View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16378_high_78 (Length: 280)

Name: NF16378_high_78
Description: NF16378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16378_high_78
NF16378_high_78
[»] chr1 (45 HSPs)
chr1 (4-280)||(7743212-7743489)
chr1 (74-192)||(31794222-31794340)
chr1 (74-193)||(16893393-16893512)
chr1 (74-192)||(6122794-6122912)
chr1 (94-192)||(12259260-12259358)
chr1 (74-192)||(21547438-21547556)
chr1 (81-192)||(51814494-51814605)
chr1 (74-192)||(25297772-25297890)
chr1 (117-190)||(33700774-33700847)
chr1 (117-192)||(8904414-8904489)
chr1 (121-196)||(9165200-9165275)
chr1 (78-193)||(44961764-44961879)
chr1 (74-181)||(52336732-52336839)
chr1 (74-192)||(4566548-4566665)
chr1 (74-192)||(6650595-6650713)
chr1 (74-168)||(12587294-12587387)
chr1 (75-193)||(17745216-17745333)
chr1 (74-192)||(40257399-40257517)
chr1 (100-189)||(15786304-15786393)
chr1 (74-194)||(10526821-10526941)
chr1 (100-192)||(36371470-36371562)
chr1 (78-193)||(50901580-50901695)
chr1 (117-192)||(8177183-8177258)
chr1 (117-192)||(16169979-16170054)
chr1 (117-192)||(19528328-19528403)
chr1 (78-193)||(52116743-52116858)
chr1 (74-192)||(952511-952629)
chr1 (77-191)||(44126396-44126510)
chr1 (74-150)||(7219876-7219952)
chr1 (75-159)||(9879471-9879555)
chr1 (113-189)||(9964441-9964517)
chr1 (117-185)||(17410238-17410306)
chr1 (74-157)||(1600250-1600333)
chr1 (117-192)||(2799862-2799937)
chr1 (74-153)||(31383756-31383835)
chr1 (78-185)||(42983336-42983443)
chr1 (74-193)||(48619167-48619286)
chr1 (74-192)||(21267951-21268069)
chr1 (74-139)||(2220025-2220090)
chr1 (74-194)||(1094523-1094643)
chr1 (89-133)||(8254854-8254898)
chr1 (74-194)||(14787294-14787414)
chr1 (78-150)||(15065007-15065079)
chr1 (74-106)||(28180845-28180877)
chr1 (117-193)||(51703778-51703854)
[»] chr7 (43 HSPs)
chr7 (78-192)||(45709670-45709784)
chr7 (74-187)||(41519223-41519335)
chr7 (74-193)||(15137552-15137671)
chr7 (75-192)||(20335790-20335907)
chr7 (78-194)||(24513795-24513911)
chr7 (74-192)||(30579335-30579453)
chr7 (117-193)||(26459411-26459487)
chr7 (74-192)||(41487362-41487477)
chr7 (74-193)||(43590906-43591025)
chr7 (78-193)||(48771937-48772052)
chr7 (74-192)||(2446308-2446426)
chr7 (74-192)||(25590611-25590729)
chr7 (117-194)||(18363694-18363771)
chr7 (117-193)||(22760862-22760938)
chr7 (78-194)||(41519072-41519188)
chr7 (74-153)||(9183149-9183228)
chr7 (74-189)||(15905632-15905746)
chr7 (117-192)||(23552118-23552193)
chr7 (74-193)||(30442487-30442604)
chr7 (81-188)||(42711962-42712069)
chr7 (123-194)||(42836008-42836079)
chr7 (74-192)||(17040970-17041088)
chr7 (78-191)||(35513467-35513580)
chr7 (117-194)||(39631842-39631919)
chr7 (89-193)||(7801179-7801283)
chr7 (144-191)||(22927477-22927524)
chr7 (117-192)||(23301603-23301678)
chr7 (117-192)||(43215184-43215259)
chr7 (74-189)||(43663053-43663168)
chr7 (74-152)||(7309396-7309473)
chr7 (74-151)||(2882991-2883067)
chr7 (74-139)||(21558181-21558246)
chr7 (74-154)||(27313692-27313772)
chr7 (117-185)||(37085550-37085618)
chr7 (126-193)||(25021345-25021412)
chr7 (117-192)||(25655229-25655304)
chr7 (117-192)||(35119383-35119458)
chr7 (74-133)||(37473673-37473732)
chr7 (75-133)||(4572256-4572314)
chr7 (124-190)||(21854550-21854616)
chr7 (74-190)||(29385701-29385817)
chr7 (78-190)||(44628146-44628257)
chr7 (165-193)||(45559199-45559227)
[»] chr3 (42 HSPs)
chr3 (74-198)||(10499067-10499191)
chr3 (74-185)||(2667869-2667980)
chr3 (91-193)||(14186647-14186748)
chr3 (74-154)||(49397499-49397579)
chr3 (74-193)||(14339609-14339728)
chr3 (74-193)||(51903836-51903955)
chr3 (74-192)||(11642167-11642285)
chr3 (78-192)||(36720381-36720495)
chr3 (95-192)||(4222141-4222238)
chr3 (74-194)||(10445097-10445218)
chr3 (117-194)||(49494147-49494224)
chr3 (74-159)||(52769941-52770026)
chr3 (77-185)||(4844472-4844580)
chr3 (77-185)||(4870168-4870276)
chr3 (113-192)||(203090-203169)
chr3 (78-192)||(2597181-2597296)
chr3 (74-185)||(8075085-8075196)
chr3 (74-193)||(8170671-8170790)
chr3 (78-193)||(16991541-16991656)
chr3 (117-192)||(27093362-27093437)
chr3 (117-192)||(30311306-30311381)
chr3 (74-192)||(31520563-31520681)
chr3 (90-192)||(31788945-31789046)
chr3 (74-192)||(46518628-46518746)
chr3 (4-45)||(40864891-40864932)
chr3 (74-191)||(47454575-47454692)
chr3 (74-139)||(54990755-54990820)
chr3 (117-193)||(28703405-28703481)
chr3 (81-153)||(33899653-33899725)
chr3 (74-189)||(13808843-13808958)
chr3 (113-192)||(15048058-15048137)
chr3 (117-192)||(37788466-37788541)
chr3 (76-159)||(44743815-44743898)
chr3 (74-193)||(12761511-12761630)
chr3 (117-192)||(16354893-16354968)
chr3 (118-184)||(11612307-11612373)
chr3 (165-194)||(8796141-8796170)
chr3 (74-151)||(44069799-44069876)
chr3 (74-198)||(7673263-7673387)
chr3 (74-126)||(7973622-7973674)
chr3 (117-193)||(35111179-35111255)
chr3 (74-130)||(36015510-36015566)
[»] scaffold0258 (1 HSPs)
scaffold0258 (74-192)||(15281-15399)
[»] chr5 (31 HSPs)
chr5 (74-192)||(16773807-16773925)
chr5 (74-193)||(29075780-29075899)
chr5 (74-193)||(6844728-6844847)
chr5 (74-192)||(22737082-22737200)
chr5 (77-194)||(17028225-17028342)
chr5 (100-193)||(25627056-25627149)
chr5 (74-198)||(3252247-3252371)
chr5 (77-193)||(14495766-14495882)
chr5 (74-193)||(8278233-8278352)
chr5 (74-192)||(22020820-22020938)
chr5 (78-151)||(29173531-29173604)
chr5 (74-192)||(21589288-21589406)
chr5 (117-192)||(87424-87499)
chr5 (74-185)||(1410619-1410728)
chr5 (89-188)||(43241655-43241754)
chr5 (74-153)||(43442235-43442314)
chr5 (74-139)||(24907542-24907607)
chr5 (117-189)||(18437088-18437160)
chr5 (121-193)||(19043457-19043529)
chr5 (117-192)||(14285161-14285236)
chr5 (117-188)||(16436622-16436692)
chr5 (75-192)||(18169793-18169905)
chr5 (117-192)||(21549138-21549213)
chr5 (117-192)||(26078052-26078127)
chr5 (121-192)||(30883203-30883274)
chr5 (117-192)||(34984806-34984881)
chr5 (75-133)||(35705045-35705103)
chr5 (165-194)||(7918518-7918547)
chr5 (117-192)||(5390853-5390926)
chr5 (74-130)||(10054109-10054165)
chr5 (117-189)||(14804671-14804743)
[»] chr8 (30 HSPs)
chr8 (78-192)||(968362-968476)
chr8 (84-193)||(23361617-23361726)
chr8 (74-192)||(16852340-16852458)
chr8 (74-192)||(44780072-44780190)
chr8 (74-195)||(3624577-3624697)
chr8 (74-193)||(11819775-11819894)
chr8 (74-190)||(2203494-2203610)
chr8 (117-192)||(19703488-19703563)
chr8 (78-192)||(20994419-20994534)
chr8 (74-192)||(8059632-8059750)
chr8 (74-192)||(8484999-8485117)
chr8 (74-192)||(18540298-18540416)
chr8 (74-192)||(28783060-28783178)
chr8 (74-192)||(29431011-29431129)
chr8 (74-191)||(29858007-29858124)
chr8 (74-192)||(4830487-4830605)
chr8 (117-194)||(27750728-27750805)
chr8 (100-192)||(6569755-6569847)
chr8 (89-181)||(35690037-35690129)
chr8 (117-192)||(3826778-3826853)
chr8 (74-193)||(11518835-11518954)
chr8 (121-192)||(30483889-30483960)
chr8 (117-192)||(35641902-35641977)
chr8 (77-151)||(6536561-6536635)
chr8 (74-108)||(7347921-7347955)
chr8 (120-194)||(23874386-23874460)
chr8 (99-185)||(42740501-42740587)
chr8 (75-192)||(3058009-3058125)
chr8 (74-159)||(3305146-3305231)
chr8 (74-154)||(16843753-16843832)
[»] chr6 (15 HSPs)
chr6 (78-192)||(33549104-33549218)
chr6 (74-191)||(6758380-6758497)
chr6 (77-193)||(12633008-12633124)
chr6 (78-192)||(12234469-12234583)
chr6 (74-192)||(21418470-21418588)
chr6 (74-192)||(31622949-31623067)
chr6 (74-193)||(1056643-1056762)
chr6 (117-192)||(12188304-12188379)
chr6 (73-192)||(14557962-14558080)
chr6 (74-193)||(30127399-30127518)
chr6 (117-193)||(11423565-11423641)
chr6 (78-193)||(3715451-3715566)
chr6 (74-181)||(28363948-28364055)
chr6 (76-190)||(32613100-32613214)
chr6 (89-133)||(12216803-12216847)
[»] chr4 (37 HSPs)
chr4 (74-192)||(7949412-7949530)
chr4 (74-194)||(28635694-28635814)
chr4 (74-185)||(49576852-49576963)
chr4 (78-192)||(21660106-21660220)
chr4 (78-192)||(21668870-21668984)
chr4 (117-193)||(37109352-37109428)
chr4 (117-192)||(19680789-19680864)
chr4 (74-192)||(8030162-8030280)
chr4 (74-172)||(51954134-51954232)
chr4 (117-193)||(19238578-19238654)
chr4 (78-194)||(31826607-31826723)
chr4 (74-193)||(37274417-37274537)
chr4 (74-194)||(46545709-46545829)
chr4 (73-192)||(37720171-37720290)
chr4 (78-192)||(18404845-18404959)
chr4 (78-192)||(51250484-51250598)
chr4 (117-194)||(47044715-47044792)
chr4 (81-193)||(9936926-9937038)
chr4 (117-193)||(31759659-31759735)
chr4 (74-193)||(45060977-45061096)
chr4 (81-192)||(55427165-55427276)
chr4 (117-192)||(2622396-2622475)
chr4 (81-175)||(13015444-13015538)
chr4 (78-193)||(37443701-37443813)
chr4 (144-192)||(27965538-27965586)
chr4 (117-177)||(38869783-38869843)
chr4 (117-192)||(4249177-4249252)
chr4 (119-194)||(9241028-9241103)
chr4 (117-192)||(39509070-39509145)
chr4 (74-188)||(13901746-13901860)
chr4 (113-159)||(24124052-24124098)
chr4 (74-188)||(24234649-24234762)
chr4 (75-133)||(47386750-47386808)
chr4 (77-130)||(30584783-30584836)
chr4 (74-175)||(30938177-30938278)
chr4 (117-189)||(7292799-7292871)
chr4 (113-169)||(42644907-42644963)
[»] scaffold0118 (1 HSPs)
scaffold0118 (74-193)||(41591-41710)
[»] chr2 (43 HSPs)
chr2 (74-192)||(29503271-29503388)
chr2 (78-192)||(42327357-42327471)
chr2 (74-192)||(1435064-1435181)
chr2 (74-192)||(42602554-42602672)
chr2 (74-192)||(11251087-11251205)
chr2 (74-192)||(37480075-37480193)
chr2 (117-194)||(4438980-4439057)
chr2 (117-192)||(14500277-14500352)
chr2 (78-193)||(28846690-28846805)
chr2 (117-192)||(34041589-34041664)
chr2 (117-192)||(39714992-39715067)
chr2 (78-188)||(3001383-3001493)
chr2 (74-159)||(25637184-25637269)
chr2 (74-139)||(38854420-38854485)
chr2 (128-192)||(1729816-1729880)
chr2 (117-193)||(23052524-23052600)
chr2 (74-150)||(33582015-33582091)
chr2 (117-193)||(40416391-40416467)
chr2 (74-192)||(7798994-7799111)
chr2 (117-191)||(16918579-16918653)
chr2 (78-192)||(21195638-21195752)
chr2 (82-192)||(26545840-26545950)
chr2 (74-192)||(29197334-29197452)
chr2 (117-194)||(11062358-11062435)
chr2 (79-192)||(19244109-19244222)
chr2 (74-139)||(38856120-38856185)
chr2 (117-201)||(5147680-5147764)
chr2 (75-131)||(31573600-31573656)
chr2 (74-150)||(35203341-35203417)
chr2 (117-192)||(42922414-42922490)
chr2 (113-192)||(11738041-11738120)
chr2 (89-192)||(35916086-35916189)
chr2 (100-194)||(13803493-13803587)
chr2 (74-184)||(21213777-21213887)
chr2 (74-139)||(2311777-2311842)
chr2 (93-185)||(9776313-9776403)
chr2 (117-194)||(12994377-12994454)
chr2 (117-194)||(32687479-32687556)
chr2 (74-191)||(37755929-37756046)
chr2 (74-131)||(37971956-37972013)
chr2 (74-151)||(41908596-41908673)
chr2 (166-194)||(16381704-16381732)
chr2 (117-192)||(33569859-33569935)
[»] scaffold0211 (1 HSPs)
scaffold0211 (77-192)||(24053-24168)
[»] scaffold0032 (1 HSPs)
scaffold0032 (78-192)||(112282-112396)
[»] scaffold0194 (1 HSPs)
scaffold0194 (91-188)||(13021-13118)
[»] scaffold0122 (1 HSPs)
scaffold0122 (74-185)||(6880-6988)
[»] scaffold0002 (1 HSPs)
scaffold0002 (113-189)||(94968-95044)
[»] scaffold0070 (1 HSPs)
scaffold0070 (74-192)||(42479-42596)
[»] scaffold0299 (1 HSPs)
scaffold0299 (117-186)||(11534-11603)
[»] scaffold0115 (1 HSPs)
scaffold0115 (74-139)||(42622-42687)
[»] scaffold0471 (1 HSPs)
scaffold0471 (113-159)||(8639-8685)
[»] scaffold0126 (1 HSPs)
scaffold0126 (74-175)||(25305-25406)


Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 4 - 280
Target Start/End: Original strand, 7743212 - 7743489
Alignment:
Q  4 atgtcgaagcagataaagaagctcatgttagagaggtattgtattgtgtcaaatatctactgnnnnnnn-gtttgaagaagctaagttagcccacctaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  7743212 atgtcgaagcagataaagaagctcatgttagagaggtattgtattgtgtcaaatatctactgttttttttgtttgaagaagctaagttagcccacctaaa 7743311  T
Q  103 ttgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatgaaatatc 202  Q
    |||||||  ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7743312 ttgacattttagataatcgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggttatgaaatatc 7743411  T
Q  203 tattgttgtttatcacacatacatcatatgatagaattgtcaacnnnnnnnnacatgtgtttcaggcttgcaaaggtc 280  Q
    ||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||||||||||||||    
T  7743412 tattgttgtttatcacacatacatcatatgataaaattgtcaacttttttttacatgtgtttcaggcttgcaaaggtc 7743489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 31794222 - 31794340
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| ||||||||| |  ||  ||||||||   |||||| ||||| || ||||||||||| |||| ||  |||||||||    
T  31794222 tttgaagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccact 31794321  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  31794322 aggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 16893512 - 16893393
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||||||||||| ||||| ||  ||||||||||||| | ||  |||||||      
T  16893512 tttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaac 16893413  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||| ||||||||||||||||    
T  16893412 aggtcaacccaagtgggtta 16893393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 6122912 - 6122794
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  6122912 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 6122813  T
Q  174 aggccaacccaagtgggtt 192  Q
    ||| |||||||| ||||||    
T  6122812 agggcaacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 12259358 - 12259260
Alignment:
Q  94 ccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||| |||||||||||   || |||||||| |||||| | ||||| || |||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  12259358 ccacccaaattgacatcggtgagaatcgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 21547438 - 21547556
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||| |||  |||||||||||||||| ||||  ||| |||||||||||| |||| ||||| || ||| ||||||  |||| ||  |||||||||    
T  21547438 tttgaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccact 21547537  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||| ||||    
T  21547538 aggccaacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 51814605 - 51814494
Alignment:
Q  81 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 180  Q
