View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16378_high_92 (Length: 249)

Name: NF16378_high_92
Description: NF16378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16378_high_92
NF16378_high_92
[»] chr7 (30 HSPs)
chr7 (1-236)||(30630352-30630587)
chr7 (1-236)||(22194348-22194583)
chr7 (1-236)||(25218009-25218243)
chr7 (6-187)||(5813447-5813628)
chr7 (1-150)||(33379491-33379641)
chr7 (38-232)||(1939676-1939858)
chr7 (5-100)||(24793686-24793781)
chr7 (1-109)||(35028537-35028646)
chr7 (1-81)||(37888656-37888736)
chr7 (38-181)||(32126994-32127136)
chr7 (38-181)||(32749139-32749281)
chr7 (38-181)||(40690511-40690653)
chr7 (38-181)||(26815311-26815453)
chr7 (60-181)||(42881781-42881902)
chr7 (60-180)||(40300707-40300827)
chr7 (38-143)||(114900-115004)
chr7 (60-181)||(22660060-22660181)
chr7 (38-157)||(43201680-43201799)
chr7 (38-181)||(45549131-45549272)
chr7 (9-61)||(48985184-48985236)
chr7 (195-236)||(5813410-5813451)
chr7 (38-119)||(33508353-33508433)
chr7 (38-119)||(39769976-39770056)
chr7 (38-130)||(33078558-33078649)
chr7 (38-106)||(38970311-38970378)
chr7 (38-81)||(35192857-35192900)
chr7 (60-131)||(36521734-36521805)
chr7 (38-108)||(20354519-20354587)
chr7 (61-106)||(38351876-38351921)
chr7 (38-106)||(37952039-37952106)
[»] chr6 (19 HSPs)
chr6 (1-236)||(6377196-6377431)
chr6 (1-236)||(17958064-17958299)
chr6 (1-236)||(634802-635037)
chr6 (1-236)||(29951792-29952027)
chr6 (1-148)||(34328608-34328755)
chr6 (38-236)||(7540347-7540533)
chr6 (1-119)||(2503582-2503700)
chr6 (1-110)||(198072-198181)
chr6 (38-183)||(24115224-24115369)
chr6 (5-100)||(32360006-32360100)
chr6 (60-180)||(8222291-8222411)
chr6 (38-170)||(18642444-18642575)
chr6 (38-183)||(12502085-12502229)
chr6 (38-181)||(12513201-12513346)
chr6 (60-181)||(34242598-34242716)
chr6 (38-181)||(26653897-26654039)
chr6 (38-181)||(26759866-26760008)
chr6 (60-131)||(34841714-34841785)
chr6 (145-183)||(34242530-34242568)
[»] chr5 (28 HSPs)
chr5 (1-236)||(31011795-31012030)
chr5 (1-236)||(4580129-4580364)
chr5 (1-236)||(25033320-25033543)
chr5 (5-187)||(21367757-21367939)
chr5 (5-236)||(7827247-7827465)
chr5 (1-184)||(41152591-41152774)
chr5 (1-98)||(41263689-41263786)
chr5 (1-80)||(8176085-8176163)
chr5 (5-100)||(25653073-25653175)
chr5 (38-180)||(36609795-36609937)
chr5 (38-143)||(25670549-25670653)
chr5 (38-181)||(32363200-32363342)
chr5 (38-143)||(27405927-27406031)
chr5 (62-161)||(30644814-30644913)
chr5 (38-160)||(42804527-42804648)
chr5 (60-180)||(29616264-29616384)
chr5 (38-169)||(13479337-13479467)
chr5 (38-120)||(177391-177473)
chr5 (38-111)||(15972845-15972918)
chr5 (38-106)||(4219159-4219226)
chr5 (38-106)||(39008770-39008837)
chr5 (63-119)||(39238794-39238850)
chr5 (60-131)||(40892029-40892100)
chr5 (61-106)||(23089796-23089841)
chr5 (196-236)||(36609751-36609791)
chr5 (60-131)||(27945859-27945930)
chr5 (60-131)||(32973150-32973221)
chr5 (198-236)||(41152776-41152814)
[»] chr4 (39 HSPs)
chr4 (1-236)||(53181197-53181432)
chr4 (1-225)||(21654568-21654792)
chr4 (1-236)||(46914255-46914478)
chr4 (1-236)||(2212061-2212284)
chr4 (1-236)||(36658574-36658797)
chr4 (1-156)||(47749793-47749948)
chr4 (5-156)||(19409682-19409833)
chr4 (1-119)||(27141926-27142044)
chr4 (1-93)||(7401442-7401534)
chr4 (1-77)||(10090033-10090109)
chr4 (38-181)||(23539423-23539565)
chr4 (38-181)||(28901133-28901275)
chr4 (38-181)||(33607195-33607337)
chr4 (63-181)||(35809578-35809696)
chr4 (38-181)||(27864092-27864234)
chr4 (60-181)||(16171657-16171778)
chr4 (60-181)||(28447423-28447544)
chr4 (60-181)||(34463311-34463432)
chr4 (1-62)||(40596478-40596539)
chr4 (38-181)||(53347430-53347575)
chr4 (63-181)||(13093929-13094047)
chr4 (38-160)||(28901314-28901435)
chr4 (60-181)||(3530031-3530152)
chr4 (60-181)||(8994932-8995053)
chr4 (60-183)||(33077632-33077755)
chr4 (38-180)||(34434284-34434424)
chr4 (60-181)||(13113710-13113831)
chr4 (38-111)||(39048804-39048877)
chr4 (9-61)||(31848516-31848568)
chr4 (60-143)||(34199031-34199114)
chr4 (60-180)||(56054437-56054552)
chr4 (92-170)||(33523627-33523705)
chr4 (63-119)||(48403668-48403724)
chr4 (63-119)||(19273164-19273220)
chr4 (60-131)||(3615011-3615082)
chr4 (60-139)||(18469117-18469196)
chr4 (197-236)||(33607086-33607125)
chr4 (38-111)||(17329647-17329719)
chr4 (38-98)||(4981931-4981990)
[»] chr3 (50 HSPs)
chr3 (1-236)||(25787474-25787709)
chr3 (1-236)||(25829431-25829666)
chr3 (1-236)||(33751432-33751667)
chr3 (6-236)||(33936307-33936537)
chr3 (1-236)||(42598129-42598364)
chr3 (8-236)||(49822670-49822898)
chr3 (1-236)||(51435746-51435981)
chr3 (1-236)||(50020118-50020353)
chr3 (1-224)||(42602002-42602225)
chr3 (1-187)||(17469585-17469771)
chr3 (1-187)||(47147442-47147628)
chr3 (1-187)||(50034459-50034645)
chr3 (1-165)||(49086328-49086492)
chr3 (1-148)||(5844737-5844884)
chr3 (5-140)||(30688624-30688759)
chr3 (43-187)||(21228291-21228435)
chr3 (38-236)||(51974373-51974558)
chr3 (39-187)||(21229361-21229509)
chr3 (1-98)||(25450199-25450296)
chr3 (3-84)||(49357010-49357091)
chr3 (38-181)||(33187852-33187994)
chr3 (38-181)||(49027159-49027301)
chr3 (6-80)||(37410205-37410279)
chr3 (38-170)||(12975028-12975159)
chr3 (38-170)||(20139745-20139876)
chr3 (38-181)||(26162279-26162421)
chr3 (38-181)||(43475603-43475745)
chr3 (38-181)||(51304746-51304888)
chr3 (60-181)||(10424428-10424549)
chr3 (60-181)||(42564123-42564244)
chr3 (38-143)||(48886572-48886676)
chr3 (38-181)||(36178222-36178364)
chr3 (60-181)||(6045104-6045225)
chr3 (38-98)||(15493530-15493590)
chr3 (38-120)||(31170006-31170087)
chr3 (61-181)||(4873913-4874033)
chr3 (38-93)||(47700694-47700749)
chr3 (195-236)||(17469548-17469589)
chr3 (195-236)||(21228254-21228295)
chr3 (195-236)||(47147405-47147446)
chr3 (195-236)||(50034422-50034463)
chr3 (38-106)||(11908299-11908366)
chr3 (195-226)||(21229505-21229536)
chr3 (60-131)||(30415223-30415294)
chr3 (155-185)||(30688755-30688785)
chr3 (199-233)||(30688787-30688821)
chr3 (38-100)||(35472057-35472118)
chr3 (145-187)||(49027331-49027373)
chr3 (60-101)||(6832880-6832921)
chr3 (38-98)||(51999809-51999868)
[»] chr2 (28 HSPs)
chr2 (1-236)||(12858011-12858246)
chr2 (1-236)||(30819383-30819618)
chr2 (1-236)||(9072686-9072921)
chr2 (5-236)||(31185007-31185238)
chr2 (8-236)||(39432483-39432699)
chr2 (1-187)||(8855168-8855354)
chr2 (1-236)||(36855121-36855343)
chr2 (1-179)||(37245831-37246009)
chr2 (5-239)||(31204733-31204955)
chr2 (4-187)||(2778868-2779051)
chr2 (5-236)||(926570-926789)
chr2 (1-119)||(4296368-4296486)
chr2 (38-181)||(6363577-6363719)
chr2 (38-181)||(7762923-7763065)
chr2 (60-181)||(5145139-5145260)
chr2 (60-180)||(4279281-4279401)
chr2 (38-170)||(17928948-17929079)
chr2 (60-181)||(22349674-22349795)
chr2 (38-143)||(36209203-36209307)
chr2 (38-110)||(16218480-16218552)
chr2 (86-169)||(39490326-39490409)
chr2 (1-39)||(1987459-1987497)
chr2 (38-106)||(17486104-17486171)
chr2 (195-236)||(8855131-8855172)
chr2 (38-106)||(1308422-1308489)
chr2 (60-131)||(7585296-7585367)
chr2 (63-138)||(14009592-14009666)
chr2 (195-236)||(2779047-2779088)
[»] chr1 (32 HSPs)
chr1 (1-236)||(45242172-45242407)
chr1 (1-236)||(52930409-52930632)
chr1 (1-236)||(17786377-17786600)
chr1 (1-187)||(31471357-31471543)
chr1 (1-148)||(37419941-37420088)
chr1 (1-148)||(27630057-27630204)
chr1 (1-119)||(37646153-37646271)
chr1 (5-100)||(8464822-8464917)
chr1 (54-183)||(18317587-18317716)
chr1 (38-181)||(51523454-51523596)
chr1 (1-107)||(44450982-44451088)
chr1 (1-107)||(44651324-44651430)
chr1 (38-180)||(29524089-29524230)
chr1 (38-180)||(45363667-45363808)
chr1 (38-180)||(17676095-17676235)
chr1 (60-181)||(47297353-47297474)
chr1 (38-169)||(8471413-8471542)
chr1 (38-180)||(33167401-33167545)
chr1 (38-181)||(51156425-51156567)
chr1 (86-180)||(48407548-48407642)
chr1 (38-143)||(36231141-36231244)
chr1 (60-181)||(48384951-48385072)
chr1 (60-180)||(31159611-31159731)
chr1 (38-110)||(48927129-48927201)
chr1 (9-61)||(643565-643617)
chr1 (38-111)||(36303341-36303414)
chr1 (38-111)||(48729681-48729754)
chr1 (38-115)||(45455646-45455722)
chr1 (5-45)||(20584539-20584579)
chr1 (195-236)||(31471320-31471361)
chr1 (40-81)||(38212635-38212676)
chr1 (60-131)||(2474886-2474957)
[»] chr8 (37 HSPs)
chr8 (1-236)||(13817171-13817406)
chr8 (6-236)||(5736149-5736379)
chr8 (1-236)||(5213917-5214152)
chr8 (1-236)||(26748676-26748899)
chr8 (1-187)||(8449751-8449937)
chr8 (1-187)||(35101566-35101752)
chr8 (6-179)||(36912745-36912918)
chr8 (5-239)||(17744707-17744929)
chr8 (60-236)||(27392608-27392772)
chr8 (6-153)||(34955055-34955202)
chr8 (1-119)||(43617945-43618063)
chr8 (6-98)||(18029068-18029160)
chr8 (1-93)||(26414466-26414558)
chr8 (6-81)||(4625244-4625319)
chr8 (60-181)||(15056760-15056881)
chr8 (38-181)||(13947649-13947791)
chr8 (60-181)||(13783953-13784074)
chr8 (60-181)||(43524012-43524133)
chr8 (1-62)||(26631869-26631930)
chr8 (1-62)||(30470535-30470596)
chr8 (1-61)||(42860991-42861051)
chr8 (38-181)||(1633159-1633301)
chr8 (60-143)||(30529410-30529493)
chr8 (38-170)||(38204971-38205102)
chr8 (38-112)||(29731938-29732011)
chr8 (63-119)||(26244877-26244933)
chr8 (38-119)||(231593-231674)
chr8 (38-119)||(708004-708085)
chr8 (38-119)||(745216-745297)
chr8 (38-119)||(869111-869192)
chr8 (5-90)||(17494325-17494409)
chr8 (195-236)||(35101529-35101570)
chr8 (38-111)||(44503519-44503591)
chr8 (63-119)||(40283855-40283911)
chr8 (60-131)||(1955013-1955084)
chr8 (60-98)||(23550011-23550049)
chr8 (61-98)||(44150168-44150205)
[»] scaffold0758 (1 HSPs)
scaffold0758 (5-236)||(6440-6657)
[»] scaffold0007 (2 HSPs)
scaffold0007 (38-187)||(166140-166289)
scaffold0007 (195-239)||(166285-166329)
[»] scaffold0021 (1 HSPs)
scaffold0021 (38-181)||(109954-110096)
[»] scaffold0004 (1 HSPs)
scaffold0004 (38-181)||(106022-106164)
[»] scaffold1905 (2 HSPs)
scaffold1905 (38-180)||(107-248)
scaffold1905 (38-106)||(1175-1242)
[»] scaffold1454 (1 HSPs)
scaffold1454 (38-170)||(468-599)
[»] scaffold0012 (1 HSPs)
scaffold0012 (38-79)||(124317-124358)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 30630352 - 30630587
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30630352 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaa 30630451  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  30630452 ttttctaattacccatataactacgaaaatcccaacaattatccaagtccaaatcaatttttcaaccaacgtcctcaaaacatacatcaaaacgtaccta 30630551  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  30630552 attttggttttgcaccaaatttcaaccagtcatcct 30630587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 22194583 - 22194348
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22194583 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 22194484  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  22194483 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 22194384  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22194383 attttggtttttcaccaaatttcaaccagtcatcct 22194348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 25218009 - 25218243
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25218009 cttcatcttattattatctttctattag-aaactaagtaaagttttaatattattttttgtgaaatggatcccaataataatcatttcaacacccaaaat 25218107  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25218108 ttttctaattacccatttaactacgaaaatcccaacaattattcaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaacgtaccta 25218207  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  25218208 attttggttttgcaccaaatttcaaccagtcatcct 25218243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 5813628 - 5813447
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||    
T  5813628 tcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattc 5813529  T
Q  106 taattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5813528 taattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 5813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 33379641 - 33379491
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagtttt-aatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaa 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  33379641 cttcatcttattattatctttctagtagcaaactaagtgaagtttttaatcttatttttagtgaaatggatcccaataataacaatttcaacacccaaaa 33379542  T
Q  100 tttttctaattacccatttaactacgaaaatcccaacaattatccaaatcc 150  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  33379541 tttttctaattacccatctaactacgaaaatctcaacaattatccaaatcc 33379491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 38 - 232
Target Start/End: Original strand, 1939676 - 1939858
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||||||||||| || |||| ||||||||| |||||||  ||| ||||||||||||    
T  1939676 tgaagtgttaatcttctttttagtgaaatggatcccaataataatcatttcaacactcagaattcttctaattatccatttagttaccaaaatcccaaca 1939775  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattttggttttgcaccaaatttcaaccagtca 232  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||            |||||||||||||||||||||||||||| |||||    
T  1939776 attatcaaaatcgaaatcaattttccaaccaacgtcctcaaaacatacc------------taattttggttttgcaccaaatttcaacaagtca 1939858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 24793781 - 24793686
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24793781 atcttattattatctttctattagcaagctaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaat 24793686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 35028537 - 35028646
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatccc-aataataaccatttcaacacccaaaa 99  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  35028537 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaaataataaccatttcaacaaccaaaa 35028636  T
Q  100 tttttctaat 109  Q
    || |||||||    
T  35028637 ttattctaat 35028646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37888736 - 37888656
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataa 81  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  37888736 cttcatctaattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatgtatcccaataataa 37888656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 32126994 - 32127136
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||  |||  ||||||||||||    
T  32126994 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttggctatcaaaatcccaaca 32127092  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  32127093 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 32127136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 32749281 - 32749139
