View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16369_low_7 (Length: 361)

Name: NF16369_low_7
Description: NF16369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16369_low_7
NF16369_low_7
[»] chr7 (69 HSPs)
chr7 (252-361)||(43266584-43266693)
chr7 (251-361)||(32934666-32934776)
chr7 (252-361)||(43266265-43266374)
chr7 (253-361)||(42617911-42618019)
chr7 (251-361)||(27138259-27138369)
chr7 (253-361)||(25453128-25453236)
chr7 (256-361)||(32068099-32068204)
chr7 (252-361)||(33828292-33828401)
chr7 (256-361)||(42618229-42618334)
chr7 (256-360)||(10600268-10600372)
chr7 (253-361)||(32068414-32068522)
chr7 (255-361)||(25628796-25628902)
chr7 (251-361)||(28890577-28890687)
chr7 (251-361)||(32934346-32934456)
chr7 (256-361)||(46204424-46204529)
chr7 (253-361)||(22081560-22081667)
chr7 (251-361)||(23058747-23058857)
chr7 (256-361)||(25628481-25628586)
chr7 (253-361)||(22081877-22081985)
chr7 (253-361)||(23058429-23058537)
chr7 (256-361)||(39274873-39274978)
chr7 (267-361)||(10935808-10935902)
chr7 (251-360)||(6571011-6571120)
chr7 (256-361)||(25453446-25453551)
chr7 (252-361)||(27396915-27397024)
chr7 (252-361)||(28469328-28469437)
chr7 (262-357)||(13044681-13044776)
chr7 (251-361)||(17102018-17102128)
chr7 (250-360)||(19204486-19204596)
chr7 (251-361)||(22871597-22871707)
chr7 (272-361)||(6253490-6253579)
chr7 (272-361)||(32299025-32299114)
chr7 (252-360)||(32680594-32680702)
chr7 (272-361)||(42731438-42731527)
chr7 (272-359)||(16803967-16804054)
chr7 (252-361)||(32680884-32680993)
chr7 (253-314)||(10600026-10600087)
chr7 (252-361)||(45010924-45011033)
chr7 (262-361)||(2640498-2640597)
chr7 (262-361)||(23181314-23181413)
chr7 (262-361)||(40379778-40379877)
chr7 (251-361)||(27991737-27991847)
chr7 (251-361)||(46205627-46205737)
chr7 (262-357)||(13050104-13050200)
chr7 (265-361)||(18855974-18856070)
chr7 (262-361)||(32688538-32688637)
chr7 (287-361)||(43124472-43124546)
chr7 (252-361)||(5457227-5457336)
chr7 (253-361)||(42362450-42362558)
chr7 (251-361)||(30948449-30948559)
chr7 (252-314)||(22828185-22828246)
chr7 (251-285)||(33828187-33828221)
chr7 (307-361)||(48789123-48789177)
chr7 (262-315)||(18087704-18087757)
chr7 (81-134)||(26752010-26752063)
chr7 (251-312)||(34928648-34928709)
chr7 (309-361)||(3914194-3914246)
chr7 (252-312)||(34928988-34929048)
chr7 (252-312)||(39686872-39686932)
chr7 (262-361)||(24388828-24388927)
chr7 (262-361)||(37656861-37656960)
chr7 (262-361)||(42019917-42020016)
chr7 (79-126)||(42709956-42710003)
chr7 (252-361)||(29144302-29144411)
chr7 (262-311)||(18086298-18086347)
chr7 (252-360)||(20426651-20426759)
chr7 (262-310)||(23608817-23608865)
chr7 (251-315)||(24389151-24389215)
chr7 (262-314)||(32687406-32687458)
[»] chr4 (97 HSPs)
chr4 (251-361)||(54858558-54858668)
chr4 (250-361)||(3032579-3032690)
chr4 (251-361)||(27069228-27069338)
chr4 (251-361)||(54858878-54858988)
chr4 (253-361)||(10407889-10407997)
chr4 (253-361)||(10408207-10408315)
chr4 (255-361)||(45463075-45463181)
chr4 (252-361)||(27068909-27069018)
chr4 (256-361)||(39701227-39701332)
chr4 (251-359)||(52573548-52573656)
chr4 (251-361)||(22987169-22987279)
chr4 (251-361)||(27149314-27149423)
chr4 (252-361)||(27891583-27891692)
chr4 (252-361)||(52573227-52573336)
chr4 (251-361)||(22717937-22718047)
chr4 (256-361)||(5818093-5818198)
chr4 (256-361)||(11523952-11524057)
chr4 (252-361)||(16605601-16605710)
chr4 (17-134)||(44137541-44137658)
chr4 (252-361)||(50504143-50504252)
chr4 (256-360)||(45463392-45463496)
chr4 (163-242)||(44137658-44137737)
chr4 (252-361)||(51859724-51859833)
chr4 (251-359)||(50503823-50503931)
chr4 (251-361)||(14801734-14801844)
chr4 (251-361)||(24711109-24711219)
chr4 (264-361)||(22923149-22923246)
chr4 (264-361)||(22927802-22927899)
chr4 (264-361)||(22984081-22984178)
chr4 (264-361)||(22997669-22997766)
chr4 (272-361)||(34765700-34765789)
chr4 (273-361)||(37248256-37248344)
chr4 (262-361)||(15507993-15508091)
chr4 (275-361)||(35508560-35508646)
chr4 (263-361)||(39700919-39701017)
chr4 (252-361)||(37976473-37976582)
chr4 (256-361)||(39667094-39667199)
chr4 (252-357)||(50751822-50751926)
chr4 (262-361)||(52909262-52909361)
chr4 (251-361)||(18831347-18831457)
chr4 (251-361)||(23613307-23613417)
chr4 (251-360)||(5368945-5369054)
chr4 (272-361)||(7451853-7451942)
chr4 (264-361)||(22718257-22718354)
chr4 (264-361)||(22986862-22986959)
chr4 (272-361)||(44967358-44967447)
chr4 (272-361)||(49879496-49879585)
chr4 (272-361)||(50418957-50419046)
chr4 (252-361)||(51692552-51692661)
chr4 (253-360)||(9400519-9400626)
chr4 (251-361)||(27934530-27934640)
chr4 (262-357)||(50750896-50750991)
chr4 (262-361)||(54087015-54087114)
chr4 (262-356)||(24411367-24411461)
chr4 (267-361)||(53701826-53701920)
chr4 (272-361)||(13058056-13058145)
chr4 (251-312)||(22567124-22567185)
chr4 (255-361)||(39666772-39666884)
chr4 (255-361)||(9400808-9400914)
chr4 (250-361)||(35028318-35028429)
chr4 (251-361)||(11448049-11448159)
chr4 (279-361)||(16005864-16005946)
chr4 (80-145)||(39051322-39051388)
chr4 (253-360)||(4982726-4982833)
chr4 (253-361)||(4983015-4983123)
chr4 (251-361)||(42738320-42738430)
chr4 (75-126)||(55264436-55264487)
chr4 (278-360)||(6237141-6237223)
chr4 (262-312)||(27934856-27934906)
chr4 (296-361)||(9731530-9731595)
chr4 (262-355)||(29321231-29321324)
chr4 (272-356)||(33247293-33247377)
chr4 (251-312)||(34837072-34837133)
chr4 (252-361)||(39539238-39539347)
chr4 (276-361)||(55867434-55867519)
chr4 (260-360)||(10203628-10203728)
chr4 (262-361)||(30641529-30641626)
chr4 (82-126)||(40942620-40942664)
chr4 (252-312)||(42738030-42738090)
chr4 (252-312)||(51203608-51203668)
chr4 (80-135)||(7403254-7403309)
chr4 (262-360)||(9144775-9144873)
chr4 (251-361)||(9145055-9145165)
chr4 (262-361)||(11446279-11446378)
chr4 (262-361)||(17356242-17356341)
chr4 (251-361)||(32950140-32950250)
chr4 (253-312)||(38012508-38012567)
chr4 (252-361)||(22566798-22566907)
chr4 (256-361)||(33247562-33247667)
chr4 (291-361)||(36009133-36009203)
chr4 (279-361)||(43155816-43155898)
chr4 (251-361)||(53129826-53129936)
chr4 (262-359)||(32063658-32063755)
chr4 (80-120)||(25500460-25500500)
chr4 (252-312)||(32950480-32950540)
chr4 (252-300)||(34837424-34837472)
chr4 (80-145)||(45122541-45122608)
[»] chr2 (52 HSPs)
chr2 (251-361)||(8710786-8710896)
chr2 (253-361)||(28226062-28226170)
chr2 (254-361)||(41588376-41588483)
chr2 (251-361)||(15604337-15604447)
chr2 (254-361)||(11830365-11830472)
chr2 (251-361)||(15604657-15604767)
chr2 (251-361)||(8342497-8342607)
chr2 (256-357)||(6573050-6573150)
chr2 (252-357)||(6573542-6573647)
chr2 (256-361)||(8342190-8342295)
chr2 (250-361)||(41587232-41587342)
chr2 (267-361)||(44714081-44714175)
chr2 (272-361)||(11163343-11163432)
chr2 (252-361)||(36382160-36382269)
chr2 (253-357)||(25892394-25892498)
chr2 (262-361)||(15848097-15848196)
chr2 (250-356)||(34447810-34447916)
chr2 (262-361)||(2318168-2318266)
chr2 (262-361)||(6589679-6589778)
chr2 (274-361)||(16099076-16099163)
chr2 (272-361)||(39498329-39498418)
chr2 (251-360)||(45556110-45556219)
chr2 (253-361)||(22051313-22051421)
chr2 (262-361)||(10712732-10712831)
chr2 (275-361)||(36479740-36479826)
chr2 (267-361)||(39423529-39423623)
chr2 (272-361)||(6657897-6657986)
chr2 (252-312)||(14900495-14900555)
chr2 (251-331)||(14900800-14900880)
chr2 (262-314)||(28228679-28228731)
chr2 (262-361)||(202676-202775)
chr2 (262-361)||(28230059-28230158)
chr2 (251-361)||(33739701-33739811)
chr2 (262-361)||(37895667-37895766)
chr2 (262-361)||(39936567-39936665)
chr2 (251-360)||(1695738-1695847)
chr2 (291-361)||(36755131-36755201)
chr2 (284-357)||(6577601-6577674)
chr2 (251-312)||(33062048-33062109)
chr2 (251-312)||(33062388-33062449)
chr2 (252-312)||(13995672-13995732)
chr2 (252-312)||(13996011-13996071)
chr2 (262-361)||(6588692-6588791)
chr2 (262-357)||(43742000-43742095)
chr2 (251-361)||(3555248-3555358)
chr2 (264-361)||(3653400-3653496)
chr2 (262-314)||(199030-199082)
chr2 (309-357)||(25893542-25893590)
chr2 (253-361)||(30729621-30729729)
chr2 (252-312)||(33740041-33740101)
chr2 (251-315)||(36755454-36755518)
chr2 (252-312)||(41248897-41248957)
[»] chr1 (76 HSPs)
chr1 (252-361)||(40714761-40714870)
chr1 (252-361)||(31050949-31051058)
chr1 (252-361)||(37929417-37929526)
chr1 (252-361)||(40714443-40714552)
chr1 (253-361)||(17188954-17189062)
chr1 (253-361)||(30326496-30326604)
chr1 (253-360)||(49955347-49955454)
chr1 (251-361)||(8898835-8898945)
chr1 (252-361)||(20760823-20760932)
chr1 (256-361)||(35040932-35041037)
chr1 (252-361)||(49955665-49955774)
chr1 (253-357)||(17189173-17189277)
chr1 (251-361)||(8898515-8898625)
chr1 (251-361)||(45749840-45749950)
chr1 (252-361)||(12905977-12906086)
chr1 (252-361)||(45750160-45750269)
chr1 (252-361)||(28325122-28325230)
chr1 (250-361)||(31058375-31058486)
chr1 (251-361)||(28324803-28324912)
chr1 (251-361)||(7820952-7821062)
chr1 (253-361)||(6367562-6367670)
chr1 (251-315)||(25885357-25885421)
chr1 (255-361)||(44523456-44523562)
chr1 (252-361)||(32558425-32558534)
chr1 (252-361)||(36694568-36694677)
chr1 (252-361)||(36710669-36710778)
chr1 (253-361)||(40772507-40772615)
chr1 (252-360)||(41098732-41098840)
chr1 (262-361)||(46163039-46163138)
chr1 (251-360)||(28011658-28011767)
chr1 (256-361)||(7371293-7371398)
chr1 (252-361)||(23209647-23209756)
chr1 (256-361)||(35038458-35038563)
chr1 (253-361)||(34464449-34464557)
chr1 (252-360)||(35152342-35152450)
chr1 (262-361)||(40210690-40210789)
chr1 (250-320)||(7371528-7371598)
chr1 (267-361)||(24009861-24009955)
chr1 (272-361)||(14878990-14879079)
chr1 (252-361)||(19515818-19515927)
chr1 (252-360)||(24905166-24905274)
chr1 (272-361)||(32917279-32917368)
chr1 (252-360)||(34464770-34464878)
chr1 (262-361)||(13914387-13914486)
chr1 (274-357)||(26024444-26024527)
chr1 (250-361)||(37578512-37578623)
chr1 (275-361)||(1841481-1841567)
chr1 (251-361)||(17662170-17662280)
chr1 (251-361)||(25647882-25647992)
chr1 (262-361)||(17692505-17692604)
chr1 (262-361)||(42248482-42248581)
chr1 (262-361)||(1103468-1103569)
chr1 (307-361)||(43758876-43758930)
chr1 (252-360)||(5734009-5734116)
chr1 (272-360)||(19017950-19018038)
chr1 (262-361)||(4960549-4960648)
chr1 (262-361)||(17691228-17691327)
chr1 (272-358)||(47999415-47999501)
chr1 (252-297)||(25884700-25884745)
chr1 (80-188)||(6219602-6219710)
chr1 (80-153)||(15395423-15395498)
chr1 (253-361)||(30711327-30711435)
chr1 (262-361)||(33442883-33442982)
chr1 (81-145)||(7790298-7790364)
chr1 (262-361)||(10304175-10304274)
chr1 (253-312)||(52134406-52134465)
chr1 (291-361)||(183511-183581)
chr1 (252-314)||(44522146-44522208)
chr1 (262-331)||(4716477-4716546)
chr1 (272-361)||(34849030-34849119)
chr1 (272-361)||(34850385-34850474)
chr1 (267-315)||(13914082-13914130)
chr1 (262-314)||(32132313-32132365)
chr1 (262-310)||(42533033-42533081)
chr1 (253-361)||(46899061-46899169)
chr1 (252-312)||(52134067-52134127)
[»] scaffold0006 (2 HSPs)
scaffold0006 (252-361)||(222107-222216)
scaffold0006 (256-361)||(221794-221898)
[»] chr8 (72 HSPs)
chr8 (252-361)||(7983427-7983536)
chr8 (252-361)||(35634417-35634526)
chr8 (255-361)||(44664826-44664932)
chr8 (253-361)||(25124881-25124989)
chr8 (251-361)||(15230249-15230359)
chr8 (256-361)||(10445653-10445758)
chr8 (255-359)||(8998009-8998113)
chr8 (253-361)||(15229931-15230039)
chr8 (253-361)||(44664508-44664616)
chr8 (250-361)||(25124560-25124671)
chr8 (251-361)||(37542222-37542332)
chr8 (251-361)||(42945432-42945542)
chr8 (252-361)||(234058-234167)
chr8 (252-361)||(710469-710578)
chr8 (252-361)||(747681-747790)
chr8 (252-361)||(871576-871685)
chr8 (255-361)||(21432695-21432801)
chr8 (251-361)||(41353891-41354001)
chr8 (256-361)||(6471693-6471798)
chr8 (256-361)||(37542543-37542648)
chr8 (256-361)||(41353577-41353682)
chr8 (253-361)||(39071676-39071784)
chr8 (256-343)||(8997859-8997946)
chr8 (251-361)||(4994977-4995086)
chr8 (251-361)||(40318284-40318394)
chr8 (251-361)||(13186058-13186168)
chr8 (272-361)||(8316908-8316997)
chr8 (256-361)||(27500092-27500197)
chr8 (253-361)||(16388846-16388954)
chr8 (252-360)||(11674984-11675092)
chr8 (272-361)||(23663834-23663923)
chr8 (272-361)||(23698564-23698653)
chr8 (252-360)||(23505051-23505159)
chr8 (251-333)||(38003752-38003834)
chr8 (291-360)||(6472009-6472078)
chr8 (272-361)||(12273173-12273262)
chr8 (272-361)||(36928495-36928584)
chr8 (252-360)||(23507746-23507854)
chr8 (262-361)||(2535870-2535969)
chr8 (253-299)||(6472395-6472441)
chr8 (252-361)||(11674694-11674803)
chr8 (252-361)||(36186387-36186493)
chr8 (251-359)||(22915680-22915788)
chr8 (285-361)||(38003487-38003563)
chr8 (286-361)||(39474579-39474654)
chr8 (267-361)||(31608833-31608927)
chr8 (251-360)||(36325524-36325633)
chr8 (262-314)||(10749875-10749927)
chr8 (253-361)||(38862618-38862726)
chr8 (253-357)||(42803542-42803646)
chr8 (297-361)||(42945158-42945222)
chr8 (251-361)||(36325232-36325342)
chr8 (296-354)||(21433018-21433076)
chr8 (265-335)||(27500422-27500492)
chr8 (252-361)||(38845588-38845697)
chr8 (272-361)||(1425342-1425430)
chr8 (251-312)||(2266830-2266891)
chr8 (262-327)||(11763030-11763095)
chr8 (276-361)||(35756606-35756690)
chr8 (272-361)||(38955722-38955811)
chr8 (273-361)||(40775939-40776027)
chr8 (251-361)||(34061648-34061758)
chr8 (262-312)||(44406866-44406916)
chr8 (251-300)||(2266490-2266539)
chr8 (77-126)||(12220821-12220870)
chr8 (252-357)||(34060488-34060593)
chr8 (273-361)||(35449898-35449986)
chr8 (251-300)||(40775648-40775697)
chr8 (253-361)||(2534695-2534803)
chr8 (253-361)||(4405980-4406088)
chr8 (267-355)||(9337040-9337128)
chr8 (17-49)||(23768886-23768918)
[»] chr6 (47 HSPs)
chr6 (256-361)||(22502777-22502882)
chr6 (251-361)||(22503092-22503202)
chr6 (252-361)||(21836348-21836457)
chr6 (256-361)||(31407196-31407301)
chr6 (253-361)||(6517503-6517610)
chr6 (254-361)||(7905244-7905351)
chr6 (256-361)||(7160807-7160912)
chr6 (252-361)||(7161122-7161231)
chr6 (256-361)||(21836035-21836139)
chr6 (252-361)||(32593489-32593598)
chr6 (253-361)||(31406878-31406986)
chr6 (251-361)||(7905561-7905671)
chr6 (256-361)||(15913551-15913656)
chr6 (251-360)||(14196613-14196722)
chr6 (251-360)||(21628034-21628143)
chr6 (272-361)||(30337468-30337557)
chr6 (262-361)||(33517543-33517642)
chr6 (252-314)||(10781146-10781208)
chr6 (256-361)||(12065223-12065328)
chr6 (254-361)||(14196904-14197011)
chr6 (267-361)||(12080650-12080744)
chr6 (262-360)||(28498346-28498444)
chr6 (256-360)||(25485956-25486060)
chr6 (281-361)||(11392866-11392946)
chr6 (253-361)||(30725760-30725867)
chr6 (262-361)||(3059266-3059365)
chr6 (251-361)||(28000674-28000784)
chr6 (262-361)||(30803870-30803969)
chr6 (272-358)||(8418359-8418445)
chr6 (252-314)||(15913913-15913975)
chr6 (272-360)||(17734484-17734572)
chr6 (251-361)||(8089441-8089551)
chr6 (262-360)||(29810757-29810855)
chr6 (251-312)||(362868-362929)
chr6 (287-360)||(10781477-10781550)
chr6 (250-361)||(25486215-25486326)
chr6 (253-312)||(363168-363227)
chr6 (272-315)||(30337784-30337827)
chr6 (267-361)||(33646977-33647071)
chr6 (262-315)||(15116598-15116651)
chr6 (251-312)||(22373026-22373087)
chr6 (276-361)||(26463202-26463287)
chr6 (262-314)||(141107-141159)
chr6 (262-314)||(149128-149180)
chr6 (251-315)||(3059622-3059686)
chr6 (272-360)||(8090248-8090336)
chr6 (251-315)||(33517900-33517964)
[»] chr3 (69 HSPs)
chr3 (251-361)||(32306422-32306532)
chr3 (251-361)||(37778591-37778701)
chr3 (250-361)||(29118856-29118967)
chr3 (251-361)||(3469198-3469308)
chr3 (251-361)||(3596107-3596217)
chr3 (255-361)||(29685943-29686049)
chr3 (251-361)||(40788738-40788848)
chr3 (251-361)||(47551491-47551601)
chr3 (251-361)||(52032457-52032567)
chr3 (252-361)||(13948779-13948888)
chr3 (256-361)||(32306742-32306847)
chr3 (253-361)||(10294567-10294675)
chr3 (252-359)||(3469520-3469627)
chr3 (251-360)||(33506269-33506378)
chr3 (256-361)||(40788423-40788528)
chr3 (255-361)||(11910701-11910807)
chr3 (267-361)||(35643865-35643959)
chr3 (255-360)||(29686259-29686364)
chr3 (256-361)||(33156314-33156419)
chr3 (256-361)||(41421975-41422080)
chr3 (256-361)||(52032141-52032246)
chr3 (251-361)||(10294877-10294987)
chr3 (255-343)||(29118529-29118617)
chr3 (272-361)||(2796198-2796287)
chr3 (251-361)||(43998143-43998253)
chr3 (253-361)||(9294278-9294386)
chr3 (252-357)||(4322591-4322695)
chr3 (252-360)||(36314297-36314405)
chr3 (272-361)||(51994206-51994295)
chr3 (255-323)||(33506180-33506248)
chr3 (253-361)||(42855625-42855733)
chr3 (250-361)||(19741212-19741323)
chr3 (253-303)||(13949071-13949121)
chr3 (291-361)||(43384321-43384391)
chr3 (256-360)||(10770493-10770597)
chr3 (252-361)||(23458299-23458408)
chr3 (252-361)||(33689699-33689808)
chr3 (252-361)||(42342790-42342899)
chr3 (289-361)||(10307693-10307765)
chr3 (262-357)||(4323526-4323621)
chr3 (262-360)||(46474824-46474922)
chr3 (262-360)||(47856396-47856494)
chr3 (252-361)||(48322666-48322775)
chr3 (253-361)||(36314587-36314695)
chr3 (253-361)||(40758147-40758252)
chr3 (252-360)||(48322376-48322484)
chr3 (252-360)||(40033777-40033885)
chr3 (262-361)||(40506107-40506207)
chr3 (262-361)||(9368621-9368720)
chr3 (256-361)||(10770780-10770885)
chr3 (253-327)||(33154877-33154951)
chr3 (262-314)||(43607789-43607841)
chr3 (262-361)||(1079541-1079640)
chr3 (262-361)||(6956257-6956356)
chr3 (266-304)||(3596448-3596486)
chr3 (252-361)||(8041615-8041724)
chr3 (291-361)||(55052568-55052638)
chr3 (262-315)||(23276349-23276402)
chr3 (73-126)||(33429106-33429159)
chr3 (262-314)||(1078546-1078598)
chr3 (262-361)||(21186015-21186114)
chr3 (262-361)||(32431512-32431611)
chr3 (262-312)||(54466432-54466482)
chr3 (262-312)||(54466761-54466811)
chr3 (76-126)||(55447172-55447222)
chr3 (76-133)||(16298224-16298281)
chr3 (251-300)||(25107211-25107260)
chr3 (252-300)||(40758491-40758539)
chr3 (69-105)||(48338529-48338565)
[»] scaffold0771 (2 HSPs)
scaffold0771 (252-361)||(919-1028)
scaffold0771 (253-303)||(1211-1261)
[»] scaffold0388 (2 HSPs)
scaffold0388 (256-361)||(12557-12662)
scaffold0388 (256-361)||(12249-12348)
[»] scaffold0328 (2 HSPs)
scaffold0328 (252-361)||(11458-11567)
scaffold0328 (256-361)||(11143-11248)
[»] chr5 (63 HSPs)
chr5 (252-360)||(17544367-17544475)
chr5 (253-361)||(33871339-33871447)
chr5 (253-361)||(8875449-8875557)
chr5 (251-361)||(33871656-33871766)
chr5 (253-361)||(20152781-20152889)
chr5 (251-354)||(3656743-3656846)
chr5 (252-361)||(20153236-20153342)
chr5 (252-361)||(5993888-5993997)
chr5 (268-361)||(22298557-22298650)
chr5 (262-361)||(5024338-5024437)
chr5 (267-361)||(38475319-38475413)
chr5 (251-360)||(16157176-16157285)
chr5 (277-361)||(35920504-35920588)
chr5 (262-361)||(35512157-35512256)
chr5 (262-361)||(39453309-39453408)
chr5 (251-361)||(11761747-11761857)
chr5 (251-361)||(24547445-24547555)
chr5 (262-314)||(8875632-8875684)
chr5 (253-361)||(21287975-21288083)
chr5 (251-361)||(6758154-6758264)
chr5 (262-361)||(16082986-16083085)
chr5 (262-361)||(38442077-38442176)
chr5 (251-361)||(6150452-6150562)
chr5 (262-360)||(13362549-13362647)
chr5 (267-361)||(17202413-17202507)
chr5 (282-360)||(17544077-17544155)
chr5 (272-361)||(3529162-3529251)
chr5 (272-361)||(13962883-13962972)
chr5 (272-361)||(27587167-27587256)
chr5 (275-360)||(30005175-30005260)
chr5 (252-360)||(20814456-20814564)
chr5 (262-361)||(19892628-19892727)
chr5 (262-361)||(24141461-24141560)
chr5 (267-361)||(29646682-29646775)
chr5 (252-361)||(14194743-14194851)
chr5 (250-361)||(18670199-18670307)
chr5 (262-361)||(18247095-18247192)
chr5 (252-360)||(20840532-20840640)
chr5 (274-361)||(186440-186527)
chr5 (262-361)||(32242251-32242350)
chr5 (251-361)||(41930514-41930624)
chr5 (250-360)||(41930806-41930916)
chr5 (272-361)||(28771158-28771247)
chr5 (271-331)||(6757883-6757943)
chr5 (250-361)||(31482691-31482802)
chr5 (262-314)||(40150181-40150233)
chr5 (251-361)||(11047436-11047545)
chr5 (307-361)||(21287797-21287851)
chr5 (252-312)||(297013-297073)
chr5 (252-312)||(1505966-1506026)
chr5 (251-315)||(39453665-39453729)
chr5 (75-126)||(8840009-8840060)
chr5 (253-312)||(31482402-31482461)
chr5 (262-312)||(1506305-1506355)
chr5 (252-310)||(6150791-6150849)
chr5 (76-126)||(9637660-9637710)
chr5 (252-361)||(21265461-21265571)
chr5 (86-132)||(33676573-33676619)
chr5 (80-122)||(36184730-36184772)
chr5 (79-128)||(15376573-15376622)
chr5 (324-361)||(28269708-28269745)
chr5 (262-355)||(40148907-40149000)
chr5 (262-361)||(297303-297402)
[»] scaffold0599 (1 HSPs)
scaffold0599 (255-361)||(2395-2501)
[»] scaffold0042 (1 HSPs)
scaffold0042 (255-361)||(12098-12204)
[»] scaffold0031 (1 HSPs)
scaffold0031 (253-361)||(68965-69073)
[»] scaffold0005 (1 HSPs)
scaffold0005 (251-361)||(37883-37993)
[»] scaffold0008 (1 HSPs)
scaffold0008 (262-361)||(239871-239970)
[»] scaffold0205 (1 HSPs)
scaffold0205 (251-360)||(21007-21116)
[»] scaffold0007 (1 HSPs)
scaffold0007 (272-361)||(1788-1877)
[»] scaffold0128 (1 HSPs)
scaffold0128 (262-361)||(19866-19965)
[»] scaffold0020 (1 HSPs)
scaffold0020 (272-361)||(139691-139780)
[»] scaffold0775 (1 HSPs)
scaffold0775 (262-361)||(6298-6397)
[»] scaffold0559 (1 HSPs)
scaffold0559 (273-361)||(1253-1341)
[»] scaffold0024 (1 HSPs)
scaffold0024 (252-361)||(141883-141992)
[»] scaffold0707 (1 HSPs)
scaffold0707 (251-315)||(6445-6509)


Alignment Details
Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 43266693 - 43266584
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||    
T  43266693 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcat 43266594  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  43266593 ttaaaatttc 43266584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 32934776 - 32934666
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||  || |||||||||||||    
T  32934776 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatca 32934677  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  32934676 tttaaaatttc 32934666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 43266265 - 43266374
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||| || ||||||||||||||    
T  43266265 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcat 43266364  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  43266365 ttaaaatttc 43266374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 42617911 - 42618019
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||||| || |||||||||||||||    
T  42617911 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatcatt 42618010  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  42618011 taaaatttc 42618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 27138369 - 27138259
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||| || |||||||||||||    
T  27138369 aaggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatca 27138270  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  27138269 tttaaaatttc 27138259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 25453128 - 25453236
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||||| || |||| ||||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatt 25453227  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  25453228 taaaatttc 25453236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 32068099 - 32068204
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32068198  T
Q  356 aatttc 361  Q
    ||||||    
T  32068199 aatttc 32068204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 33828401 - 33828292
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||  ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  33828401 aggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 33828302  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  33828301 ttaaaatttc 33828292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 42618334 - 42618229
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  42618334 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 42618235  T
Q  356 aatttc 361  Q
    ||||||    
T  42618234 aatttc 42618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 10600372 - 10600268
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| || ||||||||||||||| ||    
T  10600372 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcattcaa 10600273  T
Q  356 aattt 360  Q
    |||||    
T  10600272 aattt 10600268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 32068522 - 32068414
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatt 32068423  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  32068422 taaaatttc 32068414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 255 - 361
Target Start/End: Complemental strand, 25628902 - 25628796
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||||||||  ||||||||| ||| ||||||||||||| || |||||||||||||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 25628803  T
Q  355 aaatttc 361  Q
    |||||||    
T  25628802 aaatttc 25628796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 28890577 - 28890687
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||  ||||||||| || |||||||||||||    
T  28890577 aaggtttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatca 28890676  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  28890677 tttaaaatttc 28890687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 32934346 - 32934456
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| ||||||||| |||||||||||||| ||||||||||||||||||  ||||||||| ||| ||||||||||||| || |||||||||||||    
T  32934346 aaggtttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 32934445  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  32934446 tttaaaatttc 32934456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 46204424 - 46204529
