View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16367_low_8 (Length: 238)
Name: NF16367_low_8
Description: NF16367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16367_low_8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 37290881 - 37290660
Alignment:
| Q |
17 |
atatttcctgtgtgcttcatgtttgagcttaaccttcctacaacatattgattatatcaagtgaaagtcgtttatttatatagctagacacatcatttac |
116 |
Q |
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| T |
37290881 |
atatttcctgtgtgcttcatgtttgagcttaaccttcctacaacatattgattatatcaagtgaaagtcgtttatttatatagctagacacatcatttac |
37290782 |
T |
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| Q |
117 |
atattnnnnnnnngaattttacctctccaatgtgcaaagtttaatttcatatgatcatagatatgagattactttcttaacaagtaattcccaaaaagga |
216 |
Q |
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| T |
37290781 |
atattaaaaaaaagaattttacctctccaatgtgcaaagtttaatttcatatgatcatagatatgagattactttcttaacaagtaattcccaaaaagga |
37290682 |
T |
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| Q |
217 |
atttataaaggtatcgaaaact |
238 |
Q |
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| T |
37290681 |
atttataaaggtatcgaaaact |
37290660 |
T |
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