View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16378_low_124 (Length: 202)
Name: NF16378_low_124
Description: NF16378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16378_low_124 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
| [»] scaffold0028 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 115; Significance: 1e-58; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 41309955 - 41310089
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
41309955 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagttcttgaaacggcagaattgtgcat |
41310054 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||| |
|
|
| T |
41310055 |
agtggcggctaaaaccgccggaatatacatttttt |
41310089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 19546113 - 19546246
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19546113 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtgccaggcgaaatttcggcagtttttgaaacgccagaattgtgcat |
19546212 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||| |||| |||| ||||||||||||| |
|
|
| T |
19546213 |
agtggcggct-aaactgccggaatatacatttttt |
19546246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 25073686 - 25073820
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
25073686 |
tataaaacggcggacaacatggcggcttcgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcat |
25073785 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||||| |
|
|
| T |
25073786 |
agtggcggctaaaaccgccgaaacatacatttttt |
25073820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 25131657 - 25131791
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
25131657 |
tataaaacggcggacaacatggcggcttcgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcat |
25131756 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||||| |
|
|
| T |
25131757 |
agtggcggctaaaaccgccgaaacatacatttttt |
25131791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 40690840 - 40690974
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
40690840 |
tatataacggcggacaacatggcggctacgtaaaaattcctgctttaaacattgtggcaggcgaaatttcggcagtttttaaaacgccagaattgtgcat |
40690939 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| || | | ||||||||||| |
|
|
| T |
40690940 |
agtggcggctaaaaccgccagaacatacatttttt |
40690974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 26701295 - 26701429
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
26701295 |
tataaaacggcggacaacattgcggctacgtaaaaactgccgcttttaacattgtggcagacaaaatttcggcagtttttaaaacgccagaattgtgcat |
26701394 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||||| |
|
|
| T |
26701395 |
agtggcggctaaaaccgccggaacatacatttttt |
26701429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 26971028 - 26971162
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
26971028 |
tataaaacggcggacaacattgcggctacgtaaaaactgccgcttttaacattgtggcagacaaaatttcggcagtttttaaaacgccagaattgtgcat |
26971127 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||||| |
|
|
| T |
26971128 |
agtggcggctaaaaccgccggaacatacatttttt |
26971162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 26223720 - 26223854
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
26223720 |
tatataacggcggacaacatggtggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagttcttgaaacgtcagaattgtgcat |
26223819 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||| |
|
|
| T |
26223820 |
agtggcggctaaaaccgccggaatatacatttttt |
26223854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 40031452 - 40031407
Alignment:
| Q |
40 |
aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttt |
85 |
Q |
| |
|
||||||||| ||||||| |||||||||| |||||||||||||||| |
|
|
| T |
40031452 |
aaactgccggtttaaactttgtggcaggaaaaatttcggcagtttt |
40031407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 107; Significance: 8e-54; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 24497812 - 24497678
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
24497812 |
tataaaacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattgtgcat |
24497713 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||||| |
|
|
| T |
24497712 |
agtggcggctaaaaccgccggaacatacatttttt |
24497678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 12313562 - 12313459
Alignment:
| Q |
24 |
catggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcggctaaaaccc |
123 |
Q |
| |
|
||||| |||| | |||||||| ||| ||||||| |||||| || | ||||||||||| |||||||||||||| |||||||| || || ||||||||||| |
|
|
| T |
12313562 |
catgggggctgcctaaaaactaccgatttaaactttgtggtagacaaaatttcggcaatttttgaaacgccaaaattgtgcatactgacggctaaaaccg |
12313463 |
T |
|
| Q |
124 |
ccgg |
127 |
Q |
| |
|
|||| |
|
|
| T |
12313462 |
ccgg |
12313459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 41678464 - 41678329
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| | |
|
|
| T |
41678464 |
tataaaacggcggataacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggtagtttttaaaacgccagaattgtgtat |
41678365 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacattttttt |
142 |
Q |
| |
|
|||||||||||||||| |||| | |||||||||||| |
|
|
| T |
41678364 |
agtggcggctaaaaccgccggaacatacattttttt |
41678329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 43942320 - 43942453
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||| | |
|
|
| T |
43942320 |
tataaaacggcggacaacatggcggctacgtaaaaactgccactttaaaccttgtggcaggcaaaatatcggcagtttttaaaacgccagaattgtgcat |
43942419 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacattttt |
140 |
Q |
| |
|
||||||||||||||| |||| | |||||||||| |
|
|
