View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16375_high_1 (Length: 1068)
Name: NF16375_high_1
Description: NF16375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16375_high_1 |
 | |
|
| [»] scaffold0070 (4 HSPs) |
| | |
|
| [»] scaffold0830 (1 HSPs) |
| | |
|
| [»] scaffold0526 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 388; Significance: 0; HSPs: 43)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 462
Target Start/End: Original strand, 25489083 - 25489547
Alignment:
| Q |
1 |
atagtaacttatactgttcttgtctcatcaaacagattttaagataaattctcagccaaaactgaaaaaccagcaattatgtagaaactagaatcgtcca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25489083 |
atagtaacttatactgttcttgtctcatcaaacagattttaagataaattctcagccaaaactgaaaaaccagcaattatgtagaaactagaatcgtcca |
25489182 |
T |
|
| Q |
101 |
aaggtgaatggaccaacatgcatttgaaatttactttttatttgtgaatttttgtaaaagatgtcaagagacaaaagcagcaacaactattcatgatata |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25489183 |
aaggtgaatggaccaacatgcatttgaaatttactttttatttgtgaatttttgtaaaagatgtcaagagacaaaagcagcaacaactattcatgatata |
25489282 |
T |
|
| Q |
201 |
tcatcaaagagtttaattactggaagcaattgnnnnnnnnnaaacatcttttttgcttgttgatttcgggcaaacaatatatttttgtacttttgacaca |
300 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
25489283 |
tcatcaaatagtttaattactggaagcaattgtttttttttaaacatcttttttgcttgttgatttcgtgcaaacaatatatttttgtacttttgacaca |
25489382 |
T |
|
| Q |
301 |
agattatgtagcaacctagtaagtagacaccacctgatatgacataaaagacagaaatattcaaccaaaaactgattggaaagttcagtaatagaagata |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
25489383 |
agattatgtagcaacctagtaagtagacaccacctgatatgacataaaagacagaaatattcaatcaaaaactgattagaaagttcagtaatagaagatc |
25489482 |
T |
|
| Q |
401 |
ttttcttcccattcttacacaatgagtcaagactctcactac---tctcctccaaatactgcacc |
462 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || ||||| ||||||||||| |||||||| |
|
|
| T |
25489483 |
ttttcttcctattcttacacaatgagtcaagacccttactactattctcctccaaagactgcacc |
25489547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 723 - 1050
Target Start/End: Original strand, 25694948 - 25695275
Alignment:
| Q |
723 |
ttacatcagtttacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattc |
822 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
25694948 |
ttacatcagtttacaaatgaaaataactagactgtgtttgcgcgaacaaccaaagtgttgattttgattagcgtcgcaataacatctgccatattgattc |
25695047 |
T |
|
| Q |
823 |
ttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaa |
922 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25695048 |
ttgcttcaggtgaatcctcacaacaacttagagctaaactaaaaatagatgacatgtgagtcaatatattatcaatttggtccccagttatttggactaa |
25695147 |
T |
|
| Q |
923 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttttt |
1022 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
25695148 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttctt |
25695247 |
T |
|
| Q |
1023 |
cttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
25695248 |
cttgtgaagatttccattagcataatcc |
25695275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 723 - 1050
Target Start/End: Original strand, 25646630 - 25646957
Alignment:
| Q |
723 |
ttacatcagtttacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattc |
822 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
25646630 |
ttacatcagtttacaaatgaaaataactagactgtgtttgcgccaacaaccaaagtcttgattttgtttagcgtcgcaataacatctgccatattgattc |
25646729 |
T |
|
| Q |
823 |
ttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaa |
922 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
25646730 |
ttgcttcaggtgaatcttcacaacaattcagggctaaactaaaaatagatgacatgtgagtcaatatatcatcaatttggtccccagttctttggactaa |
25646829 |
T |
|
| Q |
923 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttttt |
1022 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
25646830 |
atttgaatccatgacctccataattgaattaggcaatgatctactgatccatgtcttcaagcttagttctgcaacaaacatatcatctattggctttctc |
25646929 |
T |
|
| Q |
1023 |
cttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
||||| |||||||||||||||||||||| |
|
|
| T |
25646930 |
cttgtaaagatttccattagcataatcc |
25646957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 741 - 1050
Target Start/End: Complemental strand, 24913526 - 24913217
Alignment:
| Q |
741 |
gaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatctt |
840 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24913526 |
gaaaataactagattgtgtttgcgccaacaaccaaagtcttgattttgattagcgtcgcaataacatctgccatattgattcttgcttcaggtgaatctt |
24913427 |
T |
|
| Q |
841 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
940 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
24913426 |
cacaacaaatcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtcccaagttatttggactaaatttgaatccatgacctc |
24913327 |
T |
|
| Q |
941 |
cataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccatt |
1040 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
24913326 |
cataattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcattattcttgtgaagatttccatt |
24913227 |
T |
|
| Q |
1041 |
agcataatcc |
1050 |
Q |
| |
|
|||||||||| |
|
|
| T |
24913226 |
agcataatcc |
24913217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 723 - 1050
