View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16376_high_3 (Length: 344)

Name: NF16376_high_3
Description: NF16376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16376_high_3
NF16376_high_3
[»] chr7 (60 HSPs)
chr7 (12-308)||(11890907-11891190)
chr7 (180-317)||(5409815-5409952)
chr7 (181-317)||(9778452-9778580)
chr7 (180-317)||(13770634-13770771)
chr7 (181-317)||(1433398-1433534)
chr7 (181-281)||(25481846-25481946)
chr7 (191-302)||(24339596-24339707)
chr7 (245-317)||(32093999-32094072)
chr7 (186-282)||(42720904-42720994)
chr7 (245-317)||(43027448-43027520)
chr7 (228-283)||(11700794-11700849)
chr7 (181-280)||(30730981-30731080)
chr7 (183-281)||(11061091-11061189)
chr7 (228-302)||(26033455-26033529)
chr7 (237-302)||(7438706-7438771)
chr7 (237-306)||(16341496-16341565)
chr7 (232-288)||(11665448-11665504)
chr7 (186-281)||(26733253-26733348)
chr7 (232-283)||(29787382-29787433)
chr7 (245-283)||(2424622-2424660)
chr7 (244-302)||(9408328-9408386)
chr7 (245-302)||(18039006-18039064)
chr7 (228-278)||(19213794-19213844)
chr7 (245-306)||(18215176-18215237)
chr7 (232-301)||(22602705-22602774)
chr7 (245-281)||(3991332-3991368)
chr7 (245-301)||(7058434-7058490)
chr7 (178-301)||(7328686-7328803)
chr7 (232-316)||(7758317-7758401)
chr7 (239-283)||(12289116-12289160)
chr7 (245-281)||(13300418-13300454)
chr7 (245-317)||(15680817-15680884)
chr7 (245-293)||(19992009-19992057)
chr7 (181-300)||(27944991-27945104)
chr7 (232-280)||(32308115-32308163)
chr7 (247-306)||(5548686-5548745)
chr7 (235-282)||(18013088-18013135)
chr7 (245-280)||(35861972-35862007)
chr7 (236-282)||(8056959-8057004)
chr7 (247-302)||(11272580-11272637)
chr7 (245-283)||(14729709-14729747)
chr7 (248-302)||(17307904-17307958)
chr7 (180-282)||(17851374-17851476)
chr7 (244-282)||(38143230-38143268)
chr7 (245-282)||(1401033-1401070)
chr7 (243-301)||(2334254-2334314)
chr7 (237-282)||(10377507-10377552)
chr7 (245-282)||(15902830-15902867)
chr7 (245-282)||(20549799-20549836)
chr7 (245-282)||(22868050-22868087)
chr7 (232-281)||(23191891-23191940)
chr7 (246-282)||(3938152-3938188)
chr7 (245-277)||(8234154-8234186)
chr7 (245-281)||(11831440-11831476)
chr7 (238-282)||(12278836-12278880)
chr7 (210-282)||(19206023-19206095)
chr7 (245-281)||(21880160-21880196)
chr7 (232-279)||(22306526-22306574)
chr7 (245-281)||(30813820-30813856)
chr7 (232-288)||(43249988-43250044)
[»] chr1 (84 HSPs)
chr1 (182-317)||(1486688-1486823)
chr1 (181-282)||(398779-398880)
chr1 (181-301)||(6612166-6612286)
chr1 (232-301)||(113294-113363)
chr1 (180-300)||(24577182-24577290)
chr1 (226-282)||(40181860-40181916)
chr1 (181-281)||(41877485-41877585)
chr1 (181-281)||(42359464-42359564)
chr1 (233-279)||(12611962-12612008)
chr1 (232-317)||(19562599-19562685)
chr1 (181-299)||(25272426-25272544)
chr1 (237-282)||(1864894-1864939)
chr1 (244-281)||(40258948-40258985)
chr1 (245-302)||(47989505-47989562)
chr1 (182-281)||(3490405-3490498)
chr1 (255-307)||(35919265-35919317)
chr1 (245-317)||(37598840-37598906)
chr1 (245-300)||(1704988-1705043)
chr1 (231-282)||(5898280-5898331)
chr1 (245-301)||(5944289-5944347)
chr1 (179-282)||(7918225-7918328)
chr1 (246-281)||(18337338-18337373)
chr1 (247-302)||(44482240-44482295)
chr1 (184-282)||(9709767-9709865)
chr1 (232-282)||(13997878-13997928)
chr1 (243-317)||(15323169-15323243)
chr1 (232-282)||(36878456-36878506)
chr1 (181-281)||(38078676-38078771)
chr1 (182-279)||(9103585-9103682)
chr1 (181-226)||(10577805-10577850)
chr1 (245-282)||(16927199-16927236)
chr1 (237-282)||(19324562-19324607)
chr1 (232-281)||(22515902-22515951)
chr1 (181-281)||(22881631-22881725)
chr1 (238-283)||(25452161-25452206)
chr1 (234-279)||(30847737-30847782)
chr1 (245-282)||(34298444-34298481)
chr1 (232-317)||(46348367-46348447)
chr1 (181-277)||(2896140-2896236)
chr1 (244-280)||(9449024-9449060)
chr1 (245-301)||(9629895-9629951)
chr1 (232-280)||(12443476-12443524)
chr1 (245-281)||(18190123-18190159)
chr1 (245-281)||(23738686-23738722)
chr1 (245-281)||(31015051-31015087)
chr1 (245-281)||(31672910-31672946)
chr1 (245-316)||(32461438-32461514)
chr1 (239-307)||(34712372-34712440)
chr1 (181-220)||(609534-609573)
chr1 (245-300)||(6427358-6427413)
chr1 (245-283)||(9033020-9033059)
chr1 (245-280)||(9828052-9828087)
chr1 (247-282)||(25098569-25098604)
chr1 (247-282)||(25361896-25361931)
chr1 (247-293)||(2283676-2283722)
chr1 (232-282)||(13436453-13436503)
chr1 (240-282)||(23531792-23531834)
chr1 (232-282)||(28674795-28674845)
chr1 (232-301)||(5376495-5376564)
chr1 (232-281)||(5927355-5927404)
chr1 (245-282)||(10233261-10233298)
chr1 (245-282)||(14332656-14332693)
chr1 (245-282)||(16164329-16164366)
chr1 (245-282)||(17425107-17425144)
chr1 (245-278)||(17754319-17754352)
chr1 (245-306)||(20157340-20157401)
chr1 (212-281)||(21378553-21378622)
chr1 (245-282)||(22794092-22794129)
chr1 (245-278)||(23653007-23653040)
chr1 (237-282)||(34257924-34257969)
chr1 (230-299)||(34371707-34371775)
chr1 (181-226)||(41597540-41597585)
chr1 (245-281)||(51410032-51410069)
chr1 (181-226)||(52284654-52284699)
chr1 (245-281)||(1815265-1815301)
chr1 (245-281)||(6332679-6332714)
chr1 (245-281)||(10572604-10572640)
chr1 (245-281)||(11605950-11605986)
chr1 (184-224)||(26830542-26830582)
chr1 (245-281)||(27471581-27471617)
chr1 (245-281)||(28273103-28273139)
chr1 (245-302)||(31694704-31694763)
chr1 (245-281)||(32434731-32434767)
chr1 (245-281)||(48450602-48450638)
[»] scaffold0027 (1 HSPs)
scaffold0027 (181-281)||(46626-46726)
[»] chr6 (76 HSPs)
chr6 (181-302)||(9107364-9107485)
chr6 (182-302)||(16766642-16766762)
chr6 (181-293)||(7938060-7938172)
chr6 (181-281)||(8776988-8777088)
chr6 (232-316)||(12696319-12696403)
chr6 (181-302)||(5970102-5970217)
chr6 (245-311)||(10770659-10770725)
chr6 (181-315)||(28715241-28715368)
chr6 (237-306)||(9025484-9025553)
chr6 (181-306)||(9027122-9027247)
chr6 (181-281)||(426529-426629)
chr6 (232-288)||(17341672-17341728)
chr6 (245-316)||(34595142-34595208)
chr6 (181-302)||(8365513-8365628)
chr6 (232-317)||(3398614-3398698)
chr6 (238-283)||(31579238-31579283)
chr6 (181-281)||(1681702-1681802)
chr6 (246-282)||(16388247-16388283)
chr6 (245-281)||(31384928-31384964)
chr6 (234-282)||(32839660-32839708)
chr6 (232-316)||(33001274-33001353)
chr6 (235-282)||(5462684-5462731)
chr6 (178-281)||(7977845-7977948)
chr6 (237-302)||(8713979-8714045)
chr6 (181-283)||(8805585-8805687)
chr6 (196-282)||(9658839-9658924)
chr6 (232-282)||(19040347-19040397)
chr6 (232-282)||(26562684-26562734)
chr6 (232-282)||(32320683-32320733)
chr6 (235-293)||(32511669-32511727)
chr6 (245-283)||(34225822-34225860)
chr6 (245-282)||(7151420-7151457)
chr6 (245-282)||(7265607-7265644)
chr6 (237-282)||(7996392-7996437)
chr6 (237-282)||(8022364-8022409)
chr6 (245-302)||(9522899-9522956)
chr6 (251-316)||(17327635-17327700)
chr6 (232-281)||(17841604-17841653)
chr6 (245-305)||(2117084-2117143)
chr6 (239-307)||(7086797-7086865)
chr6 (245-281)||(7801171-7801207)
chr6 (245-281)||(16833316-16833352)
chr6 (180-302)||(18367780-18367901)
chr6 (245-317)||(28152107-28152173)
chr6 (245-281)||(31959167-31959203)
chr6 (196-279)||(6389702-6389785)
chr6 (232-279)||(10842527-10842574)
chr6 (231-282)||(21924949-21925000)
chr6 (237-316)||(24138426-24138505)
chr6 (247-293)||(1700362-1700408)
chr6 (243-281)||(4118348-4118386)
chr6 (232-282)||(5732524-5732574)
chr6 (245-279)||(12627594-12627628)
chr6 (248-282)||(13360386-13360420)
chr6 (245-278)||(403882-403915)
chr6 (245-282)||(1532248-1532285)
chr6 (181-226)||(2386771-2386816)
chr6 (244-281)||(6349752-6349789)
chr6 (245-282)||(7569182-7569219)
chr6 (245-282)||(9617442-9617479)
chr6 (181-282)||(9629328-9629428)
chr6 (249-282)||(11591884-11591917)
chr6 (236-281)||(25038086-25038131)
chr6 (245-282)||(30866158-30866195)
chr6 (245-282)||(34073361-34073398)
chr6 (245-281)||(853874-853910)
chr6 (245-281)||(1191715-1191751)
chr6 (245-281)||(2224234-2224270)
chr6 (247-282)||(7027251-7027287)
chr6 (244-280)||(7930312-7930348)
chr6 (245-300)||(9911524-9911580)
chr6 (245-281)||(17435207-17435243)
chr6 (245-301)||(20576628-20576684)
chr6 (245-273)||(25010225-25010253)
chr6 (246-282)||(26314648-26314684)
chr6 (235-279)||(34446563-34446607)
[»] chr3 (72 HSPs)
chr3 (180-281)||(15796309-15796410)
chr3 (245-307)||(25948876-25948938)
chr3 (181-278)||(3164043-3164140)
chr3 (181-316)||(21479068-21479198)
chr3 (181-313)||(34307763-34307895)
chr3 (232-302)||(4987285-4987355)
chr3 (232-294)||(26508105-26508167)
chr3 (245-317)||(28918009-28918078)
chr3 (181-282)||(25093446-25093547)
chr3 (181-281)||(10268501-10268601)
chr3 (245-317)||(27505254-27505326)
chr3 (181-288)||(24205049-24205156)
chr3 (245-304)||(49651778-49651837)
chr3 (228-278)||(51206371-51206421)
chr3 (245-282)||(7928458-7928495)
chr3 (212-293)||(8383232-8383313)
chr3 (230-283)||(11251971-11252024)
chr3 (243-300)||(16789018-16789075)
chr3 (230-302)||(1509532-1509604)
chr3 (238-282)||(4201397-4201441)
chr3 (181-317)||(7171446-7171576)
chr3 (245-317)||(10954960-10955027)
chr3 (232-280)||(14979176-14979224)
chr3 (245-281)||(34910325-34910361)
chr3 (181-281)||(35994753-35994852)
chr3 (245-317)||(55401083-55401150)
chr3 (181-302)||(750612-750734)
chr3 (236-282)||(9624640-9624686)
chr3 (237-283)||(27277851-27277897)
chr3 (181-278)||(10335304-10335401)
chr3 (237-282)||(11313814-11313859)
chr3 (181-226)||(14027959-14028004)
chr3 (245-302)||(14209121-14209178)
chr3 (237-282)||(16192764-16192809)
chr3 (236-281)||(21257001-21257046)
chr3 (202-283)||(25064874-25064955)
chr3 (245-282)||(29508452-29508489)
chr3 (237-282)||(32804554-32804599)
chr3 (235-299)||(15314873-15314937)
chr3 (245-293)||(17005622-17005670)
chr3 (232-300)||(34185119-34185187)
chr3 (246-281)||(20503474-20503509)
chr3 (235-282)||(24633415-24633462)
chr3 (244-282)||(14840305-14840343)
chr3 (244-281)||(25775515-25775553)
chr3 (245-299)||(28812523-28812577)
chr3 (245-282)||(1550148-1550185)
chr3 (226-283)||(3618870-3618927)
chr3 (237-282)||(7614429-7614474)
chr3 (245-302)||(8039829-8039886)
chr3 (248-281)||(8587036-8587069)
chr3 (245-302)||(9800048-9800105)
chr3 (181-226)||(10318110-10318155)
chr3 (245-282)||(10690276-10690313)
chr3 (245-282)||(11493375-11493412)
chr3 (200-269)||(12674528-12674597)
chr3 (245-282)||(12704015-12704052)
chr3 (245-302)||(14832107-14832164)
chr3 (245-282)||(18426957-18426994)
chr3 (245-282)||(23870573-23870610)
chr3 (245-282)||(38731226-38731263)
chr3 (249-282)||(39002044-39002077)
chr3 (245-302)||(41961644-41961701)
chr3 (245-282)||(49505168-49505205)
chr3 (245-277)||(11610529-11610561)
chr3 (236-288)||(15544692-15544744)
chr3 (246-282)||(15812835-15812871)
chr3 (181-217)||(22774132-22774167)
chr3 (245-281)||(26492220-26492256)
chr3 (238-282)||(30994896-30994940)
chr3 (232-272)||(40052327-40052367)
chr3 (237-281)||(55212963-55213007)
[»] chr4 (55 HSPs)
chr4 (178-317)||(3947745-3947877)
chr4 (181-317)||(23292970-23293101)
chr4 (181-302)||(19482612-19482733)
chr4 (228-317)||(54580007-54580091)
chr4 (245-300)||(11596348-11596403)
chr4 (245-311)||(12895101-12895167)
chr4 (183-288)||(14126119-14126224)
chr4 (232-282)||(15029760-15029810)
chr4 (187-281)||(27706192-27706286)
chr4 (181-283)||(21873384-21873478)
chr4 (181-283)||(21929245-21929339)
chr4 (237-282)||(22440614-22440659)
chr4 (181-282)||(24343451-24343552)
chr4 (234-283)||(24999041-24999090)
chr4 (181-282)||(36635268-36635369)
chr4 (245-281)||(28964263-28964299)
chr4 (245-281)||(29205452-29205488)
chr4 (186-282)||(40179650-40179746)
chr4 (243-282)||(903928-903967)
chr4 (238-304)||(15659752-15659818)
chr4 (181-281)||(20633429-20633526)
chr4 (181-281)||(42640476-42640573)
chr4 (232-317)||(49431020-49431101)
chr4 (237-283)||(56257933-56257979)
chr4 (181-226)||(4157102-4157147)
chr4 (244-281)||(6485626-6485663)
chr4 (245-282)||(8423732-8423769)
chr4 (245-302)||(30982872-30982929)
chr4 (245-293)||(12895277-12895325)
chr4 (245-281)||(14465090-14465126)
chr4 (249-293)||(16189721-16189765)
chr4 (245-281)||(21945511-21945547)
chr4 (245-313)||(32273509-32273577)
chr4 (245-293)||(35157988-35158036)
chr4 (232-283)||(2234245-2234296)
chr4 (181-281)||(2361990-2362092)
chr4 (245-288)||(32910559-32910602)
chr4 (181-300)||(44081573-44081692)
chr4 (236-282)||(1213235-1213280)
chr4 (244-282)||(5775372-5775410)
chr4 (240-278)||(12077831-12077869)
chr4 (181-219)||(12708090-12708128)
chr4 (245-283)||(17425402-17425440)
chr4 (232-282)||(40613445-40613495)
chr4 (237-282)||(9996840-9996885)
chr4 (237-278)||(11931280-11931321)
chr4 (245-290)||(37203272-37203317)
chr4 (245-317)||(40481645-40481716)
chr4 (245-302)||(51701266-51701323)
chr4 (245-281)||(4383376-4383411)
chr4 (238-282)||(6863154-6863198)
chr4 (249-281)||(12224210-12224242)
chr4 (245-281)||(12797353-12797388)
chr4 (245-281)||(38847027-38847063)
chr4 (245-281)||(47263994-47264030)
[»] chr5 (59 HSPs)
chr5 (237-316)||(43001800-43001879)
chr5 (232-317)||(31084318-31084403)
chr5 (186-300)||(13287395-13287509)
chr5 (181-302)||(21522694-21522815)
chr5 (181-302)||(21533260-21533381)
chr5 (181-317)||(15382421-15382560)
chr5 (181-317)||(23015968-23016106)
chr5 (232-302)||(39698536-39698606)
chr5 (228-305)||(6471880-6471957)
chr5 (181-281)||(17177038-17177138)
chr5 (194-281)||(21191071-21191158)
chr5 (181-317)||(36642735-36642876)
chr5 (245-302)||(7677713-7677770)
chr5 (237-314)||(39205880-39205957)
chr5 (245-281)||(6247630-6247666)
chr5 (245-281)||(21576760-21576796)
chr5 (232-279)||(4344737-4344784)
chr5 (181-300)||(19579645-19579764)
chr5 (191-302)||(21541984-21542095)
chr5 (235-282)||(24273044-24273091)
chr5 (235-282)||(24389123-24389170)
chr5 (245-308)||(38749551-38749614)
chr5 (237-276)||(40000555-40000594)
chr5 (232-282)||(28588688-28588738)
chr5 (245-282)||(5467992-5468029)
chr5 (232-281)||(14674264-14674313)
chr5 (232-277)||(19552562-19552607)
chr5 (245-282)||(40131629-40131666)
chr5 (237-282)||(41091271-41091316)
chr5 (245-281)||(24906316-24906352)
chr5 (183-302)||(41995417-41995534)
chr5 (245-281)||(42893368-42893404)
chr5 (245-300)||(3966511-3966566)
chr5 (243-282)||(30098332-30098371)
chr5 (245-292)||(4105265-4105314)
chr5 (245-307)||(10298577-10298639)
chr5 (247-317)||(14873527-14873597)
chr5 (181-279)||(15410465-15410563)
chr5 (244-282)||(33035815-33035853)
chr5 (247-293)||(43564891-43564937)
chr5 (237-282)||(16203809-16203854)
chr5 (245-282)||(17593736-17593773)
chr5 (237-282)||(18421855-18421900)
chr5 (247-280)||(19438353-19438386)
chr5 (181-226)||(20683325-20683370)
chr5 (245-302)||(21351899-21351956)
chr5 (232-281)||(27932230-27932279)
chr5 (245-282)||(30502402-30502439)
chr5 (245-282)||(30542745-30542782)
chr5 (245-282)||(35017045-35017082)
chr5 (243-283)||(41794090-41794131)
chr5 (245-281)||(7218282-7218318)
chr5 (245-281)||(8420035-8420071)
chr5 (245-281)||(15405070-15405106)
chr5 (232-272)||(22611761-22611801)
chr5 (182-222)||(28862262-28862302)
chr5 (245-281)||(33178033-33178069)
chr5 (246-302)||(37328838-37328894)
chr5 (245-281)||(41633743-41633779)
[»] chr2 (62 HSPs)
chr2 (183-282)||(21616708-21616807)
chr2 (180-281)||(2438734-2438832)
chr2 (181-281)||(30335361-30335461)
chr2 (180-283)||(28412293-28412396)
chr2 (245-302)||(12668417-12668474)
chr2 (232-281)||(30404865-30404914)
chr2 (182-299)||(44860273-44860382)
chr2 (245-316)||(974755-974826)
chr2 (190-317)||(15972826-15972948)
chr2 (232-283)||(21782831-21782882)
chr2 (232-282)||(28677904-28677954)
chr2 (232-293)||(29176496-29176557)
chr2 (181-282)||(40361768-40361869)
chr2 (183-302)||(23058436-23058556)
chr2 (245-281)||(30717545-30717581)
chr2 (238-282)||(35449514-35449558)
chr2 (196-283)||(2331753-2331840)
chr2 (182-293)||(18276466-18276577)
chr2 (180-281)||(21374714-21374810)
chr2 (232-282)||(16069268-16069318)
chr2 (232-306)||(24894384-24894458)
chr2 (180-282)||(31283991-31284093)
chr2 (245-299)||(36756341-36756395)
chr2 (232-281)||(11223878-11223927)
chr2 (245-281)||(12940950-12940986)
chr2 (245-281)||(15657872-15657908)
chr2 (238-282)||(30527609-30527653)
chr2 (247-283)||(36409640-36409676)
chr2 (246-302)||(37419752-37419808)
chr2 (238-293)||(18420437-18420492)
chr2 (245-300)||(18622614-18622669)
chr2 (243-282)||(23921259-23921298)
chr2 (183-270)||(34337202-34337289)
chr2 (237-283)||(4332926-4332972)
chr2 (245-279)||(5473336-5473370)
chr2 (187-281)||(18421914-18422007)
chr2 (181-298)||(20539672-20539783)
chr2 (238-280)||(22084848-22084890)
chr2 (245-282)||(5367200-5367237)
chr2 (232-281)||(18841028-18841077)
chr2 (245-281)||(19536412-19536449)
chr2 (245-282)||(23718034-23718071)
chr2 (245-282)||(24105706-24105743)
chr2 (245-282)||(25846749-25846786)
chr2 (181-226)||(26769461-26769506)
chr2 (245-282)||(31808085-31808122)
chr2 (245-282)||(34691819-34691856)
chr2 (245-282)||(34714231-34714268)
chr2 (181-226)||(34785052-34785097)
chr2 (245-282)||(37411258-37411295)
chr2 (232-281)||(37558972-37559021)
chr2 (232-281)||(38117174-38117223)
chr2 (232-288)||(10535767-10535823)
chr2 (247-279)||(11308021-11308053)
chr2 (245-316)||(14996204-14996275)
chr2 (232-272)||(19959810-19959850)
chr2 (234-282)||(32199154-32199202)
chr2 (245-281)||(33153432-33153468)
chr2 (243-279)||(36281691-36281727)
chr2 (238-282)||(39279676-39279720)
chr2 (245-281)||(39323272-39323308)
chr2 (245-293)||(42832279-42832327)
[»] scaffold0021 (1 HSPs)
scaffold0021 (180-294)||(130425-130539)
[»] chr8 (63 HSPs)
chr8 (182-319)||(24857954-24858093)
chr8 (181-302)||(22651920-22652041)
chr8 (232-299)||(11927083-11927150)
chr8 (181-299)||(25566787-25566903)
chr8 (181-302)||(29510298-29510419)
chr8 (181-288)||(24413567-24413675)
chr8 (235-282)||(11803257-11803304)
chr8 (232-299)||(11944660-11944727)
chr8 (245-299)||(15816126-15816180)
chr8 (237-278)||(41831958-41831999)
chr8 (245-281)||(4948660-4948696)
chr8 (245-293)||(36450757-36450805)
chr8 (182-282)||(36934615-36934715)
chr8 (182-293)||(926791-926902)
chr8 (245-300)||(2572052-2572107)
chr8 (245-316)||(3025559-3025625)
chr8 (182-281)||(4673440-4673538)
chr8 (180-283)||(37283823-37283926)
chr8 (181-288)||(44067460-44067567)
chr8 (232-282)||(13844610-13844660)
chr8 (232-282)||(31236591-31236641)
chr8 (237-319)||(40332191-40332268)
chr8 (181-226)||(3951599-3951644)
chr8 (232-281)||(4298901-4298950)
chr8 (245-282)||(14134707-14134744)
chr8 (237-282)||(14731712-14731757)
chr8 (181-282)||(24362216-24362317)
chr8 (232-281)||(24669428-24669477)
chr8 (232-281)||(31556992-31557040)
chr8 (245-282)||(34897093-34897130)
chr8 (183-282)||(4786352-4786445)
chr8 (245-281)||(8342980-8343016)
chr8 (245-281)||(8343324-8343360)
chr8 (245-293)||(20679398-20679446)
chr8 (245-281)||(20873077-20873113)
chr8 (245-281)||(30077402-30077438)
chr8 (232-295)||(25192348-25192411)
chr8 (184-282)||(4611481-4611579)
chr8 (232-302)||(13436958-13437028)
chr8 (181-275)||(27101459-27101553)
chr8 (232-282)||(27213542-27213592)
chr8 (236-278)||(28642407-28642449)
chr8 (232-282)||(39954293-39954343)
chr8 (245-282)||(7658471-7658508)
chr8 (237-282)||(12606843-12606888)
chr8 (245-282)||(13203649-13203686)
chr8 (181-226)||(18069193-18069238)
chr8 (181-226)||(18964115-18964160)
chr8 (180-281)||(22197757-22197858)
chr8 (232-281)||(22595989-22596038)
chr8 (237-282)||(28385008-28385053)
chr8 (237-278)||(28745498-28745539)
chr8 (237-282)||(29776036-29776081)
chr8 (232-281)||(30271306-30271355)
chr8 (237-282)||(31580141-31580186)
chr8 (241-282)||(33405398-33405439)
chr8 (232-272)||(36107633-36107674)
chr8 (181-226)||(43737883-43737928)
chr8 (238-282)||(8798845-8798889)
chr8 (243-279)||(13018287-13018323)
chr8 (236-276)||(18067954-18067994)
chr8 (245-281)||(18407727-18407763)
chr8 (247-279)||(22493504-22493536)
[»] scaffold0652 (1 HSPs)
scaffold0652 (183-281)||(477-575)
[»] scaffold0171 (2 HSPs)
scaffold0171 (255-311)||(23438-23494)
scaffold0171 (255-288)||(23529-23562)
[»] scaffold0053 (1 HSPs)
scaffold0053 (181-317)||(8742-8873)
[»] scaffold0050 (1 HSPs)
scaffold0050 (237-317)||(70278-70353)
[»] scaffold0044 (1 HSPs)
scaffold0044 (246-302)||(53189-53245)
[»] scaffold0003 (1 HSPs)
scaffold0003 (232-317)||(241589-241680)
[»] scaffold0223 (1 HSPs)
scaffold0223 (232-302)||(20167-20237)
[»] scaffold0136 (1 HSPs)
scaffold0136 (180-281)||(3864-3970)
[»] scaffold0103 (1 HSPs)
scaffold0103 (232-281)||(51806-51855)
[»] scaffold0020 (1 HSPs)
scaffold0020 (237-306)||(135302-135371)
[»] scaffold0361 (1 HSPs)
scaffold0361 (245-281)||(14538-14574)
[»] scaffold0008 (1 HSPs)
scaffold0008 (238-302)||(263366-263430)
[»] scaffold0236 (1 HSPs)
scaffold0236 (236-299)||(25765-25828)
[»] scaffold0168 (1 HSPs)
scaffold0168 (179-282)||(20985-21088)
[»] scaffold0066 (1 HSPs)
scaffold0066 (232-281)||(33378-33427)
[»] scaffold0025 (1 HSPs)
scaffold0025 (243-299)||(23775-23832)
[»] scaffold0011 (1 HSPs)
scaffold0011 (232-281)||(17764-17813)
[»] scaffold0306 (1 HSPs)
scaffold0306 (245-312)||(13408-13476)
[»] scaffold0152 (1 HSPs)
scaffold0152 (245-312)||(21851-21919)
[»] scaffold0123 (1 HSPs)
scaffold0123 (234-282)||(44539-44587)
[»] scaffold0227 (1 HSPs)
scaffold0227 (245-288)||(7319-7362)
[»] scaffold0007 (1 HSPs)
scaffold0007 (181-288)||(225276-225383)
[»] scaffold0036 (1 HSPs)
scaffold0036 (245-299)||(9744-9798)
[»] scaffold0022 (1 HSPs)
scaffold0022 (244-282)||(90850-90888)
[»] scaffold1528 (1 HSPs)
scaffold1528 (245-278)||(1043-1076)
[»] scaffold0246 (1 HSPs)
scaffold0246 (245-317)||(19584-19655)
[»] scaffold0116 (1 HSPs)
scaffold0116 (181-226)||(9842-9887)
[»] scaffold0018 (2 HSPs)
scaffold0018 (245-281)||(178833-178870)
scaffold0018 (232-281)||(192264-192313)
[»] scaffold0004 (1 HSPs)
scaffold0004 (232-281)||(92802-92851)
[»] scaffold0722 (1 HSPs)
scaffold0722 (245-293)||(7035-7083)
[»] scaffold0122 (1 HSPs)
scaffold0122 (245-281)||(8018-8054)


Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 12 - 308
