View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16378_low_79 (Length: 280)

Name: NF16378_low_79
Description: NF16378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16378_low_79
NF16378_low_79
[»] chr2 (38 HSPs)
chr2 (74-261)||(30563793-30563981)
chr2 (1-74)||(37720203-37720277)
chr2 (1-73)||(7664654-7664727)
chr2 (1-71)||(6325328-6325399)
chr2 (1-72)||(16911250-16911321)
chr2 (1-72)||(18750107-18750178)
chr2 (1-70)||(8851151-8851221)
chr2 (1-74)||(8851563-8851637)
chr2 (1-70)||(26692801-26692871)
chr2 (1-74)||(7979984-7980057)
chr2 (1-73)||(16910827-16910900)
chr2 (10-73)||(17850978-17851042)
chr2 (1-75)||(7664246-7664321)
chr2 (1-76)||(7979564-7979638)
chr2 (7-76)||(5378658-5378728)
chr2 (6-71)||(19141446-19141511)
chr2 (1-73)||(38490822-38490894)
chr2 (1-66)||(6324924-6324990)
chr2 (1-74)||(17851383-17851457)
chr2 (1-70)||(26692399-26692469)
chr2 (7-75)||(5379946-5380015)
chr2 (1-70)||(19141830-19141898)
chr2 (1-70)||(41790494-41790563)
chr2 (6-70)||(18749729-18749793)
chr2 (1-76)||(26841584-26841660)
chr2 (1-76)||(41790893-41790969)
chr2 (1-75)||(2639463-2639538)
chr2 (1-74)||(2638819-2638893)
chr2 (1-70)||(5793450-5793520)
chr2 (22-75)||(30190921-30190975)
chr2 (22-74)||(18296695-18296748)
chr2 (22-74)||(20347466-20347519)
chr2 (1-73)||(26842219-26842292)
chr2 (24-73)||(43495609-43495658)
chr2 (21-73)||(6171156-6171208)
chr2 (1-72)||(18296077-18296149)
chr2 (22-74)||(26737481-26737532)
chr2 (22-70)||(32673145-32673193)
[»] chr8 (30 HSPs)
chr8 (6-73)||(16169174-16169241)
chr8 (1-74)||(41662520-41662594)
chr8 (1-74)||(24473749-24473823)
chr8 (1-77)||(6199077-6199154)
chr8 (6-78)||(9623497-9623570)
chr8 (1-77)||(37396704-37396781)
chr8 (1-74)||(17431286-17431360)
chr8 (1-70)||(25439107-25439176)
chr8 (8-76)||(34498543-34498612)
chr8 (6-73)||(37397131-37397199)
chr8 (7-76)||(2856523-2856593)
chr8 (1-74)||(20861619-20861693)
chr8 (10-71)||(25438794-25438856)
chr8 (1-70)||(34498125-34498195)
chr8 (1-74)||(13936722-13936795)
chr8 (1-73)||(16169588-16169661)
chr8 (1-76)||(13026632-13026708)
chr8 (1-76)||(15444628-15444704)
chr8 (6-73)||(9623866-9623935)
chr8 (9-73)||(24473343-24473408)
chr8 (27-74)||(9465606-9465653)
chr8 (1-74)||(9823342-9823416)
chr8 (1-51)||(33727086-33727136)
chr8 (20-78)||(43162229-43162287)
chr8 (1-73)||(39724029-39724102)
chr8 (1-76)||(6198655-6198731)
chr8 (20-74)||(12281123-12281178)
chr8 (1-71)||(15444213-15444284)
chr8 (1-70)||(13027262-13027332)
chr8 (22-73)||(41662405-41662457)
[»] chr3 (39 HSPs)
chr3 (6-73)||(44008387-44008454)
chr3 (1-73)||(42672978-42673050)
chr3 (1-75)||(3353532-3353606)
chr3 (1-78)||(3353123-3353200)
chr3 (1-74)||(40848520-40848593)
chr3 (1-73)||(42673277-42673349)
chr3 (1-75)||(48159895-48159970)
chr3 (1-71)||(22429577-22429647)
chr3 (1-82)||(27238456-27238538)
chr3 (1-73)||(10348780-10348853)
chr3 (1-70)||(24485025-24485094)
chr3 (9-73)||(24485449-24485513)
chr3 (8-75)||(40848949-40849017)
chr3 (1-79)||(36180971-36181050)
chr3 (1-70)||(27238881-27238951)
chr3 (1-74)||(53687887-53687961)
chr3 (1-70)||(53766166-53766236)
chr3 (1-74)||(26007181-26007254)
chr3 (1-73)||(47666316-47666389)
chr3 (1-73)||(48160314-48160387)
chr3 (1-74)||(36180555-36180627)
chr3 (1-73)||(44007967-44008040)
chr3 (10-74)||(53766569-53766634)
chr3 (1-76)||(26007600-26007676)
chr3 (1-73)||(53688284-53688356)
chr3 (6-76)||(47665908-47665979)
chr3 (1-72)||(22429159-22429231)
chr3 (1-73)||(42456176-42456247)
chr3 (11-77)||(42455786-42455853)
chr3 (22-76)||(8315084-8315138)
chr3 (6-77)||(1928420-1928491)
chr3 (1-72)||(10348480-10348552)
chr3 (1-73)||(21896492-21896564)
chr3 (22-74)||(47871124-47871176)
chr3 (22-76)||(14015966-14016020)
chr3 (22-75)||(9026734-9026787)
chr3 (22-73)||(8314013-8314065)
chr3 (22-73)||(20969021-20969073)
chr3 (22-70)||(26540694-26540742)
[»] chr5 (39 HSPs)
chr5 (1-76)||(43464173-43464248)
chr5 (1-75)||(10098922-10098996)
chr5 (1-84)||(26571145-26571230)
chr5 (1-74)||(37610201-37610274)
chr5 (1-74)||(37780319-37780392)
chr5 (1-76)||(12498564-12498640)
chr5 (1-72)||(22729421-22729492)
chr5 (8-77)||(12498916-12498986)
chr5 (1-70)||(43463759-43463828)
chr5 (1-73)||(22729008-22729080)
chr5 (1-70)||(21207229-21207299)
chr5 (1-78)||(26570724-26570802)
chr5 (1-74)||(34147491-34147565)
chr5 (6-74)||(19514949-19515018)
chr5 (1-73)||(37610599-37610671)
chr5 (1-73)||(19514525-19514599)
chr5 (8-70)||(30401885-30401948)
chr5 (1-76)||(41072195-41072270)
chr5 (1-70)||(2817152-2817222)
chr5 (1-73)||(3888239-3888312)
chr5 (1-73)||(10098519-10098592)
chr5 (1-73)||(37780723-37780796)
chr5 (1-75)||(11351408-11351483)
chr5 (1-71)||(2817556-2817626)
chr5 (1-70)||(3888643-3888713)
chr5 (6-70)||(11316717-11316782)
chr5 (6-75)||(31569905-31569974)
chr5 (1-74)||(34147140-34147212)
chr5 (1-72)||(25940995-25941067)
chr5 (1-74)||(25940520-25940594)
chr5 (1-73)||(18817592-18817665)
chr5 (1-76)||(18816949-18817025)
chr5 (22-76)||(22428931-22428985)
chr5 (22-76)||(22429198-22429252)
chr5 (24-76)||(16466746-16466799)
chr5 (22-74)||(26020449-26020502)
chr5 (1-74)||(42919304-42919377)
chr5 (22-70)||(9665560-9665607)
chr5 (22-74)||(41383169-41383221)
[»] chr1 (56 HSPs)
chr1 (1-75)||(9347532-9347606)
chr1 (1-74)||(46824259-46824333)
chr1 (1-76)||(6703457-6703533)
chr1 (1-72)||(13918848-13918920)
chr1 (1-73)||(27172116-27172188)
chr1 (1-73)||(49317752-49317824)
chr1 (1-88)||(20480593-20480680)
chr1 (1-74)||(4692414-4692488)
chr1 (1-73)||(6703875-6703948)
chr1 (1-73)||(13918446-13918519)
chr1 (1-74)||(20480167-20480240)
chr1 (1-85)||(999506-999590)
chr1 (1-75)||(32163024-32163099)
chr1 (1-70)||(42611188-42611258)
chr1 (1-73)||(9347126-9347199)
chr1 (1-74)||(20371039-20371111)
chr1 (1-73)||(26814694-26814767)
chr1 (1-73)||(48105097-48105170)
chr1 (6-73)||(20371338-20371406)
chr1 (1-73)||(21687448-21687520)
chr1 (9-73)||(50615610-50615674)
chr1 (9-73)||(50623438-50623502)
chr1 (1-75)||(28633718-28633793)
chr1 (6-68)||(32162734-32162797)
chr1 (1-71)||(50526453-50526524)
chr1 (1-70)||(50430062-50430132)
chr1 (1-70)||(999115-999184)
chr1 (1-73)||(21687025-21687098)
chr1 (8-73)||(47498301-47498365)
chr1 (1-78)||(49318147-49318224)
chr1 (1-75)||(26815100-26815175)
chr1 (1-75)||(28634138-28634213)
chr1 (8-70)||(42611602-42611665)
chr1 (1-70)||(46823846-46823916)
chr1 (1-70)||(48104681-48104751)
chr1 (1-73)||(49318424-49318496)
chr1 (12-74)||(19007734-19007796)
chr1 (7-76)||(19008737-19008807)
chr1 (1-74)||(50429655-50429729)
chr1 (1-70)||(50949164-50949234)
chr1 (1-76)||(44911022-44911098)
chr1 (1-74)||(27172522-27172596)
chr1 (22-72)||(47498497-47498547)
chr1 (1-74)||(49284408-49284482)
chr1 (22-71)||(17518604-17518653)
chr1 (22-74)||(13589661-13589713)
chr1 (7-74)||(39691987-39692055)
chr1 (1-60)||(44911418-44911477)
chr1 (1-75)||(50949546-50949621)
chr1 (25-74)||(50615239-50615289)
chr1 (25-74)||(50623067-50623117)
chr1 (24-73)||(1176717-1176766)
chr1 (22-74)||(8108995-8109048)
chr1 (1-70)||(44224100-44224169)
chr1 (22-74)||(47955305-47955358)
chr1 (22-73)||(48190771-48190823)
[»] chr4 (39 HSPs)
chr4 (1-77)||(292778-292855)
chr4 (1-74)||(48405961-48406034)
chr4 (6-76)||(9023241-9023312)
chr4 (1-74)||(28196754-28196828)
chr4 (1-73)||(4239347-4239420)
chr4 (1-77)||(28196342-28196419)
chr4 (1-73)||(32703631-32703704)
chr4 (1-85)||(23539829-23539912)
chr4 (1-72)||(25161879-25161951)
chr4 (1-76)||(39744446-39744522)
chr4 (1-75)||(9380722-9380797)
chr4 (1-76)||(44468904-44468978)
chr4 (1-74)||(293198-293272)
chr4 (1-73)||(9380307-9380380)
chr4 (1-70)||(12757770-12757839)
chr4 (1-74)||(26207360-26207433)
chr4 (1-73)||(39086604-39086677)
chr4 (1-74)||(169012-169087)
chr4 (9-74)||(9023669-9023735)
chr4 (1-73)||(169420-169493)
chr4 (1-73)||(23540233-23540306)
chr4 (1-77)||(39744026-39744103)
chr4 (6-83)||(39912473-39912550)
chr4 (1-72)||(43292038-43292110)
chr4 (1-74)||(26207727-26207801)
chr4 (1-74)||(32703224-32703298)
chr4 (1-73)||(43292338-43292411)
chr4 (1-70)||(48406366-48406435)
chr4 (1-75)||(50678777-50678852)
chr4 (6-76)||(12758190-12758260)
chr4 (10-75)||(56505691-56505757)
chr4 (22-75)||(3930482-3930535)
chr4 (22-77)||(11241663-11241718)
chr4 (22-75)||(22681881-22681935)
chr4 (1-74)||(36095816-36095890)
chr4 (1-70)||(36096456-36096526)
chr4 (1-74)||(39912053-39912126)
chr4 (22-74)||(24775785-24775838)
chr4 (1-73)||(50679405-50679478)
[»] chr7 (41 HSPs)
chr7 (9-75)||(18864391-18864457)
chr7 (1-74)||(13744214-13744287)
chr7 (1-84)||(37971949-37972033)
chr7 (1-73)||(48359320-48359392)
chr7 (1-75)||(10533032-10533107)
chr7 (1-75)||(37889240-37889315)
chr7 (1-74)||(37972377-37972451)
chr7 (1-73)||(9035274-9035347)
chr7 (1-70)||(22740572-22740641)
chr7 (1-73)||(37888833-37888906)
chr7 (1-76)||(20418885-20418961)
chr7 (6-73)||(3204669-3204735)
chr7 (1-74)||(20419305-20419379)
chr7 (1-74)||(22740155-22740229)
chr7 (6-74)||(38826899-38826968)
chr7 (6-70)||(36527387-36527451)
chr7 (1-75)||(42419009-42419084)
chr7 (1-74)||(3205074-3205148)
chr7 (9-74)||(17156966-17157032)
chr7 (1-70)||(18863970-18864040)
chr7 (1-75)||(48359639-48359713)
chr7 (1-73)||(13741557-13741630)
chr7 (1-74)||(29292921-29292995)
chr7 (1-76)||(9034864-9034941)
chr7 (10-74)||(16198967-16199032)
chr7 (1-73)||(36527779-36527852)
chr7 (1-84)||(44599478-44599562)
chr7 (1-74)||(44600116-44600190)
chr7 (1-73)||(29293327-29293400)
chr7 (1-76)||(13863310-13863386)
chr7 (22-76)||(9412327-9412382)
chr7 (22-73)||(23686421-23686472)
chr7 (22-72)||(8953891-8953941)
chr7 (1-74)||(13863938-13864011)
chr7 (22-72)||(18925324-18925373)
chr7 (1-74)||(42418590-42418664)
chr7 (21-73)||(18925062-18925115)
chr7 (22-73)||(3687658-3687710)
chr7 (1-76)||(8643747-8643823)
chr7 (22-77)||(13772637-13772693)
chr7 (1-76)||(46816292-46816368)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-73)||(185255-185328)
scaffold0017 (1-72)||(184840-184912)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-74)||(19620-19693)
scaffold0176 (8-88)||(20031-20111)
[»] scaffold0069 (2 HSPs)
scaffold0069 (1-74)||(50074-50146)
scaffold0069 (6-73)||(50492-50560)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-73)||(744-816)
scaffold0460 (1-74)||(329-403)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-74)||(38676-38750)
[»] chr6 (23 HSPs)
chr6 (1-70)||(32733977-32734047)
chr6 (6-74)||(7654534-7654603)
chr6 (1-73)||(10087839-10087912)
chr6 (8-73)||(22684346-22684411)
chr6 (8-73)||(22754657-22754722)
chr6 (1-74)||(29074353-29074426)
chr6 (1-74)||(29079117-29079190)
chr6 (1-74)||(29106926-29106999)
chr6 (1-73)||(33974280-33974353)
chr6 (11-71)||(403651-403711)
chr6 (1-74)||(13177037-13177110)
chr6 (1-72)||(22755070-22755142)
chr6 (1-75)||(33829617-33829692)
chr6 (22-76)||(13579653-13579707)
chr6 (22-75)||(10039674-10039727)
chr6 (1-73)||(33828990-33829063)
chr6 (22-70)||(3825530-3825578)
chr6 (6-74)||(2354796-2354865)
chr6 (1-73)||(2354409-2354481)
chr6 (22-73)||(11656784-11656836)
chr6 (22-74)||(21031978-21032030)
chr6 (24-80)||(30388055-30388111)