    ||||||| |||||||||| |||||| || |  ||| ||||||||||||||||| ||||| || ||||||| || ||| | ||| |||||||  |||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaa 51814506  T
Q  181 cccaagtgggtt 192  Q
    ||||||||||||    
T  51814505 cccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 25297890 - 25297772
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| |||||||||||||||  |   || |||| ||||| |||||| ||||| || ||||||| || ||||  ||| |||||||||    
T  25297890 tttgaagaagctaaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccact 25297791  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||||||||||||||    
T  25297790 agaccaacccaagtgggtt 25297772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 33700774 - 33700847
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 190  Q
    ||||||||||||||||| ||||| || |||||||||| || || ||  ||||||||||||||||||||||||||    
T  33700774 aatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 8904489 - 8904414
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||| |||||||| ||||| || ||||||| || ||||| ||| ||||| ||||||||||||||||||||||    
T  8904489 aatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 9165200 - 9165275
Alignment:
Q  121 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatga 196  Q
    ||||||||||| | ||||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||||||    
T  9165200 gaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttatga 9165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 44961879 - 44961764
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||||||||| |||||||||    ||| ||||||||||||||||  ||||| || |||||||  ||||| | || |||||||||  | |    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgac 44961780  T
Q  178 caacccaagtgggtta 193  Q
    ||||||||||||||||    
T  44961779 caacccaagtgggtta 44961764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 181
Target Start/End: Original strand, 52336732 - 52336839
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||  ||| |||||||| | ||||||||| |  |||||||||||||||||| ||  |||| || |||||||||| ||||| ||  |||||||||    
T  52336732 tttgaagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccact 52336831  T
Q  174 aggccaac 181  Q
    ||||||||    
T  52336832 aggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 4566665 - 4566548
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  || ||| | ||||||||||||  ||| ||||||||||||||||  ||||| || ||||||||||  | || ||  |||| ||||    
T  4566665 tttgaagaagctaaactaaccc-cttaaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcact 4566567  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  4566566 aggccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 6650713 - 6650595
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  ||  ||||||||||||||| |  ||| ||||||||||||||| | ||||| || || ||||||  ||||| ||  |||||||||    
T  6650713 tttgaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccact 6650614  T
Q  174 aggccaacccaagtgggtt 192  Q
    ||||||||| || ||||||    
T  6650613 aggccaacctaattgggtt 6650595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 12587387 - 12587294
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaata 168  Q
    |||||||||||||| ||||||||||||||||| || |  ||| ||||||||||||||||| ||||| || ||||||| || ||||| ||| ||||    
T  12587387 tttgaagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 17745216 - 17745333
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 174  Q
    ||||||||||||| ||| || ||||||||||||| |  ||| |||||||| |||||||| ||||| || ||||| | ||  |||| ||  ||||||||||    
T  17745216 ttgaagaagctaaattaacc-acctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccacta 17745314  T
Q  175 ggccaacccaagtgggtta 193  Q
    |||||||||||||| ||||    
T  17745315 ggccaacccaagtgcgtta 17745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 40257517 - 40257399
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  ||||||||| ||||||||| |  | | ||| |||| |||||||| ||||| || ||||||||||  || | ||  ||||||||     
T  40257517 tttgaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccacc 40257418  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  40257417 aggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 189
Target Start/End: Original strand, 15786304 - 15786393
Alignment:
Q  100 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 189  Q
    ||||||||| |  ||| ||||||||||||||||| ||||| || |||||||||| ||||| ||  ||||| ||||| |||||||||||||    
T  15786304 aaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 10526941 - 10526821
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| |||||| ||||||||  |  ||| ||||||| ||||||||| ||||| || || |||||||  |||| ||  |||||||||    
T  10526941 tttgaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T
Q  174 aggccaacccaagtgggttat 194  Q
     | ||||||||| ||||||||    
T  10526841 ggaccaacccaaatgggttat 10526821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 36371562 - 36371470
Alignment:
Q  100 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||| ||||  ||| |||||||||| |||||| ||||| || ||||||||||  | || ||  ||||||||||||||||||||||||||||    
T  36371562 aaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 50901695 - 50901580
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaat-accactagg 176  Q
    |||||||||| ||||||||||||||||| || |  ||| |||||||  |||||||| ||||| || |||||| |||  |||| ||  ||| |||||||||    
T  50901695 aagaagctaaattagcccacctaaattggca-ctgagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactagg 50901597  T
Q  177 ccaacccaagtgggtta 193  Q
    |||||||||||||||||    
T  50901596 ccaacccaagtgggtta 50901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 8177183 - 8177258
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||| |||| ||||| || |||||||||| ||||| ||  ||||||||||||||||| ||| ||||||    
T  8177183 aatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 16169979 - 16170054
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||| |||| ||||| || ||||||||||  |||| ||| |||||||| |||| ||||||||||||||    
T  16169979 aatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 19528328 - 19528403
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || |||||||  | ||||| ||  |||||||| |||||||||||||||||||    
T  19528328 aatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 193
Target Start/End: Original strand, 52116743 - 52116858
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| ||||||||||| ||||| ||     || ||| ||||||||||| | ||||| || ||||||||||| |||| ||  |||||||| ||||    
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 52116842  T
Q  178 caacccaagtgggtta 193  Q
    |||||||| |||||||    
T  52116843 caacccaactgggtta 52116858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 952629 - 952511
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||| |||||||| ||| ||||||||||||||||||   || |||| |||||||||| | ||||| || ||||||||||  |||| ||  || |||||     
T  952629 tttgacgaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccacc 952530  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||| ||||||||||    
T  952529 agaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 44126510 - 44126396
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    ||||||||||| |||||| |||||||||| ||    ||| |||| || ||||||||| | ||| || ||||||||||  ||||  || |||||||| |||    
T  44126510 gaagaagctaaattagcctacctaaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccagg 44126411  T
Q  177 ccaacccaagtgggt 191  Q
    |||||||||||||||    
T  44126410 ccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 7219876 - 7219952
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 150  Q
    |||||||||||||| |||| ||||||||||||  |||  ||| ||||||||||||||| | ||||| || |||||||    
T  7219876 tttgaagaagctaaattagtccacctaaattggtatcaaagagaatcgaacctgagacttcgaggaggagcacactc 7219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 9879555 - 9879471
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 159  Q
    ||||||||| ||| |||||||||| ||||||||||   ||||||||||| |||||||||  |||||||  |||||| || |||||    
T  9879555 ttgaagaagttaaattagcccacccaaattgacataagagataatcgaatctgagacctcaaggaagagtacactctcagatccc 9879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 9964517 - 9964441
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 189  Q
    |||||||| |||||||||| | |||||||| |||||||||| ||||| ||| |||| ||  |||| |||||||||||    
T  9964517 agataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 17410306 - 17410238
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 185  Q
    |||||||| ||||| || ||||| ||||||||||||| ||||| |   |||||||||||||||||||||    
T  17410306 aatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 1600250 - 1600333
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatc 157  Q
    ||||||||||||||||||| ||| | ||||||||| |  ||| |||||||||||| || |  |||| || ||||||||||||||    
T  1600250 tttgaagaagctaagttagtccatccaaattgacaccagagagaatcgaacctgaaactttaaggaggagcacactcccaaatc 1600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 2799937 - 2799862
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || |||||||||| ||| | ||   ||||||||||||||| | |||||||||    
T  2799937 aatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 31383756 - 31383835
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 153  Q
    |||||||||| |||||||||||||| |||||| || |  ||| ||||||||||||||||   |||| || ||||||||||    
T  31383756 tttgaagaaggtaagttagcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactccca 31383835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 42983336 - 42983443
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||| |||| ||||||| || |  ||| ||||||||||  |||||  |||| ||||||||||||| ||| | ||| |||||||| | ||    
T  42983336 aagaagctaaattagtccacttaaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccatgc 42983435  T
Q  178 caacccaa 185  Q
    ||||||||    
T  42983436 caacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 48619167 - 48619286
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||| ||| |||| ||||  ||||||||| |  ||||||| |||||||||| || |||||| | ||||||||||| || | ||| ||||||||     
T  48619167 tttgaagaagttaaattagtccactcaaattgacaccggagataatagaacctgagatcttgaggaaaaacacactcccaagtctcaagtcaataccacc 48619266  T
Q  174 aggccaacccaagtgggtta 193  Q
    |   ||||| ||||||||||    
T  48619267 atatcaacctaagtgggtta 48619286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 21267951 - 21268069
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||   ||||||  | |  ||| |||| ||||  |||||||||||| || ||||||||||| |||| ||  ||||| |||    
T  21267951 tttgaagaagctaaattagcccaaaaaaattggaaccagagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatactact 21268050  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||| ||||||||||    
T  21268051 agcccaactcaagtgggtt 21268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 2220090 - 2220025
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    ||||||||| |||| ||||||||  |||||||||||   ||| ||||||||||||||||| |||||    
T  2220090 tttgaagaaactaaattagcccatttaaattgacattggagagaatcgaacctgagacctcgagga 2220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 1094643 - 1094523
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||| ||| ||||||||||||||||| || |  ||| |||||||  |||||||| | ||| || ||||||| ||  | || ||| |||||||      
T  1094643 tttgaagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaataccaac 1094544  T
Q  174 aggccaacccaagtgggttat 194  Q
    |  ||||||||||||||||||    
T  1094543 aaaccaacccaagtgggttat 1094523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 8254854 - 8254898
Alignment:
Q  89 ttagcccacctaaattgacatcctagataatcgaacctgagacct 133  Q
    |||||||||| ||||||||| |  |||||||||||||||||||||    
T  8254854 ttagcccaccgaaattgacaccagagataatcgaacctgagacct 8254898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 194
Target Start/End: Original strand, 14787294 - 14787414
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  || ||||| |||||||| ||   ||| |||||||||||| |||| |||||  | ||||||| ||  || | ||| |||||||||    
T  14787294 tttgaagaagctaaactaacccacttaaattgatattagagagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccact 14787393  T
Q  174 aggccaacccaagtgggttat 194  Q
    ||| |||| |||||| |||||    
T  14787394 aggtcaactcaagtgagttat 14787414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 15065079 - 15065007
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 150  Q
    |||||||||| |||||||||| ||||||||| |   || ||| ||||||||||||| ||||| || |||||||    
T  15065079 aagaagctaaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgaggatgagcacactc 15065007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 28180877 - 28180845
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattga 106  Q
    ||||||||| |||||||||||||||||||||||    
T  28180877 tttgaagaaactaagttagcccacctaaattga 28180845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 51703854 - 51703778
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    |||||||||||| || | ||||| || |||||||||| || || ||  ||||||||||| ||||||||| |||||||    
T  51703854 aatcgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtta 51703778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 45709670 - 45709784
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    ||||||||||||||||||||||||||||  |||  ||||||||||||||||||||| ||||| || ||||||| || ||||| || ||||||||||||||    
T  45709670 aagaagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggc 45709769  T
Q  178 caacccaagtgggtt 192  Q
    |||||||| ||||||    
T  45709770 caacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 41519223 - 41519335
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||||||||||||| |  ||| || |||||||||||||| ||||| || |||||||| ||||||| ||| |||||||||    
T  41519223 tttgaagaagctaaattagcccacctaaattgaca-cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccact 41519321  T
Q  174 aggccaacccaagt 187  Q
    ||||||||||||||    
T  41519322 aggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 15137671 - 15137552
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||| |||| |||||||||| ||||||||| |  ||| |||| |||||||||||| ||||| || |||||||| ||||||| ||| | ||||||     