Target Start/End: Complemental strand, 11891190 - 11890907
Alignment:
Q  12 atgaattgctttctttgaccactcaaacttgtcccactcactaacccggccatcatagtggaataacacaatagtgaagttttctgagaactgtaatgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891190 atgaattgctttctttgaccactcaaacttgtcccactcactaacccggccatcatagtggaataacacaatagtgaagttttctgagaactgtaatgtt 11891091  T
Q  112 aagaccaagagttatacaaagagaaaaacaaattagaaagattagcacatgcgcctaatagtaatgatactatgaagcacggatacggacacagacatca 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||  |||| ||    
T  11891090 aagaccaagagttatacaaagagaaaaacaaattagaaagattagcgcatgcgcctaatagtaataatactatgaagtacggatacggacatggacacca 11890991  T
Q  212 gacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacga 308  Q
    |||             |||||| |||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  11890990 gac-------------acggacactgatacggttaataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgtcggacacga 11890907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 180 - 317
Target Start/End: Complemental strand, 5409952 - 5409815
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||||||||||||| |||||||||| | || |||||| |||||     ||||||| || | ||||||||||||||||||||||||||||||| |||    
T  5409952 actatgaagcacggatacagacacagacaccggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaat 5409853  T
Q  280 tatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||  ||||| |||| |||||||||||||||||||||||    
T  5409852 tacaagtgtcggtgtcgtgtcggacacgacacgtgtcc 5409815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 9778452 - 9778580
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||        ||||||| | | |||||||||||||||||||||||||||| |||||    
T  9778452 ctatgaagcacggatacggacacggacaccggacacgacacggaca--------ctgacacagctgataatttgaaaaaatcacataattcagtataatt 9778543  T
Q  281 atgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |  ||||| |||| |||||||||||| ||||||||||    
T  9778544 acaagtgtcggtgtcgtgtcggacacaacacgtgtcc 9778580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 317
Target Start/End: Original strand, 13770634 - 13770771
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||| |||||||| |||| | |||||| |||||||||||||||     |||| ||||| | ||||||||| ||||||| |||||||||||||||||    
T  13770634 actatgaaacacggatatggactcggacatcggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaat 13770733  T
Q  280 tatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||  ||||| | || |||||||||||| ||||||||||    
T  13770734 tacaagtgtcgttgtcgtgtcggacacaacacgtgtcc 13770771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 1433398 - 1433534
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||| ||| |||| |  |||||||||||||||    |||| ||||| ||||||||||||| |||||||||| |||  ||||||||    
T  1433398 ctatgaagcacggatacgggcacggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaatt 1433497  T
Q  281 atgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||  |||| |||| ||||||||||| |||| ||||||    
T  1433498 atatgtgtcggtgtcgtgtcggacaagacatgtgtcc 1433534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 25481846 - 25481946
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||| ||||| |||||| ||||| ||| |||||     |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  25481846 ctatgaagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 25481945  T
Q  281 a 281  Q
    |    
T  25481946 a 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 24339596 - 24339707
Alignment:
Q  191 cggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtag 290  Q
    |||||||||| || |||| | ||||||||| ||||||    |||| ||||| | |||||||||||||||||||||||||||||||||||||  ||||| |    
T  24339596 cggatacggatacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T
Q  291 gtgccgtgtcgg 302  Q
    ||| ||||||||    
T  24339696 gtgtcgtgtcgg 24339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 32094072 - 32093999
Alignment:
Q  245 taataatttgaaaaaa-tcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||||||||| |||||||||||||||||||||  | ||| |||| |||||||||||||||||||||||    
T  32094072 taataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacgacacgtgtcc 32093999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 42720994 - 42720904
Alignment:
Q  186 aagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||||||||||| ||||| |||      ||| |||||| | |||||||||||||||||||||||||| | |||||||||    
T  42720994 aagcacggatacggacacagacatcagacatgacactgac------acgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattat 42720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 317
Target Start/End: Complemental strand, 43027520 - 43027448
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||| |||| |||||| ||||||||||||||||    
T  43027520 taataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtcc 43027448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 11700794 - 11700849
Alignment:
Q  228 acggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  11700794 acggacgctgacaccgttaataatttgacaaaatcacataattcaatgtaattatg 11700849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 30730981 - 30731080
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| ||||||||||| |||| ||||||||||||  |||   | |||| ||||| |  |||||||||| ||||||||||||||||||||||||    
T  30730981 ctatgaagcacagatacggacacggacaccagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 11061189 - 11061091
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||| |||||| || ||||||||||||     || | ||||| | |||||||||||||||||||||||||| ||| ||||||    
T  11061189 atgaagcacggatacggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataatta 11061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 26033529 - 26033455
Alignment:
Q  228 acggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||| ||||| | | |||||||||||||||||||||||||||||||||||||  ||||| |||  ||||||||    
T  26033529 acggacactgacgcagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcgg 26033455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 7438706 - 7438771
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||  ||||| |||| | ||||||    
T  7438706 gacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcgg 7438771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 16341496 - 16341565
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacac 306  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||  |||  |||| ||||||||||||    
T  16341496 gacactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcggacac 16341565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 11665504 - 11665448
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgt 288  Q
    ||||||||||   |||||||||||||||||||||||||||||| ||||||| |||||    
T  11665504 acgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgt 11665448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 26733253 - 26733348
Alignment:
Q  186 aagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| ||||| || |||| |||||||||||||||||     |||  ||||| | ||||||||||| |||||||||||||||||| ||||||    
T  26733253 aagcacggaaacggataccgacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaatta 26733348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 29787433 - 29787382
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||| ||||| | ||||||||||| |||||||||||||||||||||||||||    
T  29787433 acgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatg 29787382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 2424622 - 2424660
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattatg 2424660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 9408386 - 9408328
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||| |||| ||| ||||    
T  9408386 ttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcgg 9408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 18039006 - 18039064
Alignment:
Q  245 taataatttgaaaa-aatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||||||||| |||||||||||||||||||||||  ||||| |||| ||||||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 18039064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 19213794 - 19213844
Alignment:
Q  228 acggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||| ||||||||| ||||||||| ||||||||||||||| ||||||||    
T  19213794 acggacactgacactgctaataattttaaaaaatcacataatgcagtgtaa 19213844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 18215237 - 18215176
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacac 306  Q
    ||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||| |||||    
T  18215237 taataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacac 18215176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 22602774 - 22602705
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    |||| ||||| || ||| |||||| ||||||||||||||||||||||||||  |||| |||| |||||||    
T  22602774 acgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 3991332 - 3991368
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3991332 taataatttgaaaaaatcacataattcagtataatta 3991368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 7058434 - 7058490
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    |||||||||||||||||||  ||||||||||||||||  ||||| |||| |||||||    
T  7058434 taataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgtcg 7058490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 301
Target Start/End: Complemental strand, 7328803 - 7328686
Alignment:
Q  178 atactatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgta 277  Q
    |||||||||||||||||||||||||| ||      ||||||||| |||||    |||  || |||| ||||||||||| ||||| |||||||| ||||||    
T  7328803 atactatgaagcacggatacggacaccga------acacgacacagacattaacacgtcgatactgctaataatttgagaaaataacataatttagtgta 7328710  T
Q  278 attatgagtgtaggtgccgtgtcg 301  Q
    |||||  |||| |||| |||||||    
T  7328709 attatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 7758317 - 7758401
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    ||||||||||   ||||||||| | ||||| | |||||||||| |||||||| |||| |||| |||||||||||| ||| |||||    
T  7758317 acgctgacaccactaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtcggacaccacatgtgtc 7758401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 12289116 - 12289160
Alignment:
Q  239 cactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||    
T  12289116 cactgctaataatttgagaaaatcacataattcagtggaattatg 12289160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 13300418 - 13300454
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13300418 taataatttgaaaaaatcatataattcagtgtaatta 13300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 15680817 - 15680884
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||||||  |||||||||||||||| ||||||||||| |||||     | ||||||||||||||||||||||    
T  15680817 taataattaaaaaaaatcacataatttagtgtaattataagtgt-----cggtgtcggacacgacacgtgtcc 15680884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 19992009 - 19992057
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||| ||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcggtg 19992057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 27944991 - 27945104
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| |      |||||||||||||||     |||| |||||   ||||||||||| ||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccg------gacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatt 27945084  T
Q  281 atgagtgtaggtgccgtgtc 300  Q
    |  ||||| |||| ||||||    
T  27945085 acaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 32308115 - 32308163
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  32308115 acgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 5548686 - 5548745
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacac 306  Q
    ||||||||| ||||||| ||||||||||||||||||  ||||  ||| ||||||||||||    
T  5548686 ataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcggacac 5548745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 18013135 - 18013088
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||  ||||||||| ||||||| ||||||||||||||||||||    
T  18013135 ctgacactactaataatttaaaaaaattacataattcagtgtaattat 18013088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 35861972 - 35862007
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||||||||||||||||| |||||||    
T  35861972 taataatttgaaaaaatcacataattcaatgtaatt 35862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 8057004 - 8056959
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  8057004 tgacacagttaataattt-aaaaaattacataattcagtgtaattat 8056959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 11272637 - 11272580
Alignment:
Q  247 ataatttgaaaaaatcacata--attcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||||||||||||||||  ||||||||||||||  ||||| |||| ||||||||    
T  11272637 ataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcgg 11272580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 14729709 - 14729747
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  14729709 taataatttgagaaaatcacgtaattcagtgtaattatg 14729747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 17307904 - 17307958
Alignment:
Q  248 taatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||| ||||| ||||||||||||||||||||  |||| |||| ||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 17851374 - 17851476
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgct--gacactgttaataatttgaaaaaatcacataattcagtgta 277  Q
    |||||||||||||||||| ||||| |||| | ||||||||| |||  ||| ||| |   || || | ||||||||| | |||||||||||||||||||||    
T  17851374 actatgaagcacggatacagacacggacaccggacacgacatgga--taccgacacatcgataccgctaataattttagaaaatcacataattcagtgta 17851471  T
Q  278 attat 282  Q
    |||||    
T  17851472 attat 17851476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 38143230 - 38143268
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  38143230 ttaataatttgaaaaaatcacataatttaatgtaattat 38143268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 1401033 - 1401070
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  1401033 taataatttgagaaactcacataattcagtgtaattat 1401070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 2334254 - 2334314
Alignment:
Q  243 gttaataatttgaaaa--aatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    ||||||||||||||||  |||||||||||| ||||||||||  ||||| |||| |||||||    
T  2334254 gttaataatttgaaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtcg 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 10377507 - 10377552
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||| | | ||||||| ||||||||||||||||||    
T  10377507 gacactgttaataatataagaaaatcatataattcagtgtaattat 10377552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 15902830 - 15902867
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattat 15902867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 20549799 - 20549836
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  20549799 taataatttgagaaaatcacgtaattcagtgtaattat 20549836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 22868050 - 22868087
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  22868050 taataatatgagaaaatcacataattcagtgtaattat 22868087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 23191891 - 23191940
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | ||||||||||| ||||||||||| |||||||||||||    
T  23191891 acgccgacaccgctaataatttgagaaaatcacatatttcagtgtaatta 23191940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 3938152 - 3938188
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||| |||||||||||||||||| |||||||||    
T  3938152 aataatttaaaaaaatcacataattcaatgtaattat 3938188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 8234154 - 8234186
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgta 277  Q
    ||||||||||||||||| |||||||||||||||    
T  8234154 taataatttgaaaaaataacataattcagtgta 8234186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 11831440 - 11831476
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  11831440 taataatttgaaaaaatcatataatttagtgtaatta 11831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 12278836 - 12278880
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||| ||||||||| | ||||| ||||||||||||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattat 12278880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 19206023 - 19206095
Alignment:
Q  210 cagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||     |||| ||||| | ||||||||||| |||||||||||||||| | |||||||    
T  19206023 cagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattat 19206095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 21880160 - 21880196
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  21880160 taataatttgagaaaattacataattcagtgtaatta 21880196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 22306526 - 22306574
Alignment:
Q  232 acgctgacactgttaataatttgaaaa-aatcacataattcagtgtaat 279  Q
    ||||||| || | |||||||||||||| |||||||||||||||||||||    
T  22306526 acgctgagaccgctaataatttgaaaaaaatcacataattcagtgtaat 22306574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 30813820 - 30813856
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  30813820 taataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Original strand, 43249988 - 43250044
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgt 288  Q
    |||| ||||| | ||||||||||| ||||| ||||||| |||||||||||| |||||    
T  43249988 acgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgt 43250044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 1486823 - 1486688
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| |||||||||||| || | | || |||||||||| |     |||||||||| | |||||||||||||||||||||||||||||||||||||    
T  1486823 tatgaagcatggatacggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 1486724  T
Q  282 tgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    | ||||| |||| |||||||||||||||||||||||    
T  1486723 taagtgtcggtgtcgtgtcggacacgacacgtgtcc 1486688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 398880 - 398779
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||| | |||| | |||||||||||||||     |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  398880 ctatgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 398781  T
Q  281 at 282  Q
    ||    
T  398780 at 398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 6612286 - 6612166
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| |||||||||||  ||| | |||||||||||||||     |||| || || ||||||||||||||||||| ||||||||||||||||||    
T  6612286 ctatgaagcacagatacggacacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaatt 6612187  T
Q  281 atgagtgtaggtgccgtgtcg 301  Q
    |  ||||| |||| |||||||    
T  6612186 acaagtgtcggtgtcgtgtcg 6612166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 113294 - 113363
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  113294 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcg 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 24577290 - 24577182
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||||||||||||||||||| ||      ||||||||||||||      |||||||||   |||||||||||||||||||||||||||||||||||    
T  24577290 actatgaagcacggatacggacactga------acacgacacggaca------cgctgacacaactaataatttgaaaaaatcacataattcagtgtaat 24577203  T
Q  280 tatgagtgtaggtgccgtgtc 300  Q
    ||  ||||| |||| ||||||    
T  24577202 tacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 40181860 - 40181916
Alignment:
Q  226 atacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  40181860 atacggacacagacactgctaataatttgagaaaatcacataattcagtgtaattat 40181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 41877585 - 41877485
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||  || | |||||||||||| ||||   | |||| ||||| | ||||||||||| ||||| |||||||| |||||||||    
T  41877585 ctatgaagcacggatacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaatt 41877486  T
Q  281 a 281  Q
    |    
T  41877485 a 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 42359564 - 42359464
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||||||||||||  ||| |  |||| |||||||||     ||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  42359564 ctatgaagcacggatacggacacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaatt 42359465  T
Q  281 a 281  Q
    |    
T  42359464 a 42359464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 12611962 - 12612008
Alignment:
Q  233 cgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  12611962 cgctgacactgttagtaatttgaaaaaatcacataattgagtgtaat 12612008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 19562685 - 19562599
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg-ccgtgtcggacacgacacgtgtcc 317  Q
    |||| ||||||| ||||||||||| |||||| |||| ||||||||||||||  ||||||||| | |||||||| || ||||||||||    
T  19562685 acgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtcagtgtcggatacaacacgtgtcc 19562599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 25272426 - 25272544
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| ||||||  ||| | ||||||||||||||||  ||| |   ||  |||||| ||||| ||||||| |||||||||||||| |||||||||    
T  25272426 ctatgaagcatggatacaaacatatacatcagacacgacacaaacacagacactttgacacagttaacaatttgagaaaatcacataatttagtgtaatt 25272525  T
Q  281 atgagtgtaggtgccgtgt 299  Q
    || ||||| |||| |||||    
T  25272526 ataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 1864939 - 1864894
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  1864939 gacacagttaataatttgagaaaatcacataattcagtgtaattat 1864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 40258985 - 40258948
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40258985 ttaataatttgaaaaaatcacataattcagtgtaatta 40258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 47989505 - 47989562
