View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16375_low_14 (Length: 210)
Name: NF16375_low_14
Description: NF16375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16375_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 7723821 - 7724008
Alignment:
| Q |
1 |
acaacaacaacaactcatggtacgtacaaccacagaaccagaagatgcagtgtttctctccagcaatgactaacgagttccgtttcattgatgaaaccaa |
100 |
Q |
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| T |
7723821 |
acaacaacaacaactcatggtacgtacaaccacagaaccagaagatgcagtgtttctctccggcaattactaacgagttccgtttcattgatgaaaccaa |
7723920 |
T |
|
| Q |
101 |
tcatgattctgaaaatggcattccatttctctcttggagactctgatagaacaagcctcgttcatgaaaaatattaataataatgtta |
188 |
Q |
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| T |
7723921 |
tcatgattctgaaaatggcattccatttctctcttggagactctgatagaacaagcctcgttcatgaaaaatattaataataatgtta |
7724008 |
T |
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