chr6 (22-74)||(33655117-33655169)
[»] scaffold0029 (2 HSPs)
scaffold0029 (12-82)||(10311-10380)
scaffold0029 (1-74)||(9904-9979)
[»] scaffold0110 (1 HSPs)
scaffold0110 (22-78)||(45809-45865)
[»] scaffold0015 (1 HSPs)
scaffold0015 (22-73)||(17158-17209)
[»] scaffold0319 (2 HSPs)
scaffold0319 (22-73)||(6699-6750)
scaffold0319 (22-81)||(6386-6446)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-73)||(6776-6849)
[»] scaffold0802 (1 HSPs)
scaffold0802 (22-73)||(1422-1474)


Alignment Details
Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 74 - 261
Target Start/End: Complemental strand, 30563981 - 30563793
Alignment:
Q  74 taatattaaatttgagatgtattaaatatagataaacaatgaaagtacaattttgtttactaaattgactgaccattagagaagctgaatcatcata-gt 172  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  30563981 taatattaaatttgagaagtattaaatatagataaacaatgaaagtacaattttgtttaccaaattgactgaccattagagaagctgaatcatcataagt 30563882  T
Q  173 acattaatgacaataagttatgagctggaaggagataccgtgtgatggatggaaattgagctgtaacagagagtttctcctcaatttcc 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30563881 acattaatgacaataagttatgagctggaaggagataccgtgtgatggatggaaattgagctgtaacagagagtttctcctcaatttcc 30563793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37720277 - 37720203
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  37720277 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7664654 - 7664727
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  7664654 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6325328 - 6325399
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaag 71  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  6325328 atcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 16911250 - 16911321
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |  |||||||||||||||    
T  16911250 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaagc 16911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18750107 - 18750178
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| ||| ||||||||||||||    
T  18750107 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8851221 - 8851151
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  8851221 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8851563 - 8851637
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  8851563 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26692801 - 26692871
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  26692801 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7979984 - 7980057
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| |||||||| |||||||||||  | ||||||||||||||||||    
T  7979984 atcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcct 7980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16910900 - 16910827
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||| | || |||||||||||||||||||    
T  16910900 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 17851042 - 17850978
Alignment:
Q  10 ttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    ||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  17851042 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7664321 - 7664246
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| |||||||||  |||||||| || |||||||||||||||||||||    
T  7664321 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 7664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7979638 - 7979564
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| | ||||||||||||| ||||||||    
T  7979638 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactataag-ggaaaagtgcaataaagcctaa 7979564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 5378728 - 5378658
Alignment:
Q  7 cgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    ||||| |||||| | |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  5378728 cgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaa 5378658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 19141511 - 19141446
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaag 71  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  19141511 tcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38490822 - 38490894
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||| ||||| |||||||| |||||||||| ||||||||||  | ||||||||||||||||    
T  38490822 atcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagggaggaaagtgcaattaagcc 38490894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6324990 - 6324924
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaa 66  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||||||||| || ||||||||||||    
T  6324990 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17851383 - 17851457
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||| ||||| |||||||||||||||||||  ||  ||||||||||||||||||    
T  17851383 atcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactataaaagaaaaaagtgcaattaagcct 17851457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26692469 - 26692399
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||| |||||||||| | | ||||||||||||||    
T  26692469 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 5379946 - 5380015
Alignment:
Q  7 cgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagccta 75  Q
    ||||| |||||| | |||||||||| |||||||||| |||||||||| || |||||||||||||||||||    
T  5379946 cgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagccta 5380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19141830 - 19141898
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| |||||| |||||||| | |||||||| ||||||||||||||||||||| || |||||||||||||    
T  19141830 atcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactatagg-gggaaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41790563 - 41790494
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| |||||| |||| ||| |||||||||| ||||||||| ||||||||||| |||||| |||||||||    
T  41790563 atcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 18749793 - 18749729
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    ||||||||||||||| ||||||||||  || ||||| ||||||| ||||| ||||||||||||||    
T  18749793 tcgtttaaaactatggggtgcaaaatcacataattgacaaactagaggagtaaaagtgcaattaa 18749729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26841660 - 26841584
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||||||||||||||    
T  26841660 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctaa 26841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41790893 - 41790969
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    |||| |||||| |||| ||| || ||||||| |||||||||||||| |||| || ||||||||||||||||||||||    
T  41790893 atcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcctaa 41790969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2639463 - 2639538
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagccta 75  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||||||||||||||||||    
T  2639463 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2638893 - 2638819
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| |||||||||| |||| |||||||||| ||||||||||||||  ||||| | ||||| |||||||||||||    
T  2638893 atcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5793520 - 5793450
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaacta-taggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||  | |||||||| |||||||||||||||||  ||| ||||||||||||||||    
T  5793520 atcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 30190975 - 30190921
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagccta 75  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||||||||||||    
T  30190975 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 18296695 - 18296748
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||||||||| ||||||||||||||  ||||| | |||||||||||||||||||    
T  18296695 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 20347466 - 20347519
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||||||||| ||||||||||||||  ||| || ||||||||||||||||||||    
T  20347466 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 20347519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26842219 - 26842292
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||| |||||||    
T  26842219 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 43495609 - 43495658
Alignment:
Q  24 tgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||||||| |||||||| ||||| |||||| || ||||||||||||||||    
T  43495609 tgcaaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 6171208 - 6171156
Alignment:
Q  21 aggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||| ||||||||  ||||  ||||| |||||||||||||||||||    
T  6171208 aggtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18296149 - 18296077
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagc 72  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||||| |||||||||    
T  18296149 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 26737532 - 26737481
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  26737532 ggtgcaaaatcgcacaattagcaaaagataggag-aaaagtgcaattaagcct 26737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 32673145 - 32673193
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||||||||| ||||||||||||||  ||||| | ||||||||||||||    
T  32673145 ggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaa 32673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 16169241 - 16169174
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16169241 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41662594 - 41662520
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  41662594 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcct 41662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24473749 - 24473823
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  24473749 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcct 24473823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6199077 - 6199154
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaat 77  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  6199077 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagcctaat 6199154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 9623570 - 9623497
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaagcctaata 78  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  9623570 tcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagccaaata 9623497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37396781 - 37396704
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaat 77  Q
    |||| ||||||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||    
T  37396781 atcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagcctaat 37396704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17431360 - 17431286