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| |||| ||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 47989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 3490498 - 3490405
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| ||||||| | |||||||||| |||      |||| ||||||| ||||||||||| ||||  |||| ||||||||||||||    
T  3490498 tatgaagcacggatacggatacagacaccggacacgacactgac------acgccgacactgctaataatttgagaaaactacattattcagtgtaatta 3490405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 35919317 - 35919265
Alignment:
Q  255 aaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacg 307  Q
    |||||||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  35919317 aaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcggacacg 35919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 37598840 - 37598906
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||||||||||||||||||| |||||||||||||||| |||||     | ||||||||||||||||||||||    
T  37598840 taataatttgaaaaaatcaca-aattcagtgtaattataagtgt-----cggtgtcggacacgacacgtgtcc 37598906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 1705043 - 1704988
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    ||||||||||||||||||||||||||||| |||||||  ||||| |||| ||||||    
T  1705043 taataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 5898331 - 5898280
Alignment:
Q  231 gacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||| | ||||||| ||||||||||||||||||||||||||||||    
T  5898331 gacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattat 5898280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 5944289 - 5944347
Alignment:
Q  245 taataatttgaaaa--aatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||| |||| |||||||    
T  5944289 taataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcg 5944347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 7918328 - 7918225
Alignment:
Q  179 tactatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||||||||||||| ||| ||||  |||| | |||||||||| ||||     |||||||||    ||||||||||| ||||||||||||||||||||||    
T  7918328 tactatgaagcacggttacagacatggacaccggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaa 7918229  T
Q  279 ttat 282  Q
    ||||    
T  7918228 ttat 7918225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 18337338 - 18337373
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaatta 18337373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 44482240 - 44482295
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||| ||||||||||||||||||||||||||  |||| |||| ||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcgg 44482295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 9709767 - 9709865
Alignment:
Q  184 tgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||| ||||  ||||||||||||||||||||||     | ||  |||| | ||||||||||| |||||||||||||||  |||||||||    
T  9709767 tgaagcacggatacagacatggacatcagacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattat 9709865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 13997878 - 13997928
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| |||||| |||| ||||||||||||||||||||||||||||    
T  13997878 acgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattat 13997928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 15323169 - 15323243
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||||||||||||||||||||| ||||||||| | |||||  ||  ||||| ||| | |||||||||||    
T  15323169 gttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgttggatatgacacgtgtcc 15323243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 36878456 - 36878506
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  36878456 acgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 36878506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 38078771 - 38078676
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacga-cacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||||||||||| |||| | ||||||| ||| ||||      ||  ||||| | |||||||||||||||||||||||||||| ||||||    
T  38078771 ctatgaagcacggatacggacacggacaccggacacgaacactgaca------cgtcgacacagctaataatttgaaaaaatcacataattcaatgtaat 38078678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 9103585 - 9103682
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||| ||||||  ||| | |||| ||| ||||||     |||| ||||| |||||||||||||||||||||||||||| ||| ||||    
T  9103585 tatgaagcacggatatggacacgaacacctgacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaat 9103682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 10577850 - 10577805
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||    
T  10577850 ctatgaagcacggatacggacacggacaccggacacgacacggaca 10577805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 16927236 - 16927199
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  16927236 taataatttgaaaaaatcatataattcagtgtaattat 16927199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 19324562 - 19324607
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||    
T  19324562 gacactgctgataatttgagaaaatcacataattcagtgtaattat 19324607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 22515951 - 22515902
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | |||||||||||||||||||||||||| ||||||||||    
T  22515951 acgcagacacagctaataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 22881725 - 22881631
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||  ||||| |||| | |||||||||| ||||      ||| |||||   |||||||||||||||||||||||||| |||||||||    
T  22881725 ctatgaagcacggatatagacacggacaccggacacgacactgaca------cgccgacacaactaataatttgaaaaaatcacataatttagtgtaatt 22881632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 25452206 - 25452161
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||    
T  25452206 acactgctaataatttgagaaaatctcataattcagtgtaattatg 25452161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 30847782 - 30847737
Alignment:
Q  234 gctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||    
T  30847782 gctgacactgctaataatttgaaaaaatgacataattcaatgtaat 30847737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 34298444 - 34298481
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  34298444 taataatttgagaaaatcacataattcagtgtaattat 34298481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 46348447 - 46348367
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||| ||||| | ||||||||||||||||||| |||||| ||||||||||  |||||     | ||||||||||||||||||||||    
T  46348447 acgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgt-----cggtgtcggacacgacacgtgtcc 46348367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 2896236 - 2896140
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgta 277  Q
    |||||||| |||||||| | ||| |||| | ||||| |||||||||     |||| ||||| | ||||||||||| |||||||||||||||||||||    
T  2896236 ctatgaagaacggatacagtcacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 9449060 - 9449024
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9449060 ttaataatttgaaaaaatcacataattcagtataatt 9449024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 9629951 - 9629895
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    ||||||||||| ||||||| |||||||||||| ||||| ||||| |||| |||||||    
T  9629951 taataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcg 9629895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 12443524 - 12443476
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  12443524 acgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 18190159 - 18190123
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaatta 18190123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 23738686 - 23738722
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23738686 taataatttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 31015051 - 31015087
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 31672946 - 31672910
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31672946 taataatttgaaaaaatcacttaattcagtgtaatta 31672910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 32461514 - 32461438
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg-----ccgtgtcggacacgacacgtgtc 316  Q
    |||||||||||||||||||||||||| | ||||||||  ||||| ||||     | |||||||||||||||||||||    
T  32461514 taataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgtgtgtcggtgtcggacacgacacgtgtc 32461438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 34712440 - 34712372
Alignment:
Q  239 cactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacg 307  Q
    ||||| ||||||||||| ||||| |||||||| |||||||||||  ||||  ||| |||||||||||||    
T  34712440 cactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacg 34712372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 609573 - 609534
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgaca 220  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  609573 ctatgaagcacgtatacggacacagacatcggacacgaca 609534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 6427358 - 6427413
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    ||||||||||| |||||||||||||||| |||||||||  |||| |||| ||||||    
T  6427358 taataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 9033059 - 9033020
Alignment:
Q  245 taataatttgaaaaaa-tcacataattcagtgtaattatg 283  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  9033059 taataatttgaaaaaaatcacataattcagtgtaattatg 9033020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 9828052 - 9828087
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9828052 taataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 282
Target Start/End: Complemental strand, 25098604 - 25098569
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||| ||||||||||||||||||||||||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattat 25098569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 247 - 282
Target Start/End: Original strand, 25361896 - 25361931
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||| ||||||||||||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattat 25361931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 2283676 - 2283722
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    |||||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  2283676 ataatttgaaaaaatcacatgattcaatgtaattataagtgttggtg 2283722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 13436453 - 13436503
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||| ||||||||| |  |||||||||||||||||||||||||    
T  13436453 acgccgacactgctaataatttaaggaaatcacataattcagtgtaattat 13436503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 282
Target Start/End: Complemental strand, 23531834 - 23531792
Alignment:
Q  240 actgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| |||||||||||||| ||||||||||||| |||||||||    
T  23531834 actgctaataatttgaaaatatcacataattcaatgtaattat 23531792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 28674795 - 28674845
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| |||| ||||||||||||| ||||| |||||||||||| |||||||    
T  28674795 acgctaacaccgttaataatttgagaaaattacataattcagtataattat 28674845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 5376564 - 5376495
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    |||| ||||| | ||||||||| | ||||| |||||||||||||||||||  ||||| |||| |||||||    
T  5376564 acgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcg 5376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 5927404 - 5927355
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||| |||||| ||||||||||||||||||| |||||| | ||||||||    
T  5927404 acgctaacactgctaataatttgaaaaaatcatataatttaatgtaatta 5927355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 10233261 - 10233298
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattat 10233298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 14332693 - 14332656
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattat 14332656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 16164366 - 16164329
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||||||| | |||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattat 16164329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 17425144 - 17425107
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  17425144 taataatttgataaaatcacataattcaatgtaattat 17425107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 17754319 - 17754352
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||||||||||||||| ||||||||||||||||    
T  17754319 taataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 20157401 - 20157340
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacac 306  Q
    ||||||| ||| ||||||||||||||||||||||| ||  |||| |||| |||||| |||||    
T  20157401 taataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacac 20157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 21378553 - 21378622
Alignment:
Q  212 gacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||    || | ||||| | |||||| |||||||||| |||||||||||||||||||    
T  21378553 gacacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaatta 21378622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 22794129 - 22794092
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  22794129 taataatttgaaaaaatgacataatacagtgtaattat 22794092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 23653007 - 23653040
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||||||||||||||||||||| ||||||||||    
T  23653007 taataatttgaaaaaatcacatacttcagtgtaa 23653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 34257969 - 34257924
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||||    
T  34257969 gacaccgttaataatttaataaaatcacataatttagtgtaattat 34257924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 34371707 - 34371775
Alignment:
Q  230 ggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||| ||||||| | |||||||| || ||||||||||||||||||||||||||  |||| |||| |||||    
T  34371707 ggacactgacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 41597585 - 41597540
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    |||||||||||||||||||| || |||| || ||||||||||||||    
T  41597585 ctatgaagcacggatacggatacggacaccaaacacgacacggaca 41597540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 51410032 - 51410069
Alignment:
Q  245 taataatttgaaaa-aatcacataattcagtgtaatta 281  Q
    |||||||||||||| |||||||||||||||||||||||    
T  51410032 taataatttgaaaaaaatcacataattcagtgtaatta 51410069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 52284654 - 52284699
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    |||||||||| |||||||| || ||| |||||||||||||||||||    
T  52284654 ctatgaagcatggatacggtcatagaaatcagacacgacacggaca 52284699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 1815265 - 1815301
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| |||| |||||||||||||||||||||||||||    
T  1815265 taattattttaaaaaatcacataattcagtgtaatta 1815301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 6332679 - 6332714
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||| ||||||||||||||||||||||    
T  6332679 taataatttgaaaa-atcacataattcagtgtaatta 6332714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 10572640 - 10572604
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  10572640 taataatttgagaaaatcacataattcggtgtaatta 10572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 11605986 - 11605950
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  11605986 taataatttgaaaaaatcatataattcagtgaaatta 11605950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 26830542 - 26830582
Alignment:
Q  184 tgaagcacggatacggacacagacatcagacacgacacgga 224  Q
    ||||||||||||| |||||| |||||| |||||||||||||    
T  26830542 tgaagcacggatatggacacggacatcggacacgacacgga 26830582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 27471617 - 27471581
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  27471617 taataatttgagaaaagcacataattcagtgtaatta 27471581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 28273139 - 28273103
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| |||||||||||||| |||||||||||||||||    
T  28273139 taatcatttgaaaaaatcatataattcagtgtaatta 28273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 31694763 - 31694704
Alignment:
Q  245 taataatttgaaaaaa--tcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||||||||||  |||||||||||||| ||||||  ||||| |||| ||||||||    
T  31694763 taataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcgg 31694704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 32434767 - 32434731
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  32434767 taataatttgaaaaagtcacataattcattgtaatta 32434731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 48450638 - 48450602
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  48450638 taataatttgaaaaaataacataatttagtgtaatta 48450602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 46626 - 46726
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||     |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  46626 ctatgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatt 46725  T
Q  281 a 281  Q
    |    
T  46726 a 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 9107485 - 9107364
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||| ||||| |||| | |||||||||||||||     |||| ||||| | ||||||||||||||||||||| ||||||||||||||    
T  9107485 ctatgaagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatt 9107386  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  ||||| |||| ||||||||    
T  9107385 acaagtgtcggtgtcgtgtcgg 9107364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 16766642 - 16766762
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| |||||||||||| |||| | ||||||||| |||||     |||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  16766642 tatgaagcatggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T
Q  282 tgagtgtaggtgccgtgtcgg 302  Q
      ||||| |||| ||||||||    
T  16766742 caagtgtcggtgtcgtgtcgg 16766762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 7938060 - 7938172
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| |||| | ||||||||| |||||     |||| ||||| | ||||||||||||||||||| |||||| |||||||||    
T  7938060 ctatgaagcacggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatt 7938159  T
Q  281 atgagtgtaggtg 293  Q
    || ||||| ||||    
T  7938160 ataagtgtcggtg 7938172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 8777088 - 8776988
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||     |||| |||||   ||||||||||||||||||||| ||||||||||||||    
T  8777088 ctatgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatt 8776989  T
Q  281 a 281  Q
    |    
T  8776988 a 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 12696319 - 12696403
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    |||| ||||| | ||||||||||||||||| |||||||||||||||||||  |||||  ||| ||||||||||||||||||||||    
T  12696319 acgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtc 12696403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 5970217 - 5970102
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| ||||||||||| |||| | |||| ||||||||||      ||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  5970217 ctatgaagcacagatacggacacggacaccggacatgacacggaca------cgtcgacacagttaataatttgaaaaaatcacataattcagtgtaatt 5970124  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  | ||| |||| ||||||||    
T  5970123 acaaatgtgggtgtcgtgtcgg 5970102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 10770725 - 10770659
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacac 311  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||| |||||| ||||||||||    
T  10770725 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacgacac 10770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 315
Target Start/End: Original strand, 28715241 - 28715368
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacac--gacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||||||||||||| || |||| | |||||  ||||||   |||||||| ||||||| | ||||||||||||||||| ||||||||||||||||    
T  28715241 ctatgaagcacggatacggatacggaca-cggacaccggacacg---atacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaa 28715336  T
Q  279 ttatgagtgtaggtgccgtgtcggacacgacacgtgt 315  Q
    |||  |||||     | ||||||||||||||||||||    
T  28715337 ttacaagtgt-----cggtgtcggacacgacacgtgt 28715368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 9025553 - 9025484
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacac 306  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||  |||| |||| |||||| |||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacac 9025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 306
Target Start/End: Original strand, 9027122 - 9027247
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| ||||||||||| |||  | |||||||||||||||     |||| ||||| | ||||||||||| | ||||||||||||| ||||||||    
T  9027122 ctatgaagcaccgatacggacacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatt 9027221  T
Q  281 atgagtgtaggtgccgtgtcggacac 306  Q
    ||  |||| |||| |||||| |||||    
T  9027222 atatgtgtcggtgtcgtgtccgacac 9027247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 426629 - 426529
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| |||||| ||||| || | | |||||||||||||||     |||| ||||| |||||||||||||||||||||||||||| | |||||||    
T  426629 ctatgaagcatggatacagacacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaatt 426530  T
Q  281 a 281  Q
    |    
T  426529 a 426529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 17341728 - 17341672