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||| || |||| ||| |||||||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcatttaa 46204523  T
Q  356 aatttc 361  Q
    ||||||    
T  46204524 aatttc 46204529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 22081560 - 22081667
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||| ||| ||||||||| || |||||||||||||||    
T  22081560 ggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtcc-tctaatcgctaatgctggcaatttacccttgcattgtttaatcatt 22081658  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  22081659 taaaatttc 22081667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 23058857 - 23058747
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||||||||  ||| ||| ||||||||| |  |||||||||||||    
T  23058857 aaggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatca 23058758  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  23058757 tttaaaatttc 23058747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 25628481 - 25628586
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||  ||| ||| ||||||||| || ||||||||||||||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaa 25628580  T
Q  356 aatttc 361  Q
    ||||||    
T  25628581 aatttc 25628586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 22081985 - 22081877
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||||   ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  22081985 ggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 22081886  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  22081885 taaaatttc 22081877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 23058429 - 23058537
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||||  | ||| ||| |||| |||| || |||||||||||||||    
T  23058429 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattgcattgtttaatcatt 23058528  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  23058529 taaaatttc 23058537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 39274873 - 39274978
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||  ||||||||| ||| ||   ||||||||||| ||||||||||||||||||    
T  39274873 ttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgcattgtttaatcatttaa 39274972  T
Q  356 aatttc 361  Q
    ||||||    
T  39274973 aatttc 39274978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 10935808 - 10935902
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  10935808 tttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10935902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 6571011 - 6571120
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| ||||||||  ||| ||||||||||||| || |||||||||||||    
T  6571011 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatca 6571110  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  6571111 tttaaaattt 6571120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 25453551 - 25453446
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||| ||| ||||| ||||||||||||||||||||| || |||||| ||| ||  ||||||||| || ||||||||||||||||||    
T  25453551 ttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 25453452  T
Q  356 aatttc 361  Q
     |||||    
T  25453451 catttc 25453446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 27397024 - 27396915
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||||||||| |||  | ||||||||||||||    
T  27397024 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcat 27396925  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  27396924 ttaaaatttc 27396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 28469437 - 28469328
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||  ||| ||| ||||||||| || ||||||||||||||    
T  28469437 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 28469338  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  28469337 ttaaaatttc 28469328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 13044681 - 13044776
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaa 357  Q
    |||||| ||||||||||||||||||| ||||||||| || ||||  |||||||| | | ||||||||||||| || ||||||||||||||||||||    
T  13044681 atgtgtctcgtccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaatttaccattgcattgtttaatcatttaaaa 13044776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 17102018 - 17102128
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||  | |||||||||||||    
T  17102018 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatca 17102117  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  17102118 tttaaaatttc 17102128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 19204486 - 19204596
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||  |||| |||  |||||| ||||||| ||| |||||||||| |||| ||||||||  ||||||| ||||||||| || ||||||||||||    
T  19204486 gaaggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatc 19204585  T
Q  350 atttaaaattt 360  Q
    |||||||||||    
T  19204586 atttaaaattt 19204596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 22871707 - 22871597
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| |||||||||||||| |||| |||||| || ||| ||  ||||||||| || |||||||||||||    
T  22871707 aaggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatca 22871608  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  22871607 tttaaaatttc 22871597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 6253490 - 6253579
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  6253490 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 6253579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 32299114 - 32299025
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||| ||||||||    
T  32299114 tccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattgaaaatttc 32299025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 32680594 - 32680702
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||| || | |||||| || ||| ||||||||||| |||| | |||| |||||||    
T  32680594 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattg-ttaatca 32680692  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  32680693 tttaaaattt 32680702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 42731438 - 42731527
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  42731438 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 42731527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 359
Target Start/End: Complemental strand, 16804054 - 16803967
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatt 359  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||  ||||||||| || ||||||||||||||||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 32680993 - 32680884
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || ||||||||||||||||||| |||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||    
T  32680993 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattg-ttaatca 32680895  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  32680894 tttaaaatttc 32680884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 10600026 - 10600087
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  10600026 ggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcg 10600087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 45011033 - 45010924
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| || | |||| |||| ||| ||  ||||||||| || ||||||||||||||    
T  45011033 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcat 45010934  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  45010933 ttaaaatttc 45010924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 2640597 - 2640498
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||  ||||||| ||| |||||||||| | |  ||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||    
T  2640597 atgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 2640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 23181413 - 23181314
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| || ||||||||||| ||| |||||| ||| |||| ||||||||| |||  || ||||||||| || ||||||||||||||||||||||||    
T  23181413 atgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 23181314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 40379778 - 40379877
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||| |||  |||| |||| ||| ||  ||||||||||||  |||||||||||||||||||||||    
T  40379778 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaatttc 40379877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 27991737 - 27991847
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||| |||||  ||| ||||||||| ||| ||| |||||||||  | |||||||||||||    
T  27991737 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatca 27991836  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  27991837 tttaaaatttc 27991847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 46205737 - 46205627
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| ||||||||||| ||||||||||    ||||||||| ||| || | ||||||||  ||| ||||||| ||||| || |||||||||||||    
T  46205737 aaggtttaatgatgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgtttaatca 46205638  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  46205637 tttaaaatttc 46205627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 13050200 - 13050104
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcatttaaaa 357  Q
    ||||||||||||||||||||||||||| |||| ||| || |||| ||||||||  ||| |||  |||||| |||| | |||||||||||||||||||    
T  13050200 atgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttacccttgcaattgtttaatcatttaaaa 13050104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 18856070 - 18855974
Alignment:
Q  265 tgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| |||||||||| |||||||||||||| |||| ||||||||  |||  || ||| ||||| || ||  ||||||||||||||||||||    
T  18856070 tgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttc 18855974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 32688637 - 32688538
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| ||||||||||||| ||||||||||| || |||| ||||||||| ||| ||||||| || || || ||    ||||||||||||||||||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttc 32688538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 43124546 - 43124472
Alignment:
Q  287 gtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| |||| ||||||||| ||| || ||||  |||| || ||||||||||||||||||||||||    
T  43124546 gtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttc 43124472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 5457336 - 5457227
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| |||| |||  ||| ||  ||| ||||| || || |||||||||||    
T  5457336 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcat 5457237  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  5457236 ttaaaatttc 5457227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 42362450 - 42362558
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| |||| |||  ||| ||  ||| ||||| || |||| ||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatt 42362549  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  42362550 taaaatttc 42362558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 30948559 - 30948449
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatc 349  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| ||||||    
T  30948559 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatc 30948461  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  30948460 atttaaaatttc 30948449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 22828246 - 22828185
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||||||| |||||||||| |||||| ||||||| |||||||||||||| |||| ||||||||    
T  22828246 aggcttaa-aatgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcg 22828185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 33828187 - 33828221
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattagg 285  Q
    |||||||||||||||||||||||||||||||||||    
T  33828187 aaggcttaataatgtgtttcgtccttgcaattagg 33828221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 48789177 - 48789123
Alignment:
Q  307 tgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||  ||||||| ||||||||| || ||||||||||||||||||||||||    
T  48789177 tgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttc 48789123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 18087757 - 18087704
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||| ||||||||||||||| |||||||||||||| |||  |||||||||    
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgc 18087704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 26752010 - 26752063
Alignment:
Q  81 aattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtca 134  Q
    |||||||||||||||||||||||||  || || ||||||||| |||||||||||    
T  26752010 aattgaaaaacttttgacaaagacaaagactattttaaaataataacaaagtca 26752063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 34928648 - 34928709
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  34928648 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 34928709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 3914194 - 3914246
Alignment:
Q  309 taatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||| ||||||  |||||||| ||| ||||||||||||||||||||||||    
T  3914194 taatcgctaattctagcaatttacatttgcattgtttaatcatttaaaatttc 3914246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 34929048 - 34928988
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  34929048 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 34928988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 39686932 - 39686872
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  39686932 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 39686872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 24388828 - 24388927
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||| | ||| |||||||||| |||  |||| |||| |||  || ||||||||| ||  |||||||||||| ||||||||||    
T  24388828 atgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcacttaaaatttc 24388927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 37656861 - 37656960
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| ||||||||||||||  || |||||||||| |||  ||||||||| ||| ||  ||||||||  || ||||||||| | ||||||||||||    
T  37656861 atgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttatttatttaaaatttc 37656960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 42020016 - 42019917
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||  |||||||||| || | | ||||||| |||  || ||||||||  || ||||||||||| ||||||||||||    
T  42020016 atgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattatttaaaatttc 42019917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 42710003 - 42709956
Alignment:
Q  79 ttaattgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    |||||||| |||||||||||||||||| ||| || |||||||||||||    
T  42710003 ttaattgagaaacttttgacaaagacattgactattttaaaatattaa 42709956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 29144411 - 29144302
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcg-aattctgacaatttacctttccattgtttaatca 350  Q
    ||||||||  |||| |||||||| |||||||||| ||| |||||||||| |||  | ||||||   ||| ||  ||| |||||||| |||||||||||||    
T  29144411 aggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtca-tataatcgtttaatccttgcaacttacctttgcattgtttaatca 29144313  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  29144312 tttaaaatttc 29144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 18086298 - 18086347
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaa 311  Q
    |||||||| ||||||||||||||| ||| |||||||||| |||| |||||    
T  18086298 atgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaa 18086347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 20426759 - 20426651
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| ||| |||||||||  ||| |||||||||| |||| |||| |||| ||| ||| || |||||| |  ||  ||||||||||    
T  20426759 aggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcat 20426660  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  20426659 ttaaaattt 20426651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 23608817 - 23608865
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgta 310  Q
    |||||||| |||||||||| |||| |||||||||||||| |||| ||||    
T  23608817 atgtgtttagtccttgcaaataggggtcatttaaaaattggtccctgta 23608865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 24389215 - 24389151
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| |||| ||||    
T  24389215 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgc 24389151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 32687406 - 32687458
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||||||| ||||||| ||||||| ||||||||||| || |||| ||||||||    
T  32687406 atgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcg 32687458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 54858558 - 54858668
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| || |||||||||||||    
T  54858558 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 54858657  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  54858658 tttaaaatttc 54858668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 3032579 - 3032690
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| || ||||||||||||    
T  3032579 gaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatc 3032678  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  3032679 atttaaaatttc 3032690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 27069338 - 27069228
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||| ||||||||| || |||||||||||||    
T  27069338 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 27069239  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  27069238 tttaaaatttc 27069228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 54858988 - 54858878
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| || |||||||||||||    
T  54858988 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatca 54858889  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  54858888 tttaaaatttc 54858878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 10407889 - 10407997
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||| ||||||||||||| || |||||||||||||||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 10407988  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  10407989 taaaatttc 10407997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 10408315 - 10408207
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  10408315 ggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10408216  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  10408215 taaaatttc 10408207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 45463075 - 45463181
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||| ||||||||| || |||||||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 45463174  T
Q  355 aaatttc 361  Q
    |||||||    
T  45463175 aaatttc 45463181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 27068909 - 27069018
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||| ||||||||| || ||||||||||||||    
T  27068909 aggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 27069008  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  27069009 ttaaaatttc 27069018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 39701332 - 39701227
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||  ||||||||||||||| ||||||||||||||||||    
T  39701332 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatcatttaa 39701233  T
Q  356 aatttc 361  Q
    ||||||    
T  39701232 aatttc 39701227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 52573656 - 52573548
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||  ||||||||| || |||||||||||||    
T  52573656 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatca 52573557  T
Q  351 tttaaaatt 359  Q
    |||||||||    
T  52573556 tttaaaatt 52573548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 22987279 - 22987169
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||| |||||||| |||| || | |||||||||||    
T  22987279 aaggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatca 22987180  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  22987179 tttaaaatttc 22987169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 27149423 - 27149314
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| || ||| ||| ||||||||| || |||||||||||||    
T  27149423 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcattt-aaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 27149325  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  27149324 tttaaaatttc 27149314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 27891583 - 27891692
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||| | | |||||||||||||||| ||||||||| |||| || ||||||||| || ||||||||||||||    
T  27891583 aggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcat 27891682  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  27891683 ttaaaatttc 27891692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 52573227 - 52573336
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||| ||| ||||||||  || ||||||||||||||    
T  52573227 aggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgtttaatcat 52573326  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  52573327 ttaaaatttc 52573336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 22717937 - 22718047
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||| |||||||| |||| || | |||||||||||    
T  22717937 aaggtttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatca 22718036  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  22718037 tttaaaatttc 22718047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 5818198 - 5818093
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| || ||||||||||||||||||    
T  5818198 ttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaa 5818099  T
Q  356 aatttc 361  Q
    ||||||    
T  5818098 aatttc 5818093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 11523952 - 11524057
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||  ||| ||| |||| |||| || ||||||||||||||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaa 11524051  T
Q  356 aatttc 361  Q
    ||||||    
T  11524052 aatttc 11524057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 16605601 - 16605710
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||  ||| ||||||||| || ||||| ||||||||    
T  16605601 aggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcat 16605700  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  16605701 ttaaaatttc 16605710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 44137541 - 44137658
Alignment:
Q  17 aaatagtttatgcttttgtcaaaagtttctcaaacatatattctttttataggaccaaagatttaattgaaaaacttttgacaaagacagtgattacttt 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| || |||||||||||| ||    ||||||||||||| | || ||||||    
T  44137541 aaatagtttatgcctttgtcaaaagtttctcaaacatatattcttttcatagaacgaaagatttaattaaattttttttgacaaagaccgagactacttt 44137640  T
Q  117 aaaatattaacaaagtca 134  Q
    |||| |||||||||||||    
T  44137641 aaaacattaacaaagtca 44137658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 50504252 - 50504143
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||||  ||| | | ||||||||| || ||||||||||||||    
T  50504252 aggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcat 50504153  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  50504152 ttaaaatttc 50504143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 45463496 - 45463392
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||| |||| |||| || ||||||||||||||||||    
T  45463496 ttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcatttaa 45463397  T
Q  356 aattt 360  Q
    |||||    
T  45463396 aattt 45463392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 44137658 - 44137737
Alignment:
Q  163 acattaatcaatttgatggttcactcgacaattaattgttgtgtggggtattttggtacgagggaacaattcttgaagtt 242  Q
    ||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44137658 acattaaccaatttgatggtttactccgcaattaattgttgtgtggggtattttggtacgagggaacaattcttgaagtt 44137737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 51859833 - 51859724
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||  ||||||||| ||| ||| ||||||| | ||  |||||||||||||    
T  51859833 aggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaatcat 51859734  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  51859733 ttaaaatttc 51859724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 50503823 - 50503931
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||| ||||| ||||||||  |||  |  ||||||||| || |||||||||||||    
T  50503823 aaggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatca 50503922  T
Q  351 tttaaaatt 359  Q
    |||||||||    
T  50503923 tttaaaatt 50503931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 14801734 - 14801844
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||  ||||||||| ||| ||||||||||||| ||  ||||||||||||    
T  14801734 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatca 14801833  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  14801834 tttaaaatttc 14801844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 24711109 - 24711219
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || |||||||||||||    