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  32749281 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 32749183  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  32749182 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 32749139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 40690653 - 40690511
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  40690653 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 40690555  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  40690554 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 40690511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 26815453 - 26815311
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| |||| ||||| |||||  |||  ||||||||||||    
T  26815453 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattactcatttggctatcaaaatcccaaca 26815355  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  26815354 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 26815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 42881902 - 42881781
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||||||    
T  42881902 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatcaatt 42881803  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  42881802 tcccaaccaacatcctcaaaac 42881781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 40300707 - 40300827
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    |||||||||||| || ||| || || |||||||||||||||| |||| ||||| | |||| |||| |||||||||||||||||| | | |||||||||||    
T  40300707 gtgaaatggatcacactaacaatcaattcaacacccaaaattcttctgattactcttttagctaccaaaatcccaacaattatcaacacccaaatcaatt 40300806  T
Q  160 tttcaaccaacgtcctcaaaa 180  Q
    |  |||||||| |||||||||    
T  40300807 taccaaccaacatcctcaaaa 40300827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 115004 - 114900
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || ||||||| | |||||| |||| |||| ||||||| |||| ||||||||||||    
T  115004 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacatctaaaattcttctgattagccatttagctaccaaaatcccaaca 114906  T
Q  138 attatc 143  Q
    ||||||    
T  114905 attatc 114900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 22660181 - 22660060
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || ||||||| |||||||| |||| ||||||| |||| |||| |||||  ||||||||||| | | |||||||||||    
T  22660181 gtgaaatggatcccactaacaatcaattcaacatccaaaattcttctgattacccttttagctaccaaaatttcaacaattatcaacacccaaatcaatt 22660082  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  22660081 tcccaaccaacatcctcaaaac 22660060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 43201680 - 43201799
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| || | ||||| |||||||||||||||||||||| ||||| ||||| || |||| |||| ||||  |||||| |||| |||||||||       
T  43201680 tgaagttttagtcatttttttagtgaaatggatcccaataataatcatttgaacactcagaattcttctgattattcatttagctaccaaaatcccacag 43201779  T
Q  138 attatccaaatccaaatcaa 157  Q
    |||||||| |||||||||||    
T  43201780 attatccacatccaaatcaa 43201799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 45549131 - 45549272
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || ||||||||||||||||||| || ||||| |||||||||| |||| ||||  |||||| |||| |||||||| |||    
T  45549131 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaa-acccaaaattcttctgattaatcatttagctaccaaaatccctaca 45549228  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  45549229 attatcaacagccaaatcaatttcccaaccaacatcttcaaaac 45549272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 48985236 - 48985184
Alignment:
Q  9 tattattatctttctattagcaaactaagtgaagttttaatcttattttttgt 61  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48985236 tattattatctttctattagtaaactaagtgaagttttaatcttatttgttgt 48985184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 5813451 - 5813410
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  5813451 tacctaattttggttttccaccaaatttcaaccaatcatcct 5813410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 33508353 - 33508433
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    |||||||||| |||| | ||| ||||||||||||||||||| || || |||||||||||||||| |||| || | |||||||    
T  33508353 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaaattcttctgatcatccattta 33508433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 39770056 - 39769976
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    |||||||||| |||| | ||| ||||||||||| | |||||||| || |||||||||||||||| |||| |||| |||||||    
T  39770056 tgaagttttagtctt-tgtttagtgaaatggattcaaataataatcaattcaacacccaaaattcttctgattatccattta 39769976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 33078558 - 33078649
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaat 130  Q
    |||||||||| |||| | ||| ||||||||||||||| | | || || |||||||||||||||| |||| ||||| |||||| |||| |||||    
T  33078558 tgaagttttagtctt-tatttagtgaaatggatcccactgacaatcaattcaacacccaaaattcttctgattactcatttagctaccaaaat 33078649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 38970378 - 38970311
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| |||||||||||| ||||||||| || |||||||||||||||| ||||    
T  38970378 tgaagttttagtctt-tatttagtgaaatggatctcaataataatcaattcaacacccaaaattcttct 38970311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 35192857 - 35192900
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataa 81  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||    
T  35192857 tgaagttttaaacttctttttagtgaaatggatcccaataataa 35192900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 36521805 - 36521734
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  36521805 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 36521734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 20354587 - 20354519
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaa 108  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||| | ||||||||||||    
T  20354587 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacactc-aaatttttctaa 20354519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 38351921 - 38351876
Alignment:
Q  61 tgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    ||||||||||||||||||||| || |||||||| ||||||| ||||    
T  38351921 tgaaatggatcccaataataatcaattcaacacacaaaattcttct 38351876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 37952106 - 37952039
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| ||||||||||||||| ||| || || |||||||||||||||| ||||    
T  37952106 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcaattcaacacccaaaattcttct 37952039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6377196 - 6377431
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6377196 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 6377295  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  6377296 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 6377395  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6377396 attttggtttttcaccaaatttcaaccagtcatcct 6377431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 17958064 - 17958299
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17958064 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 17958163  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  17958164 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 17958263  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17958264 attttggtttttcaccaaatttcaaccagtcatcct 17958299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 635037 - 634802
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  635037 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 634938  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    ||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  634937 ttttctaattacccataaaaatacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 634838  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  634837 attttggtttttcaccaaatttcaaccagtcatcct 634802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 29951792 - 29952027
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  29951792 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataactatttcaacacccaaaaa 29951891  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||| |||||||    
T  29951892 ttttctaattacccatataactacgaaaatcccaacaattatctaattccaaatcaattttttaaccaacgtcctcaaaacatacatcaaaacgtaccta 29951991  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||| ||||| ||| ||||||||||||||||||||    
T  29951992 atttttgtttttcactaaatttcaaccagtcatcct 29952027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 34328755 - 34328608
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  34328755 cttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 34328656  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaat 148  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  34328655 tattctaattacccatttaactacgaaaatcccaacaattatccaaat 34328608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 7540533 - 7540347
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||| |||| ||||||||| ||||||| |||| ||||||||||||    
T  7540533 tgaagttttaatcttctttttagtgaaatggatcccaataataatcctttcaacacccataattcttctaattatccatttagctaccaaaatcccaaca 7540434  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||||            |||||||||||||||||||||||||||||||||| ||||||    
T  7540433 attatcaaaatccaaatcaattttccaaccaatgtcctcaaaacat------------acctaattttggttttgcaccaaatttcaaccaggcatcct 7540347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2503700 - 2503582
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  2503700 cttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 2503601  T
Q  101 ttttctaattacccattta 119  Q
    | |||||||||||||||||    
T  2503600 tattctaattacccattta 2503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 198181 - 198072
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  198181 cttcttcttattattatctttctattagcaaattaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 198082  T
Q  101 ttttctaatt 110  Q
    | ||||||||    
T  198081 tattctaatt 198072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 24115369 - 24115224
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||| ||||| |||| ||||| |||||||||||||||||||||| |||||||||||||| |||| |||| | |||| ||||| |||| ||||||| ||||    
T  24115369 tgaacttttagtcttttttttagtgaaatggatcccaataataatcatttcaacacccagaattcttctgaatacctatttagctaccaaaatccaaaca 24115270  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaacat 183  Q
    |||||| | ||||||||||||||  |||||||| ||||||||||||    
T  24115269 attatcaacatccaaatcaatttcccaaccaacatcctcaaaacat 24115224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 32360100 - 32360006
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||  || ||||| |||||||| |||||||||||||||||||||| |||||||||    
T  32360100 atcttattattatctttctattagcagactaagtgaagttttaa-attttttttagtgaaatgaatcccaataataaccatttcaagacccaaaat 32360006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 8222411 - 8222291
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||||||| || || |||||| ||||||||| |||| |||| ||||||| |||| |||||||||||||||||| | | |||||||||||    
T  8222411 gtgaaatggatcccaataacaatcaattcaacgcccaaaattcttctgattatccatttagctaccaaaatcccaacaattatcaacacccaaatcaatt 8222312  T
Q  160 tttcaaccaacgtcctcaaaa 180  Q
    |  || ||||| |||||||||    
T  8222311 tcccagccaacatcctcaaaa 8222291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 18642575 - 18642444
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| ||||  | |||| |||| ||||||||||||    
T  18642575 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctcattatacttttagctaccaaaatcccaaca 18642477  T
Q  138 attatccaaatccaaatcaatttttcaaccaac 170  Q
    |||||| | | ||||||||||||  ||||||||    
T  18642476 attatcaacacccaaatcaatttcccaaccaac 18642444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 12502229 - 12502085
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||| ||||| || || |||||||||||||||| ||||  ||| ||||||| |||| ||||||||||||    
T  12502229 tgaagttttagtctt-tatttagtgaaatggatccaaataacaatcaattcaacacccaaaattattctgcttatccatttagctaccaaaatcccaaca 12502131  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaacat 183  Q
    |||||| | | ||||||||||||  |||  ||| ||||||||||||    
T  12502130 attatcaacacccaaatcaatttcccaattaacatcctcaaaacat 12502085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 12513346 - 12513201
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaa---ctacgaaaatccca 134  Q
    |||||||||| |||| | ||| ||||||||||||||||||| || || ||||||| | |||||| |||| ||||||||||||    |||  |||||||||    
T  12513346 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacatctaaaattcttctgattacccatttattagctatcaaaatccca 12513248  T
Q  135 acaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    ||||||||| | ||||||||||||||  |||||||| ||||||||||    
T  12513247 acaattatcaacatccaaatcaatttgccaaccaacatcctcaaaac 12513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 34242716 - 34242598
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||||||||   || |||| ||||||||||| |||| |||| ||||||| |||| |||||||||||||||||| | | |||||||||||    
T  34242716 gtgaaatggatcccaataat---caattcagcacccaaaattcttctgattatccatttagctaccaaaatcccaacaattatcaacacccaaatcaatt 34242620  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| || |||||||    
T  34242619 tcccaaccaacatcttcaaaac 34242598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 26653897 - 26654039
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || |||||||| |||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||| | ||     
T  26653897 tgaagttttagtctt-tgtttagtaaaatggattccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatctctacg 26653995  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    || ||| | | ||||||||||||  |||||||| || |||||||    
T  26653996 atcatcaacagccaaatcaatttcccaaccaacatcttcaaaac 26654039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 26759866 - 26760008
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || |||||||| |||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||| | ||     
T  26759866 tgaagttttagtctt-tgtttagtaaaatggattccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatctctacg 26759964  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    || ||| | | ||||||||||||  |||||||| || |||||||    
T  26759965 atcatcaacagccaaatcaatttcccaaccaacatcttcaaaac 26760008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 34841785 - 34841714
