View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16367_low_9 (Length: 238)

Name: NF16367_low_9
Description: NF16367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16367_low_9
NF16367_low_9
[»] chr5 (16 HSPs)
chr5 (10-231)||(4478426-4478647)
chr5 (97-186)||(27378771-27378869)
chr5 (94-179)||(23204195-23204280)
chr5 (46-92)||(43564673-43564719)
chr5 (46-92)||(36662392-36662438)
chr5 (46-92)||(36667233-36667279)
chr5 (46-92)||(36674496-36674542)
chr5 (46-92)||(36679340-36679386)
chr5 (46-92)||(43560041-43560087)
chr5 (94-182)||(36674560-36674657)
chr5 (94-182)||(36679404-36679501)
chr5 (94-142)||(36662326-36662374)
chr5 (94-142)||(36667167-36667215)
chr5 (46-92)||(23204131-23204177)
chr5 (126-182)||(43559925-43559982)
chr5 (94-142)||(43559975-43560023)
[»] chr1 (21 HSPs)
chr1 (40-186)||(19807237-19807399)
chr1 (94-185)||(14635109-14635200)
chr1 (46-182)||(52890686-52890822)
chr1 (94-182)||(29891433-29891521)
chr1 (123-186)||(19932636-19932699)
chr1 (94-182)||(52887473-52887561)
chr1 (123-186)||(8900726-8900789)
chr1 (42-87)||(19932933-19932978)
chr1 (94-182)||(20203508-20203605)
chr1 (126-177)||(1696316-1696367)
chr1 (46-92)||(20154423-20154469)
chr1 (46-92)||(29886808-29886854)
chr1 (46-92)||(52604576-52604622)
chr1 (46-92)||(52609387-52609433)
chr1 (94-182)||(20154487-20154584)
chr1 (94-182)||(52604640-52604737)
chr1 (94-182)||(52609451-52609548)
chr1 (126-182)||(29886693-29886749)
chr1 (46-89)||(20203626-20203669)
chr1 (46-92)||(29891539-29891585)
chr1 (46-92)||(52887578-52887624)
[»] chr7 (30 HSPs)
chr7 (94-186)||(40124206-40124297)
chr7 (94-186)||(42356991-42357083)
chr7 (94-186)||(42360603-42360695)
chr7 (37-186)||(993389-993563)
chr7 (94-182)||(3713957-3714045)
chr7 (39-186)||(37981058-37981230)
chr7 (94-186)||(45182141-45182242)
chr7 (94-182)||(48723464-48723552)
chr7 (94-186)||(45187699-45187800)
chr7 (94-182)||(42104779-42104876)
chr7 (94-182)||(42109769-42109866)
chr7 (39-92)||(42360532-42360585)
chr7 (126-182)||(48728368-48728424)
chr7 (46-92)||(3713893-3713939)
chr7 (46-92)||(3718614-3718660)
chr7 (46-92)||(42104894-42104940)
chr7 (46-92)||(42109884-42109930)
chr7 (39-92)||(45187627-45187681)
chr7 (46-92)||(48508965-48509011)
chr7 (46-92)||(48513809-48513855)
chr7 (46-92)||(48728263-48728309)
chr7 (94-182)||(48509029-48509126)
chr7 (94-182)||(48513873-48513970)
chr7 (126-178)||(3718719-3718771)
chr7 (46-89)||(42356927-42356970)
chr7 (39-85)||(40124134-40124180)
chr7 (39-92)||(45182069-45182123)
chr7 (46-92)||(48723400-48723446)
chr7 (141-182)||(48728482-48728523)
chr7 (141-182)||(48728581-48728622)
[»] chr3 (19 HSPs)
chr3 (94-187)||(11901810-11901903)
chr3 (94-182)||(55493206-55493294)
chr3 (126-186)||(36497434-36497494)
chr3 (126-186)||(36501053-36501113)
chr3 (126-182)||(33823061-33823117)
chr3 (126-182)||(46073091-46073147)
chr3 (126-182)||(55488383-55488439)
chr3 (127-182)||(46077680-46077735)
chr3 (38-92)||(36501172-36501226)
chr3 (46-92)||(38323224-38323270)
chr3 (46-92)||(38328120-38328166)
chr3 (46-92)||(46073206-46073252)
chr3 (46-92)||(46077795-46077841)
chr3 (46-92)||(55488498-55488544)
chr3 (46-92)||(55493311-55493357)
chr3 (39-92)||(36497553-36497606)
chr3 (94-182)||(38323288-38323385)
chr3 (126-182)||(44742770-44742826)
chr3 (96-137)||(33823022-33823063)
[»] chr4 (12 HSPs)
chr4 (94-186)||(37077253-37077345)
chr4 (94-186)||(26549345-26549437)
chr4 (94-186)||(37073685-37073786)
chr4 (127-187)||(28830398-28830458)
chr4 (114-186)||(46240601-46240673)
chr4 (46-92)||(56135113-56135159)
chr4 (39-88)||(26549459-26549508)
chr4 (39-92)||(37073804-37073857)
chr4 (39-92)||(37077363-37077416)
chr4 (39-92)||(28830518-28830566)
chr4 (41-92)||(46240545-46240596)
chr4 (126-182)||(56135218-56135275)
[»] chr2 (18 HSPs)
chr2 (94-186)||(4132430-4132522)
chr2 (39-186)||(26775545-26775708)
chr2 (136-186)||(32663051-32663101)
chr2 (40-92)||(4132359-4132412)
chr2 (46-92)||(12509430-12509476)
chr2 (46-92)||(14676450-14676496)
chr2 (46-92)||(14681294-14681340)
chr2 (46-92)||(35753490-35753536)
chr2 (94-182)||(12504471-12504568)
chr2 (94-182)||(12509315-12509412)
chr2 (129-182)||(39587396-39587449)
chr2 (94-182)||(39591755-39591852)
chr2 (94-142)||(14676514-14676562)
chr2 (94-142)||(14681358-14681406)
chr2 (94-142)||(35753424-35753472)
chr2 (46-92)||(12504586-12504632)
chr2 (131-186)||(32667663-32667720)
chr2 (40-92)||(32667555-32667608)
[»] chr8 (16 HSPs)
chr8 (97-187)||(27414674-27414764)
chr8 (98-186)||(8475840-8475937)
chr8 (94-187)||(2354901-2355000)
chr8 (126-182)||(18898920-18898976)
chr8 (46-92)||(18898815-18898861)
chr8 (46-92)||(20793316-20793362)
chr8 (46-92)||(44197763-44197809)
chr8 (46-92)||(44202605-44202651)
chr8 (129-182)||(43901125-43901178)
chr8 (94-142)||(1067935-1067983)
chr8 (94-142)||(40444269-40444317)
chr8 (94-142)||(44197697-44197745)
chr8 (94-142)||(44202539-44202587)
chr8 (41-92)||(1067866-1067917)
chr8 (39-92)||(2355018-2355071)
chr8 (96-137)||(18898881-18898922)
[»] scaffold0014 (6 HSPs)
scaffold0014 (94-182)||(163964-164052)
scaffold0014 (46-92)||(173379-173425)
scaffold0014 (94-182)||(143458-143555)
scaffold0014 (94-182)||(173264-173361)
scaffold0014 (46-92)||(143573-143619)
scaffold0014 (46-92)||(164070-164116)
[»] scaffold0167 (3 HSPs)
scaffold0167 (126-182)||(31770-31826)
scaffold0167 (46-92)||(31885-31931)
scaffold0167 (96-137)||(31824-31865)
[»] chr6 (5 HSPs)
chr6 (96-182)||(26846634-26846729)
chr6 (46-92)||(29651641-29651687)
chr6 (46-92)||(29656485-29656531)
chr6 (94-182)||(29651526-29651623)
chr6 (94-182)||(29656370-29656467)
[»] scaffold1270 (1 HSPs)
scaffold1270 (141-182)||(7-48)


Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 10 - 231