T  24711109 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatca 24711208  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  24711209 tttaaaatttc 24711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 22923149 - 22923246
Alignment:
Q  264 gtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||  |||||| |||||||||||||||||||  ||||||||  ||| ||||||||||||  || ||||||||||||||||||||||||    
T  22923149 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22923246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 22927802 - 22927899
Alignment:
Q  264 gtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||  |||||| |||||||||||||||||||  ||||||||  ||| ||||||||||||  || ||||||||||||||||||||||||    
T  22927802 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22927899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 22984081 - 22984178
Alignment:
Q  264 gtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||  |||||| |||||||||||||||||||  ||||||||  ||| ||||||||||||  || ||||||||||||||||||||||||    
T  22984081 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22984178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 22997669 - 22997766
Alignment:
Q  264 gtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||  |||||| |||||||||||||||||||  ||||||||  ||| ||||||||||||  || ||||||||||||||||||||||||    
T  22997669 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 22997766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 34765789 - 34765700
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| || | ||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  34765789 tccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttc 34765700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 37248256 - 37248344
Alignment:
Q  273 ccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  37248256 ccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 37248344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 15508091 - 15507993
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||||||||||||| || ||| ||||||||||||||||||||    
T  15508091 atgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatttc 15507993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 35508646 - 35508560
Alignment:
Q  275 ttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||| ||| ||||||||||| ||| ||||||||  |||||| |||||||||| || ||||||||||||||||||||||||    
T  35508646 ttgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatcatttaaaatttc 35508560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 361
Target Start/End: Original strand, 39700919 - 39701017
Alignment:
Q  263 tgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||| | ||||||||||||||| |||||||||||| ||| ||||||||| ||| |||||||| |||| || |||| |||||| ||||||||||||    
T  39700919 tgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaatatacccttacattatttaattatttaaaatttc 39701017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 37976582 - 37976473
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| || | ||||||||| ||| ||||||||||  ||| ||||||||| ||||||||||||||| | || ||||||||||||||    
T  37976582 aggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatcat 37976483  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  37976482 ttaaaatttc 37976473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 39667199 - 39667094
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||| ||||| | |||||||||||||| |||| ||||||||  ||| |||  || ||||| || ||||||||||||||||||    
T  39667199 ttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaa 39667100  T
Q  356 aatttc 361  Q
    ||||||    
T  39667099 aatttc 39667094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 357
Target Start/End: Complemental strand, 50751926 - 50751822
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||  || |||||||||||||| |||||||||| |||| ||||||||| ||| ||||||| ||| | || ||||||||||||||    
T  50751926 aggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcat 50751828  T
Q  352 ttaaaa 357  Q
    ||||||    
T  50751827 ttaaaa 50751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 52909262 - 52909361
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| || ||||||||||| ||| || ||||||| |||  ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  52909262 atgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 52909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 18831347 - 18831457
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  ||||| |||||||| ||| |||||||||| |||| ||||||||| ||| |||  |||||||| || |||||||||||||    
T  18831347 aaggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatca 18831446  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  18831447 tttaaaatttc 18831457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 23613307 - 23613417
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| ||||||||| |||  || |||||||||  | |||||||||||||    
T  23613307 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatca 23613406  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  23613407 tttaaaatttc 23613417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 5368945 - 5369054
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  ||||||||||||||  || |||||||||| |||| ||||||||| ||| ||| |||||||||  | |||||||||||||    
T  5368945 aaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatca 5369044  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  5369045 tttaaaattt 5369054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 7451853 - 7451942
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||  ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  7451853 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 7451942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 361
Target Start/End: Complemental strand, 22718354 - 22718257
Alignment:
Q  264 gtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||  ||||||||||||||||||||||| ||  |||||| |  ||| ||| ||||||||  || ||||||||||||||||||||||||    
T  22718354 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 22718257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 361
Target Start/End: Original strand, 22986862 - 22986959
Alignment:
Q  264 gtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||  ||||||||||||||||||||||| ||  |||||| |  ||| ||| ||||||||  || ||||||||||||||||||||||||    
T  22986862 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttc 22986959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 44967447 - 44967358
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||  ||| |||||||||| |||| ||||||||| ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  44967447 tccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 44967358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 49879585 - 49879496
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||| |  ||  ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  49879585 tccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 49879496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 50419046 - 50418957
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| | ||||||| ||| ||| |||| |||| || ||||||||||||||||||||||||    
T  50419046 tccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcatttaaaatttc 50418957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 51692552 - 51692661
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||  ||| ||||||||||  ||  ||||||||| ||| ||||||||||||| || |||||||||||||     
T  51692552 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcac 51692651  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  51692652 ttaaaatttc 51692661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 9400519 - 9400626
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcat 351  Q
    |||||||| ||||| || ||||||||||||||| |||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| ||||||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatcat 9400617  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  9400618 ttaaaattt 9400626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 27934530 - 27934640
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatc 349  Q
    |||||||||| ||||| || ||||||||||||||| ||| |||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| ||||||    
T  27934530 aaggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatc 27934628  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  27934629 atttaaaatttc 27934640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 50750896 - 50750991
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaa 357  Q
    |||||||||  || |||||||||||||| |||||||||| |||| ||||||||| ||| ||| ||| ||| | || ||||||||||||||||||||    
T  50750896 atgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaa 50750991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 54087114 - 54087015
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| || ||| ||||||| ||| |||||||||| |||| ||||||||  |||  |||||||||||| || ||||||||||||||||||||||||    
T  54087114 atgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaatttc 54087015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 356
Target Start/End: Original strand, 24411367 - 24411461
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaa 356  Q
    |||| |||| |||| ||||||||| ||  |||||||||| |||| ||||||||| ||  ||||||||||||| || |||||||||||||||||||    
T  24411367 atgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcatttaaa 24411461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 53701826 - 53701920
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||||||||| ||| ||||||||||  ||  ||||||| | ||| ||||||||||| | || ||||||||||||||||||||||||    
T  53701826 tttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcatttaaaatttc 53701920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 13058056 - 13058145
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||| ||| |||  ||||||||  | ||||||||||||||||||||||||    
T  13058056 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttc 13058145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 22567185 - 22567124
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||||    
T  22567185 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaat 22567124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 39666772 - 39666884
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctg------acaatttacctttccattgtttaat 348  Q
    |||||| |||||||||||| ||| ||||||  ||||||||||||||||||  ||||||||| ||| |||      | || |||||||| |||||||||||    
T  39666772 cttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcctggcatttaaaaattacctttgcattgtttaat 39666871  T
Q  349 catttaaaatttc 361  Q
    |||||||||||||    
T  39666872 catttaaaatttc 39666884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 361
Target Start/End: Complemental strand, 9400914 - 9400808
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcattt 353  Q
    |||||| ||||| || ||||||||||||||| ||| |||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| ||||||||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatcattt 9400816  T
Q  354 aaaatttc 361  Q
    ||||||||    
T  9400815 aaaatttc 9400808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 35028429 - 35028318
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||  |||| |||| |||||||||||||| ||  |||||||||| |||| | |  |||| ||| ||  ||||||||| || ||||||||||||    
T  35028429 gaaggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatc 35028330  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  35028329 atttaaaatttc 35028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 11448159 - 11448049
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||||||| || ||||||| ||| ||||||||||  ||  ||||||||| ||| ||  ||| ||||| || |||||||||||||    
T  11448159 aaggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatca 11448060  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  11448059 tttaaaatttc 11448049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 361
Target Start/End: Original strand, 16005864 - 16005946
Alignment:
Q  279 aattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||| ||| ||||||||||| ||| ||||||||| ||||||| ||||||| |  |  |||||||||||||||||||||||    
T  16005864 aattaggggtcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaaatttc 16005946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 39051322 - 39051388
Alignment:
Q  80 taattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtca-aactaatttaa 145  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||| | ||||| |||||||||||    
T  39051322 taattgagaaacttttgacaaagacagtgactattttaaaatattaatagagtcataactaatttaa 39051388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 4982726 - 4982833
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcat 351  Q
    |||||||| ||||| || |||||||||||||| ||| ||||||||||| |||| |||||| || |||  || ||||||| |||| | |||| ||||||||    
T  4982726 ggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattg-ttaatcat 4982824  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  4982825 ttaaaattt 4982833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 4983123 - 4983015
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| ||||| || ||||||||||||||||||| ||||||||||  ||| |||||| || ||| ||  ||||||| | || || |  |||||||||    
T  4983123 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcatt 4983024  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  4983023 taaaatttc 4983015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 42738430 - 42738320
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatc 349  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| ||||||    
T  42738430 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatc 42738332  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  42738331 atttaaaatttc 42738320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 55264487 - 55264436
Alignment:
Q  75 agatttaattgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    ||||||||||||||||||||||||||||||| ||| || ||| |||||||||    
T  55264487 agatttaattgaaaaacttttgacaaagacaatgactattttgaaatattaa 55264436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 360
Target Start/End: Complemental strand, 6237223 - 6237141
Alignment:
Q  278 caattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    |||||||||||||||||||| ||||||  |||||| || ||| |||| |||||||| || || |  |||||||||||||||||    
T  6237223 caattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttacccttacaattgttaatcatttaaaattt 6237141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 27934906 - 27934856
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||| || |||||||||||||||||||||||||||||| |||| ||||||    
T  27934906 atgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaat 27934856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 9731595 - 9731530
Alignment:
Q  296 aaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||| | ||||||||| ||| ||||||||||| | ||  |||||||||||||||||||||||    
T  9731595 aaattagttcctgtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttc 9731530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 355
Target Start/End: Complemental strand, 29321324 - 29321231
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    |||||||||||||||||||||| | |||||||||||||| ||   | ||||||  ||||||| ||| |||||||| ||   |||||||||||||    
T  29321324 atgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattaccttttcaaattttaatcatttaa 29321231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 356
Target Start/End: Original strand, 33247293 - 33247377
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcatttaaa 356  Q
    |||||||||||||| |||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||||||||    
T  33247293 tccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatcatttaaa 33247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 34837072 - 34837133
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  34837072 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 34837133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 39539347 - 39539238
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||| | ||| |||||||||| |||  ||||||||  ||||||  ||| ||| | || |||| |||||||||    
T  39539347 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcat 39539248  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  39539247 ttaaaatttc 39539238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 55867519 - 55867434
Alignment:
Q  276 tgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| ||| |||||||||| |||| ||||||||  ||| ||  |||  |||| || ||||||||||||||||||||||||    
T  55867519 tgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcatttaaaatttc 55867434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 10203628 - 10203728
Alignment:
Q  260 taatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatt 359  Q
    ||||||||||||||| |  ||||| | ||||||||||||||||||  ||||||||  ||||||||||| ||| | ||  |   |||||||||||||||||    
T  10203628 taatgtgtttcgtccctataattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatccttataaaatttaatcatttaaaatt 10203727  T
Q  360 t 360  Q
    |    
T  10203728 t 10203728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 30641529 - 30641626
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| | |||||||| |||||||||||||| |||  ||||||||  ||| ||  ||| ||||| || ||  ||||||||||||||||||||    
T  30641529 atgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaattaccattacaaagtttaatcatttaaaatttc 30641626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 40942664 - 40942620
Alignment:
Q  82 attgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    |||||||||||||||||||||||| ||| || |||||||||||||    
T  40942664 attgaaaaacttttgacaaagacaatgactagtttaaaatattaa 40942620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 42738030 - 42738090
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  42738030 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 42738090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 51203608 - 51203668
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  51203608 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 51203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 7403254 - 7403309
Alignment:
Q  80 taattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtcaa 135  Q
    ||||||| |||||||| || |||||||||||||  |||||||||||| ||||||||    
T  7403254 taattgagaaacttttaaccaagacagtgattatattaaaatattaataaagtcaa 7403309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 360
Target Start/End: Original strand, 9144775 - 9144873
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatcatttaaaattt 360  Q
    |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| |||||||||||||||||    
T  9144775 atgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatcatttaaaattt 9144873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 9145165 - 9145055
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatc 349  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||  |||| |||||| || ||| ||| || ||| ||| | | |||| ||||||    
T  9145165 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatc 9145067  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  9145066 atttaaaatttc 9145055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 11446279 - 11446378
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| |||||||||  |||||||||||||| || | || |||||  ||| ||| ||| ||||| || ||  |||||||| |||||||||||    
T  11446279 atgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatcttttaaaatttc 11446378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 17356341 - 17356242
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| ||||| |||||| | ||| |||||||||| |||| |||| |||| |||  || ||||||||  || |||||||| |||||||||||||||    
T  17356341 atgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcatttaaaatttc 17356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 32950140 - 32950250
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatc 349  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| ||||  ||||| || ||| ||| || ||| ||| | | |||| ||||||    
T  32950140 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcattttaaccctgcaattg-ttaatc 32950238  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  32950239 atttaaaatttc 32950250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 38012567 - 38012508
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  38012567 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 38012508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 22566798 - 22566907
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||||| ||| || ||||||| |||||||  || |||||||||| || | |||||| || ||| ||| ||||||| |||| | |||| |||||||    
T  22566798 aggcttaataaagtgattagtccttgtaattagggatcgtttaaaaattcgttcctgtaattgctaatcctggcaatttagccttgcaattg-ttaatca 22566896  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  22566897 tttaaaatttc 22566907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 33247667 - 33247562
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcattta 354  Q
    ||||| ||||| || |||||||||||||||  || |||||||||  |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||||||    
T  33247667 ttaatgatgtgattagtccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatcattta 33247569  T
Q  355 aaatttc 361  Q
    |||||||    
T  33247568 aaatttc 33247562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 36009203 - 36009133
Alignment:
Q  291 tttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| |||| ||||||||  ||| |||  ||||||||  | ||||||||||||||||||||||||    
T  36009203 tttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcatttaaaatttc 36009133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 43155898 - 43155816
Alignment:
Q  279 aattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||| ||| |||||||||| |||| ||||||||  ||| ||| ||||||| |  | |||| |||||||||||||||||||    
T  43155898 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttc 43155816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 53129936 - 53129826
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||| ||| ||| ||||||||||  |||  |||||||| ||| ||  ||||||||| |  |||||||| |||     
T  53129936 aaggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcg 53129837  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  53129836 tttaaaatttc 53129826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 32063755 - 32063658
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatt 359  Q
    |||| ||| |||| |||||||||| |||||||||||||| ||   ||||||||  ||| ||| ||| ||||| || ||  ||||||||||||||||||    
T  32063755 atgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcatttaaaatt 32063658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 25500460 - 25500500
Alignment:
Q  80 taattgaaaaacttttgacaaagacagtgattactttaaaa 120  Q
    |||||||||||||||||||||| ||| |||||| |||||||    
T  25500460 taattgaaaaacttttgacaaaaacaatgattaatttaaaa 25500500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 32950540 - 32950480
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||| | |||||||||||| |||| ||||||    
T  32950540 aggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaat 32950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 34837472 - 34837424
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 300  Q
    ||||||| | |||||||| | ||||||||||||||| ||||||||||||    
T  34837472 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatt 34837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 45122541 - 45122608
Alignment:
Q  80 taattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtca--aactaatttaa 145  Q
    |||||||||||| ||| |||||||||   |||| ||||||||||||| |||||||  |||||||||||    
T  45122541 taattgaaaaacatttcacaaagacataaattattttaaaatattaataaagtcaacaactaatttaa 45122608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 8710896 - 8710786
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| || |||||||||||||    
T  8710896 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 8710797  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  8710796 tttaaaatttc 8710786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 28226170 - 28226062
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 28226071  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  28226070 taaaatttc 28226062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 41588483 - 41588376
Alignment:
Q  254 gcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattt 353  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||  || ||||||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcattt 41588384  T
Q  354 aaaatttc 361  Q
    ||||||||    
T  41588383 aaaatttc 41588376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 15604337 - 15604447
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| ||| ||||||||| || |||||||||||||    
T  15604337 aaggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 15604436  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  15604437 tttaaaatttc 15604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 11830365 - 11830472
Alignment:
Q  254 gcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattt 353  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||| || |||||||||| || ||||||||||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcattt 11830464  T
Q  354 aaaatttc 361  Q
    ||||||||    
T  11830465 aaaatttc 11830472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 15604767 - 15604657
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| |||||||| ||||||||||||||| |||||||||||| |||||| ||||||||| ||| ||| ||||||||| || |||||||||||||    