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  34841785 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 34841714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 34242568 - 34242530
Alignment:
Q  145 aaatccaaatcaatttttcaaccaacgtcctcaaaacat 183  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  34242568 aaatccaaatcaattttccaaccaacatcctcaaaacat 34242530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 31011795 - 31012030
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31011795 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 31011894  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  31011895 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 31011994  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31011995 attttggtttttcaccaaatttcaaccagtcatcct 31012030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 4580364 - 4580129
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4580364 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaa 4580265  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  4580264 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 4580165  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  4580164 attttggtttttcaccaaatttcaaccagtcatcct 4580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 25033543 - 25033320
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||     
T  25033543 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttctagtgaaatggatcccaataataaccatttcaacacccaaaaa 25033444  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||    
T  25033443 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacat------------accta 25033356  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25033355 attttggttttacaccaaatttcaaccagtcatcct 25033320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 21367939 - 21367757
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  21367939 atcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattatt 21367840  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21367839 ctaattacccatttaactattaaattcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 21367757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 7827465 - 7827247
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||| ||    
T  7827465 atcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaatg-atctcaataataatcatttcaacacccaaaattatt 7827367  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||    
T  7827366 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacat------------acctaattt 7827279  T
Q  205 tggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||| ||||||||||||||||||||||||    
T  7827278 tggttttacaccaaatttcaaccagtcatcct 7827247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 41152591 - 41152774
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  41152591 cttcatcttattattatccttctattagcaaactaagtgaaattttaatattatttttagtgaaatggatctcaataataaccatttcaacacctaaaat 41152690  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacata 184  Q
    | ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41152691 tattctaattacccatttaactacggaaattccaacaattatccaaatccaaatcaatttttcaaccaacgttctcaaaacata 41152774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41263786 - 41263689
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  41263786 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagttaaatggatcccaataataaccatttcaacacccaaa 41263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8176085 - 8176163
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataata 80  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8176085 cttcttcttattattatctttc-attagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataata 8176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 25653175 - 25653073
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttatttttt---gtgaaatggatccca----ataataaccatttcaacacccaa 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||    |||||||||||||||| ||||||    
T  25653175 atcttattattatctttctattagcaaactaagtgaagttttaatctttttttttttagtgaaatggatcccaatatataataaccatttcaagacccaa 25653076  T
Q  98 aat 100  Q
    |||    
T  25653075 aat 25653073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 36609937 - 36609795
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||| | |||||||  | | |||  ||||||||| ||||||| |||  ||| ||||||||    
T  36609937 tgaagttttaatcttctttttagtgaaatggattccaataataatcctttcaacgtctagaatacttctaattatccatttagctatcaaactcccaaca 36609838  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    |||||| |||| ||||| |||||||||||| ||||||||||||    
T  36609837 attatcaaaattcaaattaatttttcaacctacgtcctcaaaa 36609795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 25670549 - 25670653
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  25670549 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 25670647  T
Q  138 attatc 143  Q
    ||||||    
T  25670648 attatc 25670653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 32363200 - 32363342
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || ||||||||| |||||| |||| |||||||||||| |||| ||||||||||||    
T  32363200 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacctaaaattcttctgattacccatttagctaccaaaatcccaaca 32363298  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | | ||||||||||  | |||||| || |||||||    
T  32363299 attatcaacacctaaatcaatttaccgaccaacatcttcaaaac 32363342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 27405927 - 27406031
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||||||| || || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  27405927 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 27406025  T
Q  138 attatc 143  Q
    ||||||    
T  27406026 attatc 27406031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 30644814 - 30644913
Alignment:
Q  62 gaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttt 161  Q
    ||||||||||||||||  || || |||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||||| | | |||||||||||||    
T  30644814 gaaatggatcccaataccaatcaattcaacacccaaaattcttctaattacccatttagctaccaaaattccaacaattatcaacacccaaatcaatttt 30644913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 42804527 - 42804648
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||| || ||| || || |||||||||||||||| |||| ||||||| ||||||||| ||||||||||||    
T  42804527 tgaagttttagtctt-tatttagtgaaatggatctcactaacaatcaattcaacacccaaaattcttctgattacccttttaactaccaaaatcccaaca 42804625  T
Q  138 attatccaaatccaaatcaattt 160  Q
    |||||| | | ||||||||||||    
T  42804626 attatcaacacccaaatcaattt 42804648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 29616264 - 29616384
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| | ||||  |||| |||| |||||||||||||||||| | | |||||||||||    
T  29616264 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgactaccattttagctaccaaaatcccaacaattatcaacacccaaatcaatt 29616363  T
Q  160 tttcaaccaacgtcctcaaaa 180  Q
    |  |||||||| |||||||||    
T  29616364 tcccaaccaacatcctcaaaa 29616384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 169
Target Start/End: Original strand, 13479337 - 13479467
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || ||||||||||||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||| ||| |||    
T  13479337 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaacccctaca 13479435  T
Q  138 attatccaaatccaaatcaatttttcaaccaa 169  Q
    |||||| | | ||||||||||||  |||||||    
T  13479436 attatcaacagccaaatcaatttcccaaccaa 13479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 177473 - 177391
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaa 120  Q
    ||||||||||||||| ||||| || |||||||||||||||||||  ||||||||||||| |||| ||||||||| | ||||||    
T  177473 tgaagttttaatcttctttttggtaaaatggatcccaataataataatttcaacacccataattcttctaattatcaatttaa 177391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 15972918 - 15972845
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatta 111  Q
    ||||||||||| ||| ||||| |||||||||||  ||||||||| |||||||||||| | |||| |||||||||    
T  15972918 tgaagttttaaacttctttttagtgaaatggatttcaataataatcatttcaacacctagaattcttctaatta 15972845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 4219159 - 4219226
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| ||||    
T  4219159 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 4219226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 39008837 - 39008770
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| ||||    
T  39008837 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 39008770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 39238850 - 39238794
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||||||||||||||||| || |||||||||||||||| |||| ||||| ||||||    
T  39238850 aaatggatcccaataataatcaattcaacacccaaaattcttctgattactcattta 39238794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 40892100 - 40892029
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| ||||||||| ||||||    
T  40892100 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttaactaccaaaatc 40892029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 23089841 - 23089796
Alignment:
Q  61 tgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||    
T  23089841 tgaaatggatcccaataataatcaattcaacacccaaaattcttct 23089796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 36609791 - 36609751
Alignment:
Q  196 acctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  36609791 acctaattttggttttgcaccaaatttcaatcaatcatcct 36609751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 27945930 - 27945859
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  27945930 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 27945859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 32973150 - 32973221
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  32973150 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 32973221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 41152776 - 41152814
Alignment:
Q  198 ctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  41152776 ctaattttggttttacaccaaatttcaaccaatcatcct 41152814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 53181197 - 53181432
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53181197 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 53181296  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  53181297 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 53181396  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  53181397 attttggtttttcaccaaatttcaaccagtcatcct 53181432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21654568 - 21654792
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21654568 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaa 21654667  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  21654668 ttttctaattacccatataactacgaaaatcccaacaattatctaaatccaaatcaatttttcaaccaacgtcctcaaaacatacatcaaaacgtaccta 21654767  T
Q  201 attttggttttgcaccaaatttcaa 225  Q
    |||||| ||||||||||||||||||    
T  21654768 attttgattttgcaccaaatttcaa 21654792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 46914255 - 46914478
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  46914255 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 46914354  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||    
T  46914355 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaaca------------taccta 46914442  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46914443 attttggttttccaccaaatttcaaccagtcatcct 46914478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 2212061 - 2212284
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  2212061 cttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 2212160  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||    
T  2212161 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacc------------ta 2212248  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| |||||||||||||||| |||||||    
T  2212249 attttggttttccaccaaatttcaaccaatcatcct 2212284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 36658797 - 36658574
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  36658797 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcgcaataataaccatttcaacacccaaaat 36658698  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    | |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||            || |||    
T  36658697 tattctaattactcatttaactacgaaaatccaaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaaca------------taacta 36658610  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36658609 attttggttttacaccaaatttcaaccagtcatcct 36658574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 47749793 - 47749948
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||     
T  47749793 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtaaaatggatcccaataataactatttcaacacccaaaaa 47749892  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatca 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47749893 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatca 47749948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 19409833 - 19409682
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  19409833 atcttattattatctttctattagcaaactaagtgaagttttaattttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattatt 19409734  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatca 156  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19409733 ctaattactcatttaactacgaaaatcccaacaattatccaaatccaaatca 19409682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27141926 - 27142044
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  27141926 cttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 27142025  T
Q  101 ttttctaattacccattta 119  Q
    | |||||||||||||||||    
T  27142026 tattctaattacccattta 27142044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7401534 - 7401442
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacac 93  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7401534 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacac 7401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10090109 - 10090033
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaata 77  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10090109 cttcatcttattattatctttctattagcaaattaagtgaagttttaatcttattttttgtgaaatggatcccaata 10090033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 23539423 - 23539565