T  15137671 tttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccacc 15137572  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||||||||||||||||||||    
T  15137571 aggccaacccaagtgggtta 15137552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 20335790 - 20335907
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 174  Q
    ||||||||| ||| |||||||| | |||||||||||   || ||||||||||||||||| ||||| || ||||||||||| |||| ||  |||||| |||    
T  20335790 ttgaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctcta 20335889  T
Q  175 ggccaacccaagtgggtt 192  Q
    | ||||||||||||||||    
T  20335890 gaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 24513911 - 24513795
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||| ||| |||||||||| |||||||||||   || |||||||||||||||||  ||||  |  ||||||||||||| | ||  |||||||||||||    
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggc 24513812  T
Q  178 caacccaagtgggttat 194  Q
    |||||||||||||||||    
T  24513811 caacccaagtgggttat 24513795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 30579453 - 30579335
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||||||||| || |  ||| ||||||||||||||||| ||||| |   |||||||||  || | ||  ||||||||     
T  30579453 tttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccacc 30579354  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  30579353 aggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 26459411 - 26459487
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  26459411 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 41487477 - 41487362
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||||||||| || |    | ||||||||||||||||| ||||| ||  |||||||||| |||| ||  ||||||||     
T  41487477 tttgaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgagga-ga--acactcccaagtcccaagccaataccacc 41487381  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  41487380 aggccaacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 43591025 - 43590906
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||| ||||| ||     || ||||||||||||||| | ||||| || ||||||||||| |||| ||  ||||||||     
T  43591025 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccacc 43590926  T
Q  174 aggccaacccaagtgggtta 193  Q
    |||||||||||| |||||||    
T  43590925 aggccaacccaactgggtta 43590906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 48772052 - 48771937
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||||||||||||||||  |     ||||||||||||||||||||  |||| || |||||||||| ||||| ||  |||||||| | ||    
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagc 48771953  T
Q  178 caacccaagtgggtta 193  Q
    ||||||||||||||||    
T  48771952 caacccaagtgggtta 48771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 2446426 - 2446308
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||||||| | || |  ||| |||||||| ||||| || ||||| || ||||||||||| |||| ||  |||||||      
T  2446426 tttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatc 2446327  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||||||||||||||    
T  2446326 agaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 25590729 - 25590611
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||| ||||||| ||||| || |||||||||| ||| | ||  |||||||      
T  25590729 tttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaac 25590630  T
Q  174 aggccaacccaagtgggtt 192  Q
    ||| |||||||||||||||    
T  25590629 aggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 18363771 - 18363694
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||| |||||||||||| ||||| || |||||||||||||| | ||   |||||||||||||||||||||||||||||    
T  18363771 aatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttat 18363694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 22760938 - 22760862
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||| |||||||| || |||||||||||||||||    
T  22760938 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtta 22760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 41519072 - 41519188
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||||||||| ||||||||| |  ||||||||||| ||||||||| ||| | || |||||||  ||||||| ||  | || ||||||||    
T  41519072 aagaagctaaattagcccacccaaattgacaccggagataatcgaatctgagaccttgagaaggagcacactcttaaatcccaagccagtatcactaggc 41519171  T
Q  178 caacccaagtgggttat 194  Q
    ||||| |||||| ||||    
T  41519172 caaccaaagtggattat 41519188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 9183149 - 9183228
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 153  Q
    ||||||||| |||| |||||||||| ||||||||| |  ||||||||||||||||||| | ||||| || ||||||||||    
T  9183149 tttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactccca 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 15905632 - 15905746
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| |||||| ||||||||||    || |||||||||||||||||| |||| || ||||||||||  |||| ||  |||||| |     
T  15905632 tttgaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgcc 15905730  T
Q  174 aggccaacccaagtgg 189  Q
    ||||||||||||||||    
T  15905731 aggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 23552193 - 23552118
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||| |||||||| ||||| || ||||||||||  |||| ||| |||| |||||||||||||||||||||||    
T  23552193 aatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 30442604 - 30442487
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||||||| ||| |||||| |||||||| ||| ||| |||||||||| |||||| ||||| || || |||||||  |||| ||  |||||||||    
T  30442604 tttgaataagctaaattaacccacccaaattgac-tcc-agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccact 30442507  T
Q  174 aggccaacccaagtgggtta 193  Q
     |||||||||||||||||||    
T  30442506 gggccaacccaagtgggtta 30442487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 42712069 - 42711962
Alignment:
Q  81 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 180  Q
    ||||||| ||||||||||||||||||||     || |||||||| |||||||| ||||| || ||||||||||  | || || ||||||||||| |||||    
T  42712069 aagctaaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaa 42711970  T
Q  181 cccaagtg 188  Q
    ||||||||    
T  42711969 cccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 42836008 - 42836079
Alignment:
Q  123 acctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    ||||||| ||| |||||||| ||||||||||  |||| ||  ||||||||||||||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 42836079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 17040970 - 17041088
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||  |||||| |||||| ||    ||| ||||||||||||||||| ||||| || |||||| ||| ||||| ||  ||| |||||    
T  17040970 tttgaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccact 17041069  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||||||||||||||    
T  17041070 agaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 35513580 - 35513467
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||| |||||||||||  ||||  ||| |||||||| |||||  | ||||| || ||||||| ||| |||| ||  |||||||||||||    
T  35513580 aagaagctaaattagtccacctaaattaccatcggagaaaatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggc 35513481  T
Q  178 caacccaagtgggt 191  Q
    |||||||| |||||    
T  35513480 caacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 39631919 - 39631842
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    ||||||||||||||||| ||||| || |  |||||||  |||| ||  ||||||||||||||||||||||||||||||    
T  39631919 aatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 7801283 - 7801179
Alignment:
Q  89 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 188  Q
    ||||||||| ||||||||||||  ||    ||||||||||||||| || || || ||||||||||  |||| ||| |||||||| ||||||| |||||||    
T  7801283 ttagcccacttaaattgacatcggaggggttcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtg 7801184  T
Q  189 ggtta 193  Q
    |||||    
T  7801183 ggtta 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 22927524 - 22927477
Alignment:
Q  144 cacactcccaaatccctagttaataccactaggccaacccaagtgggt 191  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||    
T  22927524 cacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 23301603 - 23301678
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||| ||| ||||||||  |||| || ||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  23301603 aatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 43215259 - 43215184
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || |||||||| |  |||| ||  ||||||||||| ||||||||||||||||    
T  43215259 aatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 43663053 - 43663168
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||| ||||| ||||||| | |  ||| | |||||||||||| || ||||| |||||| |||| |  |||| ||| |||||||      
T  43663053 tttgaagaagctaaattagtccacccaaattgataccggagagattcgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatc 43663152  T
Q  174 aggccaacccaagtgg 189  Q
    ||||||||||||||||    
T  43663153 aggccaacccaagtgg 43663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 7309473 - 7309396
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccc 152  Q
    |||||||||||||| ||||||||| |||||||||| |  ||| |||||||| |||||||| ||||| || |||||||||    
T  7309473 tttgaagaagctaaattagcccacttaaattgaca-cggagagaatcgaacttgagacctcgaggaggagcacactccc 7309396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 2883067 - 2882991
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 151  Q
    |||||||||||||||| ||||||||||||||| || |  ||| ||| ||||||||||||| ||||| || ||||||||    
T  2883067 tttgaagaagctaagt-agcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 21558246 - 21558181
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    |||||||||||||| ||| ||||||||||||| || |  ||| ||||||||||||||||| |||||    
T  21558246 tttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgagga 21558181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 27313692 - 27313772
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 154  Q
    |||||||||||||| ||||| ||||||||||| ||||  ||| ||||||| |||| |||| ||||| || || ||||||||    
T  27313692 tttgaagaagctaaattagctcacctaaattggcatcagagagaatcgaatctgaaaccttgaggaggagcaaactcccaa 27313772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 37085550 - 37085618
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 185  Q
    |||||||||||| |||| ||||| || |||||||||||||||| ||  |||||||| | ||||||||||    
T  37085550 aatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgccaacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 25021345 - 25021412
Alignment:
Q  126 tgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    |||||| | ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 25655229 - 25655304
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||| |||| ||||| || ||||||| || ||||| ||| ||||||||||  |||||||| |||||||    
T  25655229 aatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtt 25655304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 35119458 - 35119383
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||| | || ||||| || || || |||| ||||| ||| ||||||||||||||||||||| ||||||    
T  35119458 aatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 37473732 - 37473673
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 133  Q
    |||||||||||||| ||| |||||||||||||||||    || |||||||||||||||||    
T  37473732 tttgaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacct 37473673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 4572256 - 4572314
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 133  Q
    ||||||||| ||| |||||||||| ||||||||| |  ||| |||||||||||||||||    
T  4572256 ttgaagaagataaattagcccacccaaattgacaccggagagaatcgaacctgagacct 4572314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  124 cctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 190  Q
    |||||||| | ||||| || |||||||||| ||||||||  |||||||  |||||||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 190
Target Start/End: Original strand, 29385701 - 29385817
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||| ||  ||||||||| |||||| || |  ||| |||| |||||||||||| ||||| || |||||||| || |||| ||  || ||||      
T  29385701 tttgaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatc 29385800  T
Q  174 aggccaacccaagtggg 190  Q
     ||||||||||||||||    
T  29385801 cggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 44628146 - 44628257
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||||||||| ||||||||| || ||  |||| ||| |||||| | ||||| || |||||||| |  |||| || ||| | ||| ||||    
T  44628146 aagaagctaaattagcccaccaaaattgaca-ccgagggaatcaaacttgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggc 44628244  T
Q  178 caacccaagtggg 190  Q
    |||||||||||||    
T  44628245 caacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 45559227 - 45559199
Alignment:
Q  165 aataccactaggccaacccaagtgggtta 193  Q
    |||||||||||||||||||||||||||||    
T  45559227 aataccactaggccaacccaagtgggtta 45559199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 198
Target Start/End: Original strand, 10499067 - 10499191
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||||||||  ||| |||||||||||||||||  ||||||| || ||||||| ||||| ||  ||||||||     
T  10499067 tttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccacc 10499166  T
Q  174 aggccaacccaagtgggttatgaaa 198  Q
    ||||||||||||||||||| |||||    
T  10499167 aggccaacccaagtgggttttgaaa 10499191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 2667980 - 2667869
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  |||||||||||||||||||    ||||||||||||||||||||| |||||||| |||||||||| ||||| ||  ||||||||     
T  2667980 tttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccacc 2667881  T
Q  174 aggccaacccaa 185  Q
    ||||||||||||    
T  2667880 aggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 14186748 - 14186647
Alignment:
Q  91 agcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtggg 190  Q