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| |||||||||||||||||||| ||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  17431360 atcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcct 17431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25439107 - 25439176
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||||||||||||||    
T  25439107 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 34498543 - 34498612
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    ||||||||||||| |||||||||| |||||||| |||||||||| || ||||||||||||||||||||||    
T  34498543 gtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcctaa 34498612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 37397131 - 37397199
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  37397131 tcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 2856593 - 2856523
Alignment:
Q  7 cgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||| ||||||||| | |||||||||||||    
T  2856593 cgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagcctaa 2856523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20861619 - 20861693
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| |||||||||||| |||||||| || |||| |||||||||||||    
T  20861619 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcct 20861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 25438856 - 25438794
Alignment:
Q  10 ttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaag 71  Q
    ||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  25438856 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34498195 - 34498125
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  34498195 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13936795 - 13936722
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| |||||||||| |||| |||||||||| |||||||||| |||  ||||| ||||||||||||||||||||    
T  13936795 atcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcct 13936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16169588 - 16169661
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| |||||||||||||| || |||||| |||||||||||  |||||||| ||||||||||||||||||||||    
T  16169588 atcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 16169661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13026708 - 13026632
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||  |||||||||||||| ||||||||||||||  ||||| | |||||||||||||||||||||    
T  13026708 atcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctaa 13026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15444628 - 15444704
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||| |||||||||| |||||||||| ||| |||||| || |||||||||||||| |||||    
T  15444628 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaacctaa 15444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 9623866 - 9623935
Alignment:
Q  6 tcgtttaaaactat--gaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||  | ||||||||||  ||| ||||||||||||||||| ||||||||||||||||||    
T  9623866 tcgtttaaaactatatggggtgcaaaatcacacgattggcaaactataggatgaaaagtgcaattaagcc 9623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 24473408 - 24473343
Alignment:
Q  9 tttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcc 73  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||| || |||||||||||||||||    
T  24473408 tttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 9465653 - 9465606
Alignment:
Q  27 aaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagataggaggaaaagtgcaattaagcct 9465606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9823342 - 9823416
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||||||||||||    
T  9823342 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33727086 - 33727136
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata 51  Q
    |||| |||||||||||||||| ||||||||| |||||||| ||||||||||    
T  33727086 atcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactata 33727136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43162287 - 43162229
Alignment:
Q  20 gaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaata 78  Q
    |||||||||||| ||||||||  |||| |||||| ||||||||||||||||||| ||||    
T  43162287 gaggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgcaattaagccaaata 43162229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39724029 - 39724102
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||||||||||||||||    
T  39724029 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6198731 - 6198655
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||  |||||||||| |||||||||| | || ||| ||  |||||||||||||||||||||    
T  6198731 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaattaagcctaa 6198655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 12281178 - 12281123
Alignment:
Q  20 gaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||||||||||| ||||||||||||||  ||| || ||||||||||||||||||||    
T  12281178 gaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15444284 - 15444213
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaag 71  Q
    |||| |||||||||||||||   || ||||||| |||||||||||||||||| | |||||| ||||||||||    
T  15444284 atcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13027262 - 13027332
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaa 70  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||||||||    
T  13027262 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 41662405 - 41662457
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||||||||| ||||||||||||||  ||| || |||||||||||||||||||    
T  41662405 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 44008387 - 44008454
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44008387 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42673050 - 42672978
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  42673050 atcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3353532 - 3353606
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||    
T  3353532 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaactaaaccta 3353606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3353200 - 3353123
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaata 78  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  3353200 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccaaata 3353123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40848593 - 40848520
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  40848593 atcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcct 40848520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42673277 - 42673349
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  42673277 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48159970 - 48159895
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  48159970 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 48159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22429577 - 22429647
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaag 71  Q
    |||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  22429577 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggagggaaagtgcaattaag 22429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27238538 - 27238456
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagga-ggaaaagtgcaattaagcctaatattaa 82  Q
    |||| ||||||||||||||  |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  27238538 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagcctaaaattaa 27238456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10348780 - 10348853
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  10348780 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagcc 10348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24485094 - 24485025
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||    
T  24485094 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaatgtaattaa 24485025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 24485449 - 24485513
Alignment:
Q  9 tttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  24485449 tttaaaactatggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaagcc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 40848949 - 40849017
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaagccta 75  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  40848949 gtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagccta 40849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36180971 - 36181050
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaatat 79  Q
    |||| ||||||||||||||| ||| |||||| ||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  36180971 atcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcctaatat 36181050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27238881 - 27238951
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  27238881 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 53687961 - 53687887
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  53687961 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 53687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 53766236 - 53766166
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  53766236 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26007254 - 26007181
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| || ||| |||||||||||||    
T  26007254 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaagcct 26007181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47666316 - 47666389
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| |||||| |||| ||| |||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  47666316 atcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48160314 - 48160387
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || || ||||||||||||||||    
T  48160314 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36180627 - 36180555
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||||||||||||    
T  36180627 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagg-ggaaatgtgcaattaagcct 36180555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44008040 - 44007967
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| |||||||||||||| || |||||| |||||||||||  |||||||| ||||||||||||||||||||||    
T  44008040 atcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 44007967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 53766569 - 53766634
Alignment:
Q  10 ttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    ||||||||||  ||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  53766569 ttaaaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcct 53766634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26007600 - 26007676
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaa 76  Q
    |||| |||||||||| ||||| ||||||||| | ||||||||||||||||||| || |||||||||||||| |||||    
T  26007600 atcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaaacctaa 26007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 53688284 - 53688356