Target Start/End: Complemental strand, 4478647 - 4478426
Alignment:
Q  10 aacaaaatcaaatataaattgtatgccactcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacatgtcctagttaatcccca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4478647 aacaaaatcaaatataaattgtatgccactcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacgtgtcctagttaatcccca 4478548  T
Q  110 attaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaacagccacaaaagaaccaaaccatac 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4478547 attaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaacagccacaaaagaaccaaaccatac 4478448  T
Q  210 ctgtgcttctgctatgatgatg 231  Q
    ||||||||||||||||||||||    
T  4478447 ctgtgcttctgctatgatgatg 4478426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 27378869 - 27378771
Alignment:
Q  97 tagttaatccccaattaatagggaagattaatcaatacaat---------aaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||||| || ||||||||||||||||||||||         |||||   |||||||||||||||||||||||||||||||||||||||||    
T  27378869 tagttaatccccaatcaacagggaagattaatcaatacaatcaatataataaatatgaaagataaaactaaacagtcacaacttttcaatatctcaaca 27378771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 23204195 - 23204280
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatat 179  Q
    |||||| ||| ||| |||||||| |||||||||||||||||||| | ||| | || |||||||||| |||||||||||||||||||    
T  23204195 tcctagctaacccctaattaataaggaagattaatcaatacaatgactagcggagttaaaactaaatagtcacaacttttcaatat 23204280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 43564719 - 43564673
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  43564719 actgaaaatatgtttattatatcatattatgtggtgagaatgtacat 43564673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 36662438 - 36662392
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  36662438 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 36662392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 36667279 - 36667233
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  36667279 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 36667233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 36674496 - 36674542
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  36674496 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 36674542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 36679340 - 36679386
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  36679340 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 36679386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 43560087 - 43560041
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  43560087 actgaaaatatgtttattatatcatattatgcggtgagaatgtacat 43560041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 36674560 - 36674657
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  36674560 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 36674657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 36679404 - 36679501
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  36679404 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 36679501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 36662374 - 36662326
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  36662374 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 36662326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 36667215 - 36667167
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  36667215 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 36667167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 23204131 - 23204177
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||||    
T  23204131 actgaaaatatgtttattatattatattatatggtgagaatgtacat 23204177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 43559982 - 43559925
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaa-cttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| |||||||| ||||||||||||||    
T  43559982 aatcaatacaatgactagtggagttaaaactaaatagtcacaatcttttcaatatctc 43559925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 43560023 - 43559975
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||| ||||| ||||    
T  43560023 tcctagttaacccctaattaataaggaagattaatcaacacaatcaata 43559975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 19807399 - 19807237
Alignment:
Q  40 cttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacatgt----------------cctagttaatccccaattaatagggaaga 123  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||| |                |||||||||||| ||||||||||||||||    
T  19807399 cttaagactgaaaatatgtttattatattatattatgtggggagaatgtacatttatataggcaggagcctcctagttaatcctcaattaatagggaaga 19807300  T
Q  124 ttaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  19807299 ttaatcaatacaataaacagggaagataaaactaaacagtcacaacttttcaatatctcaaca 19807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 14635200 - 14635109
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaac 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||    
T  14635200 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaacaaaatagttgcaacttttcaatatctcaac 14635109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 52890822 - 52890686
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacatgtcctagttaatccccaattaatagggaagattaatcaatacaataaatagtg 145  Q
    ||||||||||||||||||| |||||||||||||| |||| |     | |||||||||| ||| |||||||| |||||||||||||||||||| | |||||    
T  52890822 actgaaaatatgtttattatatcatattatgtggtgagagtaggagtctcctagttaacccctaattaataaggaagattaatcaatacaatgactagtg 52890723  T
Q  146 aagataaaactaaacagtcacaacttttcaatatctc 182  Q
     || |||||||||| ||||||||||||||||||||||    