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgt 288  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||||    
T  17341728 acgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgt 17341672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 34595142 - 34595208
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    |||||||||||||||||||||||||||||||||||||  |||||     | |||||||||||||||||||||    
T  34595142 taataatttgaaaaaatcacataattcagtgtaattacaagtgt-----cggtgtcggacacgacacgtgtc 34595208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 8365628 - 8365513
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||||||||||||      |||||||||||||||||     |||| |||||   |||||||||||||| |||||||||||| ||||||||    
T  8365628 ctatgaagcacggatacggacac------cagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatt 8365535  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  ||||| |||| ||||||||    
T  8365534 acaagtgtcggtgtcgtgtcgg 8365513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 3398614 - 3398698
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||| ||||| | ||||||||||||||| ||| |||||||||||||||||| ||| | |||| ||||| ||||||||||| |||||    
T  3398614 acgccgacacagctaataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtcgtgttggacacgacacatgtcc 3398698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 31579283 - 31579238
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagtgtaattatg 31579238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 1681702 - 1681802
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||| |||||||||| |  |||||||||  |||     |||| |||||   |||||||||||||||||||| |||||||||||||||    
T  1681702 ctatgaagcacggatacagacacagacaccgaacacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaatt 1681801  T
Q  281 a 281  Q
    |    
T  1681802 a 1681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 16388283 - 16388247
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||||||||||||||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaattat 16388247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 31384928 - 31384964
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  31384928 taataatttgaaaaaatcacataattcagtgtaatta 31384964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 32839708 - 32839660
Alignment:
Q  234 gctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  32839708 gctgacactgttaataatttgagaaaatcacataatccagtataattat 32839660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 33001353 - 33001274
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    |||| ||||||| |||||||||||||||||||||||||| | |||||||||  ||||     | |||||||||||||||||||||    
T  33001353 acgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgt-----cggtgtcggacacgacacgtgtc 33001274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 5462684 - 5462731
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  5462684 ctgacaccgttaataatttgagaaaatcacataattcattgtaattat 5462731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 7977948 - 7977845
Alignment:
Q  178 atactatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgta 277  Q
    ||||||| ||||||||||| |||||| ||||   ||||||||| ||| |     |||| ||||| | ||||||||||||||||| |||||||||||||||    
T  7977948 atactataaagcacggatatggacacggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgta 7977849  T
Q  278 atta 281  Q
    ||||    
T  7977848 atta 7977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 8713979 - 8714045
Alignment:
Q  237 gacactgttaataatttgaaaa-aatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||  | ||| |||| ||||||||    
T  8713979 gacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcgg 8714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 8805687 - 8805585
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| ||||||  ||||| ||| |||||||||||| ||||     |||  | ||||| ||||||||||| |||||||||||||| |||||||||    
T  8805687 ctatgaagcatggatacatacacaaacaccagacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaatt 8805588  T
Q  281 atg 283  Q
    |||    
T  8805587 atg 8805585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 9658839 - 9658924
Alignment:
Q  196 acggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||| |||||||||||||||||     |||| ||||| | ||||||||| | ||||||||||||||||||||||||||    
T  9658839 acggatacagaca-cagacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattat 9658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 19040347 - 19040397
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  19040347 acgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 19040397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 26562684 - 26562734
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  26562684 acgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattat 26562734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 32320733 - 32320683
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||| |||||    
T  32320733 acgctgacaccgttaataatttgataaaatcacataattcaatgtcattat 32320683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 32511727 - 32511669
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||| | ||||||||| | |||||||||||||||||||||||||| ||||| ||||    
T  32511727 ctgacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtg 32511669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 34225860 - 34225822
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34225860 taataatttgaaaaaatcgcataattcagtgtaattatg 34225822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 7151420 - 7151457
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7151420 taataatttgaaaaaatcacataattaagtgtaattat 7151457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 7265644 - 7265607
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattat 7265607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 7996437 - 7996392
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  7996437 gacactgctaataatttgagaaaatcatataattcagtgtaattat 7996392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 8022364 - 8022409
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  8022364 gacactgctaataatttgagaaaatcatataattcagtgtaattat 8022409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 9522899 - 9522956
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| ||||  |||||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcgg 9522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 17327700 - 17327635
Alignment:
Q  251 tttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    ||||| |||||||||||||| ||||||| |||  ||||  ||| ||||||||||||||||||||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtc 17327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 17841653 - 17841604
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | |||||||||||||||||||||||||| ||||||||||    
T  17841653 acgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 2117084 - 2117143
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggaca 305  Q
    |||||||||||||||||||||||||||| || |||||| |||||  ||| |||||||||||    
T  2117084 taataatttgaaaaaatcacataattcaatgcaattataagtgt-cgtgtcgtgtcggaca 2117143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 7086797 - 7086865
Alignment:
Q  239 cactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacg 307  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||  |||| ||||  ||||| ||||||    
T  7086797 cactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagacacg 7086865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 7801207 - 7801171
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||||||||| |||||||    
T  7801207 taataatttgaaaaaatcacataattcagcgtaatta 7801171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 16833316 - 16833352
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||| |||||||||||||    
T  16833316 taataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 18367780 - 18367901
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacg-gacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||||||||||||||||| |||| | ||||||||| ||||  |||  |||| ||||| | ||||  ||| | ||||||||| ||| ||||||||    
T  18367780 actatgaagcacggatacggacacggacaccggacacgacatggac--acgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaa 18367877  T
Q  279 ttatgagtgtaggtgccgtgtcgg 302  Q
    ||||  |||| |||| ||||||||    
T  18367878 ttatatgtgtcggtgtcgtgtcgg 18367901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 28152107 - 28152173
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||||||| ||||||||||||||||||||||  |||||     | ||||||||||||||||||||||    
T  28152107 taataatttgaaaa-atcacataattcagtgtaattacaagtgt-----cggtgtcggacacgacacgtgtcc 28152173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 31959167 - 31959203
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31959167 taataatttgaaaaaatcacataatgcagtgtaatta 31959203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 6389702 - 6389785
Alignment:
Q  196 acggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||| | |||||||||||||||  |  |||| ||||| | ||||||||||| ||||| | |||||| ||||||||    
T  6389702 acggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaat 6389785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 10842527 - 10842574
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||| ||||| | |||||||||||||||||||||||||| ||||||||    
T  10842527 acgccgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 21925000 - 21924949
Alignment:
Q  231 gacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||| ||||||||||| || |||| ||||||||||||||||||    
T  21925000 gacgccgacactgctaataatttgagaatatcaaataattcagtgtaattat 21924949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 24138426 - 24138505
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    ||||||| ||||||||||||||||||| |||||| |||||| ||||  || | ||||  |||| ||||| ||||||||||    
T  24138426 gacactgctaataatttgaaaaaatcatataattaagtgtatttatatgtatcggtgttgtgttggacatgacacgtgtc 24138505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 1700362 - 1700408
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||| ||||||||||||| |||||||||||||| ||||| ||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtg 1700408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 4118386 - 4118348
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  4118386 gttaataatttgaaaaaatcacataattaaatgtaatta 4118348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 5732574 - 5732524
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| ||||||||||||| ||||||||||| || |||||||||||    
T  5732574 acgccgacaccgttaataatttgagaaaatcacatattttagtgtaattat 5732524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 12627628 - 12627594
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||| |||||||||||||||||||||||||||    
T  12627628 taataatgtgaaaaaatcacataattcagtgtaat 12627594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 282
Target Start/End: Complemental strand, 13360420 - 13360386
Alignment:
Q  248 taatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||| ||||||||||||||||||||||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattat 13360386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 403915 - 403882
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||||||||||||||||||| |||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaa 403882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 1532248 - 1532285
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  1532248 taataatttgataaaattacataattcagtgtaattat 1532285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 2386816 - 2386771
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||    
T  2386816 ctatgaagcacggatactgacatggacatcagacacgacacagaca 2386771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 6349789 - 6349752
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  6349789 ttaataatttgaaaaaattacataattcattgtaatta 6349752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 7569219 - 7569182
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattat 7569182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 9617442 - 9617479
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattat 9617479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 9629328 - 9629428
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||| ||  |||||||||   ||||||||||||| ||    |||| ||||| |  |||||||||| |||||||||||||||| |||||||    
T  9629328 ctatgaagcacggagact-acacagacactggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaatt 9629426  T
Q  281 at 282  Q
    ||    
T  9629427 at 9629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 11591917 - 11591884
Alignment:
Q  249 aatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattat 11591884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 25038131 - 25038086
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||| ||||||||||||| ||||| |||||||| ||||||||||    
T  25038131 tgacaccgttaataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 30866195 - 30866158
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattat 30866158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 34073398 - 34073361
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattat 34073361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 853910 - 853874
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||| |||| |||||    
T  853910 taataatttgaaaaaatcacataattaagtgcaatta 853874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 1191751 - 1191715
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  1191751 taataatttgaaaaattcacaaaattcagtgtaatta 1191715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 2224234 - 2224270
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  2224234 taataatttaaaaaaatcatataattcagtgtaatta 2224270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 282
Target Start/End: Original strand, 7027251 - 7027287
Alignment:
Q  247 ataatttgaaaa-aatcacataattcagtgtaattat 282  Q
    |||||||||||| ||||||||||||||||||||||||    
T  7027251 ataatttgaaaaaaatcacataattcagtgtaattat 7027287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 280
Target Start/End: Original strand, 7930312 - 7930348
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  7930312 ttaataatttgaaaaaatcacataatttagtgaaatt 7930348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 9911580 - 9911524
Alignment:
Q  245 taataatttgaaa-aaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    ||||||||| ||| ||||||||||||||||||||||||  ||||| |||| ||||||    
T  9911580 taataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 9911524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 17435207 - 17435243
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  17435207 taataattttaaaaaattacataattcagtgtaatta 17435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 20576684 - 20576628
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcg 301  Q
    |||||||| || |||||  ||||||||||||||||||| ||||| |||| |||||||    
T  20576684 taataattcgagaaaattgcataattcagtgtaattataagtgttggtgtcgtgtcg 20576628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 273
Target Start/End: Complemental strand, 25010253 - 25010225
Alignment:
Q  245 taataatttgaaaaaatcacataattcag 273  Q
    |||||||||||||||||||||||||||||    
T  25010253 taataatttgaaaaaatcacataattcag 25010225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 26314684 - 26314648
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||| |||||||| |||||||||    
T  26314684 aataatttgaaaaaatcatataattcaatgtaattat 26314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 34446563 - 34446607
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||| | ||||||||||| ||||| |||||||||||||||||    
T  34446563 ctgacacggataataatttgagaaaatgacataattcagtgtaat 34446607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 15796410 - 15796309
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||||| |||||| |||| | |||||||||||||||     |||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  15796410 actatgaagcacggatatggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaat 15796311  T
Q  280 ta 281  Q
    ||    
T  15796310 ta 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 25948938 - 25948876
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacg 307  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  25948938 taataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacacg 25948876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 3164140 - 3164043
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||||||||||||||| ||||| |||| | |||||||||||||||   | |||  ||||| | ||||||||||||||||||||||||||||||||||    
T  3164140 ctatgaagcacggatacagacacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 21479068 - 21479198
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| |||||||||||| |||| | |||||||||| ||||      ||| ||||| | ||||||||||||||||||||| ||||||||||||||    
T  21479068 ctatgaagcatggatacggacacggacaccggacacgacactgaca------cgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatt 21479161  T
Q  281 atgagtgtaggtg-ccgtgtcggacacgacacgtgtc 316  Q
    |  ||||| |||| | |||||||||||||||| ||||    
T  21479162 actagtgtcggtgtcggtgtcggacacgacacatgtc 21479198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 313
Target Start/End: Complemental strand, 34307895 - 34307763
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| ||||||||||||  ||| | |||| ||||| ||||     |||||||||| | ||||||||||| ||||||||||| ||||||||||||    
T  34307895 ctatgaagcatggatacggacacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaatt 34307796  T
Q  281 atgagtgtaggtgccgtgtcggacacgacacgt 313  Q
    || ||||| |   | ||||||||||||||||||    
T  34307795 ataagtgtcgtgtcggtgtcggacacgacacgt 34307763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 4987355 - 4987285
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||||    
T  4987355 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcgg 4987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 26508105 - 26508167
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgc 294  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  26508105 acgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgc 26508167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 28918009 - 28918078
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||| |||   |||||||||||||||||    
T  28918009 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgt---ggacacgacacgtgtcc 28918078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 25093446 - 25093547
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||| ||||||||  ||||||||| | |||||||||| ||||     |||| |||||||||||| |||||| ||||||||| ||||||||||||||    
T  25093446 ctatgaagtacggatacaaacacagacaccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaatt 25093545  T
Q  281 at 282  Q
    ||    
T  25093546 at 25093547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 10268601 - 10268501
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||||||| |||| ||||||    |||||| |||||     |||| ||||| |||||||||||||||||||||||||||| |||||||||    
T  10268601 ctatgaagcacggatacgaacacggacatcgattacgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaatt 10268502  T
Q  281 a 281  Q
    |    
T  10268501 a 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 27505254 - 27505326
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||  ||||||||||||||| ||||||||||  ||||| |||| |||||| ||||||||||||||||    
T  27505254 taataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtcc 27505326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 24205156 - 24205049
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||| || ||||| |||| | |||||||||||||||     |||| ||||| | ||||||||||| ||||| ||||||| ||||||||||    
T  24205156 ctatgaagcacggacacagacacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatt 24205057  T
Q  281 atgagtgt 288  Q
    || |||||    
T  24205056 ataagtgt 24205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 49651837 - 49651778
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggac 304  Q
    |||||||||||||||||||||||||||| ||||||||  ||||| |||| ||||||||||    
T  49651837 taataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 51206421 - 51206371
Alignment:
Q  228 acggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  51206421 acggacactgacacagctaataatttgaaaaaatcacataattcagtgtaa 51206371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 7928458 - 7928495
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattat 7928495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 8383232 - 8383313
Alignment:
Q  212 gacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||||||||    |||| ||||| | ||||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  8383232 gacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtg 8383313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 11251971 - 11252024
Alignment:
Q  230 ggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||| |||||| || ||||||||||| |||||||||||||||||||||||||||    
T  11251971 ggacactgacattgctaataatttgagaaaatcacataattcagtgtaattatg 11252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 16789018 - 16789075
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||| |||| ||||||    
T  16789018 gttaataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtc 16789075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 302
Target Start/End: Original strand, 1509532 - 1509604
Alignment:
Q  230 ggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||| ||||||| | |||||||||||||||||||||||||| ||||||||||  ||||| |||| ||| ||||    
T  1509532 ggacactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcgg 1509604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 4201397 - 4201441