Target Start/End: Original strand, 25489788 - 25490115
Alignment:
| Q |
723 |
ttacatcagtttacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattc |
822 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
25489788 |
ttacaacagtttacaaatgaaaataactagactgtgtttgcgccagcaactaaagtcttgattttgattagtgtcgcaataacatctgccatattgattc |
25489887 |
T |
|
| Q |
823 |
ttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaa |
922 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25489888 |
ttgcttcaggtgaatcttcacaacaactcatggctaaactaaaaatagatgacatgtgagtcaatatattatcaatttggtccccagttatttggactaa |
25489987 |
T |
|
| Q |
923 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttttt |
1022 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | |
|
|
| T |
25489988 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctattggttttctc |
25490087 |
T |
|
| Q |
1023 |
cttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
||||| |||||||||||||||||||||| |
|
|
| T |
25490088 |
cttgtaaagatttccattagcataatcc |
25490115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 723 - 1048
Target Start/End: Original strand, 25604225 - 25604550
Alignment:
| Q |
723 |
ttacatcagtttacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattc |
822 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
25604225 |
ttacatcagtttacaaatgaaaataactagactgcgtttgcgccaacaaccaaagtcttgattttgattagtgaagcaataacttctgccatattgattc |
25604324 |
T |
|
| Q |
823 |
ttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaa |
922 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
25604325 |
ttgcttcaggtgaatcttcacaacaactcagagctaaactaaaaatagatgacatgtgagtcaatatatcatcaatttcgtccccagttatttggactaa |
25604424 |
T |
|
| Q |
923 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttttt |
1022 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
25604425 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctattggctttctc |
25604524 |
T |
|
| Q |
1023 |
cttgtgaagatttccattagcataat |
1048 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
25604525 |
tttgtaaagatttccattagcataat |
25604550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 741 - 1050
Target Start/End: Complemental strand, 24875875 - 24875566
Alignment:
| Q |
741 |
gaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatctt |
840 |
Q |
| |
|
|||||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24875875 |
gaaaataactagaccctgtttgcgccaagaaccaaagccttgattttgattagcgacgcaataacatctgccgtattgattcttgcttcaggtgaatctt |
24875776 |
T |
|
| Q |
841 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
940 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24875775 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtcgatatatcatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
24875676 |
T |
|
| Q |
941 |
cataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccatt |
1040 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24875675 |
cataattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcctttttcttgtgaagatttccatt |
24875576 |
T |
|
| Q |
1041 |
agcataatcc |
1050 |
Q |
| |
|
|||||||||| |
|
|
| T |
24875575 |
agcataatcc |
24875566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 723 - 1050
Target Start/End: Original strand, 25799874 - 25800201
Alignment:
| Q |
723 |
ttacatcagtttacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattc |
822 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
25799874 |
ttacatcagtttacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgtcgcaataacatctgccatattgattc |
25799973 |
T |
|
| Q |
823 |
ttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaa |
922 |
Q |
| |
|
| || |||||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25799974 |
tggcatcaggtgattcttcacagcaattcaatgctaaactaaaaatatatgacatgtgagtcaatatatcatcaatttggtccccagttatttggactaa |
25800073 |
T |
|
| Q |
923 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttttt |
1022 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
25800074 |
atttgaatccatgacctccatgattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttctt |
25800173 |
T |
|
| Q |
1023 |
cttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
||||||||||||||||||| ||| |||| |
|
|
| T |
25800174 |
cttgtgaagatttccattaacatgatcc |
25800201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 741 - 1050
Target Start/End: Original strand, 25322262 - 25322571
Alignment:
| Q |
741 |
gaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatctt |
840 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25322262 |
gaaaataactagactgtgtttgcgccaacaaccaaagtgttgattttgattagcgtcgcaataacatctgccatattgattcttgctttaggtgaatctt |
25322361 |
T |
|
| Q |
841 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
940 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25322362 |
cacaacaactcagggctaaactaaaaatagatgatatgtgagtcgatagatcatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
25322461 |
T |
|
| Q |
941 |
cataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccatt |
1040 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25322462 |
cataatggaattaggcaatgattgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttcttcttgtgaagatttccatt |
25322561 |
T |
|
| Q |
1041 |
agcataatcc |
1050 |
Q |
| |
|
| ||| |||| |
|
|
| T |