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| |||||| ||||||||  ||||||||| ||||||||||||||||||||| |  ||||||||||||||||    
T  53688284 atcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactataggggagaaagtgcaattaagcc 53688356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 47665979 - 47665908
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaagcctaa 76  Q
    |||||| |||| |||||||||||||| ||||||||| |||||||| ||| | ||||||||||||||||||||    
T  47665979 tcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcctaa 47665908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22429231 - 22429159
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||  |||||||| | |||||||||||||| |||||| | |||||||||||||||||    
T  22429231 atcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42456176 - 42456247
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||  |||| |||| || ||||||||||||||||    
T  42456176 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggggaactttagg-gggaaagtgcaattaagcc 42456247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 42455853 - 42455786
Alignment:
Q  11 taaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaat 77  Q
    |||||||||  || ||||||| ||||||||| ||||||||||| || |||||||||||||||||||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctaat 42455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 8315084 - 8315138
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||||||||| ||||||||| |||| |||||| || |||||||||||||||||||    
T  8315084 ggtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaagcctaa 8315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 1928420 - 1928491
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaat 77  Q
    |||||||||| |||| |||||||||| ||||||||||||||  ||| ||||||||| ||||||||| ||||||    
T  1928420 tcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggaggaaaa-tgcaattaaacctaat 1928491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10348552 - 10348480
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagc 72  Q
    |||| |||||||||| |||| | |||||||||| ||||||| ||||||||| | | |||||||||||||||||    
T  10348552 atcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaagc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21896492 - 21896564
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| |||| |||||| ||| |||||||||| ||||||||| |||| |||||| | |||| ||||||||||||    
T  21896492 atcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 47871124 - 47871176
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||||||||| |||||||| |||||  ||||| ||||||||||||||||||||    
T  47871124 ggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 47871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 14015966 - 14016020
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||||||||| |||||||| |||||  |||||| ||||||||||||||| |||||    
T  14015966 ggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaaacctaa 14016020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 9026787 - 9026734
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||||||||||||||||||  ||||  |||||||||||| ||||||||| ||||    
T  9026787 ggtgcaaaattgcacaattaacaaaagataggaggaaaaatgcaattaaaccta 9026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 8314065 - 8314013
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||||||||| ||||||||| |||| |||||| | ||||||||||||||||||    
T  8314065 ggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 20969021 - 20969073
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||||||||| ||||||||||||||  ||| || |||||||||||||||||||    
T  20969021 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 26540742 - 26540694
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||||||||||||||||||| ||||  ||||| | ||||||||||||||    
T  26540742 ggtgcaaaattgcacaattgacaaaaaataggggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43464173 - 43464248
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||    
T  43464173 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcctaa 43464248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10098922 - 10098996
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  10098922 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaagtgcaattaaaccta 10098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26571145 - 26571230
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa-tattaaat 84  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  26571145 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaagtattaaat 26571230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37610274 - 37610201
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  37610274 atcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcct 37610201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37780392 - 37780319
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  37780392 atcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcct 37780319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12498640 - 12498564
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  12498640 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaa 12498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22729421 - 22729492
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  22729421 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 12498916 - 12498986
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaat 77  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||    
T  12498916 gtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaat 12498986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43463828 - 43463759
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  43463828 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22729080 - 22729008
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| |||||||||||||||| ||||||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  22729080 atcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21207299 - 21207229
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  21207299 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26570802 - 26570724
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaata 78  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||||||    
T  26570802 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagcctaata 26570724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34147491 - 34147565
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||| ||||||||||||| |||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||    
T  34147491 atcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 34147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 19514949 - 19515018
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  19514949 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37610599 - 37610671
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||| |||||||||||||| |||||||| |||||||||||| || ||||| ||||||||||    
T  37610599 atcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaagcc 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19514599 - 19514525
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata--ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||  || || ||||||||||||||||    
T  19514599 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaagcc 19514525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 30401948 - 30401885
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaa 70  Q
    ||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30401948 gtttaaaactatgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaa 30401885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41072195 - 41072270
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||  |||||||||| | ||||||| ||||||||||||||||||||| |||||| |||||    
T  41072195 atcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactataggaggaaaagtgtaattaaacctaa 41072270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2817222 - 2817152
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| |||||||||| |||| | |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  2817222 atcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3888312 - 3888239
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| | ||||||||||||||||| || ||||| |||||||||||||    
T  3888312 atcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaagcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10098592 - 10098519
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||  | |||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  10098592 atcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagcc 10098519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37780723 - 37780796
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||| |||||||||||||| |||||||| |||||||||| || |||||||| ||||||||||    
T  37780723 atcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11351408 - 11351483
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagccta 75  Q
    |||| |||||||||| |||| |||||||||| ||||||||||||||  ||||||| ||||||||||||||| ||||    
T  11351408 atcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2817556 - 2817626
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaag 71  Q
    |||| ||||||||||||||  | || ||||| |||||||| |||||||||||| |||||||||||||||||    
T  2817556 atcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactatagggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3888643 - 3888713
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagga-ggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| | |||||||||||| |||| || ||||||||||||||||    
T  3888643 atcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 11316782 - 11316717
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagga-ggaaaagtgcaattaa 70  Q
    |||||||||| |||  | |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  11316782 tcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 31569974 - 31569905
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    ||||||||||  |||||||||||||| ||||||||| ||||  ||||| |||||||||||||||| ||||    
T  31569974 tcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaaaccta 31569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34147212 - 34147140
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||| | |||||||||| |||||||||  |||||||| | ||||||||||||||||||||    
T  34147212 atcgctcgtttaaaactacggggtgcaaaatcgcacaattgataaactataag-ggaaaagtgcaattaagcct 34147140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25940995 - 25941067
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagga-ggaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| | |||||||| ||| ||||  |||||||||||| ||||||||||||||||||    
T  25940995 atcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25940594 - 25940520
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||  |||||||||| ||||||||| ||||||||||| |  |||| |||||||||||||    