    |||||||||||||||||| |  ||| ||||||||||||||||| ||||| || |||||| |||  |||| ||  ||||||||||||||||||||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccactaggccaacccaagtggg 14186650  T
Q  191 tta 193  Q
    |||    
T  14186649 tta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 49397499 - 49397579
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 154  Q
    |||||||||||||| |||| |||||||||||||||||  |||||||||||| |||||||| |||||  | |||||||||||    
T  49397499 tttgaagaagctaaattagtccacctaaattgacatctaagataatcgaacatgagacctcgaggagaagcacactcccaa 49397579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 14339728 - 14339609
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||| ||||| ||     || ||||||||||||||| | ||||| || |||||||||||||||| ||  ||||||||     
T  14339728 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccacc 14339629  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||||||| |||| |||||||    
T  14339628 aggccaatccaactgggtta 14339609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 51903836 - 51903955
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| ||||||||||||||||  ||||| || |||||||||| ||||| ||  |||||||      
T  51903836 tttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaac 51903935  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||| ||||||| ||||||||    
T  51903936 aggtcaacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 11642167 - 11642285
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  || ||| | ||||||||||    ||||||||||||||||||||| ||||| || |||| || || ||||| |||| |||||| |    
T  11642167 tttgaagaagctaaactaaccctcttaaattgacactaaagataatcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagt 11642266  T
Q  174 aggccaacccaagtgggtt 192  Q
    ||||||| |||||||||||    
T  11642267 aggccaatccaagtgggtt 11642285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 36720495 - 36720381
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    ||||||||||   ||||||||||||||||||    ||| |||||||||||| |||| ||||| || |||||||||| ||||| ||  |||||||| || |    
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagac 36720396  T
Q  178 caacccaagtgggtt 192  Q
    |||||||||||||||    
T  36720395 caacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 4222238 - 4222141
Alignment:
Q  95 cacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||||| |  ||| |||||||||| |||| | ||||| || |||||||||| ||||| ||  |||||||||| |||||||||||||||||    
T  4222238 cacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 194
Target Start/End: Original strand, 10445097 - 10445218
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccac 172  Q
    |||||||||||||| |||||||||  |||||  || |  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  || | ||||    
T  10445097 tttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccac 10445196  T
Q  173 taggccaacccaagtgggttat 194  Q
    ||||||||||||||||||||||    
T  10445197 taggccaacccaagtgggttat 10445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 49494147 - 49494224
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||| |||||||||||| |||||||| |||||||||||||  | ||| ||||||||||||| |||||||||| |||||    
T  49494147 aatcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtgagttat 49494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 52769941 - 52770026
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 159  Q
    |||||||||||||| ||||||||||||||||||||    ||| |||||||||||||||||  |||| || |||||||||| |||||    
T  52769941 tttgaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 4844472 - 4844580
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    ||||||||||| |||||||||  |||||| || |  ||| |||||| |||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4844571  T
Q  177 ccaacccaa 185  Q
    |||||||||    
T  4844572 ccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 4870168 - 4870276
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    ||||||||||| |||||||||  |||||| || |  ||| |||||| |||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4870267  T
Q  177 ccaacccaa 185  Q
    |||||||||    
T  4870268 ccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 203169 - 203090
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||||| | ||||  ||||| | |||||||||  ||||| ||| ||||||||||||||||||||||||||||    
T  203169 agataatcgaacctcaaaccttaaggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 2597181 - 2597296
Alignment:
Q  78 aagaagctaagttag-cccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    |||||||||| |||| |||||||||||| ||||  |||| | |||||||||||||||  |||| || |||||||| ||||||  ||  |||||||| ||     
T  2597181 aagaagctaaattagtcccacctaaatttacatagtagagattcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccaga 2597280  T
Q  177 ccaacccaagtgggtt 192  Q
    ||||||||||||||||    
T  2597281 ccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 8075085 - 8075196
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||||||||||| |||| ||||| || ||||||||||| |||| ||   ||||||||    
T  8075085 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccact 8075184  T
Q  174 aggccaacccaa 185  Q
    ||| ||||||||    
T  8075185 agggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 8170790 - 8170671
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||  ||| |||||||||| ||||||||| |  ||  ||||||||||||||||| ||| | || ||||||||||| |  | ||  |||||||||    
T  8170790 tttgaagaatttaaattagcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccact 8170691  T
Q  174 aggccaacccaagtgggtta 193  Q
    |||||||||||| |||||||    
T  8170690 aggccaacccaaatgggtta 8170671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 16991656 - 16991541
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| ||||||||| ||||||| ||||  ||| |||| || |||||||||  | |||||  ||||||||| ||||| ||  |||||||| ||||    
T  16991656 aagaagctaaattagcccacataaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggc 16991557  T
Q  178 caacccaagtgggtta 193  Q
    |||||||| |||||||    
T  16991556 caacccaaatgggtta 16991541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 27093362 - 27093437
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||| |||||||||||| ||||| || ||||||||||| | || ||  ||||||||||||||||||||||||||||    
T  27093362 aatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 30311381 - 30311306
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||   ||||||||||||||||||| |||||||    
T  30311381 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 31520563 - 31520681
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||||||| |||||||||  |||||||||    ||| |||| ||||| |||||| ||||| || |||||||||| ||||| ||  ||| ||||     
T  31520563 tttgaaaaagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccacc 31520662  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  31520663 aggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 192
Target Start/End: Original strand, 31788945 - 31789046
Alignment:
Q  90 tagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 189  Q
    ||||||||| ||||||||| |  |||||||| ||||| | |||| ||||| || |||||||||| ||||| ||  |||| ||||||||||||||||||||    
T  31788945 tagcccacccaaattgaca-cagagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgg 31789043  T
Q  190 gtt 192  Q
    |||    
T  31789044 gtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 46518746 - 46518628
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  || ||| |  |||||| ||||  ||| |||| ||||||| |||| ||||| || |||||||||| ||||| ||  |||||||||    
T  46518746 tttgaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccact 46518647  T
Q  174 aggccaacccaagtgggtt 192  Q
    | |||||||||||||||||    
T  46518646 atgccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 40864891 - 40864932
Alignment:
Q  4 atgtcgaagcagataaagaagctcatgttagagaggtattgt 45  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  40864891 atgtggaagcagataaagaagctcatgttagagaggtattgt 40864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 47454575 - 47454692
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  || ||||||||||||| |||    || ||||||||||||||||| ||||| || |||||||| | ||| | ||  |||||||||    
T  47454575 tttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccact 47454674  T
Q  174 aggccaacccaagtgggt 191  Q
    ||  ||||||||||||||    
T  47454675 agaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 54990820 - 54990755
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    |||||||||||||| ||||||||||||||||| ||||   || ||||||||||||||||| |||||    
T  54990820 tttgaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgagga 54990755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 28703405 - 28703481
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||||||||||| || || || |||||||||| ||||| || ||||| |||| | |||||||||||||||||    
T  28703405 aatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtta 28703481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 33899725 - 33899653
Alignment:
Q  81 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 153  Q
    ||||||| ||||| |||| ||||||||| |  ||| ||||||||||||||||||||||| || ||||||||||    
T  33899725 aagctaaattagcacacccaaattgacaccaaagagaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 13808843 - 13808958
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||  ||| | ||||||||||   ||| ||| ||||||||||||||||||| || |||||| ||| ||||| ||| ||||  ||     
T  13808843 tttgaagaagctaaattaatccatccaaattgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagacc 13808942  T
Q  174 aggccaacccaagtgg 189  Q
    || |||||||||||||    
T  13808943 agaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 15048058 - 15048137
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||||||| ||||| || |||| ||||| ||||| ||   |||||| || |||||||||||||||||    
T  15048058 agataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 37788466 - 37788541
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || |||||||| |  | || ||| ||||||||| ||||||||||||||||||    
T  37788466 aatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 44743815 - 44743898
Alignment:
Q  76 tgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 159  Q
    |||||||||||| ||| |||||| |||||| ||    ||||||||||||||||||||| ||||| || |||||||||| |||||    
T  44743815 tgaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatccc 44743898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 12761630 - 12761511
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||| ||  |||||||||||||||| || |   || |||||||||||||| ||  |||| || ||||||||||  |||| ||| ||||||||     
T  12761630 tttgaagaagcaaaactagcccacctaaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccacc 12761531  T
Q  174 aggccaacccaagtgggtta 193  Q
    || |||||||| | ||||||    
T  12761530 agaccaacccatgcgggtta 12761511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 16354893 - 16354968
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||  ||||| || ||||||| ||  | || ||  ||||||||||||||||||||||||||||    
T  16354893 aatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 11612373 - 11612307
Alignment:
Q  118 atcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaaccca 184  Q
    ||||||||||||||||  |||| || ||||||||||  |||| ||| |||||||| |||||||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 8796141 - 8796170
Alignment:
Q  165 aataccactaggccaacccaagtgggttat 194  Q
    ||||||||||||||||||||||||||||||    
T  8796141 aataccactaggccaacccaagtgggttat 8796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 44069876 - 44069799
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 151  Q
    ||||||||||||||  |||||||||||||||| || |  | | |||| |||||||||||| ||||| || ||||||||    
T  44069876 tttgaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactcc 44069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 7673387 - 7673263
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||| |||| |||| |||  |||||||||||   |||  ||||||||| |||||| ||| |  | |||||| ||||||||| ||| ||||||||     
T  7673387 tttgaagaatctaaattagtccatttaaattgacattagagagtatcgaacctaagaccttgagaataagcacacttccaaatcccaagtcaataccacc 7673288  T
Q  174 aggccaacccaagtgggttatgaaa 198  Q
    || |||||| || |||||| |||||    
T  7673287 agaccaacctaactgggttgtgaaa 7673263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 7973674 - 7973622
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacct 126  Q
    |||||||||||||| |||| ||||| |||||||||||  ||| ||||||||||    
T  7973674 tttgaagaagctaaattagtccacccaaattgacatcagagagaatcgaacct 7973622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 35111255 - 35111179
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    |||||||| |||||||| ||||| || ||||||||||  || | | | ||| |||||||||||| ||||||||||||    
T  35111255 aatcgaacatgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtta 35111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 36015566 - 36015510
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 130  Q
    ||||||||||| || |||||||||||||||||||| |  ||| ||||| ||||||||    
T  36015566 tttgaagaagcaaaattagcccacctaaattgacaccgaagagaatcgtacctgaga 36015510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 15281 - 15399
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  ||||||||     
T  15281 tttgaagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacc 15380  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||||||||||||||    
T  15381 agaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 16773925 - 16773807
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||||||||| ||||  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||| ||||||||     
T  16773925 tttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccacc 16773826  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||| ||||||||||    
T  16773825 agaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 29075899 - 29075780
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||| |||||||| || |  ||| |||||||| ||||| || ||||| || |||||||||| ||||| ||  |||||||||    
T  29075899 tttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccact 29075800  T
Q  174 aggccaacccaagtgggtta 193  Q
    |||| |||||||||||||||    