T  52890722 gagttaaaactaaatagtcacaacttttcaatatctc 52890686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 29891521 - 29891433
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  29891521 tcctagttaacccctaattaataaggaagattaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 29891433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 19932699 - 19932636
Alignment:
Q  123 attaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  19932699 attaatcaatacaataaatagtggagataaaactaaacagtcacaacttttcagtatctcaaca 19932636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 52887561 - 52887473
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| | |||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  52887561 tcctagttaacccctaattaataagaaagattaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 52887473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 8900789 - 8900726
Alignment:
Q  123 attaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||||||||||  | || | |||||||| ||||||||||||||||||||||||||    
T  8900789 attaatcaatacaataaataacggagttcaaactaaatagtcacaacttttcaatatctcaaca 8900726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 19932978 - 19932933
Alignment:
Q  42 taagactgaaaatatgtttattacatcatattatgtggggagaatg 87  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  19932978 taagactgaaaatatgtttattatatcttattatgtggggagaatg 19932933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 20203605 - 20203508
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata---------gtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||         ||| || |||||||||| ||||||||||||||||||||||    
T  20203605 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 20203508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 1696367 - 1696316
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaat 177  Q
    |||||| | ||||||||| |||||||||||||| ||||||||||||||||||    
T  1696367 aatcaagataataaatagggaagataaaactaagcagtcacaacttttcaat 1696316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 20154423 - 20154469
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  20154423 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 20154469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 29886854 - 29886808
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  29886854 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 29886808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 52604576 - 52604622
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  52604576 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 52604622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 52609387 - 52609433
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  52609387 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 52609433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 20154487 - 20154584
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  20154487 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 20154584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 52604640 - 52604737
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  52604640 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 52604737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 52609451 - 52609548
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  52609451 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 52609548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 29886749 - 29886693
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| ||||||||||||||| ||||||    
T  29886749 aatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcattatctc 29886693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 20203669 - 20203626
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgta 89  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||    
T  20203669 actgaaaatatgtttattatatcatattatgtggtgagagtgta 20203626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 29891585 - 29891539
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||| |||| |||||||||||||| |||| |||||||    
T  29891585 actgaaaatatgttcattatatcatattatgtggtgagagtgtacat 29891539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 52887624 - 52887578
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||||||||  ||||||||||||| |||| |||||||    
T  52887624 actgaaaatatgtttattatctcatattatgtggtgagagtgtacat 52887578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 40124206 - 40124297
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40124206 tcctatttaatccccaatta-tagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 40124297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 42356991 - 42357083
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  42356991 tcctagttaatccctaattaataaggaagattaatcaatacaataaatagtgaagttaaaactaaatagtcacaacttttcaatatctcaaca 42357083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 42360603 - 42360695
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42360603 tcctagttaatccctaattaataagtaagattaatcaatacaataaatagtgaagttaaaactaaacagtcacaacttttcaatatctcaaca 42360695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 37 - 186
Target Start/End: Complemental strand, 993563 - 993389
Alignment:
Q  37 actcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacatgt----------------cctagttaatccccaattaataggga 120  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |                ||||||||||||||||||||||||||    
T  993563 actcttaagactggaaatatgtttattatgtcatattatgtggggagaatgtacatttatataggcaggagtctcctagttaatccccaattaataggga 993464  T
Q  121 agattaatcaatacaat---------aaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    |||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||    