T  25940594 atcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcct 25940520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 18817592 - 18817665
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||||||||||||||||    
T  18817592 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18817025 - 18816949
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||| |||||||||||||||    
T  18817025 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctaa 18816949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 22428985 - 22428931
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||||||||| |||||||| |||||  ||||| || |||||||||||||||||||    
T  22428985 ggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcctaa 22428931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 22429198 - 22429252
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||||||||| |||||||| |||||  ||||| |||||| |||||||||||||||    
T  22429198 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcctaa 22429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 16466746 - 16466799
Alignment:
Q  24 tgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaa 76  Q
    |||||||| |||||||| ||||| |||||| || ||||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcctaa 16466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 26020502 - 26020449
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactatagg-aggaaaagtgcaattaagcct 74  Q
    |||||||||| |||||||| |||||  ||||| |||||||||||||||||||||    
T  26020502 ggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42919377 - 42919304
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||  ||| |||| ||||| |||||||||| ||| |||||| | ||||| ||||||||||||    
T  42919377 atcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatataggggaaaaagagcaattaagcct 42919304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 9665607 - 9665560
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    ||||||||||||||||||| |||||  ||||| ||||||||||||||||    
T  9665607 ggtgcaaaattgcacaattagcaaaagatagg-ggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 41383169 - 41383221
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||||||||| |||||||| |||||  ||||| |||||||| |||||||||||    
T  41383169 ggtgcaaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagcct 41383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9347532 - 9347606
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  9347532 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaagccta 9347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46824259 - 46824333
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46824259 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcct 46824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6703533 - 6703457
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaa 76  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||    
T  6703533 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagcctaa 6703457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13918848 - 13918920
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagc 72  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  13918848 atcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27172188 - 27172116
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  27172188 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 49317824 - 49317752
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49317824 atcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20480593 - 20480680
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaatattaaatttga 88  Q
    |||| ||||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||    
T  20480593 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccaaataataattttga 20480680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4692414 - 4692488
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  4692414 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcct 4692488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6703875 - 6703948
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  6703875 atcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagcc 6703948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13918519 - 13918446
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  13918519 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagcc 13918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20480240 - 20480167
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  20480240 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 999506 - 999590
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaatattaaatt 85  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||| ||||||| ||||||||||||||||||||| | |||||||    
T  999506 atcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagcctatttttaaatt 999590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32163024 - 32163099
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  32163024 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42611258 - 42611188
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaa 70  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  42611258 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9347199 - 9347126
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  9347199 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20371111 - 20371039
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  20371111 atcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactatagg-gggaaagtgcaattaagcct 20371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26814767 - 26814694
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  26814767 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48105097 - 48105170
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  48105097 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 20371338 - 20371406
Alignment:
Q  6 tcgtttaaaactatgagg-tgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  20371338 tcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21687448 - 21687520
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||| ||||||||    
T  21687448 atcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattatagggggaaaagtgctattaagcc 21687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 50615610 - 50615674
Alignment:
Q  9 tttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  50615610 tttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 50623438 - 50623502
Alignment:
Q  9 tttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  50623438 tttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28633793 - 28633718
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| | |||||||||||||||| ||| |||||||||||||||||||||    
T  28633793 atcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagccta 28633718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 32162797 - 32162734
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagg-aggaaaagtgcaatt 68  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||    
T  32162797 tcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaagaaaaagtgcaatt 32162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 50526453 - 50526524
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaag 71  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||||||||||||    
T  50526453 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50430062 - 50430132
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  50430062 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 999184 - 999115
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| | |||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  999184 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21687098 - 21687025
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| ||||||||||| |||||||| ||||||||| || |||||||||||||||||||    
T  21687098 atcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 47498365 - 47498301
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  47498365 gtttaaaactatgggatgcaaaattgcacaattggcaaactatagg-gggaaagtgcaattaagcc 47498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49318147 - 49318224
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaata 78  Q
    |||| |||||| |||||||| | |||||||| ||||||||||||||||||||| || |||||||||||||||| ||||    
T  49318147 atcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagccaaata 49318224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26815100 - 26815175
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| |||||||||  |||||||| || |||||||||||||||||||||    
T  26815100 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28634138 - 28634213
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || |||||||||||||||| ||||    
T  28634138 atcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 28634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 42611602 - 42611665
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaa 70  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| | |||||||||||||||    
T  42611602 gtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46823916 - 46823846
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| |||||||||||||||  ||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  46823916 atcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48104751 - 48104681
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||    
T  48104751 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49318424 - 49318496
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| | |||||||| |||||||||  |||||||||| |||||| ||||||||||||    
T  49318424 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19007796 - 19007734
Alignment:
Q  12 aaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    ||||||||  || ||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  19007796 aaaactatagggggcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcct 19007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 19008737 - 19008807
Alignment:
Q  7 cgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaa 76  Q
    ||||| |||||||| |||||||||| |||||||||  |||||||||| || ||||||||||||||||||||    
T  19008737 cgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagcctaa 19008807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50429729 - 50429655
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaagcct 74  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||| ||| | | |||||||| |||||||||||    
T  50429729 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcct 50429655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50949234 - 50949164
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagga-ggaaaagtgcaattaa 70  Q
    |||| |||||| |||| |||||||||||||| |||||||||||| ||||||||| |||||||| |||||||    