25322562 |
atcattatcc |
25322571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 741 - 1015
Target Start/End: Original strand, 25385663 - 25385937
Alignment:
| Q |
741 |
gaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatctt |
840 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
25385663 |
gaaaataactagactgtgtttgcgccaacaaccaaagtgttgattttgattagcgtcgcaataacatctgccatattgattcttgcttcaagtgaatctt |
25385762 |
T |
|
| Q |
841 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
940 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25385763 |
cacaacaactcaaggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
25385862 |
T |
|
| Q |
941 |
cataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttgg |
1015 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25385863 |
cataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttgg |
25385937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 741 - 1050
Target Start/End: Original strand, 25714799 - 25715108
Alignment:
| Q |
741 |
gaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatctt |
840 |
Q |
| |
|
|||||||||||||| ||||||| |||| |||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
25714799 |
gaaaataactagaccctgtttgcgccaagaaccaaagcctttattttcattagcgacgcaataacatctgccatattaattcttgcttcaggtgaatttt |
25714898 |
T |
|
| Q |
841 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
940 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25714899 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtcgatatatcatcaatttggtccccagttatttggactaaatttgaatccatgacctc |
25714998 |
T |
|
| Q |
941 |
cataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccatt |
1040 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25714999 |
cataattgaattaggcaatgattcactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgttaagatttccatt |
25715098 |
T |
|
| Q |
1041 |
agcataatcc |
1050 |
Q |
| |
|
|||||||||| |
|
|
| T |
25715099 |
agcataatcc |
25715108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 743 - 1050
Target Start/End: Original strand, 25685255 - 25685562
Alignment:
| Q |
743 |
aaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatcttca |
842 |
Q |
| |
|
|||||||||||| ||||||| |||| |||||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
25685255 |
aaataactagaccctgtttgcgccaagaaccaaagcctttattttcattagcgacacaataacatctgccatattgattcttgcatcaggtgattcttca |
25685354 |
T |
|
| Q |
843 |
caacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctcca |
942 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
25685355 |
caacaattcaatgctaaactaaaaatagatgacatgtgagtcaatatatcatcaattgtgtccccagttagttggactaaatttgaatccaggacctcca |
25685454 |
T |
|
| Q |
943 |
taatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccattag |
1042 |
Q |
| |
|
|||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
25685455 |
taattgaattaggcaatgatccaatgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttcttcttgtgaaaatttccattag |
25685554 |
T |
|
| Q |
1043 |
cataatcc |
1050 |
Q |
| |
|
|||||||| |
|
|
| T |
25685555 |
cataatcc |
25685562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 734 - 1050
Target Start/End: Original strand, 25474874 - 25475190
Alignment:
| Q |
734 |
tacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggt |
833 |
Q |
| |
|
|||||| ||||||||||| || ||||||| | || |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| |
|
|
| T |
25474874 |
tacaaatgaaaataactataccctgtttgctctaagaaccaaagtcttgattttgattagcgacttaataacatctgccatattaattcttgctttaggt |
25474973 |
T |
|
| Q |
834 |
gaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatcca |
933 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||| |||| ||||||||| | ||||||||| |||||| || ||||||||||||||||||||| |
|
|
| T |
25474974 |
aaatcttcacaacaactgagggctaaaccaaaaatagatgttatgttagtcaatatgtcatcaatttgttccccatttttttggactaaatttgaatcca |
25475073 |
T |
|
| Q |
934 |
tgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagat |
1033 |
Q |
| |
|
|||| || ||||| |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25475074 |
tgacttctataattgaattaggcaatgatccattgatccatgtcttcaattttagttctgcaacaaacatatcatctgttggcttttttcttgttaagat |
25475173 |
T |
|
| Q |
1034 |
ttccattagcataatcc |
1050 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
25475174 |
ttccattagcataatcc |
25475190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 734 - 1050
Target Start/End: Original strand, 25569505 - 25569821
Alignment:
| Q |
734 |
tacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggt |
833 |
Q |
| |
|
|||||| |||||||||||||| || |||| | || || |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
25569505 |
tacaaatgaaaataactagaccctgcttgcgctaagaatcaaagtcttgattttgattaacgacgcaataacatctgcaatattaattcttgcttcaggt |
25569604 |
T |
|
| Q |
834 |
gaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatcca |
933 |
Q |
| |
|
|||||||| |||||| |||||||||||| ||||||||||||||||| | ||||||| | ||||||||| |||||| || |||||||||||||||||||| |
|
|
| T |
25569605 |
gaatcttcgcaacaattcagggctaaaccaaaaatagatgacatgtaaatcaatatgtcatcaatttgttccccaatttgttggactaaatttgaatcca |
25569704 |
T |
|
| Q |
934 |
tgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagat |
1033 |
Q |
| |
|
|||||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