T  29075799 aggcaaacccaagtgggtta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 6844847 - 6844728
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  ||  |||||||||||| ||    |||||||||||||| |||||| ||||| || ||||||||||||| || ||| ||||||||     
T  6844847 tttgaagaagctaaactaatccacctaaattggcacgagagataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacc 6844748  T
Q  174 aggccaacccaagtgggtta 193  Q
     |||||||||||||||||||    
T  6844747 tggccaacccaagtgggtta 6844728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 22737200 - 22737082
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| |||||||||||||| |||  ||  ||||||||||||||| | | ||| || |||||| |||| |||| ||  |||||||||    
T  22737200 tttgaagaagctaaattaacccacctaaattgatatcagagggaatcgaacctgagacattggggaggagcacacttccaagtcccaagccaataccact 22737101  T
Q  174 aggccaacccaagtgggtt 192  Q
    || ||||||||||||||||    
T  22737100 agaccaacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 17028225 - 17028342
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    ||||||||||| ||||||||||||||||||||    ||  |||| |||||||||||| ||||| || ||||||||||| |||| |   ||||| ||||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactagg 17028324  T
Q  177 ccaacccaagtgggttat 194  Q
     |||||||||||||||||    
T  17028325 tcaacccaagtgggttat 17028342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 25627149 - 25627056
Alignment:
Q  100 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||| |  ||| ||||||||||||||||| ||||| || ||||||||||| | || ||  |||||||||||||||||||||||||||||    
T  25627149 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtta 25627056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 198
Target Start/End: Original strand, 3252247 - 3252371
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||| |||| |||||||| |  ||||| ||||  ||| |||||||||||||| |  ||||||||   ||||||||| || | ||| |||||||||    
T  3252247 tttgaagaaactaaattagcccatccgaattggcatcagagagaatcgaacctgagagcctgaggaagagtgcactcccaagtctcaagtcaataccact 3252346  T
Q  174 aggccaacccaagtgggttatgaaa 198  Q
    |||||||||||||||||||| ||||    
T  3252347 aggccaacccaagtgggttaagaaa 3252371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 14495766 - 14495882
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    |||||||||||  ||||||| |||||||| ||||  ||| |||| || ||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||     
T  14495766 gaagaagctaaactagcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 14495865  T
Q  177 ccaacccaagtgggtta 193  Q
    ||||||||| |||||||    
T  14495866 ccaacccaaatgggtta 14495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 8278233 - 8278352
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||||||| | || |  |||||||| ||| ||||| || ||||| || ||||||||||| |||| ||  |||||||      
T  8278233 tttgaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatc 8278332  T
Q  174 aggccaacccaagtgggtta 193  Q
    || |||||||||||||||||    
T  8278333 agaccaacccaagtgggtta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 22020820 - 22020938
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||| |||| |||||||||||||||| |||    ||| ||||||| ||||||| |  |||| || |||||||||| ||||| || ||||||||||    
T  22020820 tttgaagaaactaaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccact 22020919  T
Q  174 aggccaacccaagtgggtt 192  Q
    | ||||||||||| |||||    
T  22020920 atgccaacccaagagggtt 22020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 29173604 - 29173531
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 151  Q
    |||||||||| |||||||||||||||||||| |  |||||||||||||||| |||| ||||| || ||||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 21589406 - 21589288
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  |||||||||||||||| || |  ||  ||||||||||||||| | |||||  | || |||||||  |||| ||  ||||||||     
T  21589406 tttgaagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccacc 21589307  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  21589306 aggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 87424 - 87499
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||| |||||||||||| ||||| || |||||||||| || || ||  |||||||||||||||||| |||||||||    
T  87424 aatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 1410619 - 1410728
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||| |||  |||||||| |  ||| ||||||| ||||||||| ||||| || |||||||||| ||||| ||| ||||||||     
T  1410619 tttgaagaagctaaattagcctacc-caattgacaccacagagaatcgaa-ctgagacctcgaggaggagcacactcccatatcccaagtcaataccacc 1410716  T
Q  174 aggccaacccaa 185  Q
    || |||||||||    
T  1410717 agaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 43241655 - 43241754
Alignment:
Q  89 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 188  Q
    |||| ||| |||||||| ||||  ||| ||| |||||||||||||  ||||||  |||||||| | ||||| ||| ||||||||||| ||||||||||||    
T  43241655 ttagtccagctaaattggcatcgaagagaattgaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtg 43241754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 43442314 - 43442235
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactccca 153  Q
    ||||||||| |||| |||||||| | ||||||||| |  ||| ||||||||||||||||| ||||| || ||||||||||    
T  43442314 tttgaagaaactaaattagcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactccca 43442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 24907607 - 24907542
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    |||||| ||||||| ||||||||||||||||| ||||   ||||||||||||||||| || |||||    
T  24907607 tttgaataagctaaattagcccacctaaattggcatcaaggataatcgaacctgagaacttgagga 24907542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 18437160 - 18437088
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 189  Q
    ||||||||| || || | ||||| || ||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  18437160 aatcgaacccgaaactttgaggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 19043529 - 19043457
Alignment:
Q  121 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||||| | ||| | || ||||||||||| | || ||| |||| ||||||||||||||||||||||||    
T  19043529 gaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaacccaagtgggtta 19043457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 14285236 - 14285161
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || ||||||||||  | || ||  ||| ||||| ||||||||||||||||||    
T  14285236 aatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 16436692 - 16436622
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 188  Q
    |||||||| |||||||| ||||| || |||||||| || |||| ||  ||||||||||||||||||||||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactcc-aagtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 18169793 - 18169905
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 174  Q
    ||||||||||||| ||||||||||||| ||| || |  ||| |||||||||| |||||  || || ||||||||||||| ||||| ||| ||||||   |    
T  18169793 ttgaagaagctaaattagcccacctaatttggca-ctgagagaatcgaacct-agaccacgaagaggaccacactcccagatcccaagtcaatacc---a 18169887  T
Q  175 ggccaacccaagtgggtt 192  Q
    ||||||| ||||||||||    
T  18169888 ggccaactcaagtgggtt 18169905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 21549138 - 21549213
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||| |||||| |  |||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||    
T  21549138 aatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 26078052 - 26078127
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| || ||  | || |||||||| |||| |   ||||||||||||||||||||||||||||    
T  26078052 aatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 30883203 - 30883274
Alignment:
Q  121 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||| |||||||| ||||| || ||||||||||  |||| ||  ||||||||||| ||||||||||||||||    
T  30883203 gaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 34984881 - 34984806
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||| |||||| ||||| || ||||||||||  | || ||  ||||||||||| ||||||||||||||||    
T  34984881 aatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 35705103 - 35705045
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 133  Q
    ||||||||||||| |||||||||| ||||||||| |   || |||||||||||||||||    
T  35705103 ttgaagaagctaaattagcccacccaaattgacaccggggagaatcgaacctgagacct 35705045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 7918518 - 7918547
Alignment:
Q  165 aataccactaggccaacccaagtgggttat 194  Q
    ||||||||||||||||||||||||||||||    
T  7918518 aataccactaggccaacccaagtgggttat 7918547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 5390853 - 5390926
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || |||  ||||||  ||| ||  ||||||||||||||||||||| ||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcac--tcccaagccccaagccaataccactaggccaacccaaatgggtt 5390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 10054165 - 10054109
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 130  Q
    |||||||||||||| |||||||||| || |||| |||  ||| ||||||||||||||    
T  10054165 tttgaagaagctaaattagcccacccaagttgatatcggagagaatcgaacctgaga 10054109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 14804671 - 14804743
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 189  Q
    |||||||||| |||| ||||| | || ||||||| |||||||| |   |||| ||||||||||||||||||||    
T  14804671 aatcgaacctaagacttagagaaggaacacactcacaaatcccaaaccaataacactaggccaacccaagtgg 14804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 968476 - 968362
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| ||||||||||||||||| ||||  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||| ||||    
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  178 caacccaagtgggtt 192  Q
    |||| ||||||||||    
T  968376 caactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 23361617 - 23361726
Alignment:
Q  84 ctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaaccc 183  Q
    |||| |||||||||||||||||||| |  ||| ||| ||||||||||||| ||||| || |||||||||| ||||| ||| |||||||| ||| ||||||    
T  23361617 ctaaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccc 23361716  T
Q  184 aagtgggtta 193  Q
    ||||||||||    
T  23361717 aagtgggtta 23361726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 16852458 - 16852340
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  |||||||||||||||| ||     || ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||    
T  16852458 tttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccact 16852359  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  16852358 aggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 44780072 - 44780190
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||| |||||||||||| ||||| || ||||||||||| |||| ||  ||| |||||    
T  44780072 tttgaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccact 44780171  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  44780172 aggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 3624697 - 3624577
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||||||| |||||||||||||||||||  |  ||| ||||||||||||||||| || || || ||||||||||  |||| ||  |||||||||    
T  3624697 tttgaaaaagctaaattagcccacctaaattgacc-cggagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccact 3624599  T
Q  174 aggccaacccaagtgggttatg 195  Q
    ||||||||||||||||| ||||    
T  3624598 aggccaacccaagtgggctatg 3624577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 11819894 - 11819775
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  11819894 tttgaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccact 11819795  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||| |||||||| |||||||    
T  11819794 agggcaacccaaatgggtta 11819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 190
Target Start/End: Complemental strand, 2203610 - 2203494
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||||||| |||||||||| |||||| || |   || ||| || |||||||||| ||||| || ||||||||||  |||| ||  |||||||||    
T  2203610 tttgaataagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccact 2203511  T
Q  174 aggccaacccaagtggg 190  Q
    |||||||||||||||||    
T  2203510 aggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 19703488 - 19703563
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || ||||||| ||  |||| ||  ||||||||||||||||||||||||||||    
T  19703488 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 20994419 - 20994534
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaag-accacactcccaaatccctagttaataccactagg 176  Q
    |||||||||| |||||||| | ||||||  | |  |||||||||| |||||||| | |||| || | ||||||||||  |||| ||| ||||||||||||    
T  20994419 aagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactagg 20994518  T
Q  177 ccaacccaagtgggtt 192  Q
    ||||||||||||||||    
T  20994519 ccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 8059750 - 8059632
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  |||| |||  |||||||||||   || ||| ||||||||||||| ||||| || ||||||| || || || ||| |||||||      
T  8059750 tttgaagaagctaaactagctcactcaaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatc 8059651  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  8059650 aggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 8485117 - 8484999
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||||||||| || |  ||| |||||||  ||||||||  | || || ||||||| ||  |||| ||  ||||||||     
T  8485117 tttgaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccacc 8485018  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  8485017 aggccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 18540416 - 18540298
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| ||| |  |||||| || |  ||| ||||||||||||||||| |||||  |  |||||||||  |||| ||  |||||||||    
T  18540416 tttgaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccact 18540317  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  18540316 aggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 28783178 - 28783060
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||| || |   || |||||||| |||||||| ||||| || ||||||||||  || | ||  ||||||||     