T  15604767 aaggtttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 15604668  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  15604667 tttaaaatttc 15604657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 8342607 - 8342497
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||||   ||| ||||||||||||| || ||||||||||| |    
T  8342607 aaggtttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaatta 8342508  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  8342507 tttaaaatttc 8342497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 6573050 - 6573150
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||  || ||||||||| || ||||||||||||||||||    
T  6573050 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaatttacc-ttgcattgtttaatcatttaa 6573148  T
Q  356 aa 357  Q
    ||    
T  6573149 aa 6573150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 6573542 - 6573647
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||| ||| ||| ||||||||| ||  |||||||||||||    
T  6573542 aggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcat 6573641  T
Q  352 ttaaaa 357  Q
    ||||||    
T  6573642 ttaaaa 6573647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 8342190 - 8342295
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||| |  ||| ||| ||||||| | || ||||||||||||||||||    
T  8342190 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcatttaa 8342289  T
Q  356 aatttc 361  Q
    ||||||    
T  8342290 aatttc 8342295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 41587232 - 41587342
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||| |||| ||||||||  ||| |||  || ||||| || ||||||||||||    
T  41587232 gaaggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtcc-tgtaatcgttaatcctggaaaattacccttgcattgtttaatc 41587330  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  41587331 atttaaaatttc 41587342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 44714175 - 44714081
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||||||||| ||| ||||||||||||||| |||||| || ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  44714175 tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 44714081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 11163432 - 11163343
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||| | ||||||||||||||||||||||||    
T  11163432 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcatttaaaatttc 11163343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 36382160 - 36382269
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| ||||||||||||||  || |||||||||| |||| | ||||||| ||| ||||||||||||| || ||||||||||||||    
T  36382160 aggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcat 36382259  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  36382260 ttaaaatttc 36382269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 25892394 - 25892498
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| ||||||||| ||  || |||||||| ||||||||||||| |||| ||||||||| ||| ||| ||| ||||| ||||||||||||||||||    
T  25892394 ggcttaatgatgtgtttcatctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatt 25892493  T
Q  353 taaaa 357  Q
    |||||    
T  25892494 taaaa 25892498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 15848097 - 15848196
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| |||  |||||||| || ||||||||||||||||||||||||    
T  15848097 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttc 15848196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 34447810 - 34447916
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||  |||| |||| |||||| ||||||| |||||||||||||| |||| | ||||||| ||| ||||||||||||| || |||||||||||     
T  34447810 gaaggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaata 34447909  T
Q  350 atttaaa 356  Q
    |||||||    
T  34447910 atttaaa 34447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 2318168 - 2318266
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||  |||||||||| |||  ||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||    
T  2318168 atgtatttcatccttgcaattagg-gtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 2318266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 6589778 - 6589679
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| |||||||| | |||||||||||||| |||| ||||||||  ||||||| ||| ||||| || ||  ||||||||||||||||||||    
T  6589778 atgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaatttc 6589679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 16099076 - 16099163
Alignment:
Q  274 cttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||| |||||||||||||| |||| ||||||| | ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  16099076 cttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 16099163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 39498329 - 39498418
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||| ||||||| ||| |||||||||| |||| ||||||||  ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  39498329 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttc 39498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 45556110 - 45556219
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  ||||||||||||||  || |||||||||| |||| ||||||||| ||| ||| ||||||| |  | |||||||||||||    
T  45556110 aaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatca 45556209  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  45556210 tttaaaattt 45556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 22051421 - 22051313
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| | |||||||||||  ||  ||||||||||||||  ||||||||| ||| ||  ||||||||| || |||||||||||||||    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatt 22051322  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  22051321 taaaatttc 22051313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 10712732 - 10712831
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| ||||||||||||||  || |||||||||| |||| | |||||   ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  10712732 atgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10712831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 36479740 - 36479826
Alignment:
Q  275 ttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||| ||| |||||||||| |||| ||||||||| |||  |  || |||||| || ||||||||||||||||||||||||    
T  36479740 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcatttaaaatttc 36479826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 39423529 - 39423623
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||| ||||| | ||| |||||||||| |||  ||||||||| ||||||| ||||||| | ||  |||||||||||||||||||||||    
T  39423529 tttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatttaaaatttc 39423623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 6657897 - 6657986
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||| || ||| |||||||||| |||| ||||||| | |||  || |||||||||  | ||||||||||||||||||||||||    
T  6657897 tccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcatttaaaatttc 6657986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 14900495 - 14900555
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||||| ||||| || |||||||||||||||||||||| ||||||| |||| ||||||    
T  14900495 aggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaat 14900555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 14900880 - 14900800
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta 331  Q
    |||||||||| ||||| || ||||||||||||||| ||| |||||||||| |||| |||||| || ||| ||| |||||||    
T  14900880 aaggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaattta 14900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 28228679 - 28228731
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    ||||||||||||| |||||||||| |||||||||||||| |||| ||||||||    
T  28228679 atgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcg 28228731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 202775 - 202676
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||| |||| || ||||||| |||||||||||||| |||| ||||||||  ||| ||| ||| ||| | || ||  ||||||||||||||||||||    
T  202775 atgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaatttc 202676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 28230158 - 28230059
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| || ||||| | |||||||||||||| |||| ||||||||  ||| ||  ||| ||||| || ||  ||||||||||||||||||||    
T  28230158 atgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaaaatttc 28230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 33739701 - 33739811
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatc 349  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| ||||||    
T  33739701 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatc 33739799  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  33739800 atttaaaatttc 33739811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 37895766 - 37895667
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||| | ||| |||||||| | || |  |||||||| ||| ||| ||||||||  || ||||||||||||||||||||||||    
T  37895766 atgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaaaatttc 37895667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 39936665 - 39936567
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| |||||||||||||  ||| |||||| |||| ||||||||  ||| ||| ||| ||||| || ||  ||||||||||||||||||||    
T  39936665 atgtgtttcgtccctgcaattaggcgtggttt-aaaattggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttc 39936567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 1695738 - 1695847
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatc 349  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| ||||||    
T  1695738 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatc 1695836  T
Q  350 atttaaaattt 360  Q
    |||||||||||    
T  1695837 atttaaaattt 1695847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 36755131 - 36755201
Alignment:
Q  291 tttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| || | ||||| ||| ||| || |||||||||| || ||||||||||||||||||||||||    
T  36755131 tttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcatttaaaatttc 36755201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 6577674 - 6577601
Alignment:
Q  284 ggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaa 357  Q
    ||||||||||||||||| |||| ||||||||| ||| ||| ||| ||||  || ||||||||||| ||||||||    
T  6577674 ggcgtcatttaaaaatttgtccctgtaatcgccaatcctggcaaattactattgcattgtttaattatttaaaa 6577601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 33062048 - 33062109
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  33062048 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 33062109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 33062449 - 33062388
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  33062449 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 33062388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 13995672 - 13995732
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  13995672 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 13995732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 13996071 - 13996011
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  13996071 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 13996011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 6588692 - 6588791
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||| |||| |||| |||| ||| ||  |||  || | || |||| |||||||||||||||||||    
T  6588692 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttc 6588791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 43742095 - 43742000
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaa 357  Q
    |||| |||||||| ||||||| |  |||||||||||||| |||| |||||||   ||| ||||||| ||||| || ||  ||||||||||||||||    
T  43742095 atgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcatttaaaa 43742000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 3555248 - 3555358
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||  |||| |||  | | || |||| ||| | || |||| ||||||||    
T  3555248 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatca 3555347  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  3555348 tttaaaatttc 3555358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 361
Target Start/End: Complemental strand, 3653496 - 3653400
Alignment:
Q  264 gtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||| || ||||| | |||||||||||||| |||| ||||||||  || |||| ||| ||||| || ||  ||||||||||||||||||||    
T  3653496 gtgtgtcgtccctgtaattatgggtcatttaaaaattggtccatgtaatcgttaa-tctggcaaattacccttgcaaagtttaatcatttaaaatttc 3653400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 199030 - 199082
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||||||| |||| ||||||||||  |||||||||||||||| | ||||||||    
T  199030 atgtgtttagtccctgcaattagggatcatttaaaaattagttcctgtaatcg 199082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 25893590 - 25893542
Alignment:
Q  309 taatcgcgaattctgacaatttacctttccattgtttaatcatttaaaa 357  Q
    ||||||| |||  |||||||||||| || ||||||||||||||||||||    
T  25893590 taatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaa 25893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 30729621 - 30729729
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| ||||||||||||| |||| |||||||||| |||| | || |||| ||| ||  ||| || || || |||| ||||||| ||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgtt 30729720  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  30729721 taaaatttc 30729729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 33740101 - 33740041
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | |||| |||||||||| |||||||||||| |||| ||||||    
T  33740101 aggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaat 33740041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 36755518 - 36755454
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| | |||||||    
T  36755518 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgc 36755454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 41248957 - 41248897
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | ||||||||   ||||||||||||||| |||||||||||| |||| ||||||    
T  41248957 aggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaat 41248897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 5e-41; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 40714870 - 40714761
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||| ||||||||||||||    
T  40714870 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcat 40714771  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  40714770 ttaaaatttc 40714761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 31050949 - 31051058
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||| ||| |||||||||||| ||||||||||||||    
T  31050949 aggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcat 31051048  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  31051049 ttaaaatttc 31051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 37929417 - 37929526
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||| || |||| |||||||||    
T  37929417 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacattatttaatcat 37929516  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  37929517 ttaaaatttc 37929526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 40714443 - 40714552
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| || ||||||||||||||    
T  40714443 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 40714542  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  40714543 ttaaaatttc 40714552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 17188954 - 17189062
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| || |||| ||||||||||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatt 17189053  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  17189054 taaaatttc 17189062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 30326496 - 30326604
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||  |||||||| || |||||||||||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatt 30326595  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  30326596 taaaatttc 30326604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 49955347 - 49955454
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  49955347 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 49955446  T
Q  353 taaaattt 360  Q
    ||||||||    
T  49955447 taaaattt 49955454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 8898945 - 8898835
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||| | ||| ||||||||||||| || |||||||||||||    
T  8898945 aaggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaatca 8898846  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  8898845 tttaaaatttc 8898835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 20760932 - 20760823
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||  ||||||||| ||| ||| ||||||||| || ||||||||||||||    
T  20760932 aggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 20760833  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  20760832 ttaaaatttc 20760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 35041037 - 35040932
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| || ||||||||||||||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 35040938  T
Q  356 aatttc 361  Q
    ||||||    
T  35040937 aatttc 35040932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 49955774 - 49955665
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||  ||| ||| ||||||||| || ||||||||||||||    
T  49955774 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 49955675  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  49955674 ttaaaatttc 49955665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 17189277 - 17189173
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  17189277 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 17189178  T
Q  353 taaaa 357  Q
    |||||    
T  17189177 taaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 8898515 - 8898625
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||  |||||||  ||  ||||||||||||    
T  8898515 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatca 8898614  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  8898615 tttaaaatttc 8898625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 45749840 - 45749950
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||  ||||||||  ||| ||||||||||||  || |||||||||||||    
T  45749840 aaggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatca 45749939  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  45749940 tttaaaatttc 45749950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 12906086 - 12905977
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||| | | |||||||||||||||||| ||||||||| ||| ||| ||||||||| || ||||||||||||||    
T  12906086 aggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 12905987  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  12905986 ttaaaatttc 12905977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 45750269 - 45750160
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||  ||||||||  || ||||||||||||||    
T  45750269 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatcat 45750170  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  45750169 ttaaaatttc 45750160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 28325230 - 28325122
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||| | ||||||||  |||| || ||||||||| || ||||||||||||||    
T  28325230 aggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagt-catgtaatcgttaattatggcaatttacccttgcattgtttaatcat 28325132  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  28325131 ttaaaatttc 28325122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 31058486 - 31058375
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||  ||||||||  |||  || ||||||||| || ||||||||||||    
T  31058486 gaaggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatc 31058387  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  31058386 atttaaaatttc 31058375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 28324803 - 28324912
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||| ||||| | ||||||||| ||| ||||||||||||| || |||| ||||||||    
T  28324803 aaggcttaatgatgtgtttcctccttgcaattaggcgtcgtttaaaa-ttagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatca 28324901  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  28324902 tttaaaatttc 28324912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 7820952 - 7821062
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||| ||||||||| ||||||||| ||| || |||||||||| || |||||||||||||    
T  7820952 aaggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatca 7821051  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  7821052 tttaaaatttc 7821062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 6367562 - 6367670
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 6367661  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  6367662 taaaatttc 6367670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 25885421 - 25885357
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25885421 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgc 25885357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 361
Target Start/End: Complemental strand, 44523562 - 44523456
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| |   | ||||||| |||  || ||||||||| || |||||||||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttacccttgcattgtttaatcattta 44523463  T
Q  355 aaatttc 361  Q
    |||||||    
T  44523462 aaatttc 44523456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 32558534 - 32558425
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||| |||||| ||||||| |||||||||||||||||| | | ||||||| ||| |||| |||||||| ||  | |||||||||||    
T  32558534 aggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatcat 32558435  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  32558434 ttaaaatttc 32558425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 36694677 - 36694568
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||  |||||||||| |||  ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  36694677 aggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 36694578  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  36694577 ttaaaatttc 36694568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 36710778 - 36710669
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||  |||||||||| |||  ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  36710778 aggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 36710679  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  36710678 ttaaaatttc 36710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 40772507 - 40772615
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||| | ||| |||||||||| |||| ||||||||| ||| ||||||||||||  || |||||||||||||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatt 40772606  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  40772607 taaaatttc 40772615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 41098732 - 41098840
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| | |||||||||||| ||| |||||||||| |||  ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  41098732 aggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 41098831  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  41098832 ttaaaattt 41098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 46163039 - 46163138
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| || ||| ||||||| ||| |||||||||| |||| ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  46163039 atgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 46163138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 28011767 - 28011658
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatc 349  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| ||||||    
T  28011767 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatc 28011669  T
Q  350 atttaaaattt 360  Q
    |||||||||||    
T  28011668 atttaaaattt 28011658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 7371293 - 7371398
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||   |||||||||  ||||||  |||||| | || ||||||||||| ||||||    
T  7371293 ttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcattgtttaattatttaa 7371392  T
Q  356 aatttc 361  Q
    ||||||    
T  7371393 aatttc 7371398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 23209756 - 23209647
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||| ||||||    
T  23209756 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatcat 23209657  T
Q  352 ttaaaatttc 361  Q
    ||| ||||||    
T  23209656 ttacaatttc 23209647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 35038458 - 35038563
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    |||||||||||||||||||||||||||| | ||||||||||||||  ||| ||||||||  ||| ||  ||| |||| |||  |||||||||||||||||    
T  35038458 ttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaa 35038557  T
Q  356 aatttc 361  Q
    ||||||    
T  35038558 aatttc 35038563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 34464449 - 34464557