25569705 |
agacctccataattgaatttggcaatgattcactgatccatgtcttcaaacttagttctgcaacaaatatatcatctgttggctttcttcttgtgaagat |
25569804 |
T |
|
| Q |
1034 |
ttccattagcataatcc |
1050 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
25569805 |
ttccattagcataatcc |
25569821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 735 - 1050
Target Start/End: Original strand, 25452591 - 25452906
Alignment:
| Q |
735 |
acaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtg |
834 |
Q |
| |
|
||||| |||| ||||||||| || |||| | || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
25452591 |
acaaatgaaactaactagaccctgcttgcgctaagaaccaaagtcttgattttgattagcgacgcaataacatctgcaatattaattcttgcttcaggtg |
25452690 |
T |
|
| Q |
835 |
aatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccat |
934 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| | ||||||||| |||||| || |||||||||||||||||||| |
|
|
| T |
25452691 |
aatcttcacaacaattcagggctaaaccaaaaatagatgacatgtaagtcaatatgtcatcaatttgttccccaatttgttggactaaatttgaatccaa |
25452790 |
T |
|
| Q |
935 |
gacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatt |
1034 |
Q |
| |
|
|| ||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
25452791 |
gatctccataattgaattaggaaatgatccactgatccatgtcttcaggcttagttctggaacaaacatatcatctgttggctttcttcttgtaaagatt |
25452890 |
T |
|
| Q |
1035 |
tccattagcataatcc |
1050 |
Q |
| |
|
||||||| ||| |||| |
|
|
| T |
25452891 |
tccattaacatgatcc |
25452906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 734 - 1050
Target Start/End: Original strand, 25340598 - 25340914
Alignment:
| Q |
734 |
tacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggt |
833 |
Q |
| |
|
|||||| |||||||||||||| || |||| | || || |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
25340598 |
tacaaatgaaaataactagaccctgcttgcgctaagaatcaaagtcttgattttgattaacgacgcaataacatctgcaatattaattcttgcttcaggt |
25340697 |
T |
|
| Q |
834 |
gaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatcca |
933 |
Q |
| |
|
|||||||| ||||| |||||||||||| ||||||||||||||||| | ||||||| | ||||||||| || ||| || |||||||||||||||||||| |
|
|
| T |
25340698 |
gaatcttctcaacatttcagggctaaaccaaaaatagatgacatgtaattcaatatgtcatcaatttgttctccaatttgttggactaaatttgaatcca |
25340797 |
T |
|
| Q |
934 |
tgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagat |
1033 |
Q |
| |
|
|||||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
25340798 |
agacctccataattgaattaggaaatgatccactgatccatgtcttcaagtttagttcagcaacaaacatatcatctgttggctttcttcttgtgaagat |
25340897 |
T |
|
| Q |
1034 |
ttccattagcataatcc |
1050 |
Q |
| |
|
|||||||| ||| |||| |
|
|
| T |
25340898 |
ttccattaacatgatcc |
25340914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 761 - 1050
Target Start/End: Original strand, 23257562 - 23257851
Alignment:
| Q |
761 |
tgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatcttcacaacaactcagggctaaa |
860 |
Q |
| |
|
|||||||| || |||||||||||||||||| || |||||||||||||||| |||||| ||||||| ||||| |||| ||| |||||| |||||||||| |
|
|
| T |
23257562 |
tgcaccaataaacaaagtcttgattttgatgagtgacgcaataacatctgtcatattaattcttgattcagaagaatattcgcaacaatgcagggctaaa |
23257661 |
T |
|
| Q |
861 |
ctaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctccataatggaattaggcaatg |
960 |
Q |
| |
|
| |||||||||||||||||||||||| |||| ||||| ||| |||||| | |||||||||||| ||||| | |||||||||||| ||||||||||||| |
|
|
| T |
23257662 |
ccaaaaatagatgacatgtgagtcaaaatatcatcaagttgttccccaaattgttggactaaattagaatctaagacctccataattgaattaggcaatg |
23257761 |
T |
|
| Q |
961 |
atcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
||| | ||||||||||||||| ||||||||| |||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
23257762 |
atccatcgatccatgtcttcaaacttagttcttcaacgaacatatcatctgttggctttctccttgtgaagatttccattagcataatcc |
23257851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 742 - 1050
Target Start/End: Complemental strand, 22901593 - 22901285
Alignment:
| Q |
742 |
aaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatcttc |
841 |
Q |
| |
|
||||||||||||| ||||| || ||| ||||| ||||||||||||||||||| | ||||||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
22901593 |
aaaataactagaccatgttttcatcaagaaccatagtcttgattttgattagcatcttgataacatcttccatattaattctttcttcaggtgaatcttt |
22901494 |
T |
|
| Q |
842 |
acaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctcc |
941 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||| | ||||||| | |||||||| ||||| || ||||||||| | ||||||| ||| ||| |
|
|
| T |
22901493 |
gcaacaattcagggctaaaccaaaaatagatgacatgcaactcaatatgtcatcaattttccccccattttgttggactaacctagaatccaagacatcc |
22901394 |
T |
|
| Q |
942 |
ataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccatta |
1041 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||| |||| ||| | |||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
22901393 |
ataattgaattaggcaatgattcactgatccatgtcttcaaagttaggtcttctacaaacatatcatctgttggctttcttcttgtaaagatttccatta |
22901294 |
T |
|
| Q |
1042 |
gcataatcc |
1050 |
Q |
| |
|
||||||||| |
|
|
| T |
22901293 |
gcataatcc |
22901285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 741 - 884
Target Start/End: Complemental strand, 24885712 - 24885569
Alignment:
| Q |
741 |
gaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatctt |
840 |
Q |
| |
|
|||||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24885712 |
gaaaataactagaccctgtttgcgccaagaaccaaagccttgattttgattagcgacgcaataacatctgccgtattgattcttgcttcaggtgaatctt |
24885613 |
T |
|
| Q |
841 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtc |
884 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24885612 |
cacaacaactcagggctaaactaaaaatagatgacatgtgagtc |
24885569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 25385212 - 25385413
Alignment:
| Q |
1 |
atagtaacttatactgttcttgtctcatcaaacagattttaagataaattctcagccaaaactgaaaaaccagcaattatgtagaaactagaatcgtcca |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||| | |||| |||||| |||| |
|
|
| T |
25385212 |
atagaaacttatactgttcttgtctcatcaaacagattttaagataaattcttagccaaaactgtaaaatcagtaattatgcaaaaaccagaatcatcca |
25385311 |
T |
|
| Q |
101 |
aaggtgaatggaccaacatgcatttgaaatttactttttatttgtgaatttttgtaaaaga--tgtcaagagacaaaagcagcaacaactattcatgata |
198 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | | ||| |||||||| ||||||||||| || ||||||| |
|
|
| T |
25385312 |
aaggtgaatggaccaccatgcatttgaaatttagtttttctttgtgaatttttgtaaaaaaaatttca-gagacaaaggcagcaacaacaatgcatgata |
25385410 |
T |
|
| Q |
199 |
tat |
201 |
Q |
| |
|
||| |
|
|
| T |
25385411 |
tat |
25385413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 505 - 672
Target Start/End: Original strand, 25322047 - 25322226
Alignment:
| Q |
505 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattc-------------tttaaaagcaaaaggaaata |
591 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25322047 |
gagaggggatacaa--taaatggatacagtacacacaatttacatgcttctgtgatgatccttattcactagtcgatttctttaaaagcaaaaggaaata |
25322144 |
T |
|
| Q |
592 |
tattaaggaaatagccaacttcattctcatacaacaatgaagaaagttgaaa-gacaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25322145 |
tattaaggagatagccaacttcattctcatacaacaatgaagacagttgaaaggacaaaccagaagtagcaagacatcaatc |
25322226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 24913915 - 24913747
Alignment:
| Q |
303 |
attatgtagcaacctagtaagtagac-----accacctgatatgacataaaagacagaaatattcaaccaaaaactgattggaaagttcagtaatagaag |
397 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
24913915 |
attatgtagcaacctagtaagtagactagacaccacctgctataacataaaagacagaaatattcaaccaaaaactgattagaaagttcagtaatagaag |
24913816 |
T |
|
| Q |
398 |
atattttcttcccattcttacacaatgag----tcaagactctcactactctcctccaaatactgcacc |
462 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||| |
|
|
| T |
24913815 |
atcttttcttcccattcttacacaatgagtcaatcaagacgctcactactttcctccaaagactgcacc |
24913747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 303 - 462
Target Start/End: Original strand, 25646202 - 25646369
Alignment:
| Q |
303 |
attatgtagcaacctagtaagtaga-----caccacctgatatgacataaaagacagaaatattcaaccaaaaactgattggaaagttcagtaatagaag |
397 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |
|
|
| T |
25646202 |
attatgtagcaacctagtaagtagactagacaccacctgctataacataaaagacagaaatattcaactaaaaactgattagaaggttcagtaatagaag |
25646301 |
T |
|
| Q |
398 |
atattttcttcccattcttacacaatgagtcaagactctcactac---tctcctccaaatactgcacc |
462 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||| |
|
|
| T |
25646302 |
atcttttcttcccattcttacacaatgagtcaagacccttactactattctcctccaaagactgcacc |
25646369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 521 - 672
Target Start/End: Original strand, 25799658 - 25799823
Alignment:
| Q |
521 |
taaatggatacagtacacacgatttacatgcttctgtgatgatccttattc-------------tttaaaagcaaaaggaaatatattaaggaaatagcc |
607 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
25799658 |
taaatggatacagtacacaccatttacatgcttctgtgatcatccttattcactagtcgatttctttaaaagcaaaagaaaatatgttaaggaaatagcc |
25799757 |
T |
|
| Q |
608 |
aacttcattctcatacaacaatgaagaaagttgaaa-gacaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
25799758 |
aacttcattctcatacaacaatgaagacagttgaaaggacaaacaagaagtagcaagacatcaatc |
25799823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 338 - 462
Target Start/End: Original strand, 25603826 - 25603951
Alignment:
| Q |
338 |
tatgacataaaagacagaaatattcaaccaaaa-actgattggaaagttcagtaatagaagatattttcttcccattcttacacaatgagtcaagactct |
436 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| || |
|
|
| T |
25603826 |
tatgacaaaaaaggcagaaatattcaaccaaaaaactgattagaaagttcagtaatataagatcttttcttcccattcgtacacaatgagtcaagaccct |
25603925 |
T |
|
| Q |
437 |
cactactctcctccaaatactgcacc |
462 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
25603926 |
cactactctcctccaaagactgcacc |
25603951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 25603162 - 25603397
Alignment:
| Q |
6 |
aacttatactgttcttgtctcatcaaacagattttaagataaattctcagccaaaactgaaaaaccagcaattatgtagaaactagaatcgtccaaaggt |
105 |
Q |
| |
|
||||||||| ||||||| ||||||||| |||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||| |||||| ||| |
|
|
| T |
25603162 |
aacttatacaattcttgtttcatcaaaccaattttaagatgaattctcaaccaaaactgaaaaacctgcaattatgcagaaactagaatagtccaatggt |
25603261 |
T |
|
| Q |
106 |
gaatggaccaacatgcatttgaaatttact----------ttttatttgtgaatttttgtaaaagatgtcaagagacaaaagcagcaacaactattcatg |
195 |
Q |
| |
|
||||||||||| ||||||| ||||||| | |||||| | ||||||||||||| |||||| |||||||| || | |||||| || |||| |