T  28783178 tttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccacc 28783079  T
Q  174 aggccaacccaagtgggtt 192  Q
    | |||||||||||||||||    
T  28783078 aagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 29431129 - 29431011
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||  |||||  || |  ||| ||||||||||||| |||  |||| || ||||||||||| |||| ||  |||||| |     
T  29431129 tttgaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgcc 29431030  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  29431029 aggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 29858007 - 29858124
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||||||| ||||||||||||||||| || |   |  ||||||||||||||||| ||||| || |||||||||   |||| ||  ||||||||     
T  29858007 tttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccacc 29858106  T
Q  174 aggccaacccaagtgggt 191  Q
    ||||||| ||||||||||    
T  29858107 aggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 4830605 - 4830487
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||  ||| | ||||||||| | || | | | ||||||||||||| ||||| || ||||||| || ||||| |   ||||||||     
T  4830605 tttgaagaagctaaattaatccatccaaattgacaccgtataaatttgaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccacc 4830506  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  4830505 aggccaacccaagtgggtt 4830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 27750805 - 27750728
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    ||||||||||||||||| ||||| || ||||||||||| |||| ||   ||||||| ||| |||||||| ||||||||    
T  27750805 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggttat 27750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 6569755 - 6569847
Alignment:
Q  100 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||| |  ||| |||||||| ||| ||||| |||| || |||||||||| ||||| ||  |||| ||||||||||||| |||||||||    
T  6569755 aaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 35690037 - 35690129
Alignment:
Q  89 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaac 181  Q
    |||||| || |||||||||| |  ||| ||||||||||||||||| ||||| || || || |||| ||||| ||  |||||||||||||||||    
T  35690037 ttagcctacttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 3826778 - 3826853
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||||| || | ||| || ||||||| |||||  | ||  ||||||||||||||||||||||||||||    
T  3826778 aatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggtt 3826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 11518835 - 11518954
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| || |||| |||||||||  ||||||||||  |||  |||||||||| |||||| ||||| |   |||||||||| | || ||   ||||||||    
T  11518835 tttgaataaactaaattagcccactcaaattgacattatagtgaatcgaacctaagaccttgaggaggggtacactcccaagttccaagcctataccact 11518934  T
Q  174 aggccaacccaagtgggtta 193  Q
    |||| |||||||||||||||    
T  11518935 aggctaacccaagtgggtta 11518954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 30483889 - 30483960
Alignment:
Q  121 gaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||   ||||| || |||||||||| ||||| ||  ||||||||| ||||||||||||||||||    
T  30483889 gaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 35641902 - 35641977
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||| | ||||| || |||||||||||||| | ||   ||||||| || ||||||||||||||||    
T  35641902 aatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 6536635 - 6536561
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 151  Q
    ||||||||||| ||| ||||||||||||| || |  ||| ||| ||||||||||||| ||||| || ||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcc 6536561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Complemental strand, 7347955 - 7347921
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgaca 108  Q
    |||||||||||||| ||||||||||||||||||||    
T  7347955 tttgaagaagctaaattagcccacctaaattgaca 7347921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 23874386 - 23874460
Alignment:
Q  120 cgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||||||||||||| ||||| |  || | |||||  |||| ||  ||||||||||||||||||||||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggttat 23874460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 42740587 - 42740501
Alignment:
Q  99 taaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 185  Q
    |||||||||| |  ||| ||| ||||||||||||| ||||| || || ||||||||||  | || |||||||||||| |||||||||    
T  42740587 taaattgacaccagagagaattgaacctgagaccttgaggatgatcaaactcccaaatttcaagctaataccactagaccaacccaa 42740501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 3058009 - 3058125
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccacta 174  Q
    ||||||||||||| | |||||||||||||||||  |  ||| ||||||||||||||||| |  || || |||||||||||  ||| |   |||||||| |    
T  3058009 ttgaagaagctaaat-agcccacctaaattgacgccgaagagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccacca 3058107  T
Q  175 ggccaacccaagtgggtt 192  Q
    | ||||||||| ||||||    
T  3058108 gaccaacccaaatgggtt 3058125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 3305146 - 3305231
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 159  Q
    |||| ||||| ||| ||||||||||||||||| || |  |||||||||||  |||||||| ||||| || ||| |||||| |||||    
T  3305146 tttgcagaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatccc 3305231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 16843753 - 16843832
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaa 154  Q
    |||||||||||||| | |||||| ||||||||||| |  ||| |||||||||||||| || | ||| || |||||||||||    
T  16843753 tttgaagaagctaaat-agcccatctaaattgacaccggagagaatcgaacctgagatcttgcggaggagcacactcccaa 16843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 33549218 - 33549104
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| ||||| ||||||||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||| || |    
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 33549119  T
Q  178 caacccaagtgggtt 192  Q
    |||||||||||||||    
T  33549118 caacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 6758380 - 6758497
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| || ||||||||||||||||| |  ||| |||||| | |||||||| ||||  || |||||||||||||||  ||  ||||||||     
T  6758380 tttgaagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccacc 6758479  T
Q  174 aggccaacccaagtgggt 191  Q
    |||||||| |||||||||    
T  6758480 aggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 12633124 - 12633008
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    ||||||||||| |||| |||| |||||||||||   ||| |||||||| ||||| || || || || |||||||||||||||| ||| |||| |||  ||    
T  12633124 gaagaagctaaattagtccacttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccggg 12633025  T
Q  177 ccaacccaagtgggtta 193  Q
     ||||||||||||||||    
T  12633024 acaacccaagtgggtta 12633008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 12234469 - 12234583
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| ||| |||| |||||||||||    ||| ||||||||||||||||| |||   || ||||||||||  |||| ||| |||||||| ||||    
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T
Q  178 caacccaagtgggtt 192  Q
    ||||| |||||||||    
T  12234569 caacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 21418588 - 21418470
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||||||||||| ||||| ||     || |||||||| |||||| | ||||| || ||||||||||| |||| ||  ||||||||     
T  21418588 tttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccacc 21418489  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||| ||||||    
T  21418488 aggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 31622949 - 31623067
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| ||||||||| |  ||  | || |||||||||||| ||||| || ||||||||||  |||| ||  ||||||||     
T  31622949 tttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccacc 31623048  T
Q  174 aggccaacccaagtgggtt 192  Q
     | ||||||||||||||||    
T  31623049 ggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 1056643 - 1056762
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| ||||||||| ||| || |  ||| |||||||| | | |||| ||||| || || |||||||| ||||  |  |||||||||    
T  1056643 tttgaagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccact 1056742  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||| ||||||||||||||||    
T  1056743 aggtcaacccaagtgggtta 1056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 12188304 - 12188379
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||| ||| |||| ||||| || ||||||||||  |||| ||  ||||||||||||||||||||||||||||    
T  12188304 aatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 14558080 - 14557962
Alignment:
Q  73 gtttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 172  Q
    ||||||||||||||| |||| ||||| ||||||||| ||  || ||||||||||||||||  ||||| || |||||| |||  |||| ||  || |||||    
T  14558080 gtttgaagaagctaaattagaccacccaaattgaca-ccgggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccac 14557982  T
Q  173 taggccaacccaagtgggtt 192  Q
     || ||||||||||||||||    
T  14557981 cagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 30127518 - 30127399
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||| |||||||| ||| || |||||||||| || |  | | ||||||||||||||||| || || || |||||||||| | ||| ||  ||||||||     
T  30127518 tttgaggaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccacc 30127419  T
Q  174 aggccaacccaagtgggtta 193  Q
    || |||||||||||||||||    
T  30127418 agaccaacccaagtgggtta 30127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 11423641 - 11423565
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||||||||||| |||||  | || ||||||||||||| ||| |||||||| || ||| |||||| ||||||    
T  11423641 aatcgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtta 11423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 3715566 - 3715451
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| | ||||||||||||||||||    ||| |||||||| |||||||| || ||  | || ||||||| ||| | ||| ||||||||||| |    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcc 3715467  T
Q  178 caacccaagtgggtta 193  Q
    ||||| || |||||||    
T  3715466 caaccaaaatgggtta 3715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 181
Target Start/End: Complemental strand, 28364055 - 28363948
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||  ||| |||||||| | ||||||||| |  ||||||||||| ||||||||| ||||| || ||||||| || ||||| |   |||||||||    
T  28364055 tttgaagaaattaaattagcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccact 28363956  T
Q  174 aggccaac 181  Q
    | ||||||    
T  28363955 atgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 32613100 - 32613214
Alignment:
Q  76 tgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactag 175  Q
    ||||||||||||  ||| |||  ||||||||||    ||| |||||||| ||||| || ||| | || |||||||||| | ||| ||| |||||||| ||    
T  32613100 tgaagaagctaaactagtccatttaaattgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccag 32613199  T
Q  176 gccaacccaagtggg 190  Q
    |||||||||||||||    
T  32613200 gccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 12216847 - 12216803
Alignment:
Q  89 ttagcccacctaaattgacatcctagataatcgaacctgagacct 133  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||    
T  12216847 ttagcccacctaaattgacagtcaagagaatcgaacctgagacct 12216803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 7949412 - 7949530
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||||||||||||| |  ||| ||||||||||||||||| ||||| || |||||||| |  |||| ||  |||||| ||    
T  7949412 tttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgct 7949511  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||| ||||||||||||    
T  7949512 aggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 28635814 - 28635694
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||| || |  ||| |||||||||| ||||||  |||| || |||||||||| ||||| ||| | ||||||     
T  28635814 tttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccacc 28635715  T
Q  174 aggccaacccaagtgggttat 194  Q
    ||| |||||||||||||||||    
T  28635714 aggacaacccaagtgggttat 28635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 49576852 - 49576963
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||| |||||||| ||||| ||||||||||   ||| ||||||||||||||||| ||||| || ||||||||||| |||  ||  ||||||||     
T  49576852 tttgaagaagttaagttagtccacccaaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccacc 49576951  T
Q  174 aggccaacccaa 185  Q
    ||||||||||||    
T  49576952 aggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 21660106 - 21660220
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||| | |||||||||||||    |||||||||||| |||||||| |||||||| |||||||||| ||| | ||| |||||||| || |    
T  21660106 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21660205  T
Q  178 caacccaagtgggtt 192  Q
    |||||||||| ||||    
T  21660206 caacccaagttggtt 21660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 21668870 - 21668984
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||| | |||||||||||||    |||||||||||| |||||||| |||||||| |||||||||| ||| | ||| |||||||| || |    
T  21668870 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21668969  T
Q  178 caacccaagtgggtt 192  Q
    |||||||||| ||||    
T  21668970 caacccaagttggtt 21668984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 37109352 - 37109428
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||||||||||||||||||    
T  37109352 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 37109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 19680789 - 19680864
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||| |||||| |||||||| ||||||||||| |||| ||  |||||||||||||||| |||||||||||    
T  19680789 aatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 8030162 - 8030280
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||||||    ||  |||||||| |||||||| ||||| || ||||||||||| |||| ||   ||||||||    
T  8030162 tttgaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccact 8030261  T
