View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16373_high_2 (Length: 258)
Name: NF16373_high_2
Description: NF16373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16373_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 36786192 - 36785948
Alignment:
| Q |
1 |
ttttgcttttcccctttattcttcttacctccatcatcaccccctttcttaccacctccattaccattttttacctcaccgtaatttccacttttaccct |
100 |
Q |
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| T |
36786192 |
ttttgcttttcccctttattcttcttacctccatcatcaccccctttcttaccacctccattaccattttttacctcaccgtaatttccacttttaccct |
36786093 |
T |
|
| Q |
101 |
tcatatgcatttgcataggtagatccataatatctccttttttagctttagcataattaccaccccctccctttgggatgttcatggcagcaggcccatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36786092 |
tcatatgcatttgcataggtagatccataatatctccttttttagctttagcataattaccaccccctccctttgggatgttcatggcagcaggcccatt |
36785993 |
T |
|
| Q |
201 |
catcatcataccaccaccaggccctagctgtggaccacgaccatt |
245 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
36785992 |
catcatcataccaccaccaggccctagctgtggcccacgaccatt |
36785948 |
T |
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