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  23539423 tgaagttttagtctt-tatttagtgaaatggatcccagtaacaatcaattcaacacccaaaattcttcttattacccatttaactaccaaaatcccaaca 23539521  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| ||||||||||    
T  23539522 attatcaacacccaaatcaatttcacaaccaacatcctcaaaac 23539565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 28901275 - 28901133
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||||||| || || |||||||||||||||| || | |||||||||||| |||| ||||||| ||||    
T  28901275 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaaattcttatgattacccatttagctaccaaaatccaaaca 28901177  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| ||||||||||    
T  28901176 attatcaacacccaaatcaatttcccaaccaacatcctcaaaac 28901133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 33607337 - 33607195
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||| ||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  33607337 tgaagttttagtctt-tgtttagtgaaatggatctcaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 33607239  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | | ||||||||||  |||||||| || |||||||    
T  33607238 attatcaacacctaaatcaatttcccaaccaacatcttcaaaac 33607195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 35809696 - 35809578
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 162  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||| |||||| |||| |||||||| ||||||||| | | ||||||||||||      
T  35809696 aaatggatcccaataataatcaattcaacacccaaaatttttctgattactcatttagctaccaaaatccctacaattatcaacagccaaatcaatttcc 35809597  T
Q  163 caaccaacgtcctcaaaac 181  Q
    |||||||| || |||||||    
T  35809596 caaccaacatcttcaaaac 35809578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 27864234 - 27864092
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || ||||||||||||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||||| |||    
T  27864234 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatccctaca 27864136  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  27864135 attatcaacagccaaatcaatttcccaaccaacatcttcaaaac 27864092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 16171657 - 16171778
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||| |||| |||| ||||| |||||||||||| | | |||||||||||    
T  16171657 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattacccttttagctaccaaaataccaacaattatcaacacccaaatcaatt 16171756  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  16171757 tcccaaccaacatcctcaaaac 16171778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 28447544 - 28447423
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| |||||| ||||| |||| |||| ||||||||||||| |   |||||||||||    
T  28447544 gtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattaccaatttagctaccaaaaccccaacaattatcaacgcccaaatcaatt 28447445  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  ||| |||| ||||||||||    
T  28447444 tcccaatcaacatcctcaaaac 28447423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 34463311 - 34463432
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| |||||||||||||||||| | | |||||||||||    
T  34463311 gtgaaatggatcccactaacaatcaattcaacacccaaaattattctgattaccattttagctaccaaaatcccaacaattatcaacacccaaatcaatt 34463410  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  34463411 tcccaaccaacatcctcaaaac 34463432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40596478 - 40596539
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40596478 cttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttttgtg 40596539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 53347430 - 53347575
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccat---ttcaacacccaaaatttttctaattacccatttaactacgaaaatccca 134  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||  ||   |||||||||||||||| |||| |||| |||||||||||| |||||||||    
T  53347430 tgaagttttagtctt-tatttagtgaaatggatcccaataataataatcaattcaacacccaaaattcttctgattatccatttaactaccaaaatccca 53347528  T
Q  135 acaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    ||||||||| | | | ||||||||||  |||||||| || |||||||    
T  53347529 acaattatcaacaccaaaatcaatttcccaaccaacatcttcaaaac 53347575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 13093929 - 13094047
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattttt 162  Q
    ||||||||||||||||||| || |||||||||||||||| || | ||||| |||||| |||| |||||||| ||||||||| | | ||||||||||||      
T  13093929 aaatggatcccaataataatcaattcaacacccaaaattcttttgattactcatttagctaccaaaatccctacaattatcaacagccaaatcaatttcc 13094028  T
Q  163 caaccaacgtcctcaaaac 181  Q
    |||||||| || |||||||    
T  13094029 caaccaacatcttcaaaac 13094047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 28901435 - 28901314
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||| ||| ||||||| || || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  28901435 tgaagttttagtctt-tatttagtgaaattgattccaataacaatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 28901337  T
Q  138 attatccaaatccaaatcaattt 160  Q
    |||||| | | ||||||||||||    
T  28901336 attatcaacacccaaatcaattt 28901314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 3530031 - 3530152
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||||||    
T  3530031 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatcaatt 3530130  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  3530131 tcccaaccaacatcctcaaaac 3530152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 8995053 - 8994932
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||||||    
T  8995053 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatcaatt 8994954  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  8994953 tcccaaccaacatcctcaaaac 8994932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 183
Target Start/End: Original strand, 33077632 - 33077755
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    |||||||||||| || ||| || || ||||||||| ||| ||||||| ||||| | |||| |||| |||||||||||||||||| | | |||||||||||    
T  33077632 gtgaaatggatcacactaacaatcaattcaacaccaaaattttttctgattacacttttagctaccaaaatcccaacaattatcaacacccaaatcaatt 33077731  T
Q  160 tttcaaccaacgtcctcaaaacat 183  Q
    |  |||||||| ||||||||||||    
T  33077732 tcccaaccaacatcctcaaaacat 33077755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 34434284 - 34434424
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||| ||||  ||||  |||||    
T  34434284 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattatccatttagctac-caaatttcaaca 34434381  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    |||||| | |  |||||||||||| |||||||| || ||||||    
T  34434382 attatcaacacacaaatcaattttccaaccaacatcttcaaaa 34434424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 13113831 - 13113710
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| || | ||||||  |||| |||| |||||||||||||||||| | |  ||||||||||    
T  13113831 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttatgattaccattttagctaccaaaatcccaacaattatcaacactcaaatcaatt 13113732  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  13113731 tcccaaccaacatcctcaaaac 13113710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 39048804 - 39048877
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatta 111  Q
    ||||||||||| ||| ||||| |||||||||||| ||||||||| |||||||||||||| |||| |||||||||    
T  39048804 tgaagttttaaacttctttttagtgaaatggatctcaataataatcatttcaacacccagaattcttctaatta 39048877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 31848516 - 31848568
Alignment:
Q  9 tattattatctttctattagcaaactaagtgaagttttaatcttattttttgt 61  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  31848516 tattattatctttcgattagcaaactaagtgaagttttaatcttatttgttgt 31848568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 34199031 - 34199114
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatc 143  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||||||||||||||    
T  34199031 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatcccaacaattatc 34199114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 56054552 - 56054437
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || ||||||||||||||||      |||||||||||| |||| ||||| |||||||||||  | | |||||||||||    
T  56054552 gtgaaatggatcccactaacaatcaattcaacacccaaaattc-----attacccatttagctaccaaaattccaacaattatgaacacccaaatcaatt 56054458  T
Q  160 tttcaaccaacgtcctcaaaa 180  Q
    |  |||||||| |||||||||    
T  56054457 tcccaaccaacatcctcaaaa 56054437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 33523705 - 33523627
Alignment:
Q  92 acccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaac 170  Q
    |||||||||| |||| |||||||||||| |||| |||||||||||||||||| | | | ||||||||||  ||||||||    
T  33523705 acccaaaattcttctgattacccatttagctaccaaaatcccaacaattatcaacacctaaatcaatttcccaaccaac 33523627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 48403668 - 48403724
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||||||||||||||||| || ||||||| |||||||| |||| ||||||||||||    
T  48403668 aaatggatcccaataataatcaattcaacatccaaaattcttctgattacccattta 48403724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 19273220 - 19273164
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||| ||||||||||||| || |||||||||||||||| |||| ||||| ||||||    
T  19273220 aaatgaatcccaataataatcaattcaacacccaaaattcttctgattactcattta 19273164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 3615011 - 3615082
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  3615011 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 3615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 18469117 - 18469196
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaat 139  Q
    ||||||||||||  |||||||| || ||||||||| |||||| |||| | |||| ||||| |||  ||||||||||||||    
T  18469117 gtgaaatggatctgaataataatcaattcaacaccaaaaattcttctgaataccaatttagctatcaaaatcccaacaat 18469196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 33607125 - 33607086
Alignment:
Q  197 cctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  33607125 cctaattttggttttgcatcaaatttcaatcagtcatcct 33607086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 17329647 - 17329719
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatta 111  Q
    |||||||||| |||| | ||| |||||||| |||| |||||||| || |||||||||||||||| |||| ||||    
T  17329647 tgaagttttagtctt-tgtttagtgaaatgaatccaaataataatcaattcaacacccaaaattcttctgatta 17329719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 4981990 - 4981931
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||    
T  4981990 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 4981931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 25787474 - 25787709
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25787474 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 25787573  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  25787574 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 25787673  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25787674 attttggtttttcaccaaatttcaaccagtcatcct 25787709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 25829431 - 25829666
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25829431 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 25829530  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  25829531 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 25829630  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25829631 attttggtttttcaccaaatttcaaccagtcatcct 25829666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 33751667 - 33751432
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33751667 cttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaa 33751568  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  33751567 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccatatcaatttttcaaccaacatcctcaaaacatacctcaaaacgtaccta 33751468  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||||||||||||||||||| |||||||    
T  33751467 attttggttttgcaccaaatttcaaccaatcatcct 33751432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 33936537 - 33936307
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33936537 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaattttc 33936438  T
Q  106 taattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaatttt 205  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  33936437 taattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacatcaaaacgtacctaatttt 33936338  T
Q  206 ggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||| ||||||||||||||||||||||||    
T  33936337 ggttttccaccaaatttcaaccagtcatcct 33936307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 42598129 - 42598364
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42598129 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 42598228  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  42598229 ttttctaattacccatataactacgaaaatcccaacatttatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 42598328  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42598329 attttggtttttcaccaaatttcaaccagtcatcct 42598364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 49822670 - 49822898
Alignment:
Q  8 ttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttcta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  49822670 ttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatctcaataataatcatttcaacacccaaaatttttcta 49822769  T
Q  108 attacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattttgg 207  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  49822770 attacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacatcaaaacgtacctaattttgg 49822869  T
Q  208 ttttgcaccaaatttcaaccagtcatcct 236  Q
    |||| ||||||||||||||||||||||||    
T  49822870 ttttccaccaaatttcaaccagtcatcct 49822898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 51435981 - 51435746
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  51435981 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatctcaacacccaaaaa 51435882  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  51435881 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 51435782  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  51435781 attttggtttttcaccaaatttcaaccagtcatcct 51435746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 50020353 - 50020118