T  993463 agattaatcaatacaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 3713957 - 3714045
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  3713957 tcctagttaacccctaattaataaggaagattaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 3714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 186
Target Start/End: Original strand, 37981058 - 37981230
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacatgt----------------cctagttaatccccaattaatagggaag 122  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||| |                ||||||||||||| |||||||| |||||    
T  37981058 tcttaagactgaaaatatgtttatcatatcaaattatgtggggagaatgtacatttatatgggtaggagtttcctagttaatccctaattaataaggaag 37981157  T
Q  123 attaatcaat---------acaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||         |||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  37981158 attaatcaatacaaccaatacaataaatagtgaagttaaaactaaatagtcacaacttttcaatatctcaaca 37981230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 45182141 - 45182242
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatc---------aatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaa 184  Q
    |||||||||||||| |||||||| ||||||||||||         ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  45182141 tcctagttaatccctaattaataaggaagattaatcaatacaatcaatacaataaatagtgaagttaaaactaaatagtcacaacttttcaatatctcaa 45182240  T
Q  185 ca 186  Q
    ||    
T  45182241 ca 45182242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 48723464 - 48723552
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| || ||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  48723464 tcctagttaacccctaattaataaggtagattaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 48723552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 45187699 - 45187800
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatc---------aatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaa 184  Q
    |||||||||||||| |||||||| ||||||||||||         ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  45187699 tcctagttaatccctaattaataaggaagattaatcaatacaatcaatacaataaatagtgaagttaaaactaaatagtcacaacttttgaatatctcaa 45187798  T
Q  185 ca 186  Q
    ||    
T  45187799 ca 45187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 42104876 - 42104779
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata---------gtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||         ||| || |||||||||| ||||||||||||||||||||||    
T  42104876 tcctagttaacccctaattaataaggaagattaatcaatacaatcaataaaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 42104779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 42109866 - 42109769
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata---------gtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||         ||| || |||||||||| ||||||||||||||||||||||    
T  42109866 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 42109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 42360532 - 42360585
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||| ||||||||||||| | |||| ||||||||||||||||||||||    
T  42360532 tcttaagactaaaaatatgtttatcatatcaaattatgtggggagaatgtacat 42360585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 48728368 - 48728424
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  48728368 aatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 48728424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 3713893 - 3713939
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  3713893 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 3713939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 3718614 - 3718660
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  3718614 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 3718660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 42104940 - 42104894
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  42104940 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 42104894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 42109930 - 42109884
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  42109930 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 42109884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 45187627 - 45187681
Alignment:
Q  39 tcttaagactgaaaatatgtttatt-acatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||||||||||| || | |||| ||||||||||||||||||||||    
T  45187627 tcttaagactgaaaatatgttttttcatatcaaattatgtggggagaatgtacat 45187681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 48508965 - 48509011
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  48508965 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 48509011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 48513809 - 48513855
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  48513809 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 48513855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 48728263 - 48728309
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||    
T  48728263 actgaaaataagtttattatatcatattatgtggtgagaatgtacat 48728309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 48509029 - 48509126
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  48509029 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 48509126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 48513873 - 48513970
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  48513873 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 48513970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 3718719 - 3718771
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaata 178  Q
    |||||||||||| |  ||||||| |||||||||| ||||||||||||||||||    