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| |||||||||||||||||||||||||||| |||||||||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattat 4201441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 7171446 - 7171576
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggac--gctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||||||||||||||||||||| | ||||||||||||  |||| |||  || ||||| | |  ||||||| |||||||| ||||||| ||||||    
T  7171446 ctatgaagcacggatacggacacagacaccggacacgacacgg--atactgacatgccgacacagcttgtaatttg-aaaaatcatataattcggtgtaa 7171542  T
Q  279 ttatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||  ||||| |     ||||||||||||||||||||||    
T  7171543 ttacaagtgttg-----gtgtcggacacgacacgtgtcc 7171576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 10954960 - 10955027
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||||||||||||||||||||||||||||||||| |  |||||     | ||||||||||||||||||||||    
T  10954960 taataatttgaaaaaatcacataattcagtgtaatcacaagtgt-----cggtgtcggacacgacacgtgtcc 10955027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 14979176 - 14979224
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  14979176 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 34910325 - 34910361
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  34910325 taataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 35994852 - 35994753
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||  |||| | ||||||||| |||||     | || ||||| | ||||||||||||||| ||||||||||||||||||||    
T  35994852 ctatgaagcacggatacggacatggacaccggacacgacatggacaatgacaagccgacacagctaataatttgaaaaa-tcacataattcagtgtaatt 35994754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 55401083 - 55401150
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||||||||||||||||||| ||||||||||  |||||     | ||||||||||||||||||||||    
T  55401083 taataatttgaaaaaatcacataatttagtgtaattacaagtgt-----cggtgtcggacacgacacgtgtcc 55401150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 750734 - 750612
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca-tacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||| |    |||  |||||   |||||||||||||| ||||||||||||  || |||    
T  750734 ctatgaagcacggatacggacacggacaccggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataattcgctgcaat 750635  T
Q  280 tatgagtgtaggtgccgtgtcgg 302  Q
    ||  ||||| |||| ||||||||    
T  750634 tacaagtgtcggtgtcgtgtcgg 750612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 9624640 - 9624686
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||    
T  9624640 tgacactgctaataatttgagaaaatcacataattcaatgtaattat 9624686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 27277897 - 27277851
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  27277897 gacactgctaataatttgagaaaatcacataatttagtgtaattatg 27277851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 10335401 - 10335304
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||||||||||| |||| |||| | |||||||||||||||     |||| |||||   ||||||||||||||| ||||||| || |||||||    
T  10335401 ctatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaa 10335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 11313859 - 11313814
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||    
T  11313859 gacactgctaataatttgagaaaatcacataatttagtgtaattat 11313814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 14027959 - 14028004
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||    
T  14027959 ctatgaagcacggatacggacacggacaccggacacgacacggaca 14028004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 14209121 - 14209178
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||| |||||||||||||||||||||||||||  |||||  ||| ||||||||    
T  14209121 taataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 14209178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 16192809 - 16192764
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  16192809 gacaccgttaataatttgagaaaataacataattcagtgtaattat 16192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 21257046 - 21257001
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||    
T  21257046 tgacacagctaataatttgaaaaaatcacataattcagtataatta 21257001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 25064874 - 25064955
Alignment:
Q  202 acagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||||| | |||||||||| |||||    |||| ||||| | |||| ||||||||||||||||||||| ||||||||||||    
T  25064874 acagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattatg 25064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 29508452 - 29508489
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattat 29508489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 32804599 - 32804554
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||||    
T  32804599 gacaccgttaataatttgagaaaatcacataatttagtgtaattat 32804554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 15314937 - 15314873
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||||||  ||| ||||||||||||||||||||||| |||||||||||  |||| |||| |||||    
T  15314937 ctgacacaattattaatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 17005670 - 17005622
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  17005670 taataatttgataaaatcatataattcagtgtaattataagtgtcggtg 17005622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 34185187 - 34185119
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    |||| ||||| | ||||||||| ||||||||||| |||||||||||||||  ||||| |||| ||||||    
T  34185187 acgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtc 34185119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 20503474 - 20503509
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||| |||||||||||||||||||    
T  20503474 aataatttgaaaaaatgacataattcagtgtaatta 20503509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 24633462 - 24633415
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| |||||||||||| ||||||||| ||||||| |||||||||    
T  24633462 ctgacacagttaataatttggaaaaatcacgtaattcaatgtaattat 24633415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 14840343 - 14840305
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  14840343 ttaataatttcagaaaatcacataattcagtgtaattat 14840305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 25775515 - 25775553
Alignment:
Q  244 ttaataatttgaaaa-aatcacataattcagtgtaatta 281  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  25775515 ttaataatttgaaaataatcacataattcagtgtaatta 25775553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 28812523 - 28812577
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||||||||||| |||||||||||||||||||| |||  ||||| |||| |||||    
T  28812523 taataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgt 28812577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 1550148 - 1550185
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||  |||||||||||||||    
T  1550148 taataatttgaaaaaatcacactattcagtgtaattat 1550185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 3618870 - 3618927
Alignment:
Q  226 atacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||||| ||||||| | ||||||||||| |||||  |||||||||| |||||||||    
T  3618870 atacggacactgacaccgctaataatttgagaaaattccataattcagcgtaattatg 3618927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 7614474 - 7614429
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||||||| | |||||||||||||||||| |||||||    
T  7614474 gacacagttaataatttaagaaaatcacataattcagtataattat 7614429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 8039886 - 8039829
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||||| ||||| | ||||||||||||||||||  |||| |||| ||||||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcgg 8039829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Complemental strand, 8587069 - 8587036
Alignment:
Q  248 taatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||| ||||||||||    
T  8587069 taatttgaaaaaatcacataattaagtgtaatta 8587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 9800048 - 9800105
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||||| ||||| ||||||||| |||||||| | ||||| |||| ||||||||    
T  9800048 taataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcgg 9800105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 10318155 - 10318110
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    |||||||||||||||||| |||| |||| | |||||||||||||||    
T  10318155 ctatgaagcacggatacgaacacggacaccggacacgacacggaca 10318110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 10690313 - 10690276
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  10690313 taataatctgagaaaatcacataattcagtgtaattat 10690276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 11493412 - 11493375
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  11493412 taataatgtgagaaaatcacataattcagtgtaattat 11493375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 12674597 - 12674528
Alignment:
Q  200 acacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataat 269  Q
    ||||||||| ||||||||||||||||||    || | ||||||| ||||||||||| ||||||| |||||    
T  12674597 acacagacaccagacacgacacggacattgacacaccgacactgctaataatttgagaaaatcaaataat 12674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 12704015 - 12704052
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  12704015 taataatttgagaaaagcacataattcagtgtaattat 12704052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 14832107 - 14832164
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||||||||||||||||||| ||| ||||||||  |||||  ||| ||||||||    
T  14832107 taataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcgg 14832164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 18426957 - 18426994
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  18426957 taataatttcaaaaaatcacataattcggtgtaattat 18426994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 23870610 - 23870573
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  23870610 taataatttgaaaaaatcatataattcagtgtgattat 23870573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 38731226 - 38731263
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  38731226 taataattttaaaaaatcacataattcagtgtagttat 38731263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 39002044 - 39002077
Alignment:
Q  249 aatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||||| |||||||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaattat 39002077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 41961701 - 41961644
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||||||||| ||||||| |||| |||||||||  ||||| |||| ||||||||    
T  41961701 taataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcgg 41961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 49505205 - 49505168
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattat 49505168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 11610529 - 11610561
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgta 277  Q
    ||||||||| |||||||||||||||||||||||    
T  11610529 taataatttaaaaaaatcacataattcagtgta 11610561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 15544692 - 15544744
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgt 288  Q
    |||||| | ||||||||||| ||||||||||||||| || |||||||| ||||    
T  15544692 tgacaccgctaataatttgataaaatcacataattctgtataattatgtgtgt 15544744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 15812871 - 15812835
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||| |||||||||||| |||||||||||||    
T  15812871 aataatttgagaaaatcacataactcagtgtaattat 15812835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 22774167 - 22774132
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacg 217  Q
    |||||||||||||||||||||||||||| ||||||||    
T  22774167 ctatgaagcacggatacggacacagaca-cagacacg 22774132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 26492256 - 26492220
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| | |||||||||||||||    
T  26492256 taataatttgaaaaaatcatacaattcagtgtaatta 26492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 30994940 - 30994896
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||| ||||||||| | ||||||||| ||||||||||||||||    
T  30994940 acactgctaataatttaagaaaatcacacaattcagtgtaattat 30994896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 40052327 - 40052367
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattca 272  Q
    |||| ||||| | ||||||||||||||||||||||||||||    
T  40052327 acgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 55212963 - 55213007
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||| ||||||||||| |||||||||||||||| |||| |||||    
T  55212963 gacacagttaataattttaaaaaatcacataatttagtgcaatta 55213007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 317
Target Start/End: Complemental strand, 3947877 - 3947745
Alignment:
Q  178 atactatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgta 277  Q
    |||||||||||| | ||||||||||| |||| || ||| |||||||||||      || ||||| | |||||||||||||||||| ||||||||||||||    
T  3947877 atactatgaagctcagatacggacacggacaccacaca-gacacggacat------gccgacacagctaataatttgaaaaaatcgcataattcagtgta 3947785  T
Q  278 attatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||  |||||  ||| |||||||||||||||||||||||    
T  3947784 attacaagtgtcagtgtcgtgtcggacacgacacgtgtcc 3947745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 23293101 - 23292970
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| ||||||||||| |||| | |||||||||||||||     |||| ||||| | |||||||||||||||||||||||||||||| |||||    
T  23293101 ctatgaagcacagatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataatt 23293002  T
Q  281 atgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |  |||||     | ||||||||||||||||||||||    
T  23293001 acaagtgt-----cggtgtcggacacgacacgtgtcc 23292970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 19482612 - 19482733
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||     |||| |||||   |||||||||||||| |||||||||||| ||||||||    
T  19482612 ctatgaagcacggatacgaacacagacaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatt 19482711  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  ||||| |||| ||||||||    
T  19482712 acaagtgttggtgtcgtgtcgg 19482733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 54580091 - 54580007
Alignment:
Q  228 acggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||     | ||||||||||||||||||||||    
T  54580091 acggacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgt-----cggtgtcggacacgacacgtgtcc 54580007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 11596403 - 11596348
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  11596403 taataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 11596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 12895167 - 12895101
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacac 311  Q
    ||||||||||||||||||||||||||||  |||||||  ||||| |||| |||||||||||||||||    
T  12895167 taataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacgacac 12895101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 14126224 - 14126119
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||  ||||| ||||||||||   |||||||||| ||||     |||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  14126224 atgaagcatagatacagacacagacagtggacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattat 14126125  T
Q  283 gagtgt 288  Q
     |||||    
T  14126124 aagtgt 14126119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 15029760 - 15029810
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  15029760 acgcagacactgctaataatttgaaaatatcacataattcagtgtaattat 15029810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 281
Target Start/End: Complemental strand, 27706286 - 27706192
Alignment:
Q  187 agcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||| |||| ||||||||||| |||||     |||  |||||  |||||||||| |||||||||||||||| ||||||||||    
T  27706286 agcacggatacggacacggacaccagacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 21873478 - 21873384
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||| |||||||||||| ||||| |||||  |||||||||||||||        |||||||||  |||||||||| ||||||||||||||||||| ||||    
T  21873478 ctattaagcacggatacagacacggacattggacacgacacggaca--------ctgacactgcaaataatttgataaaatcacataattcagtgaaatt 21873387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 21929339 - 21929245
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||| |||||||||||| ||||| |||||  |||||||||||||||        |||||||||  |||||||||| ||||||||||||||||||| ||||    
T  21929339 ctattaagcacggatacagacacggacattggacacgacacggaca--------ctgacactgcaaataatttgataaaatcacataattcagtgaaatt 21929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 22440659 - 22440614
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  22440659 gacaccgttaataatttgagaaaatcacataattcagtgtaattat 22440614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 24343451 - 24343552
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||| || ||||| |||| | ||||||||||||||      |||| ||||| | ||||||||||| ||||| ||||||||||||||||||    
T  24343451 ctatgaagcacggacacagacacggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaatt 24343550  T
Q  281 at 282  Q
    ||    
T  24343551 at 24343552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 24999041 - 24999090
Alignment:
Q  234 gctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  24999041 gctgacacagttgataatttgaaaaaatcacacaattcagtgtaattatg 24999090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 36635268 - 36635369
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| ||||| ||||||||||| | |||||||| ||||||     ||||  ||||   ||||||||||| ||||||||||||||||||||||||    
T  36635268 ctatgaagcatggataaggacacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatt 36635367  T
Q  281 at 282  Q
    ||    
T  36635368 at 36635369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 28964299 - 28964263
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  28964299 taataatttgaaaaaatcacataattcagtgtaatta 28964263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 29205452 - 29205488
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  29205452 taataatttgaaaaaatcacataattcagtgtaatta 29205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 40179746 - 40179650
Alignment:
Q  186 aagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| |||||||| |||||| |  ||| ||||||||||     ||| ||||||  |||||| ||||||||||||||||||||||||||||||||    
T  40179746 aagcacgcatacggactcagacaccgaacatgacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattat 40179650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 903928 - 903967
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  903928 gttaataatttgagaaaatcacataattcagtgtaattat 903967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 15659818 - 15659752
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggac 304  Q
    |||||| ||||||||||| |||||| |||||||| ||||||||||  |||| |||| ||||||||||    
T  15659818 acactgctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcggac 15659752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 20633429 - 20633526
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||     |||  ||||| | |||||||||||||||   |||||||||| |||||||    
T  20633429 ctatgaagcacggatacggacacggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaa---acataattcaatgtaatt 20633525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 42640476 - 42640573
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttg---aaaaaatcacataattcagtgta 277  Q
    ||||||||||||||||||||||| |||||  ||||| ||||||||      |||| ||||| | | ||||||||   |||||||||||||||||||||||    
T  42640476 ctatgaagcacggatacggacacggacattggacacaacacggac------acgccgacacagctgataatttgaaaaaaaaatcacataattcagtgta 42640569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 49431020 - 49431101
Alignment:
Q  232 acgctgacactgttaataatttgaaaa-aatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||| ||||| | |||||||||||||| |||||||||||||||||||||||  |||||     | ||||||||||||||||||||||    
T  49431020 acgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgt-----cggtgtcggacacgacacgtgtcc 49431101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 56257933 - 56257979
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaattatg 56257979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 4157102 - 4157147
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||    
T  4157102 ctatgaagcacggatacggacacggacaccagacacgacacagaca 4157147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 6485663 - 6485626
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  6485663 ttaataatttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 8423769 - 8423732
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8423769 taataatttgagaaaatcacataattcagtgtaattat 8423732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 30982929 - 30982872
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||| |||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||    
T  30982929 taatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 12895325 - 12895277
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||    
T  12895325 taataatttgaaaaaatcacataattttgtgtaattataagtgtcggtg 12895277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 14465126 - 14465090
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||| ||||||||    
T  14465126 taataatttgaaaaaatcacataattcaatgtaatta 14465090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 16189721 - 16189765
Alignment:
Q  249 aatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||    
