View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16375_high_7 (Length: 318)
Name: NF16375_high_7
Description: NF16375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16375_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 14 - 304
Target Start/End: Original strand, 36458833 - 36459123
Alignment:
| Q |
14 |
catcagtgagagtaagacctagttgaatcaacttgagattatccacgttagccttcaagaaactgtactgttctgatggatccatatggcggaggtgata |
113 |
Q |
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| T |
36458833 |
catcagtgagagtaagacctagttgaatcaagttgagattatccacgttagccttcaagaaactgtactgttctgatggatccatatggcggaggtgata |
36458932 |
T |
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| Q |
114 |
cggtatattgggatcaaagttaggtgcaacgacgacaccaggaaactcggtatccattgatacatagggaaacatgtgaacgaaatttcttataagatca |
213 |
Q |
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| T |
36458933 |
cggtatattgggatcaaagttaggtgcaacgacgacaccaggaaactcggtatccattgatacatagggaaacatgtgaacgaaatctcttataagatca |
36459032 |
T |
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| Q |
214 |
aattcacgcttcagattttcagcccacacctgacgaatcttaataggtttagttgaagcatctttctccttcactttggtcatgatgatgg |
304 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |
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| T |
36459033 |
aattcacgctccagattttcagcccacacctgacgaatcttaataggtttatttgaagcatcctcctccttcactttggtcatgatgatgg |
36459123 |
T |
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