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| |||  || ||||||||| || || ||||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464548  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  34464549 taaaatttc 34464557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 35152342 - 35152450
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||  ||| |||||||||| |||| | ||||||| ||| ||| ||||||||| || ||||||||||||||    
T  35152342 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcat 35152441  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  35152442 ttaaaattt 35152450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 40210789 - 40210690
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| || ||||||||||| | | |||||||||| |||  ||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||    
T  40210789 atgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 40210690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 7371598 - 7371528
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaatt 320  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||    
T  7371598 gaaggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaatt 7371528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 24009955 - 24009861
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| ||||||||||||||  || |||||||||| |||  ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  24009955 tttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 24009861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 14878990 - 14879079
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| || | ||||||||| |||  || ||||||||| || ||||||||||||||||||||||||    
T  14878990 tccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 14879079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 19515818 - 19515927
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||  ||||||||  |||||||  |||||||| || ||||||||||| ||    
T  19515818 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaattat 19515917  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  19515918 ttaaaatttc 19515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 24905166 - 24905274
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || ||| ||  ||||||| |||| | |||| |||||||    
T  24905166 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattg-ttaatca 24905264  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  24905265 tttaaaattt 24905274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 32917279 - 32917368
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||||  || |||||||||| |||| ||||||||| ||| |||||| |||||  || ||||||||||||||||||||||||    
T  32917279 tccttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttc 32917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 34464878 - 34464770
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||  |||||||||| |||| ||||||||| |||  || ||||||||| || || |||||||||||    
T  34464878 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcat 34464779  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  34464778 ttaaaattt 34464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 13914486 - 13914387
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||  ||  |||||||||| |||| ||||||||| ||| ||| ||||||||| ||  |||||||||||||||||||||||    
T  13914486 atgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcatttaaaatttc 13914387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 357
Target Start/End: Original strand, 26024444 - 26024527
Alignment:
Q  274 cttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaa 357  Q
    |||||||||||| ||| |||||||||| |||  ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||    
T  26024444 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaa 26024527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 37578623 - 37578512
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||  |||| |||| ||||||||||| || ||| |||||||||| ||   ||||||||| ||| ||| ||||||||| || ||||| ||||||    
T  37578623 gaaggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatc 37578524  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  37578523 atttaaaatttc 37578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 1841481 - 1841567
Alignment:
Q  275 ttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||| | ||| |||||||||| |||   |||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  1841481 ttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatcatttaaaatttc 1841567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 17662280 - 17662170
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| ||||||||||| || ||| |||||||||| || | | ||||||  ||| ||| ||||||||| || |||||||||||||    
T  17662280 aaggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatca 17662181  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  17662180 tttaaaatttc 17662170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 25647882 - 25647992
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| ||||||||  ||| ||| |||||||||  | |||| ||||||||    
T  25647882 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatca 25647981  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  25647982 tttaaaatttc 25647992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 17692604 - 17692505
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||  |||| ||| ||||| ||| ||  ||| ||| |||| ||||||||||||||||||||||||    
T  17692604 atgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaaaatttc 17692505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 42248482 - 42248581
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||  ||| |||||||||| |||  |||| |||| |||  || ||||||||| || ||||||||||||||||||||||||    
T  42248482 atgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcatttaaaatttc 42248581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 1103468 - 1103569
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaat--tagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatt 359  Q
    |||| |||| || ||||||||||  ||| |||||||||  | |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||    
T  1103468 atgtatttcatctttgcaattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatt 1103567  T
Q  360 tc 361  Q
    ||    
T  1103568 tc 1103569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 43758876 - 43758930
Alignment:
Q  307 tgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||| ||||||||||||||||  || ||||||||||||||||||||||||    
T  43758876 tgtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttc 43758930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 5734009 - 5734116
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| ||||||||||||||||||| ||| |||||||||| || | ||||||||| ||| ||  ||| |||   || ||||||||||||||    
T  5734009 aggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggt-catgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 5734107  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  5734108 ttaaaattt 5734116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 19018038 - 19017950
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||||||||||   ||| |||||||||| |||| |||| |||| ||| ||| ||||||||| || |||| ||||||||||||||||||    
T  19018038 tccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcatttaaaattt 19017950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 4960549 - 4960648
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| || ||||||||||| ||| ||||||||||  ||  |||| |||| ||| ||  ||||||||| || ||||||||||||||||||||||||    
T  4960549 atgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttc 4960648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 17691228 - 17691327
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||||| ||| |||| ||| |||||||||| |||| ||||||||| ||| ||  ||| |||   || ||||||||||||||||||||||||    
T  17691228 atgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttc 17691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 47999501 - 47999415
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaat 358  Q
    |||||| ||||||| ||| |||||||||| |||| ||||||||| |||  || |||||||||  | |||| ||||||||||||||||    
T  47999501 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcatttaaaat 47999415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 25884700 - 25884745
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaa 297  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||||    
T  25884700 aggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaa 25884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 6219710 - 6219602
Alignment:
Q  80 taattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtc--aaactaatttaagaatcacacttacagagacattaatcaatttg 177  Q
    ||||||| ||| |||||||||||||||||| || ||||||||||||| ||| ||  | |||| |||||||||   ||||| | |||||  ||||||||||    
T  6219710 taattgagaaatttttgacaaagacagtgactaatttaaaatattaataaaatcatagactagtttaagaat--gacttataaagacaaaaatcaatttg 6219613  T
Q  178 atggttcactc 188  Q
    |||||| ||||    
T  6219612 atggtttactc 6219602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 15395423 - 15395498
Alignment:
Q  80 taattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtcaa--actaatttaagaatcaca 153  Q
    |||||||||||||||||||||| ||||| | || ||||||||||||| |||  |||  |||||||| |||||||||    
T  15395423 taattgaaaaacttttgacaaaaacagtaactattttaaaatattaataaatacaatgactaatttgagaatcaca 15395498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 30711327 - 30711435
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| ||  ||||||||||  ||  | ||||||| ||| ||  ||||||| | || |||||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatt 30711426  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  30711427 taaaatttc 30711435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 33442982 - 33442883
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatcatttaaaattt 360  Q
    |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| |||||||||||||||||    
T  33442982 atgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatcatttaaaattt 33442884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 7790364 - 7790298
Alignment:
Q  81 aattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtc--aaactaatttaa 145  Q
    |||| ||||||||||||||||||||   |||| ||||||||||||| ||||||  ||||||||||||    
T  7790364 aattaaaaaacttttgacaaagacaaaaattaatttaaaatattaataaagtcagaaactaatttaa 7790298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 10304274 - 10304175
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||| |||| ||||| |||| |||||||||||| | |||  |||| |||  ||||||| |||||| |||| |||   |||||||||||||||||||    
T  10304274 atgtgtttagtccctgcaaataggggtcatttaaaaaatggtcaatgtattcgttaattctggcaatttgccttcccaaaatttaatcatttaaaatttc 10304175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 52134465 - 52134406
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  52134465 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 52134406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 183581 - 183511
Alignment:
Q  291 tttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| |||| ||||||||| ||| ||  |||||||||  | |||| |||||||||||||||||||    
T  183581 tttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcatttaaaatttc 183511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 44522146 - 44522208
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    ||||||||  ||||||||||||| ||||||||||  ||||||||||||| | || ||||||||    
T  44522146 aggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcg 44522208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 4716477 - 4716546
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta 331  Q
    |||||||| | ||||||||||||| | |||||||||||| |||| |||||| || ||| |||||| ||||    
T  4716477 atgtgtttagcccttgcaattaggtggcatttaaaaattcgtccatgtaattgctaatcctgacatttta 4716546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 34849030 - 34849119
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| |||| |||| ||| ||  ||| ||||| || ||   |||||||||||||||||||    
T  34849030 tccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttc 34849119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 34850474 - 34850385
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| |||| |||| ||| ||  ||| ||||| || ||   |||||||||||||||||||    
T  34850474 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttc 34850385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 13914082 - 13914130
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||| |||||||||||||| ||| ||||||||||||||| |||| ||||    
T  13914082 tttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgc 13914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 32132313 - 32132365
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    ||||||||||||| | |||||||  |||||||||||||| |||| ||||||||    
T  32132313 atgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcg 32132365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 42533033 - 42533081
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgta 310  Q
    |||| |||| |||||||||||||| ||| ||||||||||||||| ||||    
T  42533033 atgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgta 42533081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 46899061 - 46899169
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| |||| |||| ||||||  |||  || |||| || |  |||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcatt 46899160  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  46899161 taaaatttc 46899169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 52134067 - 52134127
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | |||||||||||||||  ||||||||||| |||| ||||||    
T  52134067 aggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaat 52134127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 222216 - 222107
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  222216 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 222117  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  222116 ttaaaatttc 222107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 221794 - 221898
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  221794 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagt-cttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 221892  T
Q  356 aatttc 361  Q
    ||||||    
T  221893 aatttc 221898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 7983427 - 7983536
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| || ||||||||||||||    
T  7983427 aggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 7983526  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  7983527 ttaaaatttc 7983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 35634526 - 35634417
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  35634526 aggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 35634427  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  35634426 ttaaaatttc 35634417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 255 - 361
Target Start/End: Complemental strand, 44664932 - 44664826
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||||| || |||||||||||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 44664833  T
Q  355 aaatttc 361  Q
    |||||||    
T  44664832 aaatttc 44664826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 25124989 - 25124881
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||| ||||||||| || |||||||||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 25124890  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  25124889 taaaatttc 25124881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 15230359 - 15230249
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| |||  |||||||||||| || |||||||||||||    
T  15230359 aaggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatca 15230260  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  15230259 tttaaaatttc 15230249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 10445758 - 10445653
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  10445758 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 10445659  T
Q  356 aatttc 361  Q
    ||||||    
T  10445658 aatttc 10445653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 255 - 359
Target Start/End: Complemental strand, 8998113 - 8998009
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||  |||||||||||| || |||||||||||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcattta 8998014  T
Q  355 aaatt 359  Q
    |||||    
T  8998013 aaatt 8998009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 15229931 - 15230039
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| ||  ||||||||||||||    
T  15229931 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatcatt 15230030  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  15230031 taaaatttc 15230039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 44664508 - 44664616
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||| | || |||||||||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatt 44664607  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  44664608 taaaatttc 44664616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 25124560 - 25124671
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| || ||||||||||||    
T  25124560 gaaggtttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatc 25124659  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  25124660 atttaaaatttc 25124671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 37542222 - 37542332
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| | ||||||| ||| ||| ||||||||| || |||||||||||||    
T  37542222 aaggtttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatca 37542321  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  37542322 tttaaaatttc 37542332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 42945542 - 42945432
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||  || |||||||||||||    
T  42945542 aaggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatca 42945443  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  42945442 tttaaaatttc 42945432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 234167 - 234058
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |  ||| ||| ||||||||| || ||||||||||||||    
T  234167 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 234068  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  234067 ttaaaatttc 234058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 710578 - 710469
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |  ||| ||| ||||||||| || ||||||||||||||    
T  710578 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 710479  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  710478 ttaaaatttc 710469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 747790 - 747681
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |  ||| ||| ||||||||| || ||||||||||||||    
T  747790 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 747691  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  747690 ttaaaatttc 747681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 871685 - 871576
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |  ||| ||| ||||||||| || ||||||||||||||    
T  871685 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 871586  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  871585 ttaaaatttc 871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 21432695 - 21432801
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||  ||||||| | |||| |||||||||||| || |||||||||||||||||    
T  21432695 cttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaattttgacaatttacccttgcattgtttaatcattta 21432794  T
Q  355 aaatttc 361  Q
    |||||||    
T  21432795 aaatttc 21432801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 41354001 - 41353891
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||| | ||| ||||||||||||| |  |||| ||||||||    
T  41354001 aaggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccctagcattatttaatca 41353902  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  41353901 tttaaaatttc 41353891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 6471693 - 6471798
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||  | ||||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  6471693 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 6471792  T
Q  356 aatttc 361  Q
    ||||||    
T  6471793 aatttc 6471798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 37542648 - 37542543
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| || | ||| ||||  |||||||| |||||||| || ||||||||||||||||||    
T  37542648 ttaataatgtgtttcatccttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcatttaa 37542549  T
Q  356 aatttc 361  Q
    ||||||    
T  37542548 aatttc 37542543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 41353577 - 41353682
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||||   ||||||||| ||| || |||||||||| || ||||||||||||||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcatttaa 41353676  T
Q  356 aatttc 361  Q
    ||||||    
T  41353677 aatttc 41353682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 39071676 - 39071784
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||||||||||||| || |||||||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  39071776 taaaatttc 39071784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 8997859 - 8997946
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgt 343  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| ||||||||||||| || ||||||    
T  8997859 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttacccttgcattgt 8997946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 4995086 - 4994977
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| |||||||||||||| |||| ||||||||| ||| ||||||||||||| || |||||||||||||    
T  4995086 aaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcc-tgtaatcgctaatcctgacaatttacccttgcattgtttaatca 4994988  T
Q  351 tttaaaatttc 361  Q
    ||| |||||||    
T  4994987 tttcaaatttc 4994977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 40318394 - 40318284
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| ||  ||||||||||||||| ||||||||| ||| ||| ||||||||| || |||||||||||||    
T  40318394 aaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatca 40318295  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  40318294 tttaaaatttc 40318284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 13186058 - 13186168
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| ||||||||||||||  || |||||||||| || | ||||||||| ||| ||||||||||||| || |||||||||||||    
T  13186058 aaggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 13186157  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  13186158 tttaaaatttc 13186168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 8316997 - 8316908
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  8316997 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 8316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 27500092 - 27500197
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| || |||||||||||||||||||  |||||||||||||||||||| || |||||| ||||||||||| ||||   | |||||||||||||| |||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaattctgacaaattactcatgcattgtttaatcatataa 27500191  T
Q  356 aatttc 361  Q
    ||||||    
T  27500192 aatttc 27500197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 16388954 - 16388846
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| |||||||||||||| || | |||||| || ||| ||| ||||||||| || |||||||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 16388855  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  16388854 taaaatttc 16388846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 11675092 - 11674984
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||    
T  11675092 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatca 11674994  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  11674993 tttaaaattt 11674984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 23663923 - 23663834
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  23663923 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 23663834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 23698653 - 23698564
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||| ||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  23698653 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 23698564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 23505051 - 23505159
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || |||  || ||||||||| || || |  ||||||||    
T  23505051 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcat 23505150  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  23505151 ttaaaattt 23505159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 38003834 - 38003752
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacc 333  Q
    |||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||  ||||||||| ||| ||| |||||||||    
T  38003834 aaggtttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcctggcaatttacc 38003752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 6472078 - 6472009
Alignment:
Q  291 tttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||||||||||| | ||||||||| ||| ||||||||||||| || |||||||||||||||||||||||    
T  6472078 tttaaaaattagttcatgtaatcgccaatcctgacaatttacccttgcattgtttaatcatttaaaattt 6472009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 12273262 - 12273173
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||  ||| | | ||||||||| || ||||||||||||||||||||||||    