T  16189721 aatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 21945511 - 21945547
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||| |||||||||||||||||||    
T  21945511 taataatttgaaaaaatgacataattcagtgtaatta 21945547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 32273577 - 32273509
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgt 313  Q
    ||||||||||||||||| |||||||||||  ||||||| ||| | | || || ||||||||||||||||    
T  32273577 taataatttgaaaaaataacataattcagaataattataagtttcgatgtcgagtcggacacgacacgt 32273509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 35158036 - 35157988
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||| ||||    
T  35158036 taataatttggaaaaatcacataatttagtgtaattataagtgtcggtg 35157988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 2234245 - 2234296
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||| ||| ||| ||||||||| |||||||||||||||| ||||||||||    
T  2234245 acgctgtcaccgttgataatttgagaaaatcacataattcaatgtaattatg 2234296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 2362092 - 2361990
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacac--gacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||| ||||||||||||||  |||||||||||  ||||  |||||    || | ||||| | ||||||||||||||||| |||||||| |||||||    
T  2362092 ctatgaagtacggatacggacacgaacatcagacacacgacattgacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaa 2361993  T
Q  279 tta 281  Q
    |||    
T  2361992 tta 2361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 32910559 - 32910602
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgt 288  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattatgggtgt 32910602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 44081692 - 44081573
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| |||||||||||  ||||| ||||||||| |||||     || | || |  ||||||||||||||||||||| |||||| | |||||||    
T  44081692 ctatgaagcaccgatacggacacgaacatcggacacgacaaggacactgacacaccgatatcgttaataatttgaaaaaatcatataatttaatgtaatt 44081593  T
Q  281 atgagtgtaggtgccgtgtc 300  Q
    ||  ||||  ||||||||||    
T  44081592 atatgtgtcagtgccgtgtc 44081573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 1213280 - 1213235
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||    
T  1213280 tgacactgttaataattt-aaaaaattatataattcagtgtaattat 1213235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 5775410 - 5775372
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  5775410 ttaataatttgagaaaatcacataattaagtgtaattat 5775372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 12077831 - 12077869
Alignment:
Q  240 actgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  12077831 actgttaataatttgagaaaatcacataattcaatgtaa 12077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 12708090 - 12708128
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgac 219  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  12708090 ctatgaagcacgaatacggacacggacatcagacacgac 12708128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 17425440 - 17425402
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  17425440 taataatttgagaaaatcgcataattcagtgtaattatg 17425402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 40613445 - 40613495
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| | ||||| ||||| ||||||||||||||||||||||||||    
T  40613445 acgccgacaccgctaatattttgagaaaatcacataattcagtgtaattat 40613495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 9996840 - 9996885
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||  |||||||||| |||||||||||||||||| |||||||    
T  9996840 gacactgacaataatttgagaaaatcacataattcagtataattat 9996885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 11931280 - 11931321
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||| ||||||||| |||||||||||||||||| |||||||    
T  11931280 gacaccgttaataatatgaaaaaatcacataatttagtgtaa 11931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 37203272 - 37203317
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtag 290  Q
    ||||||||||||||||| |||||||| ||||||||||  |||||||    
T  37203272 taataatttgaaaaaatgacataatttagtgtaattacaagtgtag 37203317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 40481645 - 40481716
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtg-taggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||||||| ||||||||||||||||||||||  |||| || || | |||| |||||||||||||||||    
T  40481645 taataatttgaaaa-atcacataattcagtgtaattacaagtgttatgt-cggtgttggacacgacacgtgtcc 40481716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 51701266 - 51701323
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||||||||||| |||||||| ||||||||||  |||||  ||| ||||||||    
T  51701266 taataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcgg 51701323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 4383376 - 4383411
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||| ||||||||||||||||||||||    
T  4383376 taataatttgaaaa-atcacataattcagtgtaatta 4383411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 6863154 - 6863198
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||||||    
T  6863154 acaccgttaataatttgaaaaaatcatataattcggtgcaattat 6863198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 281
Target Start/End: Complemental strand, 12224242 - 12224210
Alignment:
Q  249 aatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||| |||||||||||||||||||||||||||    
T  12224242 aatttaaaaaaatcacataattcagtgtaatta 12224210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 12797388 - 12797353
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||| |||||||||||||||||||||    
T  12797388 taataatttgaaaaa-tcacataattcagtgtaatta 12797353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 38847063 - 38847027
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| || ||||||||||||||    
T  38847063 taataatttgaaaaaatcatattattcagtgtaatta 38847027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 47263994 - 47264030
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||| |||||||||||||||| |||||||||    
T  47263994 taataatttgtaaaaatcacataattctgtgtaatta 47264030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 43001800 - 43001879
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||  ||||| ||||  |||||||||||||||||||||    
T  43001800 gacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggacacgacacgtgtc 43001879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 31084318 - 31084403
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||| ||||| | |||||||||||||||||||||||||||| ||||||||  ||||| | || |||||||||||||||||||||||    
T  31084318 acgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtcc 31084403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 300
Target Start/End: Complemental strand, 13287509 - 13287395
Alignment:
Q  186 aagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgag 285  Q
    |||||||||||||||||| |||| | |||||||||||||||     |||  ||||| | |||||||||||||||||||||||||||||||||| ||  ||    
T  13287509 aagcacggatacggacacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaag 13287410  T
Q  286 tgtaggtgccgtgtc 300  Q
    ||| |||| ||||||    
T  13287409 tgtcggtgtcgtgtc 13287395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 21522694 - 21522815
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| | || | |||||||||||||||     |||| ||||| | ||||||||| ||||||| ||||||||||||||||||    
T  21522694 ctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatt 21522793  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  | ||| |||| ||||||||    
T  21522794 acaattgtcggtgtcgtgtcgg 21522815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 21533260 - 21533381
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| | || | |||||||||||||||     |||| ||||| | ||||||||| ||||||| ||||||||||||||||||    
T  21533260 ctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatt 21533359  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  | ||| |||| ||||||||    
T  21533360 acaattgtcggtgtcgtgtcgg 21533381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 15382421 - 15382560
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttg--aaaaaatcacataattcagtgtaa 278  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||     |||| ||||| | ||||||||||  ||||||||| |||||||||| |||    
T  15382421 ctatgaagcacggatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataa 15382520  T
Q  279 ttatgagtgtaggtg-ccgtgtcggacacgacacgtgtcc 317  Q
    |||  ||||| |||| | |||| ||||||||||| |||||    
T  15382521 ttacaagtgtcggtgtcggtgttggacacgacacatgtcc 15382560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 23016106 - 23015968
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacat--acggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||||||||||||||||||||| |||  | |||||||||||||||   ||   | ||||||  |||||| |||||| ||||||||||||||||||||||    
T  23016106 ctatgaagcacggatacggacacggactccggacacgacacggacaccgacactctctgacatcgttaatcatttgagaaaatcacataattcagtgtaa 23016007  T
Q  279 ttatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||  |||| | ||  || |||||||||||| ||||||    
T  23016006 ttataggtgtcgatgttgtatcggacacgacatgtgtcc 23015968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 39698536 - 39698606
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||  |||||  ||| ||||||||    
T  39698536 acgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 39698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 6471957 - 6471880
Alignment:
Q  228 acggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggaca 305  Q
    |||||| ||||||| | ||||||||||| ||||||||||||||||||||||||||  |||| |||| ||||| |||||    
T  6471957 acggacactgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgtgggaca 6471880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 17177138 - 17177038
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||     ||||  |||| | ||||||||||||||||||| | |||||| |||||||    
T  17177138 ctatgaagcacggatacggacacagacaccagatacgactcggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaatt 17177039  T
Q  281 a 281  Q
    |    
T  17177038 a 17177038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 21191158 - 21191071
Alignment:
Q  194 atacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||| |||| | |||||||||||||||     | || ||||| | |||||||||||||||||||||||||||||||||||||    
T  21191158 atacggacactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 317
Target Start/End: Complemental strand, 36642876 - 36642735
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| ||||||||||| ||||| | |||||||||||||||     |||| ||||| ||||||||||||||||| | ||||| || ||||||| |    
T  36642876 ctatgaagcatggatacggaca-agacaccggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaat 36642778  T
Q  281 atgagtgtaggtgcc------gtgtcggacacgacacgtgtcc 317  Q
    || ||||| |||| |      ||||||||||||||||||||||    
T  36642777 ataagtgtcggtgtcatgttggtgtcggacacgacacgtgtcc 36642735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 7677713 - 7677770
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||| ||||||||    
T  7677713 taataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcgg 7677770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 39205880 - 39205957
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtg 314  Q
    ||||||| ||||||||||| ||||||| ||||||  ||||||||||  |||| |||| |||||| |||||||||||||    
T  39205880 gacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccgacacgacacgtg 39205957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 6247630 - 6247666
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  6247630 taataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 21576796 - 21576760
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  21576796 taataatttgaaaaaatcacataattcagtgtaatta 21576760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 4344737 - 4344784
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||||    
T  4344737 acgctgacaccgataataatttgaaaaaatgacataattcagtgtaat 4344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 19579645 - 19579764
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||||||| |||| |||| | || || |||||||||     |||| ||||| | ||||||||||| |||||||||||||| |||| ||||    
T  19579645 ctatgaagcacggatacgtacaccgacaccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaatt 19579744  T
Q  281 atgagtgtaggtgccgtgtc 300  Q
    |  ||||| |||| ||||||    
T  19579745 acaagtgtcggtgtcgtgtc 19579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 21541984 - 21542095
Alignment:
Q  191 cggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtag 290  Q
    ||||||||||||| |||| |||||||||||| |||||    | || |||||   ||||||||| |||| || |||||||||||||||||||  ||||| |    
T  21541984 cggatacggacacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcg 21542083  T
Q  291 gtgccgtgtcgg 302  Q
    ||| ||||||||    
T  21542084 gtgtcgtgtcgg 21542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 24273091 - 24273044
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  24273091 ctgacacagttattaatttgagaaaatcacataattcagtgtaattat 24273044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 24389123 - 24389170
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  24389123 ctgacacagttattaatttgagaaaatcacataattcagtgtaattat 24389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 308
Target Start/End: Complemental strand, 38749614 - 38749551
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacga 308  Q
    ||||||||||||||||| |||||||||| |||||||||  |||| ||||  |||||||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcggacacga 38749551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 40000594 - 40000555
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgt 276  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  40000594 gacactcttaataatttgaaaaaatcacataattcagtgt 40000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 28588738 - 28588688
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  28588738 acgccgacaccggtaataatttgagaaaatcacataattcagtgtaattat 28588688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 5468029 - 5467992
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattat 5467992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 14674264 - 14674313
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | |||||||||||||||||||||||||| ||||||||||    
T  14674264 acgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 19552607 - 19552562
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgta 277  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||    
T  19552607 acgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 40131629 - 40131666
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40131629 taataatttgaaaaaatcacataattcagtttaattat 40131666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 41091316 - 41091271
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| |||| |||||| ||||||||||||||||||||||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattat 41091271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 24906352 - 24906316
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||| |||||||||||||||||||    
T  24906352 taataatttgaaaaaatgacataattcagtgtaatta 24906316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 41995417 - 41995534
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||||| ||||   || ||||||| ||||     |||| |||||   |||||||| ||||||||||||||||||| ||||||||     
T  41995417 atgaagcacggatacggacacggacactggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta- 41995515  T
Q  283 gagtgtaggtgccgtgtcgg 302  Q
     ||||| |||||||| ||||    
T  41995516 -agtgtcggtgccgtatcgg 41995534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 42893368 - 42893404
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||||||| |||||||||||    
T  42893368 taataatttgaaaaaatcacataatccagtgtaatta 42893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 3966511 - 3966566
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    ||||||||||| ||||||||| ||||||||||||||||  |||| |||| ||||||    
T  3966511 taataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 30098332 - 30098371
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  30098332 gttaataatttgagaaaatcacataattcaatgtaattat 30098371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 4105265 - 4105314
Alignment:
Q  245 taataatttgaaaaaa--tcacataattcagtgtaattatgagtgtaggt 292  Q
    ||||||||||||||||  |||||||||||||||||||||  |||||||||    
T  4105265 taataatttgaaaaaagatcacataattcagtgtaattacaagtgtaggt 4105314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 10298577 - 10298639
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacg 307  Q
    ||||||||||||||| ||||||||| || ||||||||  ||||| |||| ||| |||||||||    
T  10298577 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacacg 10298639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 14873527 - 14873597
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||||||| |||| ||||||||| |||||||||||  |||| |||| | |||||||| | ||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtcc 14873597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 15410563 - 15410465
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||| |||||||||||||   ||||||||||||||||||||||     |||| ||||| | ||||||||| | ||||| | || ||||||||||||    
T  15410563 ctatgaaacacggatacggacgtggacatcagacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaat 15410465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 33035853 - 33035815
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  33035853 ttaataatttgaataaatcatataattcagtgtaattat 33035815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 43564891 - 43564937
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| ||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtg 43564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 16203854 - 16203809
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||    
T  16203854 gacactgctaataatttgagaaaatctcataatttagtgtaattat 16203809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 17593773 - 17593736
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  17593773 taataatttgagaaaatcacgtaattcagtgtaattat 17593736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 18421900 - 18421855
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| | ||||||||| ||||||||||||| ||||||||||||    
T  18421900 gacactgctgataatttgagaaaatcacataatccagtgtaattat 18421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 19438353 - 19438386
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||| ||||||||||||||||||||||||    
T  19438353 ataatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 20683325 - 20683370
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    |||| |||||||||||||||||| |||| | |||||||||||||||    
T  20683325 ctataaagcacggatacggacacggacaccggacacgacacggaca 20683370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 21351956 - 21351899
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||| |||||| |||||||||||||||||||||  ||||| |||| | ||||||    
T  21351956 taataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcgg 21351899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 27932230 - 27932279
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | ||||||||||| ||||| |||||||||||||||||||    
T  27932230 acgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 30502439 - 30502402
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattat 30502402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 30542782 - 30542745
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattat 30542745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 35017045 - 35017082
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  35017045 taataatttgagaaaatcacataatttagtgtaattat 35017082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 41794131 - 41794090
Alignment:
Q  243 gttaataatttgaaaaaa-tcacataattcagtgtaattatg 283  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  41794131 gttaataatttgaaaaaaatcacataatccagtgtaattatg 41794090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 7218318 - 7218282
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| || ||||||||||||||||||||||||    
T  7218318 taataatttaaataaatcacataattcagtgtaatta 7218282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 8420035 - 8420071
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  8420035 taataatttgaaaaaataacataattcaatgtaatta 8420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 15405106 - 15405070
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  15405106 taataatttgaaaaaatcatataattcaatgtaatta 15405070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 22611801 - 22611761
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattca 272  Q
    |||| ||||||  ||||||||||||||||||||||||||||    
T  22611801 acgccgacactcctaataatttgaaaaaatcacataattca 22611761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 28862262 - 28862302
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacg 222  Q
    ||||||||||||||| |||||| |||||| |||||||||||    
T  28862262 tatgaagcacggatatggacacggacatcggacacgacacg 28862302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 33178033 - 33178069
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  33178033 taataatttaaaaaaatcacataatttagtgtaatta 33178069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 37328894 - 37328838
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||| |||||||||| |||||||||||||||   |||| |||| ||||||||    
T  37328894 aataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcgg 37328838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 41633743 - 41633779