T  50949234 atcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaa 50949164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44911098 - 44911022
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    |||| |||||| |||| ||| |||||||||| |||||||||||||| |||| || || |||||||||||||||||||    
T  44911098 atcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcctaa 44911022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27172522 - 27172596
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||| ||| | |||||||| |||||||||||||| || | || ||||||||||||||||||||    
T  27172522 atcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcct 27172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 47498497 - 47498547
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagc 72  Q
    |||||||||  ||||||||| ||||||||||| ||||||||||||||||||    
T  47498497 ggtgcaaaaccgcacaattgacaaactatagggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49284482 - 49284408
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||||||||||||    
T  49284482 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 49284408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 17518604 - 17518653
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaag 71  Q
    |||||||||| ||||||||||||||  ||||| |||||||||||||||||    
T  17518604 ggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 13589661 - 13589713
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||||||||| |||||||| |||||  ||||| ||||||||||||||||||||    
T  13589661 ggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 39691987 - 39692055
Alignment:
Q  7 cgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||||||||  ||| |||||||||| ||||||||| |||| |||||| || ||||||||||||||||||    
T  39691987 cgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44911418 - 44911477
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaa 60  Q
    |||| |||||| |||| ||  |||||||||| ||||||||||||||||||||| ||||||    
T  44911418 atcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaa 44911477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50949546 - 50949621
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| |||||| |||| ||||| |||||||| ||||||||| ||||||||| || || |||||||||||| |||||    
T  50949546 atcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgccta 50949621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 50615289 - 50615239
Alignment:
Q  25 gcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    ||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50615239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 50623117 - 50623067
Alignment:
Q  25 gcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    ||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  24 tgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||||||| |||||||| ||||| |||||| || ||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 8108995 - 8109048
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||||||||| ||||||||||||||  ||| || ||||||||||||||||||||    
T  8108995 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44224100 - 44224169
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| | ||||||||  ||||||||| |||||| | | || |||||||||||||    
T  44224100 atcgctcgtttaaaactatgggatgcaaaatcacacaattggtaaactacatggggcaaagtgcaattaa 44224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 47955358 - 47955305
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||||||||| ||||||||||||||  ||| || ||||||||||||||||||||    
T  47955358 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 48190823 - 48190771
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||||||||| ||||||||||||||  ||||| | ||||||||||||||||||    
T  48190823 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 292855 - 292778
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaat 77  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  292855 atcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcctaat 292778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48406034 - 48405961
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  48406034 atcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaagcct 48405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 9023312 - 9023241
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcctaa 76  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  9023312 tcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcctaa 9023241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28196754 - 28196828
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  28196754 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4239347 - 4239420
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  4239347 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28196419 - 28196342
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaat 77  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||| |||| || |||||||||||||||||||||||    
T  28196419 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcctaat 28196342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 32703631 - 32703704
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  32703631 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23539912 - 23539829
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaatattaaatt 85  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||||  ||||||||    
T  23539912 atcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaagtgcaattaagcctataattaaatt 23539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25161951 - 25161879
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  25161951 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39744446 - 39744522
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||    
T  39744446 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctaa 39744522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9380722 - 9380797
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| |||||||||||||||  ||||||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  9380722 atcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 9380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44468904 - 44468978
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||    
T  44468904 atcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaatg-acaattaagcctaa 44468978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 293198 - 293272
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||    
T  293198 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9380380 - 9380307
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| || ||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  9380380 atcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12757839 - 12757770
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||| |||||||    
T  12757839 atcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactatagaaggaaaagtacaattaa 12757770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26207433 - 26207360
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| |||||| |||| ||| |||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  26207433 atcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcct 26207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39086604 - 39086677
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||    
T  39086604 atcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 169087 - 169012
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag--gaaaagtgcaattaagcct 74  Q
    |||| |||||||||| |||| |||||||||| ||||||||||||||||||||| |  |||||||||||||||||||    
T  169087 atcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcct 169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 9023669 - 9023735
Alignment:
Q  9 tttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  9023669 tttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 169420 - 169493
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || |||||| ||||||||||||    
T  169420 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23540233 - 23540306
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||  |||||||||| ||||||||| ||||||||||| | ||||||||||||||||||    
T  23540233 atcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39744103 - 39744026
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaa-gtgcaattaagcctaat 77  Q
    |||| |||||||||| |||| |||| ||||| |||||||||| |||||||||| |||||| |||||||||||||||||    
T  39744103 atcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagcctaat 39744026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 39912473 - 39912550
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaatattaaa 83  Q
    ||||||||||||||| | |||||||| |||||||||  ||||||||| |||||||||| ||||||||| || ||||||    
T  39912473 tcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagaaggaaaagtgtaattaagccaaaaattaaa 39912550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43292110 - 43292038
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| |  ||||||||||||||||    
T  43292110 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26207727 - 26207801
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| |||||| |||| ||| |||||||||| ||||||||||||||||||| || |||||| |||||||||||||    
T  26207727 atcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcct 26207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32703298 - 32703224
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||| | |||||| ||| |||||||||||||| |||| || ||||||||||||||||||||    
T  32703298 atcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 32703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43292338 - 43292411
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||||||| | || |||||| ||||||||||||    
T  43292338 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagcc 43292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 48406366 - 48406435
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||  |||||||||| |||||||||||||| |||||| || ||||| |||||||    
T  48406366 atcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattataggggggaaagtacaattaa 48406435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50678852 - 50678777
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagccta 75  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||||||||||||||||||    
T  50678852 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 12758190 - 12758260
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||||||||||||||  ||||||||   || ||||||||||||||||||  |||||||||||||| |||||    
T  12758190 tcgtttaaaactatggcgtgcaaaaacacataattggcaaactataggaaaaaaagtgcaattaaacctaa 12758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 56505757 - 56505691
Alignment:
Q  10 ttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||||| |||| |||||||||| ||||||||||||||  ||| || |||||||||||||||||||||    
T  56505757 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 3930482 - 3930535