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaa-cacccaaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||||| |||||||||    
T  50020353 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtaaaatg-atcccaataataatcatttcaaacacccaaaa 50020255  T
Q  100 tttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacct 199  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50020254 ttattctaattacccatttaactacgaaaattccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacct 50020155  T
Q  200 aattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  50020154 aattttgattttacaccaaatttcaaccagtcatcct 50020118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 42602225 - 42602002
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  42602225 cttcattttattattatctttatattagcaaactaagtgaagttttaatcttatttttagtgaaatagatcccaataataaccattttaacacccaaaat 42602126  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    | ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||||||    
T  42602125 tattctaattacccatttaactatgaaaatcctaacaattatccaaatccaaatcaatttttcaatcaacatcctcaaagcatacctcaaaacgtaccta 42602026  T
Q  201 attttggttttgcaccaaatttca 224  Q
    ||||||||||| ||||||||||||    
T  42602025 attttggttttacaccaaatttca 42602002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 17469771 - 17469585
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17469771 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 17469672  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17469671 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 17469585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 47147628 - 47147442
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  47147628 cttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 47147529  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47147528 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 47147442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 50034645 - 50034459
Alignment:
Q  1 cttcatcttattattatcttt-ctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaa 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  50034645 cttcatcttattattatcttttctattagcaaactaagtgaagttttaatcttatttttagttaaatggatcccaataataaccatttcaacacccaaaa 50034546  T
Q  100 tttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    || |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50034545 ttattctaactacccatttaactacgaaaatcccaacaa-tatccaaattcaaatcaatttttcaaccaacgtcctcaaaacatacct 50034459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 49086492 - 49086328
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49086492 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaat 49086393  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaa 165  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49086392 tattctaattatccatttaactacgaaaatcccaacaattatccaaattcaaatcaatttttcaa 49086328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 5844737 - 5844884
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  5844737 cttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 5844836  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaat 148  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  5844837 tattctaattacccatttaactacgaaaatcccaacaattatccaaat 5844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 30688624 - 30688759
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  30688624 atcttattattatttttctattagcaaactaagtgaagttttaatcttatttttaatgaaatggatcccaataataaccatttcaacacccaaaattatt 30688723  T
Q  105 ctaattacccatttaactacgaaaatcccaacaatt 140  Q
    |||||||||||||||||||||||||| |||||||||    
T  30688724 ctaattacccatttaactacgaaaattccaacaatt 30688759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 21228435 - 21228291
Alignment:
Q  43 ttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattat 142  Q
    |||||||||| ||||| ||||||||||||||||||||||   |||||||||||| |||| |||||||||| |||||| |||| |||||||||||||||||    
T  21228435 ttttaatcttctttttagtgaaatggatcccaataataattttttcaacacccataattcttctaattacgcatttagctaccaaaatcccaacaattat 21228336  T
Q  143 ccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    | ||||||||||||||||| |||||||||||||||||||||||||    
T  21228335 caaaatccaaatcaattttccaaccaacgtcctcaaaacatacct 21228291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 51974558 - 51974373
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||||| || ||||  ||||||||||||| |||||||| |||||||||||||| |||| || |||||||||||||| |||| |||||| |||||    
T  51974558 tgaagttttaatattcttttcagtgaaatggatcc-aataataatcatttcaacacccagaattcttttaattacccatttagctaccaaaatctcaaca 51974460  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||||            ||||||||||| |||||||||||||||||||||||||||||    
T  51974459 attatcaaaatccagatcaattttccaaccaacgtcctcaaaacat------------acctaattttgattttgcaccaaatttcaaccagtcatcct 51974373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 21229361 - 21229509
Alignment:
Q  39 gaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaa 138  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||  |||||| ||||||    
T  21229361 gaagttttaatcttctttttagtgaaatgaatcccaataataatcctttcaacacccaaaattcttctaattacccatttagctatcaaaatcgcaacaa 21229460  T
Q  139 ttatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    ||||  ||||| ||||||||||| |||||||| ||||||||||||||||    
T  21229461 ttataaaaatcgaaatcaattttccaaccaacttcctcaaaacatacct 21229509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25450199 - 25450296
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25450199 cttcttcttattattatcttcctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 25450296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 49357010 - 49357091
Alignment:
Q  3 tcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataacca 84  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49357010 tcatcttattattatctttctattcgcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataacca 49357091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 33187852 - 33187994
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||||||| || || |||||||||||||||| |||| | ||||||| || |||| ||||||||||||    
T  33187852 tgaagttttagtctt-tatttagtgaaatggatcccaataaaaatcaattcaacacccaaaattcttctgactacccatctagctaccaaaatcccaaca 33187950  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | |||||||||||||||||||||| ||||||||||    
T  33187951 attatcaacacccaaatcaatttttcaaccaacatcctcaaaac 33187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 49027159 - 49027301
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||| |||||||| || ||||||||||||||||||||| |||| ||||||| |||| ||||||||||||    
T  49027159 tgaagttttagtctt-tgtttagtgaaatggatcctaataataatcaattcaacacccaaaatttttctgattatccatttagctaccaaaatcccaaca 49027257  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||| |||||||| || |||||||    
T  49027258 attatcaacacccaaatcaattttccaaccaacatcttcaaaac 49027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 37410205 - 37410279
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataata 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37410205 tcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataata 37410279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 12975159 - 12975028
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  12975159 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 12975061  T
Q  138 attatccaaatccaaatcaatttttcaaccaac 170  Q
    |||||| | | | ||||||||||| ||||||||    
T  12975060 attatcaacacctaaatcaattttccaaccaac 12975028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 20139876 - 20139745
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||  | |||||||||||||||| |||| |||||||||||| |||| |||||| |||||    
T  20139876 tgaagttttagtctt-tatttagtgaaatggatcccaataataattaattcaacacccaaaattcttctgattacccatttagctaccaaaatcgcaaca 20139778  T
Q  138 attatccaaatccaaatcaatttttcaaccaac 170  Q
    |||||| | | ||||||||||||  ||||||||    
T  20139777 attatcaacacccaaatcaatttcccaaccaac 20139745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 26162279 - 26162421
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || |||||| |||||| |||| |||||||||||  |||  ||||||||||||    
T  26162279 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacaccaaaaattcttctgattacccatttggctatcaaaatcccaaca 26162377  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||| |||||||| || |||||||    
T  26162378 attatcaacacccaaatcaattttccaaccaacatcttcaaaac 26162421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 43475745 - 43475603
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||| |||||| ||| || || |||||||| ||||||| |||| |||||||||||| |||| ||||||||||||    
T  43475745 tgaagttttagtctt-tatttagtgaaatgaatcccactaacaatcaattcaacactcaaaattcttctgattacccatttagctaccaaaatcccaaca 43475647  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| ||||||||||    
T  43475646 attatcaacacccaaatcaatttcacaaccaacatcctcaaaac 43475603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 51304888 - 51304746
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || ||||||||||||||||||| || |||||||||||||||| |||| ||||| |||||| |||| |||||||| |||    
T  51304888 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattactcatttagctaccaaaatccctaca 51304790  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  51304789 attatcaacaaccaaatcaatttcccaaccaacatcttcaaaac 51304746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 10424428 - 10424549
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || ||| |||||||||||| |||| ||||||  |||| |||| |||||||||||||||||| | | |||||||||||    
T  10424428 gtgaaatggatcccactaacaatcaattccacacccaaaattcttctgattaccattttagctaccaaaatcccaacaattatcaacacccaaatcaatt 10424527  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    | ||||||||| ||||||||||    
T  10424528 tctcaaccaacatcctcaaaac 10424549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 42564244 - 42564123
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| |||||||||||||||||| | | |||||||||||    
T  42564244 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatcccaacaattatcaacacccaaatcaatt 42564145  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  42564144 tcccaaccaacatcctcaaaac 42564123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 48886572 - 48886676
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||| |||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  48886572 tgaagttttagtctt-tgtttagtgaaatggattccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 48886670  T
Q  138 attatc 143  Q
    ||||||    
T  48886671 attatc 48886676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 36178222 - 36178364
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || ||||||||| ||||||||| || ||||||||| |||||| |||| ||||  |||||| |||| ||||||||||||    
T  36178222 tgaagttttagtctt-tgtttagtaaaatggatctcaataataatcaattcaacacctaaaattcttctgattattcatttagctaccaaaatcccaaca 36178320  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||| |||||||| || |||||||    
T  36178321 attatcaacagccaaatcaattttccaaccaacatcttcaaaac 36178364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 6045104 - 6045225
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||||||    
T  6045104 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatcaatt 6045203  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  6045204 tcccaaccaacatcctcaaaac 6045225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 15493530 - 15493590
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    ||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||||||||    
T  15493530 tgaagttttaatcttctttttagtgaaatagattccaataataatcatttcaacacccaaa 15493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 31170006 - 31170087
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaa 120  Q
    |||||||||| |||| | ||| |||||||| ||||||||||||| || ||||||| |||||||| |||| |||||||||||||    
T  31170006 tgaagttttagtctt-tgtttagtgaaatgaatcccaataataatcaattcaacagccaaaattcttctgattacccatttaa 31170087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 4873913 - 4874033
Alignment:
Q  61 tgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaattt 160  Q
    |||||| ||||||||||| || || ||||| ||||||| || |||  ||||||||| || |||| ||||||| ||  |||||| | | ||||||||||||    
T  4873913 tgaaattgatcccaataacaatcaattcaatacccaaagttcttcagattacccatctagctaccaaaatccaaattattatcaacacccaaatcaattt 4874012  T
Q  161 ttcaaccaacgtcctcaaaac 181  Q
     ||||||||| |||| |||||    
T  4874013 ctcaaccaacatccttaaaac 4874033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 47700694 - 47700749
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacac 93  Q
    ||||||||||| ||| ||||| ||||||||||| |||||||||| |||||||||||    
T  47700694 tgaagttttaaacttctttttagtgaaatggattccaataataatcatttcaacac 47700749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 17469589 - 17469548
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  17469589 tacctaattttggttttccaccaaatttcaaccaatcatcct 17469548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 21228295 - 21228254
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  21228295 tacctaattttggttttgcaccaaatttcaactagccatcct 21228254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 47147446 - 47147405
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  47147446 tacctaattttggttttccaccaaatttcaaccaatcatcct 47147405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 50034463 - 50034422
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  50034463 tacctaattttgattttacaccaaatttcaaccagtcatcct 50034422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 11908366 - 11908299
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || ||||||||||| |||| ||||    
T  11908366 tgaagttttagtctt-tctttagtgaaatggatcccaataataatcaattcaacacccataattcttct 11908299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 21229505 - 21229536
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaac 226  Q
    ||||||||||||||||||||||||||||||||    
T  21229505 tacctaattttggttttgcaccaaatttcaac 21229536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 30415223 - 30415294
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  30415223 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 30415294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 30688755 - 30688785
Alignment:
Q  155 caatttttcaaccaacgtcctcaaaacatac 185  Q
    |||||||||||||||||||||||||||||||    