|
|
| T |
25603262 |
gaatggaccaatatgcattacaaatttagtgaatttggacatttattagcgaatttttgtaaacgatgtc-ggagacaaaggccggaacaacaatgcatg |
25603360 |
T |
|
| Q |
196 |
atatatcatcaaagagtttaattactggaagcaattg |
232 |
Q |
| |
|
|||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
25603361 |
atatatcatcttagagtttaattactagaagaaattg |
25603397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 505 - 672
Target Start/End: Original strand, 25646412 - 25646578
Alignment:
| Q |
505 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattctttaaaagcaaaaggaaatatattaaggaaata |
604 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||||||||||| ||||| |
|
|
| T |
25646412 |
gagaggggatacaacataaatggatatagtacacacgatttacatgcttttgtgatgatccttattcacttgtagc--aagaaaatatattaagaaaata |
25646509 |
T |
|
| Q |
605 |
gccaacttcattctcatacaacaatgaagaaagttgaaa-gacaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25646510 |
atgtacttccatctcatacaacaacgaagacggttgaaaggacaaaccagaagtagcaagacatcaatc |
25646578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 365 - 462
Target Start/End: Original strand, 25799543 - 25799640
Alignment:
| Q |
365 |
ccaaaaactgattggaaagttcagtaatagaagatattttcttcccattcttacacaatgagtcaagactctcactactctcctccaaatactgcacc |
462 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
25799543 |
ccaaaaactgattacaaagttcagtaatagaagatcttttcttcccattcttacacaatgattcaagaccctcactactctcctccaaagactgcacc |
25799640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 505 - 607
Target Start/End: Original strand, 25694742 - 25694857
Alignment:
| Q |
505 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatcctta-------------ttctttaaaagcaaaaggaaata |
591 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25694742 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattcactagtcgatttctttaaaagcaaaaggaaata |
25694841 |
T |
|
| Q |
592 |
tattaaggaaatagcc |
607 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
25694842 |
tattaaggaaatagcc |
25694857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 505 - 672
Target Start/End: Complemental strand, 24913706 - 24913540
Alignment:
| Q |
505 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattctttaaaagcaaaaggaaatatattaaggaaata |
604 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||| ||| ||| |||||||||||| ||||| |
|
|
| T |
24913706 |
gagaggggatacaacataaatggatagagtacacacgatttacatgcttttgtaatgatccttattcacctgtagc--aagaaaatatattaagaaaata |
24913609 |
T |
|
| Q |
605 |
gccaacttcattctcatacaacaatgaagaaagttgaaa-gacaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
24913608 |
atgtacttcattctcatacaacaacaaagactgttgaaaggacaaacaggaagtagcaagacatcaatc |
24913540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 25321934 - 25322004
Alignment:
| Q |
392 |
tagaagatattttcttcccattcttacacaatgagtcaagactctcactactctcctccaaatactgcacc |
462 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
25321934 |
tagaagatcttttcttcccattcttacacaatgagtcaagaccctcactactctcctccaaagactgcacc |
25322004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 25489590 - 25489656
Alignment:
| Q |
505 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattc |
571 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25489590 |
gagaggggatacaacataaatggatacaatacacacgatttacatgcttctgtgttgatccttattc |
25489656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 759 - 951
Target Start/End: Original strand, 29429157 - 29429348
Alignment:
| Q |
759 |
tttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatcttcacaacaactcagggcta |
858 |
Q |
| |
|
|||||| ||| || |||||||||||||||||||||| || |||||||||| ||||||| ||||||| || ||| ||| |||||||||| ||||| ||| |
|
|
| T |
29429157 |
tttgcatcaagaaacaaagtcttgattttgattagc-acccaataacatccaccatattaattcttgttttaggcgaacattcacaacaattcaggacta |
29429255 |
T |
|
| Q |
859 |
aactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctccataatggaat |
951 |
Q |
| |
|
||| ||||||||| | ||||| |||||||| | ||||||||| |||||| | ||||||| |||| || || | |||||||||||| |||| |
|
|
| T |
29429256 |
aaccaaaaatagaaggcatgtatgtcaatatgtcatcaatttgttccccattctgttggactcaattagagtctaagacctccataattgaat |
29429348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 25799465 - 25799547
Alignment:
| Q |
20 |
ttgtctcatcaaacagattttaagataaattctcagccaaaactgaaaaaccagcaattatgtagaaactagaatcgtccaaa |
102 |
Q |
| |
|
|||||||||| ||| |||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
25799465 |
ttgtctcatctaactgattttaagatacattctcagcaaaaactgaaaaatcagcaattatgcagaaactagaatcatccaaa |
25799547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 25321366 - 25321426
Alignment:
| Q |
85 |
aaactagaatcgtccaaaggtgaatggaccaacatgcatttgaaatttactttttatttgt |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25321366 |
aaactagaatcatccaaaggtgaatggaccaacatgcatttgaaatttagtttttatttgt |
25321426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 25604000 - 25604066
Alignment:
| Q |
505 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattc |
571 |
Q |
| |
|
||||||| |||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25604000 |
gagagggtatacaatatatatggatatagtacacacgatttacatgcttctgtgatgatccttattc |
25604066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 411
Target Start/End: Original strand, 25569119 - 25569214