T  3718719 aatcaatacaatgaccagtgaagttaaaactaaatagtcacaacttttcaata 3718771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 42356927 - 42356970
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgta 89  Q
    ||||||||||||||||| | |||| |||||||||||||||||||    
T  42356927 actgaaaatatgtttatcatatcaaattatgtggggagaatgta 42356970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 40124134 - 40124180
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaa 85  Q
    ||||||||||||||||||||||||||   ||||||||| ||||||||    
T  40124134 tcttaagactgaaaatatgtttattatcacatattatgaggggagaa 40124180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 45182069 - 45182123
Alignment:
Q  39 tcttaagactgaaaatatgtttatt-acatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||||||||||| || | |||| ||||||| ||||||||||||||    
T  45182069 tcttaagactgaaaatatgttttttcatatcaaattatgtagggagaatgtacat 45182123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 48723400 - 48723446
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||    
T  48723400 actgaaaataagtttattatatcatattatgtggtgagagtgtacat 48723446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 48728482 - 48728523
Alignment:
Q  141 tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    ||||| || |||||||||| ||||||||||||||||||||||    
T  48728482 tagtggagttaaaactaaatagtcacaacttttcaatatctc 48728523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 48728581 - 48728622
Alignment:
Q  141 tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    ||||| || |||||||||| ||||||||||||||||||||||    
T  48728581 tagtggagttaaaactaaatagtcacaacttttcaatatctc 48728622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 11901903 - 11901810
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaacag 187  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  11901903 tcctagttaatccccaatcaatagggaagattaatcaatacaataaataaggaagataaaactaaacagtcacaactattcaatatctcaacag 11901810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 55493294 - 55493206
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  55493294 tcctagttaacccctaattaataaggaagattaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 55493206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 36497494 - 36497434
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||||    
T  36497494 aatcaatacaataaatagtgaagttagaactaaatagtcacaactttccaatatctcaaca 36497434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 36501113 - 36501053
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||| |||||||||||||    
T  36501113 aatcaatacaataaatagtgaagttgaaactaaatagtcacaactttccaatatctcaaca 36501053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 33823061 - 33823117
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  33823061 aatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 33823117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 46073147 - 46073091
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  46073147 aatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 46073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 55488439 - 55488383
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  55488439 aatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 55488383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 46077735 - 46077680
Alignment:
Q  127 atcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    ||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  46077735 atcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 46077680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 36501226 - 36501172
Alignment:
Q  38 ctcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||||||| | | |||| ||||||||||| ||||||||||    
T  36501226 ctcttaagactgaaaatatgtttctcatatcaaattatgtggggtgaatgtacat 36501172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 38323224 - 38323270
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  38323224 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 38323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 38328166 - 38328120
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  38328166 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 38328120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 46073252 - 46073206
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  46073252 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 46073206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 46077841 - 46077795
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  46077841 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 46077795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 55488544 - 55488498
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  55488544 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 55488498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 55493357 - 55493311
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  55493357 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 55493311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 36497606 - 36497553
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||||||||||| | | |||| ||||||||||| ||||||||||    
T  36497606 tcttaagactgaaaatatgtttctcatatcaaattatgtggggtgaatgtacat 36497553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 38323288 - 38323385
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  38323288 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 38323385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 44742770 - 44742826
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| |||||||||||| |||||||||    