T  30688755 caatttttcaaccaacgtcctcaaaacatac 30688785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 233
Target Start/End: Original strand, 30688787 - 30688821
Alignment:
Q  199 taattttggttttgcaccaaatttcaaccagtcat 233  Q
    ||||||||||||| |||||||||||||||||||||    
T  30688787 taattttggttttacaccaaatttcaaccagtcat 30688821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 35472057 - 35472118
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||    
T  35472057 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaat 35472118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 49027331 - 49027373
Alignment:
Q  145 aaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||    
T  49027331 aaatccaaatcaattttccaatcaacatcctcaaaacatacct 49027373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 6832921 - 6832880
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatt 101  Q
    ||||||||||| |||||||||| || ||||||||||||||||    
T  6832921 gtgaaatggattccaataataatcaattcaacacccaaaatt 6832880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 51999809 - 51999868
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || ||||| |||||||    
T  51999809 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaatacccaaa 51999868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 12858246 - 12858011
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12858246 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 12858147  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  12858146 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 12858047  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  12858046 attttggtttttcaccaaatttcaaccagtcatcct 12858011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 30819383 - 30819618
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30819383 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 30819482  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  30819483 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 30819582  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  30819583 attttggtttttcaccaaatttcaaccagtcatcct 30819618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 9072686 - 9072921
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9072686 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttgttgtgaaatggatcccaataataaccatttcaacacccaaaat 9072785  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  9072786 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 9072885  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9072886 attttggtttttcaccaaatttcaaccagtcatcct 9072921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 31185007 - 31185238
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  31185007 atcttattattatctttctattagaaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattatt 31185106  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattt 204  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||    
T  31185107 ctaattacccatttaactaataaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacttacctcaaaacatacataattt 31185206  T
Q  205 tggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||| ||||||||||||||||||||||||    
T  31185207 tggttttacaccaaatttcaaccagtcatcct 31185238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 39432483 - 39432699
Alignment:
Q  8 ttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttcta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39432483 ttattattatctttctattagcaaactaagtgaagttttaatcttactttttgtaaaatggatcccaataataaccatttcaacacccaaaatttttcta 39432582  T
Q  108 attacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattttgg 207  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||    
T  39432583 attacccctttaactacgaaaatcgcaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaaca------------tacctaattttgg 39432670  T
Q  208 ttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||||||||||||||||||||    
T  39432671 ttttgcaccaaatttcaaccagtcatcct 39432699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 8855354 - 8855168
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  8855354 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 8855255  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8855254 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 8855168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 36855121 - 36855343
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  36855121 cttcatcttattattatctttctattagcaaactaagtga-gttttaatcttatttttagtgaaatggatcccaatagtaatcatttcaacacccaaaat 36855219  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||            |||||||    
T  36855220 ttttctaattacccatttaattacgaaaatcccaacaattatccaaatccaattcaatttttcaaccaacgtcctcaaaac------------gtaccta 36855307  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36855308 attttggttttacaccaaatttcaaccagtcatcct 36855343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 37246009 - 37245831
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37246009 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaat 37245910  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaa 179  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37245909 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatgaatttttcaaccaacgtcctcaaa 37245831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 5 - 239
Target Start/End: Original strand, 31204733 - 31204955
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||    
T  31204733 atcttattattatctttctattagtaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaccaaaaattatt 31204832  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattt 204  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||             ||| ||||||    
T  31204833 ctaattacccatttaactacgaaaatcccaacaattatcctcatccaaatcaatttttcaaccaacgtcctcaaaac------------ttacataattt 31204920  T
Q  205 tggttttgcaccaaatttcaaccagtcatcctatg 239  Q
    ||||||| |||||||||||||||||||||||||||    
T  31204921 tggttttacaccaaatttcaaccagtcatcctatg 31204955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 2778868 - 2779051
Alignment:
Q  4 catcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttt 103  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| |    
T  2778868 catcttattattatttttctattaccaaactaagtgaagttttaatcttatttttagtgaaatggatctcaataataatcatttcaacacccaaaattat 2778967  T
Q  104 tctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  2778968 tctaattatccatttaactacgaaaatcccaacaattatccaaatcgaaatcaatttttcaaccaacgtcttcaaaacatacct 2779051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 926570 - 926789
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||| |||||||||||||||||| ||    
T  926570 atcttattattatctttctattagcaaactaagtgaagttttaatattatttttagtgaaatgaatctcaataataacaatttcaacacccaaaattatt 926669  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattt 204  Q
    |||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||    
T  926670 ctaatttctcatttaactgcgaaaatctcaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacc------------taattt 926757  T
Q  205 tggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||| |||||||||||||| |||||||||    
T  926758 tggttttacaccaaatttcaacgagtcatcct 926789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 4296368 - 4296486
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  4296368 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 4296467  T
Q  101 ttttctaattacccattta 119  Q
    | |||||||||||||||||    
T  4296468 tattctaattacccattta 4296486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 6363719 - 6363577
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| || ||||||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  6363719 tgaagttttagtctt-tatttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 6363621  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | |  |||||||||||| ||||| || ||||||||||    
T  6363620 attatcaacacgcaaatcaattttccaaccgacatcctcaaaac 6363577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 7762923 - 7763065
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| |||||  |||||    
T  7762923 tgaagttttagtctt-tgtttcgtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatttcaaca 7763021  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  7763022 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 7763065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 5145139 - 5145260
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||| |||| ||||||||| || ||||||||||||||||||| |||||||| ||||| |||| ||||||| |||||||||| | | |||||||||||    
T  5145139 gtgaaatagatctcaataataatcaattcaacacccaaaatttttttaattacctatttagctaccaaaatccaaacaattatcaacacccaaatcaatt 5145238  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    || |||||||| || |||||||    
T  5145239 ttccaaccaacatcttcaaaac 5145260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 4279401 - 4279281
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||| || ||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||| |||||| | | |||||||||||    
T  4279401 gtgaaatggctcacaataataatcaattcaacacccaaaattattctgattacccatttagctaccaaaatcccaaccattatcaacacccaaatcaatt 4279302  T
Q  160 tttcaaccaacgtcctcaaaa 180  Q
    |  |||||||| | |||||||    
T  4279301 tcccaaccaacatactcaaaa 4279281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 17928948 - 17929079
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||| |||| |||||| |||||    
T  17928948 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattatccatttagctaccaaaatctcaaca 17929046  T
Q  138 attatccaaatccaaatcaatttttcaaccaac 170  Q
    |||||| | |  |||||||||||  ||||||||    
T  17929047 attatcaacacacaaatcaatttcccaaccaac 17929079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 22349674 - 22349795
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||||||    
T  22349674 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatcaatt 22349773  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  22349774 tcccaaccaacatcctcaaaac 22349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 36209203 - 36209307
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| |||| ||||||| |||   |||||||||||    
T  36209203 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattatccatttagctaactaaatcccaaca 36209301  T
Q  138 attatc 143  Q
    ||||||    
T  36209302 attatc 36209307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 16218480 - 16218552
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatt 110  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||| | |||||||||||| |||| ||||||||    
T  16218480 tgaagttttaatcttctttttagtgaattggatcccaataataatcctttcaacacccataattcttctaatt 16218552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 39490409 - 39490326
Alignment:
Q  86 ttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaa 169  Q
    |||||||||||||||| |||| ||||| |||||| |||| |||||||||||||||||| | |  |||||||||||  |||||||    
T  39490409 ttcaacacccaaaattcttctgattactcatttagctaccaaaatcccaacaattatcaacactcaaatcaatttcccaaccaa 39490326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1987497 - 1987459
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtg 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1987497 cttcatcttattattatctttctattagcaaactaagtg 1987459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 17486171 - 17486104
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| ||||    
T  17486171 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 17486104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 8855172 - 8855131
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  8855172 tacctaattttggttttccaccaaatttcaaccaatcatcct 8855131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 1308422 - 1308489
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| |||||||| ||||||||||||| || |||||||||||||||| ||||    
T  1308422 tgaagttttagtctt-tgtttagtgaaatgtatcccaataataatcaattcaacacccaaaattcttct 1308489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 7585296 - 7585367
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  7585296 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 7585367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 14009666 - 14009592
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaa 138  Q
    ||||||||||||| ||||| ||||| ||||||||||||| | ||||||| || || ||||||  ||||||||||||    
T  14009666 aaatggatcccaacaataaacattttaacacccaaaattctactaatta-cctttcaactacccaaatcccaacaa 14009592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 2779047 - 2779088
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||||||||| |||| ||||||||||||||||| ||||||    
T  2779047 tacctaattttgattttacaccaaatttcaaccagccatcct 2779088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 45242407 - 45242172
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45242407 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 45242308  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  45242307 ttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 45242208  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45242207 attttggtttttcaccaaatttcaaccagtcatcct 45242172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 52930409 - 52930632
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  52930409 cttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattttttgtgaaatgtatcccaataataaccatttcaacacccaaaat 52930508  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  52930509 ttttctaattatccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaac------------gtaccta 52930596  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  52930597 attttggttttgcaccaaatttcaaccagtcatcct 52930632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 17786600 - 17786377
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17786600 cttcatcttattattatctttctattagcaaattaagtgaaattttaatcttattttttgtgaaatggatccaaataataaccatttcaacacccaaaat 17786501  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            |||||||    
T  17786500 ttttttaattacccatttaactatgaaaatcccaacaattatccaaatgcaaatcaatttttcaaccaacgtcctcaaaac------------gtaccta 17786413  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||| |||||||||||||||||||||||||||||    
T  17786412 attttgattttgcaccaaatttcaaccagtcatcct 17786377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 31471543 - 31471357