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||||||||| |||||||| |||||  ||||| |||||||||||||||||||||    
T  3930482 ggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccta 3930535  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 11241663 - 11241718
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaat 77  Q
    ||||||||||  |||||||||||||  ||||| |||||||| ||||||||||||||    
T  11241663 ggtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaagcctaat 11241718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 22681881 - 22681935
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagccta 75  Q
    |||||||||||||||||||  ||||  |||||||| |||||||||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagccta 22681935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36095890 - 36095816
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||| |||||||||||||    
T  36095890 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36096456 - 36096526
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaa 70  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||||||||    
T  36096456 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39912126 - 39912053
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagg-aggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| | || ||||| ||||||||   |||||||||| |||||||||||||||||||||    
T  39912126 atcgttcgtttaaaactatg-gatgtaaaatcgcacaattaataaactatagggaggaaaagtgcaattaagcct 39912053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 24775785 - 24775838
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||||||||| ||||||||| ||||  |||||||| ||||||||||||||||||    
T  24775785 ggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcct 24775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50679405 - 50679478
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||  ||| |||||||||| | ||||||||||||  ||||| | ||||||||||||||||||    
T  50679405 atcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 18864391 - 18864457
Alignment:
Q  9 tttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  18864391 tttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13744214 - 13744287
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  13744214 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 13744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37972033 - 37971949
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcctaatattaaat 84  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||| ||||||    
T  37972033 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcctaattttaaat 37971949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 48359392 - 48359320
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  48359392 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10533107 - 10533032
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  10533107 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37889240 - 37889315
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  37889240 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 37889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37972377 - 37972451
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  37972377 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37972451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9035274 - 9035347
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  9035274 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22740572 - 22740641
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  22740572 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37888906 - 37888833
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  37888906 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20418961 - 20418885
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||| |||||    
T  20418961 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacctaa 20418885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 3204735 - 3204669
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  3204735 tcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaagtgcaattaagcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20419305 - 20419379
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  20419305 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 20419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22740229 - 22740155
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  22740229 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 38826899 - 38826968
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| || |||||| |||||||||||||    
T  38826899 tcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcct 38826968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 36527451 - 36527387
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||| | ||||||||||||||    
T  36527451 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42419009 - 42419084
Alignment:
Q  1 atcggtcgtttaaaactatgagg-tgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||| ||||||||||||||| || |||||||  ||||||||||||||||||||| |||||||||||||||| ||||    
T  42419009 atcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaaaccta 42419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3205074 - 3205148
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||| | |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  3205074 atcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 3205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 17157032 - 17156966
Alignment:
Q  9 tttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  17157032 tttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18864040 - 18863970
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||    
T  18864040 atcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 48359639 - 48359713
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||| |||||| |||||||| |||||||||| |||||||||| |||||||||| | ||||||||||||| |||||    
T  48359639 atcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactataggggaaaaagtgcaattatgccta 48359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13741630 - 13741557
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| |||||||||| |||||||| || |||||| ||||||||||||    
T  13741630 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29292995 - 29292921
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| |||||| |||| ||| | |||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  29292995 atcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 29292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9034941 - 9034864
Alignment:
Q  1 atcggtcgtttaaaactatgagg-tgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||||||| || |||| ||| |||||||||||||| |||||| || ||||||||||||||||||||    
T  9034941 atcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcctaa 9034864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 16198967 - 16199032
Alignment:
Q  10 ttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaagcct 74  Q
    ||||||||||| |||||||||| |||||||||||||||||| | | | ||||||||||||||||||    
T  16198967 ttaaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36527779 - 36527852
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagga-ggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| | |||||||| ||| ||||||||||||||| || |||||| ||||||||||||    
T  36527779 atcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaagcc 36527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44599562 - 44599478
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcctaatattaaat 84  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||||||||||| || |||||||    
T  44599562 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaattaaat 44599478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44600116 - 44600190
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | |||||||||||||||||||    
T  44600116 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29293327 - 29293400
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| |||||| |||| |||  ||||||||| ||||||||||||||||||| || |||||| ||||||||||||    
T  29293327 atcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13863386 - 13863310
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcctaa 76  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||| |||||||||||||||    
T  13863386 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctaa 13863310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 9412327 - 9412382
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaa 76  Q
    |||||||||| ||||||||||||||  ||||| || ||||||||||||||||||||    
T  9412327 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctaa 9412382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 23686472 - 23686421
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||||||||||| |||||| |||||  ||||| |||||||||||||||||||    
T  23686472 ggtgcaaaattgtacaattagcaaaagatagggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 8953891 - 8953941
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagc 72  Q
    |||||||||||||||||||  ||||  ||||| ||||||||||||||||||    
T  8953891 ggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13863938 - 13864011
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcct 74  Q
    |||| |||||||||| |||| |||||||| | ||||||||||||||  ||||| | |||||||||||||||||||    
T  13863938 atcgctcgtttaaaaatatggggtgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 18925324 - 18925373
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagc 72  Q
    |||||||||| |||||||| ||||| ||||| |||||||||||||||||||    
T  18925324 ggtgcaaaatcgcacaattagcaaaatatag-aggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42418664 - 42418590
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||  | | |||||| |||||||| |||||||||| || ||||||||| ||||||||||    
T  42418664 atcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaagcct 42418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 18925115 - 18925062
Alignment:
Q  21 aggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||||||||||||||||||| |||||  ||| ||| ||||||||||||||||||    
T  18925115 aggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 3687658 - 3687710
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||||||||| ||||||||||||||  ||| || |||||||||||||||||||    
T  3687658 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8643747 - 8643823
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagg-aggaaaagtgcaattaagcctaa 76  Q
    |||| |||||||| |  ||| |||||||||| |||||||||| |||  ||||| | |||||||||||||||||||||    
T  8643747 atcgctcgtttaataacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcctaa 8643823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 13772693 - 13772637
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactatagg-aggaaaagtgcaattaagcctaat 77  Q
    ||||||||||  ||||||| |||||  ||||| ||||||||||||||||||||||||    