T  44742770 aatcaatacaatgactagtggagttaaaactaaatagtcacaactttccaatatctc 44742826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 33823022 - 33823063
Alignment:
Q  96 ctagttaatccccaattaatagggaagattaatcaatacaat 137  Q
    |||||||| ||| |||||||| ||||||||||||||||||||    
T  33823022 ctagttaacccctaattaataaggaagattaatcaatacaat 33823063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 37077345 - 37077253
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  37077345 tcctagttaatccctaattaataaggaagattaatcaatacaataaatagtgaagttaaaactaaatagtcacaacttttcaatatctcaaca 37077253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 26549437 - 26549345
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||||||||| ||||||||    
T  26549437 tcctagttaatccctaattaataaggaagattaatcaatacaataaataatgaagttaaaactaaatagtcataacttttcaatgtctcaaca 26549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 37073786 - 37073685
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaat---------aaatagtgaagataaaactaaacagtcacaacttttcaatatctcaa 184  Q
    |||||||||||||| |||||||| ||||||||||||||||||||         ||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  37073786 tcctagttaatccctaattaataaggaagattaatcaatacaatcaatacaataaatattgaagttaaaactaaatagtcacaacttttcaatatctcaa 37073687  T
Q  185 ca 186  Q
    ||    
T  37073686 ca 37073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 28830458 - 28830398
Alignment:
Q  127 atcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaacag 187  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  28830458 atcaatacaataaatattgaagttaaaactaaatagtcacaacttttcaatatctcaacag 28830398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 46240601 - 46240673
Alignment:
Q  114 atagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||| |||||||||||||| ||||||||||||| || ||||| |||||||||||||||| |||||| |||||    
T  46240601 ataggaaagattaatcaatataataaatagtgaatatgaaacttaacagtcacaacttttaaatatcgcaaca 46240673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 56135113 - 56135159
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  56135113 actgaaaatatgtttattatatcatattatgtggtgagaatgtacat 56135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 26549508 - 26549459
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgt 88  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  26549508 tcttaagactgaaaatatgtttgttatatcatattatatggggagaatgt 26549459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 37073857 - 37073804
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||||||||||||| | |||| |||||||||||| |||||||||    
T  37073857 tcttaagactgaaaatatgtttatcatatcaaattatgtggggaaaatgtacat 37073804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 37077416 - 37077363
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||| |||||||||||||||| | |||| ||||||||||||||||||||||    
T  37077416 tcttaagcctgaaaatatgtttatcatatcaaattatgtggggagaatgtacat 37077363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 28830566 - 28830518
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||||||||     |||||||||||||||||||||||||    
T  28830566 tcttaagactgaaaatatgtttat-----catattatgtggggagaatgtacat 28830518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 46240545 - 46240596
Alignment:
Q  41 ttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||| |||||||||||||| || | ||||||||||| |||||||||||||    
T  46240545 ttaagattgaaaatatgtttaatataccatattatgtgaggagaatgtacat 46240596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 56135218 - 56135275
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaa-cttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| |||||||| ||||||||||||||    
T  56135218 aatcaatacaatgactagtggagttaaaactaaatagtcacaatcttttcaatatctc 56135275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 4132430 - 4132522
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  4132430 tcctagttaatccctaattaataaggaagattaatcaatacaataaatagtgaagttaaaactaaatagtcacaacttttcaatatctcaaca 4132522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 186
Target Start/End: Complemental strand, 26775708 - 26775545
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacatgt----------------cctagttaatccccaattaatagggaag 122  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |                ||||||||||||| ||||||||  ||||    
T  26775708 tcttaagactgaaaatatgtttattatatcatattatgcggggagaatgtacatttatataggtaggactctcctagttaatccctaattaataaagaag 26775609  T
Q  123 attaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||||||||||||  || ||||||||||| || ||||||||||||||||||||||    
T  26775608 attaatcaatacaataaatagtttagttaaaactaaactgtaacaacttttcaatatctcaaca 26775545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 32663051 - 32663101
Alignment:
Q  136 ataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  32663051 ataaatagtgaagttaaaactaaatagttacaacttttcaatatctcaaca 32663101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 4132359 - 4132412
Alignment:
Q  40 cttaagactgaaaatatgtttattacatcatattatgt-ggggagaatgtacat 92  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  4132359 cttaagactgaaaatatgtttatcatatcatattatgtgggggagaatgtacat 4132412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 12509476 - 12509430
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  12509476 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 12509430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 14676450 - 14676496
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  14676450 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 14676496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 14681294 - 14681340