Q  174 aggccaacccaagtgggtt 192  Q
    ||| ||| |||||||||||    
T  8030262 agggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 51954232 - 51954134
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 172  Q
    |||||||||||||| |||||||||| ||||||||| |  |||||||| |||||||||||| ||||| || || |||||||| |||| ||| ||| ||||    
T  51954232 tttgaagaagctaaattagcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaatgccac 51954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 19238578 - 19238654
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||| ||||||| ||||| || ||||||||||| |||| ||  |||||||| ||||||||||||||||||||    
T  19238578 aatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 31826723 - 31826607
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||| ||| |||||||||| |||||||||    ||  |||||||| |||||||| ||||| || ||||||| |||||||| ||   |||||||||||     
T  31826723 aagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactaggg 31826624  T
Q  178 caacccaagtgggttat 194  Q
    |||||||||||||||||    
T  31826623 caacccaagtgggttat 31826607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 37274417 - 37274537
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccac 172  Q
    |||||||||||||| ||||||||| ||||||  || |  ||| |||||||||| |||||| ||||| || ||||||||||  |||| ||  || ||| ||    
T  37274417 tttgaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgac 37274516  T
Q  173 taggccaacccaagtgggtta 193  Q
    |||||||||||||||||||||    
T  37274517 taggccaacccaagtgggtta 37274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 46545829 - 46545709
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| || |||| |||| ||| |||||||||||||  ||| ||||||| |||||| || ||||| || ||||||| ||  || | ||  |||||||||    
T  46545829 tttgaaaaaactaaattagtccatctaaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccact 46545730  T
Q  174 aggccaacccaagtgggttat 194  Q
    |||||||||||||||||||||    
T  46545729 aggccaacccaagtgggttat 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 37720171 - 37720290
Alignment:
Q  73 gtttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccac 172  Q
    ||||||||||||||| ||||||||||||||||||   |   || ||||||||||| ||||| ||||| |  ||||||||||  |||| ||  |||| |||    
T  37720171 gtttgaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacac 37720270  T
Q  173 taggccaacccaagtgggtt 192  Q
     |||||||||||||||||||    
T  37720271 caggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 18404845 - 18404959
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    ||||||||||  || ||||| |||||||||| | |||||||||||||||||||| | || || ||  | | ||||||||||| ||| ||||||||||  |    
T  18404845 aagaagctaaactaacccacttaaattgacaccttagataatcgaacctgagacattgatgaggagtatattcccaaatcccaagtcaataccactaaac 18404944  T
Q  178 caacccaagtgggtt 192  Q
    |||||||| ||||||    
T  18404945 caacccaaatgggtt 18404959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 51250484 - 51250598
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||||||||| |||||| || |  ||  |||||||| ||||| || ||||  || |||||||||| ||||| ||  |||||||| ||||    
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  178 caacccaagtgggtt 192  Q
    |||||||||||||||    
T  51250584 caacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 47044792 - 47044715
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    ||||||||||||||||| ||||| || || |||| || ||||| ||| |||||||| ||||||| |||||||||||||    
T  47044792 aatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 193
Target Start/End: Original strand, 9936926 - 9937038
Alignment:
Q  81 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 180  Q
    ||||||| ||| |||||| ||||||||| |   || |||||||||||| || | ||||| || ||||||||||| || | |||  |||||||||||||||    
T  9936926 aagctaaattaacccacccaaattgacaacggtgagaatcgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgataccactaggccaa 9937025  T
Q  181 cccaagtgggtta 193  Q
    ||||||| |||||    
T  9937026 cccaagtaggtta 9937038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 31759659 - 31759735
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||| ||||||||| ||||| || ||||||||||| |||| ||  |||||||||||  ||||||||||||||||    
T  31759659 aatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtta 31759735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 45061096 - 45060977
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||| |  |||||||  ||||||||||||  |||||||||||  ||||| || ||  | ||  ||||| ||||| ||| ||| |||||||||    
T  45061096 tttgaagaagctcaactagcccatttaaattgacatcgaagataatcgaatttgagatcttgaacaggagtacacttccaaaccccaagtcaataccact 45060997  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||| ||||||||||||||||    
T  45060996 aggtcaacccaagtgggtta 45060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 55427165 - 55427276
Alignment:
Q  81 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaa 180  Q
    ||||||| |||||||||| |||||| || |   || ||||||||||||||||| ||| | || || |||||||  |||| ||  |||||||| |||||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaa 55427264  T
Q  181 cccaagtgggtt 192  Q
    ||||||||||||    
T  55427265 cccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 2622396 - 2622475
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctag----ttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||| | ||||| || ||||||||||  |||| ||    ||||||||||||||||||||||||||||||    
T  2622396 aatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 13015538 - 13015444
Alignment:
Q  81 aagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactag 175  Q
    ||||||| ||| |||||||||||||||| |  ||| |||||||| |||||| | ||||| || ||||||||||| |||| ||  |||||||||||    
T  13015538 aagctaaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 37443813 - 37443701
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    ||||| |||| ||||||||| ||||||| || |  |||||||||||| ||| |||| |||||  ||   ||||||| ||||| ||  ||||||||||||     
T  37443813 aagaaactaaattagcccacataaattggcaccagagataatcgaacatgaaacctcgaggagtac---actcccagatcccaagccaataccactaggt 37443717  T
Q  178 caacccaagtgggtta 193  Q
    ||||||||||||||||    
T  37443716 caacccaagtgggtta 37443701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 27965538 - 27965586
Alignment:
Q  144 cacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||||||||    
T  27965538 cacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 38869843 - 38869783
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  |||||||||||||    
T  38869843 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 4249252 - 4249177
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||| |||||||||||| ||||| || |||||||| ||||||| ||   ||||||||||||||| | |||||||||    
T  4249252 aatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 9241028 - 9241103
Alignment:
Q  119 tcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||||||| |||||| ||| | || |||||| ||| ||||| ||  |||||||| |||||||||||||||||||||    
T  9241028 tcgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 39509145 - 39509070
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  | |||||  || ||||||||||||||||    
T  39509145 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 13901860 - 13901746
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| |||||||||||| ||||   | | ||| |||| ||||||||  |||| || ||||||||||  || | ||  |||||||||    
T  13901860 tttgaagaagctaaattaacccacctaaattaacattagatagaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccact 13901761  T
Q  174 aggccaacccaagtg 188  Q
    || ||||||||||||    
T  13901760 agaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 24124052 - 24124098
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccc 159  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||||    
T  24124052 agataatcgaacctcagacctcaaggaggaccacactcccaaatccc 24124098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 24234762 - 24234649
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||||||| |||||| |||||| ||||| ||  ||| |||||||| ||||||||  |||| || ||||||||||| |||| ||  ||||||||     
T  24234762 tttgaataagctaaattagcctacctaatttgac-tctgagagaatcgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacc 24234664  T
Q  174 aggccaacccaagtg 188  Q
     || |||||||||||    
T  24234663 tggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 47386750 - 47386808
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacct 133  Q
    ||||||||||||| ||||||||||||||||||||    ||| ||| |||||||||||||    
T  47386750 ttgaagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacct 47386808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 30584783 - 30584836
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgaga 130  Q
    |||||| |||| ||||| || |||||||||||||  ||||||||||||||||||    
T  30584783 gaagaaactaaattagctcatctaaattgacatcggagataatcgaacctgaga 30584836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 30938177 - 30938278
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  || ||||||||||||| |||    || ||||||||||||||||| ||||| || |||||||| | ||||| |   |||||||||    
T  30938177 tttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccact 30938276  T
Q  174 ag 175  Q
    ||    
T  30938277 ag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 7292799 - 7292871
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 189  Q
    ||||||||||||||| | ||||| || ||||||||||  | || ||  ||||||||||| |||||||||||||    
T  7292799 aatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 42644907 - 42644963
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaatac 169  Q
    ||||||||||||||||||| | |||||||| ||||||| || ||||| ||| |||||    
T  42644907 agataatcgaacctgagactttgaggaagaacacactctcagatcccaagtcaatac 42644963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 41591 - 41710
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||| ||||| |||||||||| |||||||||||  ||| ||| ||||||||||||| ||||| || || |||| || ||| | ||  |||||||||    
T  41591 tttgaagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccact 41690  T
Q  174 aggccaacccaagtgggtta 193  Q
    ||||||||||||||||||||    
T  41691 aggccaacccaagtgggtta 41710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 29503388 - 29503271
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| || |||||| |||||||||| ||  || ||||||||||||||||| ||||| || ||||||||||  |||| |   |||||||||    
T  29503388 tttgaagaagctaaatttgcccacttaaattgaca-ccgggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccact 29503290  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  29503289 aggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 42327357 - 42327471
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||| ||||| |||||||||| |||||| || |  ||| ||||||||||||||||| ||||| || ||||||||||  |||| ||  |||||||||||||    
T  42327357 aagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggc 42327456  T
Q  178 caacccaagtgggtt 192  Q
    |||||||||||||||    
T  42327457 caacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 1435181 - 1435064
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| ||||||||| |  ||| |||||||| |||||||| |||||  | |||||||| ||||||| ||  | |||||||    
T  1435181 tttgaagaagctaaattagcccacccaaattgacaccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccact 1435083  T
Q  174 aggccaacccaagtgggtt 192  Q
    | |||||||||||||||||    
T  1435082 atgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 42602672 - 42602554
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| |||||| || |  ||| |||| ||||| |||||| ||| | || ||||||||||  |||| ||  |||||||||    
T  42602672 tttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccact 42602573  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  42602572 aggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 11251205 - 11251087
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||| ||| ||||| |||||||||||||| |  ||| |||| |||||||||||| ||||| || |||||| |||| |||| ||  |||||||||    
T  11251205 tttgaataagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccact 11251106  T
Q  174 aggccaacccaagtgggtt 192  Q
    | ||||||| |||||||||    
T  11251105 aagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 37480193 - 37480075
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||| ||||||  | |   || ||||||||||||||||| ||||| || ||||||| ||  |||| ||  ||||||||     
T  37480193 tttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccacc 37480094  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||||||||||    
T  37480093 aggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 4438980 - 4439057
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||||||| || ||||| ||||| || ||||||| || ||||| ||||||||||| ||||||||||||||||||||||    
T  4438980 aatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttat 4439057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 14500352 - 14500277
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||| ||||||||||||||| || |||||||||| ||| | || | ||||||||||||||| |||||||||||    
T  14500352 aatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 28846805 - 28846690
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||| ||| |||| | ||| |||||||||||   |||||||||||||||||| | ||||| || ||||||||||  |||| ||| |||||||||||      
T  28846805 aagaagttaaattagtctacccaaattgacatcggtgataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagat 28846706  T
Q  178 caacccaagtgggtta 193  Q
    ||||| ||||||||||    
T  28846705 caacctaagtgggtta 28846690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 34041589 - 34041664
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||| |||||||||||| ||||| || ||||||| || ||||  ||| ||||||||||||||||||||||||||||    
T  34041589 aatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 39715067 - 39714992
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| ||||| || ||||||||||  |||| ||| |||||||| | |||||||||||||||||    
T  39715067 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 3001493 - 3001383
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    ||||| |||| ||||||||| |||| || || |  |||||||||||||||||| ||  |||| || |||||||| | ||| | ||| |||||||||||||    
