View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16374_high_1 (Length: 270)
Name: NF16374_high_1
Description: NF16374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16374_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 254
Target Start/End: Original strand, 10596157 - 10596401
Alignment:
| Q |
10 |
aagaatatggagtggatggttgccctttaatgtgaagggtgatccgaacatgtttcgttatggagatggaataagaagccttgagaaggaaactgatagc |
109 |
Q |
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| T |
10596157 |
aagaatgtggagtggatggttgccctttgatgtgaagggtgatccgaacatgtttcgtgatggagatggaataagaagccttgagaaggaaactgatagc |
10596256 |
T |
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| Q |
110 |
aaaaaagaggaggctgaaaatggaagaatggaacagaaacatcagagtgatcaaaagagatccgagtttccatttccgttctttctgtttccttactaca |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10596257 |
aaaaaagaggaggctgaaaatggaagaatggaacagaaacatcagagtgatcaaaagagatccgagtttccatttccgttctttctgtttccttactaca |
10596356 |
T |
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| Q |
210 |
ataatcaagaggaaggaggaaaggccaaatcagatgatgttaaat |
254 |
Q |
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| T |
10596357 |
ataatcaagaggaaggaggaaaggccaaatcagatgatgttaaat |
10596401 |
T |
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