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  14681294 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 14681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 35753536 - 35753490
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  35753536 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 35753490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 12504568 - 12504471
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  12504568 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 12504471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 12509412 - 12509315
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  12509412 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 12509315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 39587449 - 39587396
Alignment:
Q  129 caatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    ||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  39587449 caatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 39587396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 39591852 - 39591755
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata---------gtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||         ||| || |||||||||| ||| ||||||||||||||||||    
T  39591852 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatgactagtggagttaaaactaaatagttacaacttttcaatatctc 39591755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 14676514 - 14676562
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  14676514 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 14676562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 14681358 - 14681406
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  14681358 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 14681406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 35753472 - 35753424
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  35753472 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 35753424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 12504632 - 12504586
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  12504632 actgaaaatatgtttattatatcatattatatggtgagagtgtacat 12504586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 32667663 - 32667720
Alignment:
Q  131 atacaataaatagtgaagataaaactaaaca--gtcacaacttttcaatatctcaaca 186  Q
    |||||||| ||||| ||| |||||||||| |  |||||||||||||||||||||||||    
T  32667663 atacaatatatagttaagttaaaactaaatatagtcacaacttttcaatatctcaaca 32667720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 32667555 - 32667608
Alignment:
Q  40 cttaagactgaaaatatgtttattacatcatattatgt-ggggagaatgtacat 92  Q
    ||||||| |||||||||||| || | |||||||||||| |||||||||||||||    
T  32667555 cttaagattgaaaatatgttaatcatatcatattatgtgggggagaatgtacat 32667608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 27414764 - 27414674
Alignment:
Q  97 tagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaacag 187  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  27414764 tagttaatccctaattaataaggaagattaatcaatacaataaatagtgaagttaaaactaaatagtgacaacttttcaatatctcaacag 27414674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 8475840 - 8475937
Alignment:
Q  98 agttaatccccaattaatagggaagattaatc---------aatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctcaaca 186  Q
    ||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8475840 agttaatccccaaataatagggaagattaatcaatacaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaacatctcaaca 8475937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 2355000 - 2354901
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaa------taaatagtgaagataaaactaaacagtcacaacttttcaatatctcaacag 187  Q
    |||||||||||||| |||||||| |||||||||||||||||||      |||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  2355000 tcctagttaatccctaattaataaggaagattaatcaatacaaatacaataaatagtgaagttaaaactaaatagtcacaacttttcaatatatcaacag 2354901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 18898920 - 18898976
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||||||||||||||||||||||||||    
T  18898920 aatcaatacaatgactagtggagttaaaactaaacagtcacaacttttcaatatctc 18898976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 18898815 - 18898861
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  18898815 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 18898861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 20793362 - 20793316
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  20793362 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 20793316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 44197809 - 44197763
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  44197809 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 44197763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 44202651 - 44202605
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  44202651 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 44202605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 43901125 - 43901178
Alignment:
Q  129 caatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    ||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  43901125 caatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 43901178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 1067935 - 1067983
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  1067935 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 1067983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 40444317 - 40444269
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  40444317 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 40444269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 44197745 - 44197697