T  13772693 ggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcctaat 13772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 46816292 - 46816368
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaa-gtgcaattaagcctaa 76  Q
    |||| |||||||||| |||| |||||||||| ||| |||||| |||  ||||  |||||| ||||||||||||||||    
T  46816292 atcgctcgtttaaaaatatggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagcctaa 46816368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 185255 - 185328
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  185255 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 184912 - 184840
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatag-gaggaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| |||||||||||||||| ||| |||||||||| |  |||||||||||||||||    
T  184912 atcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaagc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19693 - 19620
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| | |||||| |||||||||||||    
T  19693 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcct 19620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 20031 - 20111
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaagcctaatattaaatttga 88  Q
    ||||||||||||| || ||||||| ||||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||    
T  20031 gtttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcct-atattaaatttga 20111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50146 - 50074
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||    
T  50146 atcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactatagg-gggaaagtgcaattaagcct 50074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 50492 - 50560
Alignment:
Q  6 tcgtttaaaactatgagg-tgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  50492 tcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 50560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 744 - 816
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| |||||||||| |||| |||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  744 atcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagcc 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 403 - 329
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| | |||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  403 atcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38676 - 38750
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||| |||||||| |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  38676 atcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 38750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32733977 - 32734047
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaa 70  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  32733977 atcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 7654534 - 7654603
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcct 74  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||| || ||||||||||||||||||||    
T  7654534 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10087839 - 10087912
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||| | || |||||||||||||||||||    
T  10087839 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 22684346 - 22684411
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||| ||||||||||  |||||||||||||||||| | |||||||||||||||||||    
T  22684346 gtttaaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 22754722 - 22754657
Alignment:
Q  8 gtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||| ||||||||||  |||||||||||||||||| | |||||||||||||||||||    
T  22754722 gtttaaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29074353 - 29074426
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||| || |||| ||||||||||||    
T  29074353 atcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29079117 - 29079190
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||| || |||| ||||||||||||    
T  29079117 atcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29106926 - 29106999
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||| || |||| ||||||||||||    
T  29106926 atcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcct 29106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33974280 - 33974353
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactata-ggaggaaaagtgcaattaagcc 73  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||| || |||||| ||||||||||||    
T  33974280 atcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 403711 - 403651
Alignment:
Q  11 taaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaag 71  Q
    ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||    
T  403711 taaaactatgaggtgcaaaattgcaaaattggcaaactataggaaagaaagtgcaattaag 403651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13177037 - 13177110
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||| |||||||||||||||||||| |||||  |||||||| || |||||||| |||||||||||| |||||||    
T  13177037 atcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactatagggggaaaagtgcaactaagcct 13177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22755070 - 22755142
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggaggaaaagtgcaattaagc 72  Q
    |||| ||||||||||||||| |||||||||| ||| ||||| |||||||| | | ||||||||||||||||||    
T  22755070 atcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33829617 - 33829692
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagccta 75  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||||||||||||||||||    
T  33829617 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 13579653 - 13579707
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaa 76  Q
    |||||||||| |||||||| |||||| |||||  |||||||||||||||||||||    
T  13579653 ggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcctaa 13579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 10039727 - 10039674
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagccta 75  Q
    |||||||||| |||||||| |||||  ||||| |||||||||||||||||||||    
T  10039727 ggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33829063 - 33828990
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||||||||||||||||    
T  33829063 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 3825578 - 3825530
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaa 70  Q
    |||||||||| |||||||| ||||| |||||| ||||||||||||||||    
T  3825578 ggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 2354796 - 2354865
Alignment:
Q  6 tcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||||| |||| ||| |||||||||| ||||||||| ||||||||||  || |||| |||||||||||||    
T  2354796 tcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcct 2354865  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2354481 - 2354409
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||| |||||| |||| ||| | |||||||| | |||||||  |||||||||| |||||| ||||||||||||    
T  2354481 atcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactatagggggaaaaatgcaattaagcc 2354409  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 11656784 - 11656836
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  11656784 ggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 21032030 - 21031978
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    |||||||||| |||||||| |||||   |||| ||||||||||||||||||||    
T  21032030 ggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagcct 21031978  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 30388111 - 30388055
Alignment:
Q  24 tgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaatatt 80  Q
    |||||||| |||||||| |||||  ||||| || |||||||||||||||| ||||||    
T  30388111 tgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagccaaatatt 30388055  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 33655117 - 33655169
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcct 74  Q
    ||||||||||||||||||| |||||  ||| | ||| ||||||||||||||||    
T  33655117 ggtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaagcct 33655169  T

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Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 10311 - 10380
Alignment:
Q  12 aaaactatgaggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaatattaa 82  Q
    ||||||||  |||||||||| | ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  10311 aaaactatagggtgcaaaatcggacaattggcaaactatagg-ggaaaagtgctattaagcctaatattaa 10380  T

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Target: scaffold0029; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9979 - 9904
Alignment:
Q  1 atcggtcgtttaaaactatgagg-tgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcct 74  Q
    |||| ||||||||||||||| || || ||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  9979 atcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 9904  T

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Target: scaffold0110 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 45809 - 45865
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcctaata 78  Q
    |||||||||| ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  45809 ggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagcctaata 45865  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 17158 - 17209
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    ||||||||||||||||||| |||||  ||||| |||||||||||||||||||    
T  17158 ggtgcaaaattgcacaattagcaaaagatagggggaaaagtgcaattaagcc 17209  T

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Target: scaffold0319 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 6699 - 6750
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggaggaaaagtgcaattaagcc 73  Q
    |||||||||| |||||||| |||||  ||||| |||||||||||||||||||    
T  6699 ggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 6750  T

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Target: scaffold0319; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 6446 - 6386
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcctaatatta 81  Q
    |||||||||| |||||||| |||||  ||||| || |||||||||||||||||| ||||||    
T  6446 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccttatatta 6386  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6776 - 6849
Alignment:
Q  1 atcggtcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggag-gaaaagtgcaattaagcc 73  Q
    |||| ||||||||||  ||| |||||||||| ||||||||||||||  ||||| | ||||| ||||||||||||    
T  6776 atcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

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Target: scaffold0802 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 1422 - 1474
Alignment:
Q  22 ggtgcaaaattgcacaattggcaaactataggagg-aaaagtgcaattaagcc 73  Q
    |||||||||| ||||||||||||||  ||||| || |||||||||||||||||    
T  1422 ggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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