View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16378_high_20 (Length: 507)
Name: NF16378_high_20
Description: NF16378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16378_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 460; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 18 - 502
Target Start/End: Original strand, 21829498 - 21829982
Alignment:
| Q |
18 |
gtttctcagagaaagtaaaaacattttcaggcacatgaacatattcaggaatagctgctgaccctcctcctcttttacttccaaatttccctttcttctt |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829498 |
gtttctcagagaaagtaaaaacattttcaggcacatgaacatattcaggaatagctgctgaccctcctcctcttttacttccaaatttccctttcttctt |
21829597 |
T |
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| Q |
118 |
aaccaaactatgagtatcaacannnnnnnctctttccatagaagaaagcaaagaaggatgaataggagtaagattcccttcctcacctctcatactcata |
217 |
Q |
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|||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829598 |
aaccaaactatgagtatcaacatttttttctctttccattgaagaaagcaaagaaggatgaataggagtaagattcccttcctcacctctcatactcata |
21829697 |
T |
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| Q |
218 |
acctcacattcttgaacttcccaaatatgtatcactttatcctcaccagcagtagccaaaaaccttccatccaaactaaacttcatagtccaaatacacc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829698 |
acctcacattcttgaacttcccaaatatgtatcactttatcctcaccagcagtagccaaaaaccttccatccaaactaaacttcatagtccaaatacacc |
21829797 |
T |
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| Q |
318 |
cttcatgtgcttgaaattcttgacataaatgcaaagctgaaagctctttttgtgatttcccactttgcctaaccttaacccatttattcttcccttgagt |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829798 |
cttcatgtgcttgaaattcttgacataaatgcaaagctgaaagctctttttgtgatttcccactttgcctaaccttaacccatttattcttcccttgagt |
21829897 |
T |
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| Q |
418 |
tttattttgatcaacaacttgtggtacaacaacttctctttcacgttcaccaacaattccacttgctacacctttaatattcttc |
502 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829898 |
tttattttgatcaacaacttgtggtacaacaacttctctttcacgttcaccaacaattccacttgctacacctttaatattcttc |
21829982 |
T |
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