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||| | |||||||||||||||||||    
T  41633743 taataatttgaaaaatttacataattcagtgtaatta 41633779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 282
Target Start/End: Original strand, 21616708 - 21616807
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||||||||||   |||||||||||||||     |||| ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  21616708 atgaagcacggatacggacacagacacatgacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 21616807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 2438832 - 2438734
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||||||||||||||||||| |||| | ||||  |||||||||  | ||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  2438832 actatgaagcacggatacggacac-gacaccggacaaaacacggaca--ctgacgctgacacagctaataatttcaaaaaatcacataattcagtgtaat 2438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 30335361 - 30335461
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||   | |||| |||||   ||||||||||||||||| |||||||| |||||||||    
T  30335361 ctatgaagcacggatacggacacggatctcagacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatt 30335460  T
Q  281 a 281  Q
    |    
T  30335461 a 30335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 28412293 - 28412396
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||| ||| |||||| |||| |||||||||||||||||     |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  28412293 actatgaagcacgaatatggacacggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaat 28412392  T
Q  280 tatg 283  Q
    ||||    
T  28412393 tatg 28412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 12668474 - 12668417
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcgg 12668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 30404914 - 30404865
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  30404914 acgccgacacggttaataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 44860273 - 44860382
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| ||  ||| |||||||||||||||||        ||||||| | ||||||||||| |||||| ||||||||||||||||||    
T  44860273 tatgaagcacggatacggatacgtacaccagacacgacacggaca--------ctgacaccgctaataatttgagaaaatcgcataattcagtgtaatta 44860364  T
Q  282 tgagtgtaggtgccgtgt 299  Q
    |  |||| |||| |||||    
T  44860365 tatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 974755 - 974826
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    |||||||||||||| ||||||| ||||||||||||||  ||||| |||| ||||| |||||||||| |||||    
T  974755 taataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgttggacacgacatgtgtc 974826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 15972826 - 15972948
Alignment:
Q  190 acggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgta 289  Q
    ||||| || |||||||||| |||| ||||||||||||     |||| |||||  |||||||||||||||||| ||| |||||||||||||||  |||||     
T  15972826 acggacacagacacagacaccagatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgt- 15972924  T
Q  290 ggtgccgtgtcggacacgacacgtgtcc 317  Q
        | ||||||||||||||||||||||    
T  15972925 ----cggtgtcggacacgacacgtgtcc 15972948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 21782882 - 21782831
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  21782882 acgccgacactgctaataatttgagaaaatcacataattcagtgtaattatg 21782831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 28677904 - 28677954
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattat 28677954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 29176557 - 29176496
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    |||| ||||| ||||||||||||||||  |||||||||||||||||||||| ||||| ||||    
T  29176557 acgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtg 29176496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 40361869 - 40361768
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgc--tgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||| |||||||||||| || | |  |||||||||  | |||||||| |  ||||||| |||||||||||||||||| |||||||| |||||||    
T  40361869 ctatgaagcatggatacggacacggataccgaacacgacac--agatacggacactatgacactattaataatttgaaaaaattacataatttagtgtaa 40361772  T
Q  279 ttat 282  Q
    ||||    
T  40361771 ttat 40361768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 23058556 - 23058436
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaa-tcacataattcagtgtaatta 281  Q
    |||||||||||| |||||||| || | | |||||||||||||||     ||||  ||||  ||||||||||||||||| ||||||||| |||||||||||    
T  23058556 atgaagcacggacacggacacggatacctgacacgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaatta 23058457  T
Q  282 tgagtgtaggtgccgtgtcgg 302  Q
      ||||| |||| ||||||||    
T  23058456 caagtgtcggtgtcgtgtcgg 23058436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 30717581 - 30717545
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  30717581 taataatttgaaaaaatcacataattcagtgtaatta 30717545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 35449514 - 35449558
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  35449514 acactgttaataatttgagaaaatcacagaattcagtgtaattat 35449558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 2331753 - 2331840
Alignment:
Q  196 acggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||||||||||||  || ||||||||||||    ||||  ||||  |||||||||||| ||||||||||||||||||||| |||||    
T  2331753 acggacacagacatcgaacgcgacacggacattgacacgcaaacaccattaataatttgagaaaatcacataattcagtgtatttatg 2331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 18276466 - 18276577
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||| ||||| |||| | ||||||| || ||||     | || ||||| | ||||||||||| |||||||| ||||||||||||||||    
T  18276466 tatgaagcacggatacagacacggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaatta 18276565  T
Q  282 tgagtgtaggtg 293  Q
    || |||| ||||    
T  18276566 tgtgtgtcggtg 18276577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 21374810 - 21374714
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacg-acacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||||||||||||||||||||| |||| | |||||| ||||  |||      ||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  21374810 actatgaagcacggatacggacacggacaccggacacggacactaaca------cgccgacacagctaataatttgaaaaaattacataattcagtgtaa 21374717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 16069318 - 16069268
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  16069318 acgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 24894384 - 24894458
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacac 306  Q
    |||| ||||| | ||||||||| ||||||||||||||||||||| |||||  ||||| |||  ||||||||||||    
T  24894384 acgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgtcggacac 24894458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 31283991 - 31284093
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    |||||||||||| ||||||||||| |||| | ||||  ||||| |||     |||| ||||||| ||||||||||| ||||||||||||| || ||||||    
T  31283991 actatgaagcacagatacggacacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaat 31284090  T
Q  280 tat 282  Q
    |||    
T  31284091 tat 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 36756395 - 36756341
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||||||||||| |||| |||||||||||||||||||| ||||| |||| |||||    
T  36756395 taataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 11223927 - 11223878
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||| | ||||| ||||||||||| |||||||||||||||||||    
T  11223927 acgctgacacagctaatattttgaaaaaataacataattcagtgtaatta 11223878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 12940986 - 12940950
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| |||||||||||||||||    
T  12940986 taataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 15657872 - 15657908
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||| ||||||||||||||||||||||||||    
T  15657872 taataatttgtaaaaatcacataattcagtgtaatta 15657908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 30527653 - 30527609
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||    
T  30527653 acactgttaataatttgagaaaatcatataatttagtgtaattat 30527609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 36409676 - 36409640
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36409676 ataatttgaaaaaatcacataatttagtgtaattatg 36409640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 37419752 - 37419808
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||||||||||||||| |||||||||||||||  ||||  |||| ||||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcgg 37419808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 18420492 - 18420437
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    |||||| ||||||||||| |||||||||||||||| || |||||| ||||| ||||    
T  18420492 acactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtg 18420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 18622614 - 18622669
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    ||||||||| | ||||||||||||||||||||||||||  |||| |||| ||||||    
T  18622614 taataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 23921259 - 23921298
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  23921259 gttaataatttgagaaaattacataattcagtgtaattat 23921298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 34337289 - 34337202
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataatt 270  Q
    ||||| ||||||||||||||| || | |  | |||||||||||||    |||| ||||| ||| ||||||||||||||||||||||||    
T  34337289 atgaatcacggatacggacacggataccgtatacgacacggacattgacacgccgacacagttgataatttgaaaaaatcacataatt 34337202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 4332926 - 4332972
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatg 283  Q
    ||||||| ||||||||||  |||||||||||||||| ||||||||||    
T  4332926 gacactgataataatttgggaaaatcacataattcaatgtaattatg 4332972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 5473336 - 5473370
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||||||||||||||| |||||||    
T  5473336 taataatttgaaaaaatcacataattcggtgtaat 5473370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 18421914 - 18422007
Alignment:
Q  187 agcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| |||||||||||  |||||| || ||||||||||||     |||| |||||  |||||||||| |||| ||||||||||||||||||||||    
T  18421914 agcatggatacggacat-gacatcggatacgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaatta 18422007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 298
Target Start/End: Complemental strand, 20539783 - 20539672
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||||||||| |      |||||||||||||||     |||  ||||| | ||||||||||||||||||| |||||| |||||||||    
T  20539783 ctatgaagcacggatacggacactg------gacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatt 20539690  T
Q  281 atgagtgtaggtgccgtg 298  Q
    |  ||||| |||| ||||    
T  20539689 acaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 22084890 - 22084848
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||    
T  22084890 acaccgttaataatttgagaaaatcatataattcagtgtaatt 22084848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 5367200 - 5367237
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||  |||||||||||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattat 5367237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 18841077 - 18841028
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||   ||||||||||||||||| |||||||| ||||||||||    
T  18841077 acgctgacacaactaataatttgaaaaaattacataattaagtgtaatta 18841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 19536449 - 19536412
Alignment:
Q  245 taataatttgaaaaaa-tcacataattcagtgtaatta 281  Q
    |||||||||||||||| |||||||||||||||||||||    
T  19536449 taataatttgaaaaaaatcacataattcagtgtaatta 19536412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 23718034 - 23718071
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  23718034 taataatttgagaaagtcacataattcagtgtaattat 23718071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 24105706 - 24105743
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  24105706 taataatttgagaaagtcacataattcagtgtaattat 24105743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 25846749 - 25846786
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  25846749 taataatttgagaaaatcacatgattcagtgtaattat 25846786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 26769461 - 26769506
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||||||||| |||| | |||||||||| ||||    
T  26769461 ctatgaagcacggatacggacacggacaccggacacgacacagaca 26769506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 31808085 - 31808122
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  31808085 taataatttaacaaaatcacataattcagtgtaattat 31808122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 34691856 - 34691819
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  34691856 taataatttgataaaatcatataattcagtgtaattat 34691819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 34714268 - 34714231
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  34714268 taataatttgataaaatcatataattcagtgtaattat 34714231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 34785097 - 34785052
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||| ||||||||||| |||  |||||||||||||||||    
T  34785097 ctatgaagcacagatacggacacggaccccagacacgacacggaca 34785052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 37411295 - 37411258
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  37411295 taataatttgagaaaatcacataattcagtgtgattat 37411258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 37558972 - 37559021
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | |||||||||| ||||||||||||||||| ||||||||    
T  37558972 acgccgacacagctaataatttgtaaaaatcacataattcaatgtaatta 37559021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 38117223 - 38117174
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | ||||||||||||||||||||||| ||| |||||||||    
T  38117223 acgccgacacagctaataatttgaaaaaatcacatacttcggtgtaatta 38117174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 288
Target Start/End: Complemental strand, 10535823 - 10535767
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgt 288  Q
    |||| ||||| | ||||||||||| ||||| ||||||||||||||||| || |||||    
T  10535823 acgccgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgt 10535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 11308053 - 11308021
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||| |||||||||||||||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaat 11308021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 14996275 - 14996204
Alignment:
Q  245 taataatttgaa-aaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    |||||||||||| ||||||| |||||| ||||||||||  ||||| |||| | |||||||||| |||||||||    
T  14996275 taataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtcttgtcggacac-acacgtgtc 14996204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 19959810 - 19959850
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattca 272  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  19959810 acgctgacatcgttaataatttgacaaaatcacataattca 19959850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 32199202 - 32199154
Alignment:
Q  234 gctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||| ||||||||||||| |||||||||||||| ||| |||||||    
T  32199202 gctgtcacagttaataatttgataaaatcacataattaagtataattat 32199154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 33153432 - 33153468
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| |||| |||||||||||||||||||||||||||    
T  33153432 taatgatttaaaaaaatcacataattcagtgtaatta 33153468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 36281691 - 36281727
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  36281691 gttaataatttgagaaaatcacataatttagtgtaat 36281727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 39279676 - 39279720
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  39279676 acaccgttaataatatgagaaaatcaaataattcagtgtaattat 39279720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 39323272 - 39323308
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  39323272 taataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 42832327 - 42832279
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||| ||||| ||||| |||||||||||||| ||||| ||||    
T  42832327 taataatttgagaaaattacatatttcagtgtaattataagtgtcggtg 42832279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 130425 - 130539
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||| |||||||||||| |||| | |||||||||||||||     | || ||||| ||||||| |||||||||||||||||||||||||||||    
T  130425 actatgaagcatggatacggacacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaat 130524  T
Q  280 tatgagtgtaggtgc 294  Q
    ||  ||||| |||||    
T  130525 tacaagtgtcggtgc 130539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 24857954 - 24858093
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttg---aaaaaatcacataattcagtgtaa 278  Q
    ||||||| ||||||||||||||  ||| | ||||||||||||||||    |||| ||||| ||||||||||||   ||||||||||||||||||||||||    
T  24857954 tatgaagaacggatacggacacgaacaccggacacgacacggacatggacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgtaa 24858053  T
Q  279 ttatgagtgtaggtgccgtgtcggacacgacacgtgtccca 319  Q
     ||  ||||| | || |||||||||||||||| ||||||||    
T  24858054 -tacaagtgtcgttgtcgtgtcggacacgacatgtgtccca 24858093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 22651920 - 22652041
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||| |||||||||||||| |||| | |||||||||||||||     |||| ||||| | |||||||||||||||||||||||||||| | |||||    
T  22651920 ctatgaagtacggatacggacactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataatt 22652019  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  ||||| |||| ||||||||    
T  22652020 acaagtgtcggtgtcgtgtcgg 22652041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 11927150 - 11927083
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||  |||| |||| |||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 25566787 - 25566903
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacat---acggacgctgacactgttaataatttgaaaaaatcacataattcagtgta 277  Q
    |||||||||||||||||||| | ||||| |||||||    |||||||   || ||| ||||||| | |||||||||||||||||||||||||||||||||    
T  25566787 ctatgaagcacggatacggatatagaca-cagacac----cggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgta 25566881  T
Q  278 attatgagtgtaggtgccgtgt 299  Q
    ||||  ||||| |||| |||||    
T  25566882 attacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 29510419 - 29510298
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||||||||| ||||  |||| | |||||||||||||||     |||| ||||| | ||||||||||||||||||||| |||||||| |||||    
T  29510419 ctatgaagcacggatactgacatggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatt 29510320  T
Q  281 atgagtgtaggtgccgtgtcgg 302  Q
    |  ||||| ||||  |||||||    
T  29510319 acaagtgtcggtgtagtgtcgg 29510298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 24413675 - 24413567
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataa-tttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||     |  ||||||| |||||||| ||||| ||||  ||||||||||| |||||    
T  24413675 ctatgaagcacggatacggacacggacaccagacacgacacggacactgacatactgacaccgttaataattttgagaaaaatacataattcagggtaat 24413576  T
Q  280 tatgagtgt 288  Q
    ||| |||||    
T  24413575 tataagtgt 24413567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 11803257 - 11803304
Alignment:
Q  235 ctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  11803257 ctgacactgttaataatttaagaaaatcacataattcagtgtaattat 11803304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 11944660 - 11944727
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||||||  |||| |||| |||||    
T  11944660 acgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 15816180 - 15816126
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 41831999 - 41831958
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  41831999 gacacagttaataatttgaaaaaatcacataattcagtgtaa 41831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 4948660 - 4948696
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaatta 4948696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 36450805 - 36450757
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  36450805 taataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtg 36450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 36934615 - 36934715
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||| ||||||||| ||| ||| || ||||||||||||||     |||  ||||| | |||||||| ||||||||||||||||||| ||||||||    
T  36934615 tatgaagcatggatacggatacaaacaccaaacacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T
Q  282 t 282  Q
    |    
T  36934715 t 36934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 926902 - 926791
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||| |||| |||| | |||||||||||||||     ||||  |||||  ||||||||||| |||||| |||  |||||||||||||    
T  926902 tatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaatta 926803  T
Q  282 tgagtgtaggtg 293  Q
    | ||||| ||||    
T  926802 taagtgtcggtg 926791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 2572107 - 2572052
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtc 300  Q
    |||||||||||||||||||||||||| ||||||||||  ||||| |||| ||||||    
T  2572107 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc 2572052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 3025559 - 3025625