T  12273262 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaaaatttc 12273173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 36928495 - 36928584
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||| |||||| | ||| |||||||||| |||  ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  36928495 tcctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 36928584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 23507854 - 23507746
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||  |||| |||||| || ||| ||  ||||||||| || || |  ||||||||    
T  23507854 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcat 23507755  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  23507754 ttaaaattt 23507746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 2535969 - 2535870
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||| |||||||||| |||||||||||||| |||| ||||||||  ||| ||| ||| ||||| || ||  ||||||||||||||||||||    
T  2535969 atgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaatttc 2535870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 299
Target Start/End: Complemental strand, 6472441 - 6472395
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaat 299  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  6472441 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 11674694 - 11674803
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || ||||||||||||||||||| |||||||||| |||| |||||| |  ||| ||| ||||||| |||| | |||| |||||||    
T  11674694 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattg-ttaatca 11674792  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  11674793 tttaaaatttc 11674803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 36186493 - 36186387
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||| | ||| ||||||| || |||  | ||||||| ||| |||||||||||||||| ||||||||||||||    
T  36186493 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa-ttggtc--tataatcgctaatcctgacaatttacctttgcattgtttaatcat 36186397  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  36186396 ttaaaatttc 36186387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 22915788 - 22915680
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  ||||||||| ||||  || |||||||||| |||| ||||||||| |||  || ||||||||| || |||||||||||||    
T  22915788 aaggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatca 22915689  T
Q  351 tttaaaatt 359  Q
    |||||||||    
T  22915688 tttaaaatt 22915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 38003487 - 38003563
Alignment:
Q  285 gcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||||||||   ||||||||| |||| |||||||||| | ||  |||||||||||||||||||||||    
T  38003487 gcgtcatttaaaaattagtttctgtaatcgctaattatgacaatttaaccttgtattgtttaatcatttaaaatttc 38003563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 39474579 - 39474654
Alignment:
Q  286 cgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||||| | | ||||||||| |||  || ||||||||| || ||||||||||||||||||||||||    
T  39474579 cgtcatttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 39474654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 31608927 - 31608833
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||||||| | ||| |||||||||| |||| |||| |||| ||| ||  ||||||||| || |||||| |||||||||||||||||    
T  31608927 tttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcatttaaaatttc 31608833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 36325633 - 36325524
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatc 349  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||| |||  |||||| |  ||| ||| ||||||| |||| | |||| ||||||    
T  36325633 aaggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattg-ttaatc 36325535  T
Q  350 atttaaaattt 360  Q
    |||||||||||    
T  36325534 atttaaaattt 36325524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 10749927 - 10749875
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    ||||||||||||||||||||||||  ||||||||||||| |||| ||||||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcg 10749875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 38862618 - 38862726
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||| | | | ||||||| ||  | | ||||||||| ||| |||  ||||||||||| |||||||||||||||    
T  38862618 ggcttaaatatgtatttcatccttgcaattaagggccgtttaaaatttttttcatgtaatcgctaatactggtaatttacctttgcattgtttaatcatt 38862717  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  38862718 taaaatttc 38862726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 42803646 - 42803542
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||  ||| |||||||||| |||| | ||||| | |||  || ||||||||| || |||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatcatt 42803547  T
Q  353 taaaa 357  Q
    |||||    
T  42803546 taaaa 42803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 361
Target Start/End: Original strand, 42945158 - 42945222
Alignment:
Q  297 aattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||| |||||| || ||| ||||||||||||| ||  |||||||||||||||||||||||    
T  42945158 aattagtccctgtaattgctaatcctgacaatttacccttatattgtttaatcatttaaaatttc 42945222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 36325232 - 36325342
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatc 349  Q
    |||||||||| ||||| || |||||| |||||||| ||| |||||||||| |||| |||||| |  ||| ||| ||||||| |||| | |||||| ||||    
T  36325232 aaggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgtt-aatc 36325330  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  36325331 atttaaaatttc 36325342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 21433076 - 21433018
Alignment:
Q  296 aaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||||||| ||||||||  |||| |||||||||||| || |||||||||||||||||    
T  21433076 aaattagtccatgtaatcgttaattttgacaatttacccttgcattgtttaatcattta 21433018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 27500492 - 27500422
Alignment:
Q  265 tgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctt 335  Q
    ||||||||||||||||||| | |||||||||||||| |||| ||||||||  ||| |||| || |||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctgaaaaattacctt 27500422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 38845697 - 38845588
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatca 350  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| |||||||    
T  38845697 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatca 38845599  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  38845598 tttaaaatttc 38845588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 1425430 - 1425342
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||| ||||||  ||| |||||||||| |||| ||||||| | ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  1425430 tccttgtaattagaggtcgtttaaaaattggtcc-tgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 1425342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 2266891 - 2266830
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  2266891 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 2266830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 11763095 - 11763030
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaa 327  Q
    ||||||||||||| |||||||| |  ||||||||||||| |||| ||||||||| ||| |||||||    
T  11763095 atgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaatcctgacaa 11763030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 35756606 - 35756690
Alignment:
Q  276 tgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| |||||||||||||| |||  | ||||| | ||| ||||||||||| | ||  |||||||||||||||||||||||    
T  35756606 tgcaattaggggtcatttaaaaattggtct-tataatcactaatcctgacaatttatccttgaattgtttaatcatttaaaatttc 35756690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 38955722 - 38955811
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||| ||  || |||||||||| |||  ||||||||| ||| |||  ||||||||  | ||||||||||||||||||||||||    
T  38955722 tccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttc 38955811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 40776027 - 40775939
Alignment:
Q  273 ccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||||| |||||||||||| |||| |||||| || ||| |||||| ||| ||| | | |||| ||||||||||||||||||    
T  40776027 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattg-ttaatcatttaaaatttc 40775939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 34061758 - 34061648
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| || | ||||||||||||| |||| ||||||||||  ||| |||| |||| ||| ||  ||| || || || |||| ||||||||    
T  34061758 aaggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatca 34061659  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  34061658 tttaaaatttc 34061648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 44406866 - 44406916
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  44406866 atgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 44406916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 2266490 - 2266539
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 300  Q
    |||||||| | |||||||| | ||||||||||||||| ||||||||||||    
T  2266490 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatt 2266539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 12220821 - 12220870
Alignment:
Q  77 atttaattgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    |||||||||| |||||||| |||||||||  ||||| |||||||||||||    
T  12220821 atttaattgagaaacttttaacaaagacaaagattattttaaaatattaa 12220870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 34060488 - 34060593
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| ||||||||||||  |||| |||||||||| |||| ||||||||| ||| ||  ||| ||  | || |||| |||||||||    
T  34060488 aggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattctttaatcat 34060587  T
Q  352 ttaaaa 357  Q
    ||||||    
T  34060588 ttaaaa 34060593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 35449986 - 35449898
Alignment:
Q  273 ccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| ||||||||||||||||||    
T  35449986 ccttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattg-ttaatcatttaaaatttc 35449898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 40775648 - 40775697
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 300  Q
    |||||||| | |||||||| | ||||||||||||||| ||||||||||||    
T  40775648 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatt 40775697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 2534695 - 2534803
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| ||||| || |||||||| | ||| |||||||||| || | ||||||||| ||| ||  |||  |||  || |||||||||||||||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcatt 2534794  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  2534795 taaaatttc 2534803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 4406088 - 4405980
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||| ||||||| ||  |||||||||| |||| |||| | |  ||| ||  ||||||||| || || ||||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatt 4405989  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  4405988 taaaatttc 4405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 355
Target Start/End: Original strand, 9337040 - 9337128
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||||| ||||||||||  ||||||| |||||| |||| ||||||||  |||| || ||| ||||| || ||  ||||||||||||||    
T  9337040 tttcgtctttgcaattagaggtcattttaaaattggtccttgtaatcgttaattttggcaaattaccctttcaaagtttaatcatttaa 9337128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 23768918 - 23768886
Alignment:
Q  17 aaatagtttatgcttttgtcaaaagtttctcaa 49  Q
    |||||||||||| ||||||||||||||||||||    
T  23768918 aaatagtttatgtttttgtcaaaagtttctcaa 23768886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 22502777 - 22502882
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| || ||||||||||||||||||    
T  22502777 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 22502876  T
Q  356 aatttc 361  Q
    ||||||    
T  22502877 aatttc 22502882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 22503202 - 22503092
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||| | || |||||||||||||    
T  22503202 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatca 22503103  T
Q  351 tttaaaatttc 361  Q
    |||||| ||||    
T  22503102 tttaaattttc 22503092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 21836457 - 21836348
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  21836457 aggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 21836358  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  21836357 ttaaaatttc 21836348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 31407301 - 31407196
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| || ||||||||||||||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 31407202  T
Q  356 aatttc 361  Q
    ||||||    
T  31407201 aatttc 31407196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 6517503 - 6517610
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||| ||||||||| || |||||||||||||||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaatttacc-ttgcattgtttaatcatt 6517601  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  6517602 taaaatttc 6517610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 7905244 - 7905351
Alignment:
Q  254 gcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattt 353  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| || |||| |||||||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcattt 7905343  T
Q  354 aaaatttc 361  Q
    ||||||||    
T  7905344 aaaatttc 7905351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 7160807 - 7160912
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||| ||||||||  || ||||||||||||||||||    
T  7160807 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaa 7160906  T
Q  356 aatttc 361  Q
    ||||||    
T  7160907 aatttc 7160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 7161231 - 7161122
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||||| | ||||| | ||| ||||||||||||| || ||||||||||||||    
T  7161231 aggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatcat 7161132  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  7161131 ttaaaatttc 7161122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 21836035 - 21836139
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  21836035 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagt-cttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 21836133  T
Q  356 aatttc 361  Q
    ||||||    
T  21836134 aatttc 21836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 32593489 - 32593598
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||| ||||||||||||| || ||||  ||||||||    
T  32593489 aggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgttaatcat 32593588  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  32593589 ttaaaatttc 32593598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 31406878 - 31406986
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| |||  |||||  | || |||| ||||||||||    
T  31406878 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatcatt 31406977  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  31406978 taaaatttc 31406986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 7905671 - 7905561
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| |||||||||||||||||||||||| |||||||| ||||| |||| | ||||||| ||||||| ||||||||| || |||||||||||||    
T  7905671 aaggtttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatca 7905572  T
Q  351 tttaaaatttc 361  Q
    ||| |||||||    
T  7905571 tttcaaatttc 7905561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 15913551 - 15913656
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||  |||||| || |||||||  |||||||| || ||||||||||||||||||    
T  15913551 ttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcatttaa 15913650  T
Q  356 aatttc 361  Q
    ||||||    
T  15913651 aatttc 15913656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 14196613 - 14196722
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || ||||||| ||||||| |||| || |  |||||||    
T  14196613 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaatttagctttgcaattgttaatca 14196712  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  14196713 tttaaaattt 14196722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 21628143 - 21628034
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| |||  ||||||||| |||| ||||||||| ||| ||||||||||||| || |||||||||||||    
T  21628143 aaggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 21628044  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  21628043 tttaaaattt 21628034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 30337468 - 30337557
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||| ||||||||||||||||||    
T  30337468 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttc 30337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 33517543 - 33517642
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||| |||||||  || |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  33517543 atgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 33517642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 10781146 - 10781208
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  10781146 aggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgcaatcg 10781208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 12065223 - 12065328
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattg-tttaatcattta 354  Q
    ||||| ||| ||||| || |||||||||||| |||||||||||||||| | ||||||||| ||||||| ||||||||| ||  |||| ||||||||||||    
T  12065223 ttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagt-catgtaatcgctaattctggcaatttacccttgtattgttttaatcattta 12065321  T
Q  355 aaatttc 361  Q
    |||||||    
T  12065322 aaatttc 12065328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 14197011 - 14196904
Alignment:
Q  254 gcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcatt 352  Q
    ||||||| ||||| || ||||||||||||||||||| |||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||||    
T  14197011 gcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatcatt 14196913  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  14196912 taaaatttc 14196904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 12080650 - 12080744
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||||||||| ||| ||||||||||  ||| ||||||||| |||  || |||||||||  | ||||||||||||||||||||||||    
T  12080650 tttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcatttaaaatttc 12080744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 28498444 - 28498346
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||||||||||| ||||||||||  ||||||||||||| |||| ||||||||| ||| ||| |||  |||| | |||  |||||||||||||||||||    
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcatttaaaattt 28498346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 256 - 360
Target Start/End: Original strand, 25485956 - 25486060
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcattta 354  Q
    ||||| ||||| || ||||||||||||| |||||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||||||    
T  25485956 ttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatcattta 25486054  T
Q  355 aaattt 360  Q
    ||||||    
T  25486055 aaattt 25486060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 11392866 - 11392946
Alignment:
Q  281 ttaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||| ||| |||||||||| |||| ||||||||| ||| || | |||||||| || ||||||||||||||||||||||||    
T  11392866 ttaggagtcgtttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttc 11392946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 30725760 - 30725867
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| | |||||||||||| ||| |||||||||| |||  ||||||||| ||| ||| ||||||||| || || ||||||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatt 30725858  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  30725859 taaaatttc 30725867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 3059266 - 3059365
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||| | ||| |||||||  | |||| ||||||||| ||| ||  ||||||||| || ||||||||||||||||||||||||    
T  3059266 atgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 3059365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 28000784 - 28000674
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatc 349  Q
    |||||||| | || ||||| | ||||||||||||||| |||||||||||| |||  |||||| || ||||||| ||||||| |||| | |||| ||||||    
T  28000784 aaggcttattgatctgtttagcccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaatttagccttgcaattg-ttaatc 28000686  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  28000685 atttaaaatttc 28000674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 30803870 - 30803969
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| ||||||||| |||| ||| ||||||||||  ||  ||||||||  ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  30803870 atgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 30803969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 8418445 - 8418359
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaat 358  Q
    ||||||||||||||  || |||||||||| || | ||||||||| ||||||| |||||||||| | |||| |||||| |||||||||    
T  8418445 tccttgcaattaggaatcgtttaaaaattggttcttgtaatcgctaattctgtcaatttacctatgcattatttaattatttaaaat 8418359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 15913975 - 15913913
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||| |||| | ||||||    
T  15913975 aggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcg 15913913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 17734572 - 17734484
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||| |||||| | ||| ||||||||||  ||| ||||||||| ||| ||  ||||||||| || |||||||||||||||||||||||    
T  17734572 tccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcatttaaaattt 17734484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 8089441 - 8089551
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| || | ||| |||||||||| ||| |||||||||| |||| | ||||||  ||| ||  ||| ||||| || |||||||||||||    
T  8089441 aaggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatca 8089540  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  8089541 tttaaaatttc 8089551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 29810855 - 29810757
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||||||||||| ||||||||||  ||||||||||||| |||| ||||||| | |||  || |||  |||| | |||  |||||||||||||||||||    
T  29810855 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatcatttaaaattt 29810757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 362868 - 362929
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  362868 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 362929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 10781550 - 10781477
Alignment:
Q  287 gtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    |||||||||||||||| |  ||||||||  ||| ||||||||||| | || ||||||||||| |||||||||||    
T  10781550 gtcatttaaaaattagccattgtaatcgttaatcctgacaatttatccttgcattgtttaattatttaaaattt 10781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 25486326 - 25486215
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaat 348  Q
    ||||||||||| || || || |||||||||| || ||||| |||||||||| |||| |||||| || ||| | | ||||||| |||| | |||| |||||    
T  25486326 gaaggcttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattg-ttaat 25486228  T
Q  349 catttaaaatttc 361  Q
    |||||||||||||    
T  25486227 catttaaaatttc 25486215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 363227 - 363168
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  363227 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 363168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 30337827 - 30337784
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||||||| |||||||||||||| |||| |||||||||    
T  30337827 tccttgcaattaggggtcatttaaaaattggtccctgtaatcgc 30337784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 33646977 - 33647071
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| ||||| |||||| | ||| |||||||| |  ||| ||||||||| |||  || ||||||||| || |||| |||||||||||||||||||    
T  33646977 tttcatccttacaattaagggtcgtttaaaaagtgatccctgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatttc 33647071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 15116651 - 15116598
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||| ||||||||||||||||||| ||| |||||||||| ||||  ||||||||    
T  15116651 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgc 15116598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 22373087 - 22373026
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | |||| ||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  22373087 aaggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaat 22373026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 26463202 - 26463287
Alignment:
Q  276 tgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| ||| |||||||||| |||| |||| |||  ||| ||| ||| ||||| || ||  ||||||||||||||||||||    
T  26463202 tgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttc 26463287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 141159 - 141107
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||||||||||||||||||||||  || ||||||||||| || | ||||||||    
T  141159 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcg 141107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 149180 - 149128