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  44197745 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 44197697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 44202587 - 44202539
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata 142  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  44202587 tcctagttaacccctaattaataaggaagattaatcaatacaatcaata 44202539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 1067866 - 1067917
Alignment:
Q  41 ttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||| |||||||||||||||||||  ||||||||||||| |||| |||||||    
T  1067866 ttaaaactgaaaatatgtttattatttcatattatgtggtgagagtgtacat 1067917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 2355071 - 2355018
Alignment:
Q  39 tcttaagactgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||| |||| ||||||||| | |||| |||||||| |||||||||||||    
T  2355071 tcttaagaccgaaattatgtttatcatatcaaattatgtgaggagaatgtacat 2355018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 18898881 - 18898922
Alignment:
Q  96 ctagttaatccccaattaatagggaagattaatcaatacaat 137  Q
    |||||||| ||| |||||||| ||||||||||||||||||||    
T  18898881 ctagttaacccctaattaataaggaagattaatcaatacaat 18898922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 6)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 164052 - 163964
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| ||||||| |||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  164052 tcctagttaacccctaattaataaggaagatcaatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 163964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 173425 - 173379
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  173425 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 173379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 143555 - 143458
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaata---------gtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||||         ||| || |||||||||| ||| ||||||||||||||||||    
T  143555 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatgactagtggagttaaaactaaatagtaacaacttttcaatatctc 143458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 173361 - 173264
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  173361 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 173264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 143619 - 143573
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||||||||  ||||||||||||| |||| |||||||    
T  143619 actgaaaatatgtttattatgtcatattatgtggtgagagtgtacat 143573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 164116 - 164070
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    |||||||||||||||||||  ||||||||||||| |||| |||||||    
T  164116 actgaaaatatgtttattatgtcatattatgtggtgagagtgtacat 164070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 31826 - 31770
Alignment:
Q  126 aatcaatacaataaatagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||||| | ||||| || |||||||||| ||||||||||||||||||||||    
T  31826 aatcaatacaatgactagtggagttaaaactaaatagtcacaacttttcaatatctc 31770  T

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Target: scaffold0167; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 31931 - 31885
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||| | |||| |||||||    
T  31931 actgaaaatatgtttattatatcatattatgttgtgagagtgtacat 31885  T

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Target: scaffold0167; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 31865 - 31824
Alignment:
Q  96 ctagttaatccccaattaatagggaagattaatcaatacaat 137  Q
    |||||||| ||| |||||||| ||||||||||||||||||||    
T  31865 ctagttaacccctaattaataaggaagattaatcaatacaat 31824  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 26846634 - 26846729
Alignment:
Q  96 ctagttaatccccaattaatagggaagattaatcaatacaataaata---------gtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||| ||| |||||||| |||||||||||||||||||| ||||         ||| || |||||||||| ||||||||||||||||||||||    
T  26846634 ctagttaacccctaattaataaggaagattaatcaatacaatgaatacaatgattggtggagttaaaactaaatagtcacaacttttcaatatctc 26846729  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 29651687 - 29651641
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  29651687 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 29651641  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 29656531 - 29656485
Alignment:
Q  46 actgaaaatatgtttattacatcatattatgtggggagaatgtacat 92  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  29656531 actgaaaatatgtttattatatcatattatgtggtgagagtgtacat 29656485  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 29651623 - 29651526
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  29651623 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 29651526  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 29656467 - 29656370
Alignment:
Q  94 tcctagttaatccccaattaatagggaagattaatcaatacaataaa---------tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    |||||||||| ||| |||||||| |||||||||||||||||||| ||         ||||| || | |||||||| ||||||||||||||||||||||    
T  29656467 tcctagttaacccctaattaataaggaagattaatcaatacaatcaatacaatggctagtggagttgaaactaaatagtcacaacttttcaatatctc 29656370  T

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Target: scaffold1270 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1270
Description:

Target: scaffold1270; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 7 - 48
Alignment:
Q  141 tagtgaagataaaactaaacagtcacaacttttcaatatctc 182  Q
    ||||| || |||||||||| ||||||||||||||||||||||    
T  7 tagtggagttaaaactaaatagtcacaacttttcaatatctc 48  T

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