Alignment:
| Q |
316 |
ctagtaagtagacaccacctgatatgacataaaagacagaaatattcaaccaaaaactgattggaaagttcagtaatagaagatattttcttccca |
411 |
Q |
| |
|
||||||| ||||||||||||| ||||||| | |||| | |||||| |||| ||||| ||||| | ||||||||||||||||||| ||||| ||||| |
|
|
| T |
25569119 |
ctagtaactagacaccacctggtatgacagagaagaaataaatatgcaacaaaaaaatgattagcaagttcagtaatagaagatcttttcatccca |
25569214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 569 - 607
Target Start/End: Original strand, 25385557 - 25385595
Alignment:
| Q |
569 |
ttctttaaaagcaaaaggaaatatattaaggaaatagcc |
607 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25385557 |
ttctttaaaagcaaaaggaaatatattaaggaaatagcc |
25385595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 584 - 672
Target Start/End: Original strand, 25569322 - 25569411
Alignment:
| Q |
584 |
aggaaatatattaaggaaatagccaacttcattctcatacaacaatgaagaaagttgaaag-acaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
||||||||||||||| |||| | |||||| ||||| ||||| ||||||||| ||||||| |||||||||||| |||||||||| |||| |
|
|
| T |
25569322 |
aggaaatatattaagaaaatggtgtacttcaatctcaaacaacgatgaagaaaattgaaagaacaaaccagaagaagcaagacataaatc |
25569411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 403 - 462
Target Start/End: Original strand, 25694637 - 25694699
Alignment:
| Q |
403 |
ttcttcccattcttacacaatgagtcaagactctcactac---tctcctccaaatactgcacc |
462 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||| |
|
|
| T |
25694637 |
ttcttcccattcttacacaatgagtcaagacccttactactattctcctccaaagactgcacc |
25694699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 25321889 - 25321934
Alignment:
| Q |
332 |
acctgatatgacataaaagacagaaatattcaaccaaaaactgatt |
377 |
Q |
| |
|
||||| ||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
25321889 |
acctgctatgacataaaaggcagatatattcaaccaaaaactgatt |
25321934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 672
Target Start/End: Original strand, 25452507 - 25452564
Alignment:
| Q |
616 |
tctcatacaacaatgaagaaagttgaaag-acaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
||||||||||| ||||||||| ||||| | |||||||||||| |||||||||| |||| |
|
|
| T |
25452507 |
tctcatacaacgatgaagaaaattgaatggacaaaccagaagaagcaagacattaatc |
25452564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 628 - 672
Target Start/End: Original strand, 25489691 - 25489736
Alignment:
| Q |
628 |
atgaagaaagttgaaag-acaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
||||||| ||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
25489691 |
atgaagacagttgaaaggacaaacaagaagtagcaagacatcaatc |
25489736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 284; Significance: 1e-158; HSPs: 4)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 284; E-Value: 1e-158
Query Start/End: Original strand, 723 - 1050
Target Start/End: Complemental strand, 17531 - 17204
Alignment:
| Q |
723 |
ttacatcagtttacaaacgaaaataactagactgtgtttgcaccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattc |
822 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
17531 |
ttacatcagtttacaaatgaaaataactagactgtgtttgcgccaacaaccaaagtcttgattttgattagcgtcgcaataacatctgccatattgattc |
17432 |
T |
|
| Q |
823 |
ttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaa |
922 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17431 |
ttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatgacatgtgagtcgatatatcatcaatttggtccccagttatttggactaa |
17332 |
T |
|
| Q |
923 |
atttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttttt |
1022 |
Q |
| |
|
||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
17331 |
atttgaatccaagagctccataattgaattaggcaatgatccactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggctttctt |
17232 |
T |
|
| Q |
1023 |
cttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
||||| |||||||||||||||||||||| |
|
|
| T |
17231 |
cttgtaaagatttccattagcataatcc |
17204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 303 - 462
Target Start/End: Complemental strand, 17951 - 17790
Alignment:
| Q |
303 |
attatgtagcaacctagtaagtagacaccacctgatatgacataaaagacagaaatattcaaccaaaaactgattggaaagttcagtaatagaagatatt |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| | ||||||||||||||| ||||||||||||||||| || || |
|
|
| T |
17951 |
attatgtagcaacctagtaagtagacaccacctgctataacataaaagacaaaaataattaaccaaaaactgattagaaagttcagtaataga--atctt |
17854 |
T |
|
| Q |
403 |
ttcttcccattcttacacaatgag----tcaagactctcactactctcctccaaatactgcacc |
462 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
17853 |
ttcttcccattcttacacaatgagtcaatcaagaccctcactactttcctccaaggactgcacc |
17790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #3
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 505 - 672
Target Start/End: Complemental strand, 17749 - 17583
Alignment:
| Q |
505 |
gagaggggatacaacataaatggatacagtacacacgatttacatgcttctgtgatgatccttattctttaaaagcaaaaggaaatatattaaggaaata |
604 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| ||| |||||||||||| ||||| |
|
|
| T |
17749 |
gagaggggatacaacataaatggatacagtacacacgatttacatgtttttgtaatgatccttattcacttgtagc--aagaaaatatattaagaaaata |
17652 |
T |
|
| Q |
605 |
gccaacttcattctcatacaacaatgaagaaagttgaaa-gacaaaccagaagtagcaagacatcaatc |