T  3001493 aagaacctaaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggc 3001394  T
Q  178 caacccaagtg 188  Q
    |||||||||||    
T  3001393 caacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 25637269 - 25637184
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccc 159  Q
    |||||||||| ||| ||||||||||||||||| ||||  ||| || |||||||||||||| ||| | || |||||||||| |||||    
T  25637269 tttgaagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatccc 25637184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 38854420 - 38854485
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    |||||||||||||| |||||||||||||||||||  |   |||||||||||||||||||| |||||    
T  38854420 tttgaagaagctaaattagcccacctaaattgaccccggtgataatcgaacctgagaccttgagga 38854485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 1729880 - 1729816
Alignment:
Q  128 agacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||| || ||||||||||| |||| ||  ||||||||||| ||||||||||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 23052524 - 23052600
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    ||||||||||||||||| |||||  | ||||||||||| |||| ||  |||||||| ||||||||| ||||||||||    
T  23052524 aatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtta 23052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 33582091 - 33582015
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 150  Q
    |||||||||||||| |||| ||||||||||||||||   ||| |||||||||||||||||  |||| || |||||||    
T  33582091 tttgaagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 40416391 - 40416467
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtta 193  Q
    |||||||||||||||||  |||| || || |||||||  | || ||| |||||||||||||||||||||||||||||    
T  40416391 aatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 7798994 - 7799111
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||| || ||||||| ||    ||| ||||||| |||||| || ||||| || ||||||||||| |||| ||  ||||||||     
T  7798994 tttgaagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccacc 7799092  T
Q  174 aggccaacccaagtgggtt 192  Q
    ||| |||||||||||||||    
T  7799093 aggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 16918579 - 16918653
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggt 191  Q
    |||| ||||| |||||| ||||| || |||||||||| ||||| |   |||||||||||||||||||||||||||    
T  16918579 aatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 21195638 - 21195752
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||||||| | |||||||||    ||  ||||||||||||||||| ||||| || ||||||||||| | || ||   |||||||||||     
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactaggg 21195737  T
Q  178 caacccaagtgggtt 192  Q
    |||||||| ||||||    
T  21195738 caacccaaatgggtt 21195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 192
Target Start/End: Complemental strand, 26545950 - 26545840
Alignment:
Q  82 agctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaac 181  Q
    |||||| ||| |||||||||||||| |||  ||| |||| ||| |||||||| ||| | || |||||| ||| ||||| || ||||||||| |  |||||    
T  26545950 agctaaattaacccacctaaattgatatcgaagagaatcaaacttgagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaac 26545851  T
Q  182 ccaagtgggtt 192  Q
    |||||||||||    
T  26545850 ccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 29197334 - 29197452
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||| ||| ||| ||||||||||||||||| || |    | |||||||| |||||| |  |||| || ||||||||||| |||| ||| ||||||||     
T  29197334 tttgaaaaagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccacc 29197433  T
Q  174 aggccaacccaagtgggtt 192  Q
    | |||||||||||||||||    
T  29197434 aagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 11062435 - 11062358
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||| |||||||||||| |||||  | ||||||||||| | || ||  |||| |||||||||||||||||||||||||    
T  11062435 aatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttat 11062358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 19244222 - 19244109
Alignment:
Q  79 agaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggcc 178  Q
    |||| |||| |||||||||  |||||| || |  ||| ||||||||||||||||| | ||| || ||||||| ||  |||| ||| ||||||| ||| ||    
T  19244222 agaaactaaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagacc 19244123  T
Q  179 aacccaagtgggtt 192  Q
    ||||||||||||||    
T  19244122 aacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 38856120 - 38856185
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    |||||||||||||| |||||||| | |||| |||| | ||||||||||||| |||||||| |||||    
T  38856120 tttgaagaagctaaattagcccatcgaaatggacaccgtagataatcgaacatgagaccttgagga 38856185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 5147680 - 5147764
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttatgaaatat 201  Q
    ||||||| | ||||||| ||| | || || ||||||| ||| | ||| ||||||||||| |||||||||||||||||| ||||||    
T  5147680 aatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttattaaatat 5147764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 31573600 - 31573656
Alignment:
Q  75 ttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagac 131  Q
    ||||||||| ||| |||| |||||||||||||||||  ||| |||||||||||||||    
T  31573600 ttgaagaagttaaattagtccacctaaattgacatcgaagagaatcgaacctgagac 31573656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 35203341 - 35203417
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactc 150  Q
    |||||||||||||| ||| ||||| |||||||||| |  |||||||||||| |||||| | ||||| || |||||||    
T  35203341 tttgaagaagctaaattaacccacttaaattgacaccaaagataatcgaacatgagactttgaggatgagcacactc 35203417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 42922490 - 42922414
Alignment:
Q  117 aatcgaacctgagaccta-gaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||||||||  ||||| || ||||||||||  | || ||  ||||||||||||||||||||||||||||    
T  42922490 aatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 11738041 - 11738120
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggtt 192  Q
    |||||||||||||||| || | ||||| || ||||||| || ||| ||||| ||||||||||  ||||| ||||||||||    
T  11738041 agataatcgaacctgaaactttgaggaggaacacactctcagatctctagtcaataccactaatccaactcaagtgggtt 11738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 35916189 - 35916086
Alignment:
Q  89 ttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 188  Q
    ||||||||| ||||||||||||   ||  |||||| |||||| || ||||| || |||||||  ||||| | ||| |||||||| || ||||||||||||    
T  35916189 ttagcccacttaaattgacatcgaggaggatcgaatctgagatcttgaggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtg 35916090  T
Q  189 ggtt 192  Q
    ||||    
T  35916089 ggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 13803587 - 13803493
Alignment:
Q  100 aaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||||| ||||  ||||||||||||||||||||| ||||| || |||||||| || || | ||  |||| ||||||  |||||||| ||||||||    
T  13803587 aaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggttat 13803493  T

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Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 21213887 - 21213777
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||| ||  |||||||||||||||| || |   || |||||||||||||||||  |||| || ||||||||||  |||| ||  ||||||||     
T  21213887 tttgaagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccacc 21213788  T
Q  174 aggccaaccca 184  Q
    || ||||||||    
T  21213787 agaccaaccca 21213777  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 2311842 - 2311777
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    ||||||||||| || |||||||||  ||||||||| |  ||| ||||||||||||||||| |||||    
T  2311842 tttgaagaagccaaattagcccactcaaattgacaccgaagaaaatcgaacctgagacctcgagga 2311777  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 9776403 - 9776313
Alignment:
Q  93 cccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaa 185  Q
    ||||||||||||  ||||  |||||||||||||||||| || || || || ||||   ||||||||| ||| |||||||||||| ||||||||    
T  9776403 cccacctaaattagcatcagagataatcgaacctgagatcttgaagatgagcacat--ccaaatcccaagtcaataccactaggtcaacccaa 9776313  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 12994377 - 12994454
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    |||||||| ||||||||  |||| || ||||||||||  |||| ||| ||||||||||| ||||| |||| |||||||    
T  12994377 aatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggttat 12994454  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 32687556 - 32687479
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgggttat 194  Q
    ||||||||||||||||| ||||| || ||||||| ||| |||| |  ||||||||| ||  |||||||||||| ||||    
T  32687556 aatcgaacctgagacctcgaggaggaacacactctcaagtcccaaactaataccacaagaacaacccaagtggattat 32687479  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 37755929 - 37756046
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||  |||||| ||||  ||  | |||||| |||||||| ||| | || |||| |||||  |||| ||  ||||||||     
T  37755929 tttgaagaagctaaattagcccactcaaattggcatcagagggagtcgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccacc 37756028  T
Q  174 aggccaacccaagtgggt 191  Q
    | ||||||||||||||||    
T  37756029 aagccaacccaagtgggt 37756046  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 37972013 - 37971956
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagac 131  Q
    |||| ||||||||| ||||||||||||||||| || |  ||| |||||||||||||||    
T  37972013 tttgtagaagctaaattagcccacctaaattggcaccggagagaatcgaacctgagac 37971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 41908596 - 41908673
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcc 151  Q
    ||||||||||||||  ||||||||| |||||| || |   ||||||||||| |||||||| ||||| || ||||||||    
T  41908596 tttgaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactcc 41908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 16381704 - 16381732
Alignment:
Q  166 ataccactaggccaacccaagtgggttat 194  Q
    |||||||||||||||||||||||||||||    
T  16381704 ataccactaggccaacccaagtgggttat 16381732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 33569859 - 33569935
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaa-taccactaggccaacccaagtgggtt 192  Q
    ||||||||||||||||| |||||||| |||||| |||| |||  ||  || |||||||| ||||||||| |||||||    
T  33569859 aatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaacccatgtgggtt 33569935  T

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Target: scaffold0211 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 24168 - 24053
Alignment:
Q  77 gaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactagg 176  Q
    ||||||| ||| |||||||||  |||||| ||||  |||||||||||||||| || | || || || |||||||| || |||| ||| ||||||| ||||    
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  177 ccaacccaagtgggtt 192  Q
    ||||||||||||||||    
T  24068 ccaacccaagtgggtt 24053  T

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Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 112396 - 112282
Alignment:
Q  78 aagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggc 177  Q
    |||||||||| |||| |||||||||||| || |  ||| |||||||||| ||||||  | || ||||||||||||| || || ||  ||||| || ||||    
T  112396 aagaagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggc 112297  T
Q  178 caacccaagtgggtt 192  Q
    |||||||||||||||    
T  112296 caacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 13021 - 13118
Alignment:
Q  91 agcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtg 188  Q
    |||||||| |||||||||||  ||| ||||||||||||||||| ||||| || |||||||||| ||| | ||  |||||||| | ||||||| |||||    
T  13021 agcccacccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 6880 - 6988
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| |||||||||  ||||||||| |  ||   |||||||||||||| | ||||| || ||||||||| | |||| ||  |||||||||    
T  6880 tttgaagaagctaaattagcccactcaaattgacaccagag---atcgaacctgagactttgaggaggagcacactccccagtcccaagccaataccact 6976  T
Q  174 aggccaacccaa 185  Q
    ||||||||||||    
T  6977 aggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 94968 - 95044
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaagtgg 189  Q
    ||||||| ||||||||||||| ||||| || ||||||||||  | || ||  |||||||||||||||||||||||||    
T  94968 agataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 42479 - 42596
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    |||||||||||||| ||| ||| | ||||||| || |  ||| |||||||||||||||   ||||| || || ||||||| || || ||| |||||||||    
T  42479 tttgaagaagctaaattaaccc-cttaaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccact 42577  T
Q  174 aggccaacccaagtgggtt 192  Q
    |||||||||||| ||||||    
T  42578 aggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 11603 - 11534
Alignment:
Q  117 aatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccactaggccaacccaag 186  Q
    ||||||||||||||||| ||||| || |||||||||| ||||| ||  |||||||| |||||| ||||||    
T  11603 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 42622 - 42687
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagagga 139  Q
    |||||||||| ||| |||||||||||||||||||| | |||| |||||||| ||||| || |||||    
T  42622 tttgaagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgagatcttgagga 42687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 8639 - 8685
Alignment:
Q  113 agataatcgaacctgagacctagaggaagaccacactcccaaatccc 159  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||||    
T  8639 agataatcgaacctcagacctcaaggaggaccacactcccaaatccc 8685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 25305 - 25406
Alignment:
Q  74 tttgaagaagctaagttagcccacctaaattgacatcctagataatcgaacctgagacctagaggaagaccacactcccaaatccctagttaataccact 173  Q
    ||||||||||||||  |||| ||   ||||||||| |  ||||||||||||||||||||| ||| | || ||||||||||| || | ||  |||||||||    
T  25305 tttgaagaagctaaaatagctcattcaaattgacaccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccact 25404  T
Q  174 ag 175  Q
    ||    
T  25405 ag 25406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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