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||||||||||||||||||||||  || ||||||||||| || | ||||||||    
T  149180 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcg 149128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 3059686 - 3059622
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| |||| ||||    
T  3059686 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgc 3059622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 8090336 - 8090248
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    |||||||||||||| ||| |||||||||| |||| |||| || | ||| ||  ||| ||||| || ||  |||||||||||||||||||    
T  8090336 tccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcatttaaaattt 8090248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 33517964 - 33517900
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| |||| ||||    
T  33517964 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgc 33517900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 32306422 - 32306532
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||  |||||||||||| || |||||||||||||    
T  32306422 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatca 32306521  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  32306522 tttaaaatttc 32306532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 37778701 - 37778591
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||| ||||||||| || |||||||||||||    
T  37778701 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 37778602  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  37778601 tttaaaatttc 37778591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 29118967 - 29118856
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||| ||||||||| || ||||||||||||    
T  29118967 gaaggcataatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatc 29118868  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  29118867 atttaaaatttc 29118856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 3469198 - 3469308
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||| ||| ||||||||| || |||||||||||||    
T  3469198 aaggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatca 3469297  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  3469298 tttaaaatttc 3469308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 3596107 - 3596217
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||  ||||||||| ||| |||||||||||||||| |||| ||||||||    
T  3596107 aaggtttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatca 3596206  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  3596207 tttaaaatttc 3596217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 29685943 - 29686049
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| | || |||||||||||||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcattta 29686042  T
Q  355 aaatttc 361  Q
    |||||||    
T  29686043 aaatttc 29686049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 40788848 - 40788738
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||  || ||||||||||||     
T  40788848 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatct 40788749  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  40788748 tttaaaatttc 40788738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 47551491 - 47551601
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||||||| ||| ||| ||||||||| || |||||||||||||    
T  47551491 aaggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatca 47551590  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  47551591 tttaaaatttc 47551601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 52032567 - 52032457
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||| |||| |||| || |||||||||||||    
T  52032567 aaggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatca 52032468  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  52032467 tttaaaatttc 52032457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 13948779 - 13948888
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||  || ||||||||| || ||||||||||||||    
T  13948779 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 13948878  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  13948879 ttaaaatttc 13948888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 32306847 - 32306742
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32306748  T
Q  356 aatttc 361  Q
    ||||||    
T  32306747 aatttc 32306742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 10294567 - 10294675
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| || |||  |||||||||||| ||  ||||||||||||||    
T  10294567 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcatt 10294666  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  10294667 taaaatttc 10294675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 359
Target Start/End: Complemental strand, 3469627 - 3469520
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||| ||||||||| || ||||||||||||||    
T  3469627 aggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 3469528  T
Q  352 ttaaaatt 359  Q
    ||||||||    
T  3469527 ttaaaatt 3469520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 33506378 - 33506269
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||| ||| ||||||||  || |||||||||||||    
T  33506378 aaggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttacattgtttaatca 33506279  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  33506278 tttaaaattt 33506269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 40788423 - 40788528
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||||||| |||||||||||| |||| |||||||||||||||| | ||||||| |||||||||||||||||||| |||| |||||||||||||    
T  40788423 ttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaatttacctttgcattatttaatcatttaa 40788522  T
Q  356 aatttc 361  Q
    ||||||    
T  40788523 aatttc 40788528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 11910701 - 11910807
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||| ||  ||||||||| || |||||||||||||||||    
T  11910701 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 11910800  T
Q  355 aaatttc 361  Q
    |||||||    
T  11910801 aaatttc 11910807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 35643865 - 35643959
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  35643865 tttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttc 35643959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 255 - 360
Target Start/End: Complemental strand, 29686364 - 29686259
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||| ||| ||||||||| || |||||||||||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgcattgtttaatcattta 29686265  T
Q  355 aaattt 360  Q
    ||||||    
T  29686264 aaattt 29686259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 33156419 - 33156314
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||  || ||||||||| || ||||||||||||||||||    
T  33156419 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaa 33156320  T
Q  356 aatttc 361  Q
    ||||||    
T  33156319 aatttc 33156314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 41421975 - 41422080
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||||  |||  |||||||||||| || ||||||||||||||||||    
T  41421975 ttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgtttaatcatttaa 41422074  T
Q  356 aatttc 361  Q
    ||||||    
T  41422075 aatttc 41422080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 52032141 - 52032246
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||  ||||||||| || ||||||||||||||||||    
T  52032141 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 52032240  T
Q  356 aatttc 361  Q
    ||||||    
T  52032241 aatttc 52032246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 10294987 - 10294877
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||| || ||| |||||||||||||| | ||||||||| ||| ||  ||||||||| || |||||||||||||    
T  10294987 aaggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatca 10294888  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  10294887 tttaaaatttc 10294877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 343
Target Start/End: Original strand, 29118529 - 29118617
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgt 343  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||| || ||||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgt 29118617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 2796198 - 2796287
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| |||||||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  2796198 tccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 2796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 43998143 - 43998253
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||| ||||| | ||||||| || ||| ||||| | ||||||||||||||||||| ||||||||  ||||||| ||||||||| || |||||||||||||    
T  43998143 aaggtttaatgacgtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgcattgtttaatca 43998242  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  43998243 tttaaaatttc 43998253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 9294386 - 9294278
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| | ||||||| ||| ||| ||||||||| || |||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatt 9294287  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  9294286 taaaatttc 9294278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 4322591 - 4322695
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||  || |||||||||||||| |||||||||| |||| ||||||||| ||| ||||||| ||| | || ||||||||||||||    
T  4322591 aggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcat 4322689  T
Q  352 ttaaaa 357  Q
    ||||||    
T  4322690 ttaaaa 4322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 36314297 - 36314405
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||    
T  36314297 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatca 36314395  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  36314396 tttaaaattt 36314405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 51994295 - 51994206
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||||  || |||||||||| |||| ||||||||| ||||||| |||||||||  | ||||||||||||||||||||||||    
T  51994295 tccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcatttaaaatttc 51994206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 33506180 - 33506248
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctg 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||||||    
T  33506180 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaattctg 33506248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 42855733 - 42855625
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||||||||| |||| |||| ||| ||  |||  || | || |||| ||||||||||    
T  42855733 ggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatt 42855634  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  42855633 taaaatttc 42855625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 19741323 - 19741212
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| ||||||||| |||  || ||||||||| ||  |||||||||||    
T  19741323 gaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatc 19741224  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  19741223 atttaaaatttc 19741212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 13949121 - 13949071
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 303  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13949121 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 13949071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 43384321 - 43384391
Alignment:
Q  291 tttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| |||| ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  43384321 tttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 43384391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 360
Target Start/End: Original strand, 10770493 - 10770597
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcattta 354  Q
    ||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||||||    
T  10770493 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatcattta 10770591  T
Q  355 aaattt 360  Q
    ||||||    
T  10770592 aaattt 10770597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 23458408 - 23458299
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||| | ||| |||||||||| |||  ||||||||| ||| ||  ||||||||| || ||||||||||||||    
T  23458408 aggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcat 23458309  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  23458308 ttaaaatttc 23458299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 33689808 - 33689699
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| || ||||||||||| ||| |||||||||| || | ||||||||| ||| ||| ||||||||| || |||| |||||||||    
T  33689808 aggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcat 33689709  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  33689708 ttaaaatttc 33689699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 42342790 - 42342899
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| ||||| |||||||| ||| |||||||||| |||| |||||| || | | ||| ||||||||| || ||||||||||||||    
T  42342790 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatcat 42342889  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  42342890 ttaaaatttc 42342899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 10307765 - 10307693
Alignment:
Q  289 catttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||||||  ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  10307765 catttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10307693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 4323621 - 4323526
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaa 357  Q
    |||||||||  || |||||||||||||| |||||||||| |||| ||||||||| ||| ||| ||| ||| | || ||||||||||||||||||||    
T  4323621 atgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaa 4323526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 360
Target Start/End: Original strand, 46474824 - 46474922
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||  ||||||||| |||  || ||||||||| || |||||||||||||||||||||||    
T  46474824 atgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaaaattt 46474922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 360
Target Start/End: Original strand, 47856396 - 47856494
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||||||||||| |||||||| ||||| |||||||||| |||| ||||||||  ||| ||||||| ||||  || ||  |||||||||||||||||||    
T  47856396 atgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcatttaaaattt 47856494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 48322775 - 48322666
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || ||||||||||||||||||| |||||||||| |||| |||||| |  ||| ||| ||||||| |||| | |||| |||||||    
T  48322775 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattg-ttaatca 48322677  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  48322676 tttaaaatttc 48322666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 36314695 - 36314587
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcat 351  Q
    |||||||| ||||| || ||||||||||||||||||| |||||||||| |||| |||||| |  ||| ||| ||||||| |||| | |||| ||||||||    
T  36314695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattg-ttaatcat 36314597  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  36314596 ttaaaatttc 36314587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 40758147 - 40758252
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||    |||||||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctg-caatttacc--cgcattgtttaatcatt 40758243  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  40758244 taaaatttc 40758252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 48322376 - 48322484
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatca 350  Q
    ||||||||| ||||| || |||||||||||||| | ||||||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| |||||||    
T  48322376 aggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatca 48322474  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  48322475 tttaaaattt 48322484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 40033885 - 40033777
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| ||   | |||| || ||| ||| ||||||||| || ||||||||||||||    
T  40033885 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatcat 40033786  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  40033785 ttaaaattt 40033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 40506207 - 40506107
Alignment:
Q  262 atgtgtttcgtccttgcaatta-ggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    |||| |||| |||||||||||| || ||||||||||| || || | ||||||||  ||| ||||||||||||| || |||| ||||||||||||||||||    
T  40506207 atgtatttcatccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaattt 40506108  T
Q  361 c 361  Q
    |    
T  40506107 c 40506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 9368720 - 9368621
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| ||||||||||||||||||| ||| |||||||||| |||| |||||||   ||| ||  ||| ||||  || ||||||||||||||||||||||||    
T  9368720 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaatttc 9368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 10770885 - 10770780
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatcattta 354  Q
    ||||| ||||| || |||||| ||||||||||||||||||||||| |||| |||||| |  ||| ||| ||||||| |||| | |||| |||||||||||    
T  10770885 ttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattg-ttaatcattta 10770787  T
Q  355 aaatttc 361  Q
    |||||||    
T  10770786 aaatttc 10770780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 33154877 - 33154951
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaa 327  Q
    |||||||  ||||||||||||| |||||||||| |||||||||||||| |||| ||||||||  ||| |||||||    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaa 33154951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 43607789 - 43607841
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    ||||||||||||| |||||||| |||||||||||||||| |||| ||||||||    
T  43607789 atgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcg 43607841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 1079640 - 1079541
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||| ||| |||||||||| |||||||||||||| |||| ||||||||  ||| ||| ||| ||| | || ||  |||||||| |||||||||||    
T  1079640 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcttttaaaatttc 1079541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 6956257 - 6956356
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| ||||||||||  |||||||||||||||||| | ||||||  ||| ||| ||| ||||| || ||   || ||||||||||||||||    
T  6956257 atgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatcatttaaaatttc 6956356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 304
Target Start/End: Complemental strand, 3596486 - 3596448
Alignment:
Q  266 gtttcgtccttgcaattaggcgtcatttaaaaattagtc 304  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  3596486 gtttcgtccttgcaattaggcgtgatttaaaaattagtc 3596448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 8041615 - 8041724
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatca 350  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| |||||||    
T  8041615 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatca 8041713  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  8041714 tttaaaatttc 8041724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 55052638 - 55052568
Alignment:
Q  291 tttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| |||| ||||||||  |||  || |||||||||| | ||||||||||||||||||||||||    
T  55052638 tttaaaaattggtccatgtaatcgttaatcatggcaatttacctctgcattgtttaatcatttaaaatttc 55052568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 23276402 - 23276349
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    ||||||||| ||| |||||||||| |||||||||||||| |||| |||||||||    
T  23276402 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgc 23276349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 33429106 - 33429159
Alignment:
Q  73 aaagatttaattgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    ||||| ||||||||||||||||||| ||||| | |||||| |||||||||||||    
T  33429106 aaagacttaattgaaaaacttttgataaagatattgattattttaaaatattaa 33429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 1078546 - 1078598
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||| |||||||| |||||||||| |||||||||||||| |||| ||||||||    
T  1078546 atgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcg 1078598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 21186114 - 21186015
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||| |||| |||||||||| |||||||||||||| || | ||||||||  ||| ||| ||| ||||| || ||    ||||||||||||||||||    
T  21186114 atgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcatttaaaatttc 21186015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 32431611 - 32431512
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||| || ||||||| |||||||||||||| |||| || |||||  ||| ||||||| ||| | || ||  |||||| |||||||||||||    
T  32431611 atgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaatttc 32431512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 54466432 - 54466482
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  54466432 atgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 54466482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 54466811 - 54466761
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  54466811 atgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 54466761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 55447172 - 55447222
Alignment:
Q  76 gatttaattgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    ||||||||||| |||||||||| |||||||| || || |||||||||||||    
T  55447172 gatttaattgagaaacttttgagaaagacagagactattttaaaatattaa 55447222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 16298281 - 16298224
Alignment:
Q  76 gatttaattgaaaaacttttgacaaagacagtgattactttaaaatattaacaaagtc 133  Q
    ||||||||||| || | ||||||||| |||| ||||| ||||||||||||| ||||||    
T  16298281 gatttaattgagaatcatttgacaaacacagagattattttaaaatattaataaagtc 16298224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 25107211 - 25107260
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 300  Q
    |||||||||  ||||||||| ||| |||||||||| ||||||||||||||    
T  25107211 aaggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaatt 25107260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 40758539 - 40758491
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 300  Q
    ||||||||  |||| |||| |||||||||||||| ||||||||||||||    
T  40758539 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaatt 40758491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 48338529 - 48338565
Alignment:
Q  69 gaccaaagatttaattgaaaaacttttgacaaagaca 105  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  48338529 gaccagagatttaattgagaaacttttgacaaagaca 48338565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 919 - 1028
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||  || ||||||||| || ||||||||||||||    
T  919 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 1018  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  1019 ttaaaatttc 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 1261 - 1211
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 303  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1261 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 361
Target Start/End: Complemental strand, 12662 - 12557
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| || ||||||||||||||||||    
T  12662 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 12563  T
Q  356 aatttc 361  Q
    ||||||    
T  12562 aatttc 12557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 12249 - 12348
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||| || |||||| || | || |||||||||||      |||||| ||| ||| ||||||||| || ||||||||||||||||||    
T  12249 ttaatgatgtgtttcgtcgttacaattaagcattatataaaaattagt------aatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 12342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 11567 - 11458
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| || ||||||||||||||    
T  11567 aggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 11468  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  11467 ttaaaatttc 11458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 11143 - 11248
Alignment:
Q  256 ttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||| |||||||||||| |||||||||| |||||| ||||||||||||  ||| ||||| |||  || ||||||||| || ||||||||||||||||||    
T  11143 ttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttacccttgcattgtttaatcatttaa 11242  T
Q  356 aatttc 361  Q
    ||||||    
T  11243 aatttc 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 17544475 - 17544367
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||| ||| ||||||||| || ||||||||||||||    
T  17544475 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 17544376  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  17544375 ttaaaattt 17544367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 33871339 - 33871447