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtc 316  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||     | |||||||||||||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgt-----cagtgtcggacacgacacgtgtc 3025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 281
Target Start/End: Complemental strand, 4673538 - 4673440
Alignment:
Q  182 tatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||| ||||||| || |||||| |||||||||| ||||     |||| ||||| | ||||||||||||||||||| | |||||||||||||||    
T  4673538 tatgaagcacg-atacggatacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 37283926 - 37283823
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||||||| |||  |||| |||||| ||||||||||     | || | ||| | ||||||| ||| |||||||||||||||||||||||    
T  37283926 actatgaagcacggatacgtacatggacaccagacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaat 37283827  T
Q  280 tatg 283  Q
    ||||    
T  37283826 tatg 37283823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 288
Target Start/End: Original strand, 44067460 - 44067567
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||||||| || ||||| |||| ||||||| |||| ||||     |||| ||||| | ||||||||||| ||||| ||||||| ||||||||||    
T  44067460 ctatgaagcacggacacagacacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatt 44067559  T
Q  281 atgagtgt 288  Q
    || |||||    
T  44067560 ataagtgt 44067567  T

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Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 13844660 - 13844610
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||| ||||||||||| |||||||||||||| |||||||||||    
T  13844660 acgccgacactgctaataatttgagaaaatcacataattgagtgtaattat 13844610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 31236641 - 31236591
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||| ||||||||||| |||||||||||||||| |||||||||    
T  31236641 acgccgacactgctaataatttgagaaaatcacataattcaatgtaattat 31236591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 40332191 - 40332268
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtccca 319  Q
    |||||||  |||||||||| |||||||||||||||||||||||||  |||||     | |||| |||||||||||||||||||    
T  40332191 gacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgt-----cggtgtgggacacgacacgtgtccca 40332268  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 3951644 - 3951599
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||    
T  3951644 ctatgaagcacggatacggacacggacaccagatacgacacggaca 3951599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 4298950 - 4298901
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| |||||||||||||||||||||||||||| | ||||||||    
T  4298950 acgccgacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 14134707 - 14134744
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattat 14134744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 14731712 - 14731757
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||    
T  14731712 gacactgctaataatttgagaaaatcacataatttagtgtaattat 14731757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 24362317 - 24362216
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||||||| |||||||| || |||| | || ||||||| ||||     |||| ||||| | ||||||||||| | ||||||||||||||||||||||    
T  24362317 ctatgaagcacagatacggatacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaatt 24362218  T
Q  281 at 282  Q
    ||    
T  24362217 at 24362216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 24669428 - 24669477
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||| |||||||||||||  |||| |||||||||||||||||||    
T  24669428 acgctgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 31556992 - 31557040
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  31556992 acgccgacacagttaataatttgaaaa-atcacataattcagtgtaatta 31557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 34897093 - 34897130
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattat 34897130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 282
Target Start/End: Complemental strand, 4786445 - 4786352
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||| ||||| |||| |  ||||||||| ||||      ||| |||||  |||||||||| | ||||||||||||||||||||||||||    
T  4786445 atgaagcacggatacagacactgacaccgaacacgacactgaca------cgccgacaccattaataatttaagaaaatcacataattcagtgtaattat 4786352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 8342980 - 8343016
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 8343324 - 8343360
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8343324 taataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 20679446 - 20679398
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||| ||||    
T  20679446 taataatttgagaaaatcacatagttcagtgtaattataagtgtcggtg 20679398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 20873077 - 20873113
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||| ||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 30077438 - 30077402
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||| ||||||||||||||||||||||    
T  30077438 taataatttgaaaacatcacataattcagtgtaatta 30077402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 25192411 - 25192348
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgcc 295  Q
    |||| ||||| | ||||||||||||||| | |||||||||||| ||||||| ||||| ||||||    
T  25192411 acgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtgcc 25192348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 4611481 - 4611579
Alignment:
Q  184 tgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||| |||| ||||||  ||||| ||| ||||    | || | ||||| | ||||||||||| ||||| ||||||||||||||||||||    
T  4611481 tgaagcacggatacagacagagacattggacacaacatggaccccggcacaccgacaccgctaataatttgagaaaataacataattcagtgtaattat 4611579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 13437028 - 13436958
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||| ||||| | ||||||||||||||||||||||||||||  ||||| |  ||||| |||| ||||||||    
T  13437028 acgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcgg 13436958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 27101459 - 27101553
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtg 275  Q
    |||||||||| |||||| ||||| ||||||  | |||| | ||||||    |||| ||||| | |||||||||||||||||||||||||| ||||    
T  27101459 ctatgaagcatggatacagacaccgacatcgaatacgatatggacattgacacgccgacaccgctaataatttgaaaaaatcacataatttagtg 27101553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 27213542 - 27213592
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||||| ||||||||| | |||||||||||||||| |||||||||    
T  27213542 acgccgacactgctaataatttcagaaaatcacataattcactgtaattat 27213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 28642407 - 28642449
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||||| ||||||||||||||||| | ||||||||||||||||    
T  28642407 tgacacggttaataatttgaaaaatttacataattcagtgtaa 28642449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 39954343 - 39954293
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| ||||| | ||||||||||| |||||||||||||| |||||||||||    
T  39954343 acgccgacaccgctaataatttgagaaaatcacataatttagtgtaattat 39954293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 7658471 - 7658508
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  7658471 taataatttgagaaaattacataattcagtgtaattat 7658508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 12606888 - 12606843
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||||    
T  12606888 gacactgctaataatttgagaaaatcatataattcaatgtaattat 12606843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 13203649 - 13203686
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  13203649 taataatttgagaaaattacataattcagtgtaattat 13203686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 18069238 - 18069193
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    |||||||||||||||| |||||||||||  |||||| |||||||||    
T  18069238 ctatgaagcacggatatggacacagacacaagacacaacacggaca 18069193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 18964115 - 18964160
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||| ||||| ||||||||||| |||| |||||||||||||||||    
T  18964115 ctatgtagcacagatacggacacggacaccagacacgacacggaca 18964160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 22197858 - 22197757
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||||||   ||||| |||| | |||||||||| ||||     ||||  |||| | ||||||||||||||| |||||||||| ||||||||    
T  22197858 actatgaagcacggatctagacacggacaccggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaat 22197759  T
Q  280 ta 281  Q
    ||    
T  22197758 ta 22197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 22595989 - 22596038
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | ||||||||| ||||||| |||||||||||||||||||    
T  22595989 acgccgacacagctaataatttaaaaaaataacataattcagtgtaatta 22596038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 28385053 - 28385008
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||| ||||||||| |||| ||||| |||||||||||||||||||    
T  28385053 gacaccgttaataatatgaataaatctcataattcagtgtaattat 28385008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 28745498 - 28745539
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||||| ||||||||||||||| |||||||||||| |||||    
T  28745498 gacactgctaataatttgaaaaattcacataattcaatgtaa 28745539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Original strand, 29776036 - 29776081
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||| ||||||||||| |||||||| ||||||||| |||||||    
T  29776036 gacactgctaataatttgagaaaatcacgtaattcagtataattat 29776081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 30271355 - 30271306
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | |||| |||||||||||||||||||| |||||||||||    
T  30271355 acgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaatta 30271306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 31580186 - 31580141
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||| |||||||||||| | |||||||||||||| |||||||||||    
T  31580186 gacaatgttaataatttaagaaaatcacataattgagtgtaattat 31580141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 33405439 - 33405398
Alignment:
Q  241 ctgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    ||||||||||||||| |||| ||||||||| |||||||||||    
T  33405439 ctgttaataatttgagaaaaacacataatttagtgtaattat 33405398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 36107633 - 36107674
Alignment:
Q  232 acgctgacactgttaataatttg-aaaaaatcacataattca 272  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  36107633 acgctgacactgttcataatttgaaaaaaatcacataattca 36107674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 43737928 - 43737883
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||| ||||| |||| | |||||||||||||||    
T  43737928 ctatgaagcacggatacagacacggacaccggacacgacacggaca 43737883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 8798889 - 8798845
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||||||||| ||||| |||||||||| | |||||||    
T  8798889 acactgttaataatttgagaaaataacataattcaatataattat 8798845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 13018287 - 13018323
Alignment:
Q  243 gttaataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  13018287 gttaataatttgacaaaatcacataatttagtgtaat 13018323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgt 276  Q
    |||||| | ||||||||||| ||||||||||||||||||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

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Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 18407727 - 18407763
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||  |||||||||||||||||||||||||||    
T  18407727 taataattcaaaaaaatcacataattcagtgtaatta 18407763  T

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Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 279
Target Start/End: Original strand, 22493504 - 22493536
Alignment:
Q  247 ataatttgaaaaaatcacataattcagtgtaat 279  Q
    ||||||| |||||||||||||||||||||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaat 22493536  T

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Target: scaffold0652 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 575 - 477
Alignment:
Q  183 atgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||||| |||| |  ||||| ||||||||     |||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  575 atgaagcacggatacggacacggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaatta 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 23438 - 23494
Alignment:
Q  255 aaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacac 311  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  23438 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacac 23494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 23529 - 23562
Alignment:
Q  255 aaaaaatcacataattcagtgtaattatgagtgt 288  Q
    |||||||||||||||||||||||||||| |||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgt 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 317
Target Start/End: Original strand, 8742 - 8873
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    |||||||||| |||||||||||| |||| | |||||||||||||||     |||| ||||| | ||||||||||||||||||| || ||| |||||||||    
T  8742 ctatgaagcatggatacggacacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaatt 8841  T
Q  281 atgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    |  |||||     | ||||||||||||||||||||||    
T  8842 acaagtgt-----cggtgtcggacacgacacgtgtcc 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 70278 - 70353
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacacgacacgtgtcc 317  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||| |||||     | ||||||||||||||||||||||    
T  70278 gacacagttaataatttgaaaaaataacataattcagtgtaattataagtgt-----cggtgtcggacacgacacgtgtcc 70353  T

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Target: scaffold0044 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 53189 - 53245
Alignment:
Q  246 aataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcgg 53245  T

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Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 241589 - 241680
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgcc------gtgtcggacacgacacgtgtcc 317  Q
    |||| ||||| | |||||||||| ||||||||||||||| ||||||||||||||||| |||| |      ||||||||||||||||||||||    
T  241589 acgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtcc 241680  T

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Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 20167 - 20237
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||  |||||  ||| ||||||||    
T  20167 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 20237  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 3970 - 3864
Alignment:
Q  180 actatgaagcacggatacggacacagacatcagacacgacacg-----gacatacggacgctgacactgttaataatttgaaaaaatcacataattcagt 274  Q
    ||||||||||||||||| |||||| |||| |||||||||||||     ||||     | || ||||| ||||||||||| ||||||||||||||||||||    
T  3970 actatgaagcacggatatggacacggacaccagacacgacacgacacagacactgatatgccgacacggttaataatttaaaaaaatcacataattcagt 3871  T
Q  275 gtaatta 281  Q
    |||||||    
T  3870 gtaatta 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 51806 - 51855
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  51806 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 135371 - 135302
Alignment:
Q  237 gacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcggacac 306  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||  |||| |||| |||||| |||||    
T  135371 gacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgacac 135302  T

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Target: scaffold0361 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 14538 - 14574
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||||||||||||||||||||||||||||||||||||    
T  14538 taataatttgaaaaaatcacataattcagtgtaatta 14574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 263430 - 263366
Alignment:
Q  238 acactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgtcgg 302  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||| |||||  ||| ||||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcgg 263366  T

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Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 25828 - 25765
Alignment:
Q  236 tgacactgttaataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||||| |||||||||| || |||||||||||||| ||||||||||| ||||| |||| |||||    
T  25828 tgacacggttaataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 20985 - 21088
Alignment:
Q  179 tactatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaa 278  Q
    |||| |||| ||| |||||| |||| |||| |||||||||||||||||     | |||||||| ||||||||||||| |||||||||||| || || |||    
T  20985 tactgtgaaacacagatacgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataa 21084  T
Q  279 ttat 282  Q
    ||||    
T  21085 ttat 21088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 33427 - 33378
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | ||||||||||||||||| |||||||||||||||||||    
T  33427 acgccgacacagctaataatttgaaaaaataacataattcagtgtaatta 33378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 23775 - 23832
Alignment:
Q  243 gttaataatttgaaaa-aatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||| |||| |||||    
T  23775 gttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 17813 - 17764
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  17813 acgctgacacaactaataatttgaaaaaatcacataatttagtgtaatta 17764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 13408 - 13476
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg-ccgtgtcggacacgacacg 312  Q
    ||||||||||| ||||||||||||||||||| |||||  || || |||| | |||||||||||||||||    
T  13408 taataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacg 13476  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 21919 - 21851
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg-ccgtgtcggacacgacacg 312  Q
    ||||||||||| ||||||||||||||||||| |||||  || || |||| | |||||||||||||||||    
T  21919 taataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacg 21851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 44587 - 44539
Alignment:
Q  234 gctgacactgttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||| | ||| ||||||| ||||||||||||||||||||||||||    
T  44587 gctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattat 44539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 7362 - 7319
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgt 288  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||    
T  7362 taataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 225383 - 225276
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggacatacggacgctgacactgttaataatttgaaaaaatcacataattcagtgtaatt 280  Q
    ||||||| |||||| || ||||| |||| | |||||||||||||||     |||| ||||| | ||||||||||| ||||| ||||||| || |||||||    
T  225383 ctatgaaacacggacacagacacggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaatt 225284  T
Q  281 atgagtgt 288  Q
    || |||||    
T  225283 ataagtgt 225276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 9798 - 9744
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtgccgtgt 299  Q
    ||||||||||| |||||||| |||||||||||||||||  |||| |||| |||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgt 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 90850 - 90888
Alignment:
Q  244 ttaataatttgaaaaaatcacataattcagtgtaattat 282  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  90850 ttaataatttgagaaaatcatataattcagtgtaattat 90888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 1043 - 1076
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaa 278  Q
    ||||||||||||||||| ||||||||||||||||    
T  1043 taataatttgaaaaaattacataattcagtgtaa 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 19584 - 19655
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtg-taggtgccgtgtcggacacgacacgtgtcc 317  Q
    |||||||||||||| ||||||||||||||||||||||  |||| || || | |||| |||||||||||||||||    
T  19584 taataatttgaaaa-atcacataattcagtgtaattacaagtgttatgt-cggtgttggacacgacacgtgtcc 19655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 9842 - 9887
Alignment:
Q  181 ctatgaagcacggatacggacacagacatcagacacgacacggaca 226  Q
    ||||||||||||||||||||||| |||| | ||||||||| |||||    
T  9842 ctatgaagcacggatacggacacggacaccggacacgacatggaca 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 178870 - 178833
Alignment:
Q  245 taataatttgaaaaaatca-cataattcagtgtaatta 281  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  178870 taataatttgaaaaaatcatcataattcagtgtaatta 178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 192313 - 192264
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  192313 acgccgacaccgttaataatttgagaaaattacataattcggtgtaatta 192264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 92802 - 92851
Alignment:
Q  232 acgctgacactgttaataatttgaaaaaatcacataattcagtgtaatta 281  Q
    |||| ||||| | ||||||||||| ||||| |||||||||||||||||||    
T  92802 acgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 7083 - 7035
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaattatgagtgtaggtg 293  Q
    ||||||||||||||||| |||||||| ||| ||||||  ||||||||||    
T  7083 taataatttgaaaaaattacataatttagtataattacaagtgtaggtg 7035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 8018 - 8054
Alignment:
Q  245 taataatttgaaaaaatcacataattcagtgtaatta 281  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  8018 taataatttgaaaaaatcatataatacagtgtaatta 8054  T

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