||||||||||    
T  40326445 tttttaaatataaataaaattgacttttttgattcattcaattaatgatgtat 40326497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 40760774 - 40760830
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||| ||||||| ||||||  |||||| ||||||| ||||||    
T  40760774 tccgtttctaaatataagtaaaattgattttttaggttcattcaattaataatgtat 40760830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 43333922 - 43333978
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||| || || || |||||  |||||| ||||||||||||||    
T  43333922 tccgtttttaaatataagtaaattttacgttttaggttcattcaattaatgatgtat 43333978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 43557001 - 43556941
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| |||| |||||||||| ||||| ||||||||  |||||| | ||||||||||||    
T  43557001 tccatccattttaaaatataagtaaaatttactttttaggttcattcatttaatgatgtat 43556941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 47342719 - 47342663
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||||| |||||||||  ||||| ||||||||  |||||||| ||||||||||||    
T  47342719 tccgttttaaaatataagcaaaatttactttttaggttcatttatttaatgatgtat 47342663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 54690441 - 54690497
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    |||||| |||||||||||  || |||||||||||  |||||| ||||||||||||||    
T  54690441 tccgttcttaaatataagcaaatttgactttttatgttcattcaattaatgatgtat 54690497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 17571 - 17505
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttata 241  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | |||||||||||| || ||||||    
T  17571 tccgtttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatgtggtttata 17505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 13695 - 13754
Alignment:
Q  171 tccatccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||| ||| ||||||| ||||||||||||||  |||||| ||||||||||||||    
T  13695 tccatccgtttctaa-tataagtaaaattgactttttagattcattcaattaatgatgtat 13754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 491987 - 491919
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatgatttatatt 243  Q
    |||||||| ||| |||||  ||||| | ||||||| |||||||| ||||||||||||||||| ||||||    
T  491987 tccgttttaaaacataagcaaaattcattttttaagttcatttatttaatgatgtatatgatctatatt 491919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 22577 - 22522
Alignment:
Q  179 tttttaaatataagttaaattgactttttaatttcatttaattaatgatgtatatg 234  Q
    ||||||||||||||  ||||||||||||||  |||||| | |||||||||||||||    
T  22577 tttttaaatataagcaaaattgactttttaggttcattcatttaatgatgtatatg 22522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 22447 - 22503
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||| ||  |||||| | ||||||||||||    
T  22447 tccgtttttaaatataagcaaaattgactttgtaggttcattcacttaatgatgtat 22503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 63453 - 63502
Alignment:
Q  187 tataagttaaattgactttttaatttcatttaattaatgatgtatatgat 236  Q
    ||||||| || |||||||||||  |||||| |||||||||||||||||||    
T  63453 tataagtaaatttgactttttacgttcattcaattaatgatgtatatgat 63502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 11721 - 11665
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||| ||||||||||  ||||| ||||||||  |||||| ||||||||||||||    
T  11721 tccgtttctaaatataagccaaatttactttttaggttcattcaattaatgatgtat 11665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 8282 - 8338
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||||||||||||  ||||||||||||||  |||||| | ||||| ||||||    
T  8282 tccgtttttaaatataagcaaaattgactttttagattcattcatttaattatgtat 8338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 49669 - 49721
Alignment:
Q  178 gtttttaaatataagttaaattgactttttaatttcatttaattaatgatgta 230  Q
    |||| ||||||||||  ||||||||||||||  |||||||| |||||||||||    
T  49669 gtttctaaatataagcaaaattgactttttagattcatttatttaatgatgta 49721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 49800 - 49744
Alignment:
Q  175 tccgtttttaaatataagttaaattgactttttaatttcatttaattaatgatgtat 231  Q
    ||||||||| ||||||||| |||||||||||||   |||||| | ||||||||||||    
T  49800 tccgttttttaatataagtaaaattgacttttttggttcattcatttaatgatgtat 49744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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