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  31471543 cttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 31471444  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31471443 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 31471357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 37419941 - 37420088
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  37419941 cttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 37420040  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaat 148  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  37420041 tattctaattacccatttaactacgaaaatcccaacaattatccaaat 37420088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 27630057 - 27630204
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||    
T  27630057 cttcttcttattattatctttctattagcaaactaagtgaaattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaacaaaat 27630156  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaat 148  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  27630157 tattctaattacctatttaactacgaaaatcccaacaattatccaaat 27630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37646153 - 37646271
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  37646153 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 37646252  T
Q  101 ttttctaattacccattta 119  Q
    | |||||||||||||||||    
T  37646253 tattctaattacccattta 37646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 8464917 - 8464822
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  8464917 atcttattattatctttctattagcaaactaagtgaagttttaatcttttttttagtgaaatggatcccaataataaccatttcaagacccaaaat 8464822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 183
Target Start/End: Original strand, 18317587 - 18317716
Alignment:
Q  54 ttttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaa 153  Q
    ||||| |||||||||||||||||||||| ||||| |||||||| |||| |||| |||||||||||| |||| |||||||||||||||||| | |||||||    
T  18317587 tttttagtgaaatggatcccaataataatcatttaaacacccagaattcttctgattacccatttagctaccaaaatcccaacaattatcaacatccaaa 18317686  T
Q  154 tcaatttttcaaccaacgtcctcaaaacat 183  Q
    |||||||  |||||||| ||||||||||||    
T  18317687 tcaatttcccaaccaacatcctcaaaacat 18317716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 51523596 - 51523454
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || ||||||||||||||||||| | |||||||||||| |||| ||||||||||||    
T  51523596 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacacccaaaatttttatgattacccatttagctaccaaaatcccaaca 51523498  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| ||||||||||    
T  51523497 attatcaatacccaaatcaatttcccaaccaacatcctcaaaac 51523454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44450982 - 44451088
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||  | ||||||    
T  44450982 cttcttcttattattatctttctattagcaaactaagtgaagttttaagcttatttttagtgaaatggatcccaataacaaccatttcaatcctcaaaat 44451081  T
Q  101 ttttcta 107  Q
    | |||||    
T  44451082 tattcta 44451088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44651430 - 44651324
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||  | ||||||    
T  44651430 cttcttcttattattatctttctattagcaaactaagtgaagttttaagcttatttttagtgaaatggatcccaataacaaccatttcaatcctcaaaat 44651331  T
Q  101 ttttcta 107  Q
    | |||||    
T  44651330 tattcta 44651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 29524230 - 29524089
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    ||||||||||||||| | ||| |||||||| ||||||||||||| || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  29524230 tgaagttttaatctt-tgtttagtgaaatgtatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 29524132  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    |||||| | | ||||||||||||  |||||||| || ||||||    
T  29524131 attatcaacacccaaatcaatttcccaaccaacatcttcaaaa 29524089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 45363808 - 45363667
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||  | |||||||||||||||| |||  |||||||||||| |||| ||||||||||||    
T  45363808 tgaagttttagtctt-tgtttagtgaaatggatcccaataataataaattcaacacccaaaattcttcagattacccatttagctaccaaaatcccaaca 45363710  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    |||||| | | ||||||||||||  |||||||| |||||||||    
T  45363709 attatcaacacccaaatcaatttcccaaccaacatcctcaaaa 45363667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 17676095 - 17676235
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||| ||||| || || |||||||||||||||| |||| |||||||||||| |||| ||||||||||||    
T  17676095 tgaagttttagtctt-tatttagtgaaatggatcc-aataacaatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 17676192  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    |||||| | | ||||||||||||  |||||||| |||||||||    
T  17676193 attatcaacacccaaatcaatttcacaaccaacatcctcaaaa 17676235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 47297353 - 47297474
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    |||||||||||| |||||| || || |||||||||||||||| |||| ||||| |||||  |||| |||||||||||||||||| | |  ||||||||||    
T  47297353 gtgaaatggatctcaataacaatcaattcaacacccaaaattcttctgattactcatttggctaccaaaatcccaacaattatcaacactcaaatcaatt 47297452  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    | ||||||||| ||||||||||    
T  47297453 tctcaaccaacatcctcaaaac 47297474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 8471542 - 8471413
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||| ||||| || || |||||||||||||||| ||||||||||||||||| |||| |||| ||||| |    
T  8471542 tgaagttttagtctt-tatttagtgaaatggatcc-aataacaatcaattcaacacccaaaattcttctaattacccatttagctaccaaaaccccaata 8471445  T
Q  138 attatccaaatccaaatcaatttttcaaccaa 169  Q
    |||||| | | ||||||||||||| |||||||    
T  8471444 attatcaacacccaaatcaattttccaaccaa 8471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 33167545 - 33167401
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccat---ttcaacacccaaaatttttctaattacccatttaactacgaaaatccca 134  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||  ||   |||||||||||||||| || | |||||||||||| ||||  ||||||||    
T  33167545 tgaagttttagtctt-tgtttagtgaaatggatcccaataataataatcaattcaacacccaaaattcttttgattacccatttagctaccgaaatccca 33167447  T
Q  135 acaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    ||||||||| | | ||||||||||||| |||| ||| |||||||||    
T  33167446 acaattatcaacacccaaatcaattttccaacaaacatcctcaaaa 33167401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 51156425 - 51156567
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||| ||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  51156425 tgaagttttagtctt-tgtttagtgaaatggatctcaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 51156523  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  51156524 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 51156567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 48407642 - 48407548
Alignment:
Q  86 ttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||| | | ||||||||||||  |||||||| |||||||||    
T  48407642 ttcaacacccaaaaattttctgattacccttttaactaccaaaatcccaacaattatcaacacccaaatcaatttcccaaccaacatcctcaaaa 48407548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 36231244 - 36231141
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||||||| ||| | |||||||||||||||| ||| ||||||||||||| |||| ||||||||||||    
T  36231244 tgaagttttagtctt-tatttagtgaaatggatcccaataacaac-agttcaacacccaaaattcttcaaattacccatttagctaccaaaatcccaaca 36231147  T
Q  138 attatc 143  Q
    ||||||    
T  36231146 attatc 36231141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 48384951 - 48385072
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||||| | | |||||||||||    
T  48384951 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattaccattttagctaccaaaatccaaacaattatcaacacccaaatcaatt 48385050  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| ||||||||||    
T  48385051 tcccaaccaacatcctcaaaac 48385072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 31159731 - 31159611
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||  |||| |  |||| |||| |||||||||||||||||| | | |||||||||||    
T  31159731 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttccgattatcattttagctaccaaaatcccaacaattatcaacacccaaatcaatt 31159632  T
Q  160 tttcaaccaacgtcctcaaaa 180  Q
    || |||||||| |||||||||    
T  31159631 ttccaaccaacatcctcaaaa 31159611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 48927201 - 48927129
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatt 110  Q
    |||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  48927201 tgaagttttaatattctttttagtgaaatggatcccaataataatcatttcaacacccaaaattcttctaatt 48927129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 643565 - 643617
Alignment:
Q  9 tattattatctttctattagcaaactaagtgaagttttaatcttattttttgt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  643565 tattattatctttctattagcaaactaagtgaagttttaatcttatttgttgt 643617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 36303414 - 36303341
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatta 111  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||| | | |||| |||||||||    
T  36303414 tgaagttttaaacttctttttagtgaaatggatcccaataataatcatttcaacatctagaattcttctaatta 36303341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 48729754 - 48729681
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatta 111  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||| | | |||| |||||||||    
T  48729754 tgaagttttaaacttctttttagtgaaatggatcccaataataatcatttcaacatctagaattcttctaatta 48729681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 45455646 - 45455722
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattaccca 115  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| || | ||||||||    
T  45455646 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttttgattaccca 45455722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 20584539 - 20584579
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttt 45  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  20584539 atcttattattatttttctattagcaaactaagtgaagttt 20584579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 31471361 - 31471320
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  31471361 tacctaattttggttttccaccaaatttcaaccaatcatcct 31471320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 38212676 - 38212635
Alignment:
Q  40 aagttttaatcttattttttgtgaaatggatcccaataataa 81  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  38212676 aagttttaatcttattttaagtgaaatggatcccaataataa 38212635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 2474886 - 2474957
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  2474886 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 2474957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 13817406 - 13817171
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13817406 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 13817307  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  13817306 ttttctaattatccatataactatgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacatcaaaacgtaccta 13817207  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||| | ||| ||||||||||||||||||||||||    
T  13817206 attttaggtttccaccaaatttcaaccagtcatcct 13817171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 5736379 - 5736149
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttc 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||| |||    
T  5736379 tcttattattatctttctattaggaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataacaaccatttcaatccccaaaattattc 5736280  T
Q  106 taattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaatttt 205  Q
    || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5736279 tagttacccatttaactacgaaaattccaacaattatcccaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaacgtacctaatttt 5736180  T
Q  206 ggttttgcaccaaatttcaaccagtcatcct 236  Q
    |||||| ||||||||||||||||||||||||    
T  5736179 ggttttacaccaaatttcaaccagtcatcct 5736149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 5214152 - 5213917
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||     
T  5214152 cttcatcttattattatctttctattagcaaattaagtgaagttttaatcttattttttgtgaaatcgatcccaataataaccatctcaacacccaaaaa 5214053  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
      || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||||||    
T  5214052 aattttaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaattttataaccaacgtcctcaaaacatacatcaaaacgtaccta 5213953  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5213952 attttggttttccaccaaatttcaaccagtcatcct 5213917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 26748676 - 26748899
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  26748676 cttcatcttattattatatttctattagcaaactaagtgaagttttaatcttattttttgtgacatggatcccaataataaccatttcaacacccaaatt 26748775  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtaccta 200  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||    
T  26748776 ttttctaattacccatttaactttgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaac------------gtaccta 26748863  T
Q  201 attttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  26748864 attttggttttgcaccaaatttcaaccagtcatcct 26748899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 8449751 - 8449937
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  8449751 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 8449850  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8449851 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 8449937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 35101752 - 35101566
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  35101752 cttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 35101653  T
Q  101 ttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35101652 tattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 35101566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 6 - 179
Target Start/End: Complemental strand, 36912918 - 36912745
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  36912918 tcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattc 36912819  T
Q  106 taattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36912818 taattacccatttaactacgaaaatcccaacaattatccaaatccaaatgaatttttcaaccaacgtcctcaaa 36912745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 17744929 - 17744707
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||| ||    
