View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16378_high_86 (Length: 264)
Name: NF16378_high_86
Description: NF16378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16378_high_86 |
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Alignment Details
Target: chr7 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 4903868 - 4903963
Alignment:
| Q |
159 |
gcacacaacagtttaaaccagaatactatacctaatttcaatgcttcctctaaaaataaaagaaaacaaattaccaataatgttgtggagttcatc |
254 |
Q |
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| T |
4903868 |
gcacacaacagtttaaaccagaattctatacctaatttcaatgcttcctctaaaaataaaagaaaacaaattaccaataatgttgtggagttcatc |
4903963 |
T |
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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 4903700 - 4903743
Alignment:
| Q |
21 |
ttagggactatcatgtctaggctttatcgttttcaatgtaccaa |
64 |
Q |
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| T |
4903700 |
ttagggactatcatgtctaagctttatcgttttcattgcaccaa |
4903743 |
T |
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