| T |
43942420 |
agtggcggctaaaactgccggaacatacattttt |
43942453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 17364294 - 17364180
Alignment:
| Q |
6 |
atatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcg |
105 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| | |
|
|
| T |
17364294 |
atataaaacggcggacaacatggcggttacgtaaaaactgccgctttaaacattgtggtaggcaaaatttcggcagtttttaaaacgccagaattgtaca |
17364195 |
T |
|
| Q |
106 |
tagtggcggctaaaa |
120 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
17364194 |
tagtggcggctaaaa |
17364180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 25806666 - 25806532
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| |||||||| | |||||||||||| |||||||| ||||| |||| ||||||||| | ||||||| ||||| | |||| |||||||||||| | |
|
|
| T |
25806666 |
tataaaacggcggctaccatggcggctacctaaaaactaccgctgcaaacgttgtggcagacaaaatttccacagttataaaaacaccagaattgtgcat |
25806567 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|| ||||||||||||| |||| | ||||||||||| |
|
|
| T |
25806566 |
agcggcggctaaaaccgccggaacatacatttttt |
25806532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 22708202 - 22708120
Alignment:
| Q |
40 |
aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcggctaaaacc |
122 |
Q |
| |
|
|||| |||||||||||| ||||||||| | ||||| |||||||||| || |||||||||||||| ||| ||||| ||||||| |
|
|
| T |
22708202 |
aaaccgccgctttaaactttgtggcagacaaaattccggcagttttgaaaccgccagaattgtgcatagcggcggttaaaacc |
22708120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 20569931 - 20569797
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| | | | |
|
|
| T |
20569931 |
tataaaacggcggacaacatggcggctacgtaaaaaatgccgctttaaacattgtggcaggcaaaatttcggcaatttttaaaacgccagaattatacat |
20569832 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||||| |
|
|
| T |
20569831 |
agtggcggctaaaaccgccggaacatacatttttt |
20569797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 26473934 - 26474060
Alignment:
| Q |
15 |
ggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcgg |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |||| |||||| |||| |||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
26473934 |
ggcggacaacatggcggctacgtaaaaactgccactttaaaccttgtagcaggcaaaatatcggcagtttttaaaacgccagaattgtgcatagtggcgg |
26474033 |
T |
|
| Q |
115 |
ctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
||||||| |||| | ||||||||||| |
|
|
| T |
26474034 |
ctaaaactgccggaacatacatttttt |
26474060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 27301461 - 27301370
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaat |
99 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |||||||||||| |
|
|
| T |
27301461 |
tataaaacggcggacaacatggcggctacgtaaaaactgctgctttaaacattgtggcaggcaaaatttcggcag-ttttaaaacgccagaat |
27301370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 8697792 - 8697873
Alignment:
| Q |
40 |
aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcggctaaaac |
121 |
Q |
| |
|
|||| |||||||||||| |||||| || | |||||||||||||||| || |||||||| ||| | ||| |||||||||||| |
|
|
| T |
8697792 |
aaaccgccgctttaaactttgtggtagacaaaatttcggcagttttgaaaccgccagaaatgtacatagcggcggctaaaac |
8697873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 5660831 - 5660957
Alignment:
| Q |
15 |
ggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcgg |
114 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| | ||||||||| |
|
|
| T |
5660831 |
ggcggacaacgtggcggctacgtaaaaactgccgctttaaacattgtggcaggcaaaatttcggcagtttttaaaacgcctaaattgtacatagtggcgg |
5660930 |
T |
|
| Q |
115 |
ctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||| |||| | ||||||||||| |
|
|
| T |
5660931 |
ctaaaaccgccggaacatacatttttt |
5660957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 18558916 - 18558782
Alignment:
| Q |
7 |
tatataacggcggacaacatggcggctacgtaaaaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgt |
106 |
Q |
| |
|
|||| |||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| | |
|
|
| T |
18558916 |
tataaaacggcggacaatatgacggctacataaaaactgccgttttaaacattgtggcaggcaaaatttcggcagtttttaaaacgccagaattatgcat |
18558817 |
T |
|
| Q |
107 |
agtggcggctaaaacccccgggatatacatttttt |
141 |
Q |
| |
|
|||||||||||||||| |||| | ||||||||||| |
|
|
| T |
18558816 |
agtggcggctaaaaccgccggaacatacatttttt |
18558782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 20465 - 20546
Alignment:
| Q |
40 |
aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcggctaaaac |
121 |
Q |
| |
|
|||| |||||||||||| ||||||||| | |||||||||||||||| || |||||||| ||| | ||| |||||||||||| |
|
|
| T |
20465 |
aaaccgccgctttaaactttgtggcagacaaaatttcggcagttttgaaaccgccagaaatgtacatagcggcggctaaaac |
20546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 18199 - 18118
Alignment:
| Q |
40 |
aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcggctaaaac |
121 |
Q |
| |
|
|||| |||||||||||| |||||| || | |||||||||||||||| || |||||||| ||| | |||||||||||||||| |
|
|
| T |
18199 |
aaaccgccgctttaaactttgtggtagacaaaatttcggcagttttgaaaccgccagaaatgtacatagtggcggctaaaac |
18118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 5879125 - 5879044
Alignment:
| Q |
40 |
aaactgccgctttaaacattgtggcaggcgaaatttcggcagtttttgaaacgccagaattgtgcgtagtggcggctaaaac |
121 |
Q |
| |
|
|||| |||||||||||| ||||||||| | |||||||||| ||||| || |||||||| ||| | ||| |||||||||||| |
|
|
| T |
5879125 |
aaaccgccgctttaaactttgtggcagacaaaatttcggccgttttgaaaccgccagaaatgtacatagcggcggctaaaac |
5879044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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