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||| ||||||||||||| | ||||||||||||||||||| ||||||||| ||||||| ||||||||| || |||||||||||||||    
T  33871339 ggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 33871438  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  33871439 taaaatttc 33871447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 8875449 - 8875557
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||| ||| ||||||||  || |||||||||||||||    
T  8875449 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatt 8875548  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  8875549 taaaatttc 8875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 33871766 - 33871656
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||||||   ||| ||| ||||||||| || |||||||||||||    
T  33871766 aaggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgcattgtttaatca 33871667  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  33871666 tttaaaatttc 33871656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 20152781 - 20152889
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||||||  ||||||||| ||| |||  |||||||| || |||||||||||||||    
T  20152781 ggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatt 20152880  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  20152881 taaaatttc 20152889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 3656846 - 3656743
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||||||||  ||||||||| |||||||| |||||| | || |||||||||||||    
T  3656846 aaggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaattctgataatttatccttgcattgtttaatca 3656747  T
Q  351 ttta 354  Q
    ||||    
T  3656746 ttta 3656743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 20153342 - 20153236
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||   |  ||||||||| || ||||||||||||||    
T  20153342 aggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaa---tcgcaatttacccttgcattgtttaatcat 20153246  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  20153245 ttaaaatttc 20153236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 5993888 - 5993997
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| ||||||| ||||||||| || ||||||||||||||    
T  5993888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcat 5993987  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  5993988 ttaaaatttc 5993997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 22298557 - 22298650
Alignment:
Q  268 ttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| |||   | ||||||||| || ||||||||||||||||||||||||    
T  22298557 ttcgtcattgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttacattgtttaatcatttaaaatttc 22298650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 5024437 - 5024338
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||| |||  ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  5024437 atgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaatttc 5024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 38475413 - 38475319
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||||||||||| ||| |||||||||| |||| ||||||||  ||| ||||||||||||| || ||||||||||||||||||||||||    
T  38475413 tttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 38475319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 16157285 - 16157176
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| | ||||||  ||| ||||||||||||| || |||||||||||||    
T  16157285 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatca 16157186  T
Q  351 tttaaaattt 360  Q
    ||||||||||    
T  16157185 tttaaaattt 16157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 35920588 - 35920504
Alignment:
Q  277 gcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||| ||| |||||||||| |||| ||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||    
T  35920588 gcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttc 35920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 35512157 - 35512256
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||| | ||| |||||||||| |||| ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  35512157 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 35512256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 39453309 - 39453408
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||| |||  ||||||||| ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  39453309 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 39453408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 11761747 - 11761857
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||  | |||||||||||||    
T  11761747 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatca 11761846  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  11761847 tttaaaatttc 11761857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 24547555 - 24547445
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||| | ||||||| ||| ||| ||||||||| || |||||||||||||    
T  24547555 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatca 24547456  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  24547455 tttaaaatttc 24547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 8875684 - 8875632
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8875684 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcg 8875632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 21288083 - 21287975
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||| |||||||| ||||||| |||||| |||| ||||||||||| ||| ||||||||| |||  || ||||  ||| || |||||||||||||||    
T  21288083 ggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatcatt 21287984  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  21287983 taaaatttc 21287975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 6758264 - 6758154
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatc 349  Q
    |||||||||| ||||| || ||||||||||||||||||| |||||||||| |||| |||||| |  ||||||| |||||| ||||| | |||| ||||||    
T  6758264 aaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattg-ttaatc 6758166  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  6758165 atttaaaatttc 6758154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 16082986 - 16083085
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| ||||| |||||||| ||  ||||||||||||||| ||||||||  ||| ||| ||||||||| || ||||||||||||||||||||||||    
T  16082986 atgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttc 16083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 38442077 - 38442176
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| || ||||||||||| || ||||||||||| |||  ||||||||| ||| ||||||||||||  || ||||||||||||||||||||||||    
T  38442077 atgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 38442176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 6150452 - 6150562
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| || | ||||||| | ||| |||||||||||   || |||||||||||||    
T  6150452 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatca 6150551  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  6150552 tttaaaatttc 6150562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 13362647 - 13362549
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||| ||||||||| |||  || ||||||||| || |||||||||||||||||||||||    
T  13362647 atgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaattt 13362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 17202413 - 17202507
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| ||||| |||||||| ||| |||||||||| |||  ||||||||| ||| ||||||||||||| || |||||||||| |||||||||||||    
T  17202413 tttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcatttaaaatttc 17202507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 17544077 - 17544155
Alignment:
Q  282 taggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||||| |||||||||||||||| |||||| || ||| ||||||||||||  || |||||||||||||||||||||||    
T  17544077 taggcgtgatttaaaaattagtccctgtaattgctaatcctgacaatttactcttgcattgtttaatcatttaaaattt 17544155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 3529251 - 3529162
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||  ||| ||| |||||||||  | ||||||||||||||||||||||||    
T  3529251 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttc 3529162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 13962883 - 13962972
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| |||||| || ||| |||  |||||||| || ||||||||||||||||||||||||    
T  13962883 tccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttc 13962972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 27587167 - 27587256
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||  | ||| ||||||||||||||||||||    
T  27587167 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcatttaaaatttc 27587256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 30005175 - 30005260
Alignment:
Q  275 ttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaattt 360  Q
    ||||||||||| ||||||||||||||||| | | |||| || ||| |||||||||||| ||| |||| ||||||||||||||||||    
T  30005175 ttgcaattaggtgtcatttaaaaattagttcatataattgctaatcctgacaatttacatttgcattatttaatcatttaaaattt 30005260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 20814564 - 20814456
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||  ||||||||| ||| ||  ||||||||  || ||||||||||||||    
T  20814564 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcat 20814465  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  20814464 ttaaaattt 20814456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 19892727 - 19892628
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||  ||| |||||||||| |||  ||||||||  ||| || |||||||||| || ||||||||||||||||||||||||    
T  19892727 atgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttc 19892628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 24141461 - 24141560
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||  ||| ||| ||| ||| | || ||  ||||||||||||||||||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaatttc 24141560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 29646775 - 29646682
Alignment:
Q  267 tttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||||| ||||||| ||| ||||||| || || | ||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||    
T  29646775 tttcatccttgtaattaggagtcgtttaaaa-ttggtgcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 29646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 14194851 - 14194743
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    |||||||| ||||| |||| |||||| ||||||| ||| |||||||||| | || ||||||  | ||| ||| ||||||||| || ||||||||||||||    
T  14194851 aggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattgg-ccatgtaattactaatcctggcaatttacccttgcattgtttaatcat 14194753  T
Q  352 ttaaaatttc 361  Q
    ||||||||||    
T  14194752 ttaaaatttc 14194743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 18670199 - 18670307
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    ||||||||||  |||| |||| ||||||||| |||| ||| |||||||||| |||| ||||||||| |||     ||||||||| || ||||||||||||    
T  18670199 gaaggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatcg---caatttacccttgcattgtttaatc 18670295  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  18670296 atttaaaatttc 18670307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 18247095 - 18247192
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| |||||||||| |||| ||||||||| |||  || ||||||||| || |||| |||||||||||| ||||||    
T  18247095 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcatttagaatttc 18247192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 20840532 - 20840640
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcat 351  Q
    ||||||||  |||| |||| |||||||||||||| ||| |||||||||| || | ||||||||  ||| ||  ||||||||| || ||||||||||| ||    
T  20840532 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatgat 20840631  T
Q  352 ttaaaattt 360  Q
    |||||||||    
T  20840632 ttaaaattt 20840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 186440 - 186527
Alignment:
Q  274 cttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| ||||||| ||| ||||||||||||||  ||||||||  |||||||  |||||| | || ||||||||||||||||||||||||    
T  186440 cttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcatttaaaatttc 186527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 32242251 - 32242350
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| |||| |||||||||||||| ||| ||||||||||  ||| |||||| || |||  || ||||||||  || ||||||||||||||||||||||||    
T  32242251 atgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttc 32242350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 41930514 - 41930624
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatc 349  Q
    |||||||||| ||||| || ||||||||||||||  ||| |||||||||| |||| |||||| || ||| ||| ||||||| |||| | |||| ||||||    
T  41930514 aaggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattg-ttaatc 41930612  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  41930613 atttaaaatttc 41930624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 41930916 - 41930806
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaat 348  Q
    ||||| ||||| ||||| || ||||||| |||||||||||||||||||||| |||| |||||| || ||| ||  ||||||| |||| | |||| |||||    
T  41930916 gaaggtttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattg-ttaat 41930818  T
Q  349 catttaaaattt 360  Q
    ||||||||||||    
T  41930817 catttaaaattt 41930806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 28771247 - 28771158
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||| ||||||| ||| |||||||||| |||| ||||||||| |||  || |||||||||  |  |||||||||||||||||||||||    
T  28771247 tccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatttaaaatttc 28771158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 331
Target Start/End: Original strand, 6757883 - 6757943
Alignment:
Q  271 gtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta 331  Q
    |||||||||||||||||||||||||||||| |||| |||||| || ||| ||| |||||||    
T  6757883 gtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaattta 6757943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 361
Target Start/End: Complemental strand, 31482802 - 31482691
Alignment:
Q  250 gaaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaat 348  Q
    ||||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| |||||    
T  31482802 gaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaat 31482704  T
Q  349 catttaaaatttc 361  Q
    |||||||||||||    
T  31482703 catttaaaatttc 31482691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 40150233 - 40150181
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcg 314  Q
    |||||||||||||||||||||||| ||||||| |||||| |||| ||||||||    
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcg 40150181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 11047436 - 11047545
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtca-tttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatc 349  Q
    |||||||||  |||| ||||  ||||||||||||| |||| |||||||||| ||||  |||||||| |||  || ||||||||| || ||||||||||||    
T  11047436 aaggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaatt-gtccc-gtaatcgctaatcttggcaatttacccttgcattgtttaatc 11047533  T
Q  350 atttaaaatttc 361  Q
    ||||||||||||    
T  11047534 atttaaaatttc 11047545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 21287797 - 21287851
Alignment:
Q  307 tgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||| ||||||| ||||||||| ||  |||||||||||||||||||||||    
T  21287797 tgtaatcgctaattctggcaatttacccttgtattgtttaatcatttaaaatttc 21287851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 297013 - 297073
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  297013 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 297073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 1505966 - 1506026
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  1505966 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 1506026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 39453729 - 39453665
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||  |||| |||| |||||||||||||| |||||||||||||| |||| |||| ||||    
T  39453729 aaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgc 39453665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 8840009 - 8840060
Alignment:
Q  75 agatttaattgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    |||||| ||||||||||||||||||||||||| || || ||| |||||||||    
T  8840009 agatttgattgaaaaacttttgacaaagacagggactattttgaaatattaa 8840060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 31482402 - 31482461
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||| | |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  31482402 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 31482461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 1506355 - 1506305
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaat 312  Q
    |||||||| | ||||||||||||||| |||||||||||| |||| ||||||    
T  1506355 atgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaat 1506305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 310
Target Start/End: Complemental strand, 6150849 - 6150791
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgta 310  Q
    ||||||||  |||| |||| |||||||||||||| ||| ||||||||||||||| ||||    
T  6150849 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgta 6150791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 9637710 - 9637660
Alignment:
Q  76 gatttaattgaaaaacttttgacaaagacagtgattactttaaaatattaa 126  Q
    ||||||||||||||| || |||||||||||| || || |||||||||||||    
T  9637710 gatttaattgaaaaatttatgacaaagacagagactattttaaaatattaa 9637660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 21265571 - 21265461
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatca 350  Q
    ||||||||  |||| |||| ||||| |||||| | ||| |||||||||| || | ||||||||| |||  || |||||| ||| || ||||||||||| |    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaatta 21265472  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  21265471 tttaaaatttc 21265461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 33676619 - 33676573
Alignment:
Q  86 aaaaacttttgacaaagacagtgattactttaaaatattaacaaagt 132  Q
    |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  33676619 aaaaacttttgataaaaacagtgattattttaaaatattaataaagt 33676573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 36184730 - 36184772
Alignment:
Q  80 taattgaaaaacttttgacaaagacagtgattactttaaaata 122  Q
    |||||||||||||||||||||||||||||| || ||| |||||    
T  36184730 taattgaaaaacttttgacaaagacagtgactattttgaaata 36184772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 15376573 - 15376622
Alignment:
Q  79 ttaattgaaaaacttttgacaaagacagtgattactttaaaatattaaca 128  Q
    |||||| |||||||||||||||||||| | | || |||||||||||||||    
T  15376573 ttaattaaaaaacttttgacaaagacattaaatagtttaaaatattaaca 15376622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 361
Target Start/End: Complemental strand, 28269745 - 28269708
Alignment:
Q  324 acaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||| || ||||||||||||||||||||||||    
T  28269745 acaatttacccttgcattgtttaatcatttaaaatttc 28269708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 355
Target Start/End: Original strand, 40148907 - 40149000
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaa 355  Q
    ||||||||||||| |||||||||   ||||||||||||| |||| ||||||||  ||| ||  ||| ||||| || ||  ||||||||||||||    
T  40148907 atgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaa 40149000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 297402 - 297303
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatcatttaaaattt 360  Q
    |||||||| | ||||| ||||||||| |||||||||||| |||| |||||| || ||| ||| || ||| ||| | | |||| |||||||||||||||||    
T  297402 atgtgtttagcccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatcatttaaaattt 297304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 361
Target Start/End: Original strand, 2395 - 2501
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||| ||  ||||||||| || |||||||||||||||||    
T  2395 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 2494  T
Q  355 aaatttc 361  Q
    |||||||    
T  2495 aaatttc 2501  T

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Target: scaffold0042 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 255 - 361
Target Start/End: Complemental strand, 12204 - 12098
Alignment:
Q  255 cttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcattta 354  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||| |||  |||||||| ||| ||  ||||||||| || |||||||||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 12105  T
Q  355 aaatttc 361  Q
    |||||||    
T  12104 aaatttc 12098  T

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Target: scaffold0031 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 68965 - 69073
Alignment:
Q  253 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatt 352  Q
    |||||||  |||| |||| |||||||||||||| |||||||||||||| |||| ||||||| | ||| ||| ||||||||| || |||||||||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 69064  T
Q  353 taaaatttc 361  Q
    |||||||||    
T  69065 taaaatttc 69073  T

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Target: scaffold0005 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 37993 - 37883
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatca 350  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||  ||||||||| ||| ||||||||||||| ||  ||||||||||||    
T  37993 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatca 37894  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  37893 tttaaaatttc 37883  T

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Target: scaffold0008 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 239970 - 239871
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||||||| ||||| |||||||||||||| || | ||||||||  ||| ||| ||| ||||| |||||  ||||||||||||||||||||    
T  239970 atgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttc 239871  T

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Target: scaffold0205 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 21007 - 21116
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattta-cctttccattgtttaatc 349  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||| |||| |||||| || ||| ||  ||||||| |||| | |||| ||||||    
T  21007 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattg-ttaatc 21105  T
Q  350 atttaaaattt 360  Q
    |||||||||||    
T  21106 atttaaaattt 21116  T

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Target: scaffold0007 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 1788 - 1877
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| || ||||||| |||| ||||||||| |||  || ||||||||| || ||||||||||||||||||||||||    
T  1788 tccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 1877  T

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Target: scaffold0128 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 19866 - 19965
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||| ||||||||||||||||| | ||| |||||||||| |||| ||| ||||| ||| ||  ||| |||||||| |||| |||||||||||||||||||    
T  19866 atgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcatttaaaatttc 19965  T

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Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 139691 - 139780
Alignment:
Q  272 tccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||| ||| ||| |||||||||  |  |||| ||||||||||||||||||    
T  139691 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcatttaaaatttc 139780  T

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Target: scaffold0775 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 6397 - 6298
Alignment:
Q  262 atgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaatttacctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||| |||||| ||||||| |||| ||||||||| |||| | ||||||  ||| ||  ||| ||||| || || |||||||||||||||||||||    
T  6397 atgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaatttc 6298  T

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Target: scaffold0559 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 1253 - 1341
Alignment:
Q  273 ccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatcatttaaaatttc 361  Q
    ||||||||||||||| |||||||||||| |||| |||||| || ||| |||||| ||| ||| | | |||| ||||||||||||||||||    
T  1253 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattg-ttaatcatttaaaatttc 1341  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 141992 - 141883
Alignment:
Q  252 aggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgcgaattctgacaattt-acctttccattgtttaatca 350  Q
    ||||||| | |||||||| | ||||||||||||||| ||||||||||||  ||| |||||| || ||| ||| || ||| ||| | | |||| |||||||    
T  141992 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattg-ttaatca 141894  T
Q  351 tttaaaatttc 361  Q
    |||||||||||    
T  141893 tttaaaatttc 141883  T

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Target: scaffold0707 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 6509 - 6445
Alignment:
Q  251 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccgtgtaatcgc 315  Q
    |||||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| |||| ||||    
T  6509 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgc 6445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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