T  17744929 atcttattattatctttctattagcaaactaagtgaagttttaatctaatttttattgaaattgatcccaataataaccatttcaacacccaaaattatt 17744830  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattt 204  Q
    ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||            |||||||||    
T  17744829 ctaataattcatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaatatcctcaaaacat------------acctaattt 17744742  T
Q  205 tggttttgcaccaaatttcaaccagtcatcctatg 239  Q
    ||||||| |||||||||||||| ||||||||||||    
T  17744741 tggttttacaccaaatttcaacaagtcatcctatg 17744707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 27392772 - 27392608
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  27392772 gtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactaccaaaatcccaacaattatcaaaatccaaatcaatt 27392673  T
Q  160 tttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    || |||||||||||||||||||||            |||||||||||||||| ||||||||||||||||||||||||    
T  27392672 ttccaaccaacgtcctcaaaacat------------acctaattttggttttacaccaaatttcaaccagtcatcct 27392608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 6 - 153
Target Start/End: Original strand, 34955055 - 34955202
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||  | ||||||| |||    
T  34955055 tcttattattatctttctattagcaaactaagtgaagttttaatgttatttttagtgaaatggatcccaataacaaccatttcaatcctcaaaattattc 34955154  T
Q  106 taattacccatttaactacgaaaatcccaacaattatccaaatccaaa 153  Q
    || |||||||||||||||||||||||||||||||||||||||||||||    
T  34955155 tagttacccatttaactacgaaaatcccaacaattatccaaatccaaa 34955202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 43617945 - 43618063
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaat 100  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  43617945 cttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaat 43618044  T
Q  101 ttttctaattacccattta 119  Q
    | |||||||||||||||||    
T  43618045 tattctaattacccattta 43618063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 18029068 - 18029160
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  18029068 tcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatctcaataataaccatttcaacacccaaa 18029160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26414558 - 26414466
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||||||||    
T  26414558 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttcaacgaaatggatcccaataattaccatttcaacac 26414466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 4625244 - 4625319
Alignment:
Q  6 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataa 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4625244 tcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataa 4625319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 15056881 - 15056760
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||||||||||| ||| || || |||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||| | | |||||||||||    
T  15056881 gtgaaatggatcccactaacaatcaattcaacacccaaaattcttctgattacccttttaactaccaaaatcccaacaattatcaacacccaaatcaatt 15056782  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    || |||||||| ||||||||||    
T  15056781 ttccaaccaacatcctcaaaac 15056760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 13947791 - 13947649
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || ||||||||| |||||| |||| |||||||||||| |||| ||||||||||||    
T  13947791 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacaccaaaaattcttctgattacccatttagctaccaaaatcccaaca 13947693  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  13947692 attatcaacaaccaaatcaatttcccaaccaacatcttcaaaac 13947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 13783953 - 13784074
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    |||||||||||||||||||||| || ||||||||| |||||| |||| ||||| |||||| |||| |||||||||||||||||| | | |||||||||||    
T  13783953 gtgaaatggatcccaataataatcaattcaacacctaaaattcttctgattactcatttagctaccaaaatcccaacaattatcaacacccaaatcaatt 13784052  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| || |||||||    
T  13784053 tcccaaccaacatcttcaaaac 13784074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 43524012 - 43524133
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatt 159  Q
    ||||||| |||||||||||||| || |||||||||||||||| |||| |||| ||||||| |||| |||||||||||||||||| | | |||||||||||    
T  43524012 gtgaaatagatcccaataataatcaattcaacacccaaaattcttctgattatccatttacctaccaaaatcccaacaattatcaacacccaaatcaatt 43524111  T
Q  160 tttcaaccaacgtcctcaaaac 181  Q
    |  |||||||| || |||||||    
T  43524112 tcccaaccaacatcttcaaaac 43524133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26631869 - 26631930
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26631869 cttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttttgtg 26631930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30470535 - 30470596
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtg 62  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30470535 cttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttttgtg 30470596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42861051 - 42860991
Alignment:
Q  1 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgt 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42861051 cttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttgttgt 42860991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 1633159 - 1633301
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||| ||||| || || ||||||||||||| |||| |||| ||||||| |||  ||||||||||||    
T  1633159 tgaagttttagtctt-tgtttagtgaaatggatcccaacaataatcaatttaacacccaaaattcttctgattatccatttagctatcaaaatcccaaca 1633257  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  1633258 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 1633301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 30529410 - 30529493
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattatc 143  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| |||||| ||||| |||| ||||||||||||||||||    
T  30529410 gtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacctatttagctaccaaaatcccaacaattatc 30529493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 38204971 - 38205102
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||| |||||||| || |||| || |||||||| || | |||| ||||||| |||| ||||||||||||    
T  38204971 tgaagttttagtctt-tatttagtgaaatggatcctaataataatcaattcaccatccaaaattcttttgattatccatttagctaccaaaatcccaaca 38205069  T
Q  138 attatccaaatccaaatcaatttttcaaccaac 170  Q
    |||||| | | |||||||||||| |||||||||    
T  38205070 attatcaacacccaaatcaatttctcaaccaac 38205102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 29732011 - 29731938
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattac 112  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| ||||||||||    
T  29732011 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctaattac 29731938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 26244933 - 26244877
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||||||||||||||||| || |||||||||||||||| |||| ||||| ||||||    
T  26244933 aaatggatcccaataataatcaattcaacacccaaaattcttctgattactcattta 26244877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 231674 - 231593
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||| |||||||||| | | |||| ||||||| | |||||||    
T  231674 tgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaacatctagaattcttctaatcaaccattta 231593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 708085 - 708004
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||| |||||||||| | | |||| ||||||| | |||||||    
T  708085 tgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaacatctagaattcttctaatcaaccattta 708004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 745297 - 745216
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||| |||||||||| | | |||| ||||||| | |||||||    
T  745297 tgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaacatctagaattcttctaatcaaccattta 745216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 869192 - 869111
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||| |||||||||| | | |||| ||||||| | |||||||    
T  869192 tgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaacatctagaattcttctaatcaaccattta 869111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 17494325 - 17494409
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaa 90  Q
    |||||||||||||| ||||||||||   ||   ||||||||||| ||| ||||| |||||||| ||||||||||||| ||||||||    
T  17494325 atcttattattatccttctattagctttcttt-tgaagttttaaacttctttttagtgaaatgaatcccaataataatcatttcaa 17494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 35101570 - 35101529
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  35101570 tacctaattttggttttccaccaaatttcaaccaatcatcct 35101529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 44503591 - 44503519
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaatta 111  Q
    |||||||||||| || | ||| |||||||||||| ||||||||| || |||||||||||||||| |||| ||||    
T  44503591 tgaagttttaatatt-tgtttagtgaaatggatctcaataataatcaattcaacacccaaaattcttctgatta 44503519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 40283911 - 40283855
Alignment:
Q  63 aaatggatcccaataataaccatttcaacacccaaaatttttctaattacccattta 119  Q
    |||||||||||||||||||  | |||||||||||||||| |||| ||||| ||||||    
T  40283911 aaatggatcccaataataattaattcaacacccaaaattcttctgattactcattta 40283855  T

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Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 1955013 - 1955084
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatc 131  Q
    ||||||||||||||| ||| || || | |||||||||||||| |||| ||||||| |||| |||| ||||||    
T  1955013 gtgaaatggatcccactaacaatcaatccaacacccaaaattcttctgattacccttttagctaccaaaatc 1955084  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 23550049 - 23550011
Alignment:
Q  60 gtgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    |||||||||||||||||||||| || |||||||||||||    
T  23550049 gtgaaatggatcccaataataatcaattcaacacccaaa 23550011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 44150205 - 44150168
Alignment:
Q  61 tgaaatggatcccaataataaccatttcaacacccaaa 98  Q
    ||||||||||||||||||||| || |||||||||||||    
T  44150205 tgaaatggatcccaataataatcaattcaacacccaaa 44150168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 6440 - 6657
Alignment:
Q  5 atcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaattttt 104  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| ||    
T  6440 atcttattattatcc--ctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaacatttcaacaccaaaaattatt 6537  T
Q  105 ctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacctcaaaatgtacctaattt 204  Q
    |||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||| |||||||||||||            ||||||||||    
T  6538 ctaattacccatttaactacgaaaattcaaacaattatcaaaattcaaatcaatttttcaaccagcgtcctcaaaaca------------tacctaattt 6625  T
Q  205 tggttttgcaccaaatttcaaccagtcatcct 236  Q
    ||||||| ||||||||||||||||||||||||    
T  6626 tggttttacaccaaatttcaaccagtcatcct 6657  T

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Target: scaffold0007 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 166140 - 166289
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||| | ||||||||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  166140 tgaagttttaatcttctttttagtgaaatgaatctcaataataatcctttcaacacccaaaattctgctaattatccatttaactaccaaaatcccaaca 166239  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaacatacct 187  Q
    |||||| |||| |||||||||  | |||||||||||||||||| ||||||    
T  166240 attatcaaaattcaaatcaatcgtccaaccaacgtcctcaaaatatacct 166289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 166285 - 166329
Alignment:
Q  195 tacctaattttggttttgcaccaaatttcaaccagtcatcctatg 239  Q
    |||||||||||||||||||| || ||||||||||| |||||||||    
T  166285 tacctaattttggttttgcatcacatttcaaccagccatcctatg 166329  T

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Target: scaffold0021 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 109954 - 110096
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||| |||  ||||| ||||||    
T  109954 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 110052  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  110053 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 110096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 181
Target Start/End: Complemental strand, 106164 - 106022
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || || ||||||||||||| |||| |||||||||||  |||  ||||||||||||    
T  106164 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttggctatcaaaatcccaaca 106066  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaac 181  Q
    |||||| | | ||||||||||||  |||||||| || |||||||    
T  106065 attatcaacacccaaatcaatttcccaaccaacatcttcaaaac 106022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 248 - 107
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| ||||||||||||||| ||| || ||| ||||||||||||||| |||| ||||||| |||| |||| ||||| ||||||    
T  248 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcatatcaacacccaaaattcttctgattacccttttagctaccaaaattccaaca 150  T
Q  138 attatccaaatccaaatcaatttttcaaccaacgtcctcaaaa 180  Q
    |||||| | | ||||||||||||  |||||||| |||||||||    
T  149 attatcaacacccaaatcaatttcccaaccaacatcctcaaaa 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 1175 - 1242
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttct 106  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| ||||    
T  1175 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttct 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 599 - 468
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaaca 137  Q
    |||||||||| |||| | ||| |||||||||||||||||||||| || |||||||||||||||| |||| ||||  | |||| |||| ||||||||||||    
T  599 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctcattatacttttagctaccaaaatcccaaca 501  T
Q  138 attatccaaatccaaatcaatttttcaaccaac 170  Q
    |||||| | | ||||||||||||  ||||||||    
T  500 attatcaacacccaaatcaatttcccaaccaac 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 124358 - 124317
Alignment:
Q  38 tgaagttttaatcttattttttgtgaaatggatcccaataat 79  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||    
T  124358 tgaagttttaaacttctttttagtgaaatggatcccaataat 124317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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