672 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
17651 |
atgtacttcattctcatacaacaacgaagacagttgaaaggacaaacaggaagtagcaagacatcaatc |
17583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 18539 - 18458
Alignment:
| Q |
63 |
tgaaaaaccagcaattatgtagaaactagaatcgtccaaaggtgaatggaccaacatgcatttgaaatttactttttatttgt |
145 |
Q |
| |
|
||||||| ||||||||||| | |||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
18539 |
tgaaaaatcagcaattatgca-aaactaaaatcatccaaaggtgaatggaccaacatgcatttgaaatttagtttttctttgt |
18458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 188; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 765 - 1050
Target Start/End: Original strand, 10323500 - 10323782
Alignment:
| Q |
765 |
ccaacaaccaaagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatcttcacaacaactcagggctaaactaa |
864 |
Q |
| |
|
|||| |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
10323500 |
ccaagaaccaaagtctttattttgattagagacgcaataacatcttccatattgattcttgcttcaggtgaatcttcacaacaattcagggataaactaa |
10323599 |
T |
|
| Q |
865 |
aaatagatgacatgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctccataatggaattaggcaatgatcg |
964 |
Q |
| |
|
||||||||||||||||| | ||| || |||||| |||||| ||| |||||||||||| ||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
10323600 |
aaatagatgacatgtgaaacgatagat---caatttcatccccatttagttggactaaattagaatccaagacctccataattgcattaggcaatgatcc |
10323696 |
T |
|
| Q |
965 |
actgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10323697 |
actgatccatgtcttcaagcttagttctgcagcaaacatatcatctgttggctttcttcttgtgaagatttccattagcataatcc |
10323782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0830 (Bit Score: 152; Significance: 6e-80; HSPs: 1)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 775 - 1050
Target Start/End: Complemental strand, 4929 - 4654
Alignment:
| Q |
775 |
aagtcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatcttcacaacaactcagggctaaactaaaaatagatga |
874 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||| ||| |||||| ||| ||||||| |||||||||||| |
|
|
| T |
4929 |
aagtcttgatttttattagcgacgcaataacatctgtcatattaattcttgcttccggtgaatattcgcaacaattcaaagctaaaccaaaaatagatga |
4830 |
T |
|
| Q |
875 |
catgtgagtcaatatataatcaatttggtccccagttatttggactaaatttgaatccatgacctccataatggaattaggcaatgatcgactgatccat |
974 |
Q |
| |
|
||| ||| ||||||||| |||| ||| ||| || || |||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||| |
|
|
| T |
4829 |
catatgaatcaatatatcatcagtttcttcctcaatttgttggactaaatttgaatccaagaccttcataattgaattaggcaatgattcattgatccat |
4730 |
T |
|
| Q |
975 |
gtcttcaagcttagttctgcaacaaacatatcatctgttggcttttttcttgtgaagatttccattagcataatcc |
1050 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
4729 |
gatttcaaacttagttctgcaacaaacatatcatctgttggctttcttctggtgaagatttccattagcataatcc |
4654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.00000000003; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 917 - 1045
Target Start/End: Complemental strand, 16886915 - 16886787
Alignment:
| Q |
917 |
gactaaatttgaatccatgacctccataatggaattaggcaatgatcgactgatccatgtcttcaagcttagttctgcaacaaacatatcatctgttggc |
1016 |
Q |
| |
|
||||||||| |||||| || ||||||| |||||||||| ||| ||| |||||||| || ||| ||| |||| |||||||| |||| ||||||| |
|
|
| T |
16886915 |
gactaaattgtaatccacaacttccataactgaattaggcattgactcactaatccatgtttttaaggttaattcttgtacaaacatttcatttgttggc |
16886816 |
T |
|
| Q |
1017 |
ttttttcttgtgaagatttccattagcat |
1045 |
Q |
| |
|
|| |||| ||||||||||||||||||||| |
|
|
| T |
16886815 |
ttctttcctgtgaagatttccattagcat |
16886787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 778 - 852
Target Start/End: Complemental strand, 16887054 - 16886980
Alignment:
| Q |
778 |
tcttgattttgattagcgacgcaataacatctgccatattgattcttgcttcaggtgaatcttcacaacaactca |
852 |
Q |
| |
|
|||||||||||||||| || ||| | |||||||||||| | || |||||||| ||||||||| ||||||| |||| |
|
|
| T |
16887054 |
tcttgattttgattagtgatgcagttacatctgccatactaatccttgcttctggtgaatctgcacaacatctca |
16886980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 306 - 351
Target Start/End: Complemental strand, 11971279 - 11971234
Alignment:
| Q |
306 |
atgtagcaacctagtaagtagacaccacctgatatgacataaaaga |
351 |
Q |
| |
|
||||||||| |||||||||||||||||| || ||||||| |||||| |
|
|
| T |
11971279 |
atgtagcaaactagtaagtagacaccacatggtatgacacaaaaga |
11971234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 997 - 1045
Target Start/End: Original strand, 5079719 - 5079767
Alignment:
| Q |
997 |
caaacatatcatctgttggcttttttcttgtgaagatttccattagcat |
1045 |
Q |
| |
|
||||||| |||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
5079719 |
caaacatttcatctgttggcttctttcctgtgaagatttccattagcat |
5079767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0526 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0526
Description:
Target: scaffold0526; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 306 - 351
Target Start/End: Complemental strand, 11191 - 11146
Alignment:
| Q |
306 |
atgtagcaacctagtaagtagacaccacctgatatgacataaaaga |
351 |
Q |
| |
|
||||||||| |||||||||||||||||| || ||||||| |||||| |
|
|
| T |
11191 |
atgtagcaaactagtaagtagacaccacatggtatgacacaaaaga |
11146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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