View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16378_low_81 (Length: 279)

Name: NF16378_low_81
Description: NF16378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16378_low_81
NF16378_low_81
[»] chr6 (76 HSPs)
chr6 (6-122)||(25096552-25096668)
chr6 (179-262)||(12696331-12696414)
chr6 (212-269)||(7265595-7265652)
chr6 (201-262)||(9025485-9025546)
chr6 (212-269)||(20518345-20518402)
chr6 (179-259)||(9024145-9024225)
chr6 (206-261)||(29049893-29049946)
chr6 (214-261)||(7569172-7569219)
chr6 (218-268)||(19040353-19040403)
chr6 (219-268)||(1532241-1532290)
chr6 (181-262)||(3398626-3398706)
chr6 (201-262)||(7086802-7086863)
chr6 (212-269)||(7151412-7151469)
chr6 (210-259)||(13364705-13364754)
chr6 (205-262)||(20576628-20576685)
chr6 (220-268)||(13360382-13360430)
chr6 (212-268)||(14721242-14721298)
chr6 (205-261)||(15443703-15443759)
chr6 (212-268)||(32511668-32511724)
chr6 (204-267)||(7248360-7248423)
chr6 (201-268)||(9027179-9027246)
chr6 (207-262)||(9195751-9195806)
chr6 (194-269)||(10770658-10770733)
chr6 (218-269)||(30866152-30866203)
chr6 (218-261)||(34446573-34446616)
chr6 (218-268)||(10842533-10842583)
chr6 (218-268)||(13851737-13851787)
chr6 (184-262)||(24138433-24138511)
chr6 (212-262)||(26178683-26178733)
chr6 (204-262)||(26562696-26562754)
chr6 (204-262)||(34073341-34073399)
chr6 (212-261)||(9617442-9617491)
chr6 (211-268)||(9658880-9658937)
chr6 (179-268)||(17327624-17327713)
chr6 (212-261)||(33340947-33340996)
chr6 (218-271)||(34895042-34895095)
chr6 (212-261)||(35125102-35125151)
chr6 (212-268)||(7377980-7378036)
chr6 (212-260)||(9629392-9629440)
chr6 (212-268)||(19044465-19044521)
chr6 (233-268)||(322520-322555)
chr6 (227-262)||(7977847-7977882)
chr6 (205-268)||(10888969-10889032)
chr6 (218-257)||(11591878-11591917)
chr6 (218-261)||(12235527-12235570)
chr6 (207-261)||(28862129-28862184)
chr6 (212-262)||(7996380-7996430)
chr6 (212-262)||(8022371-8022421)
chr6 (201-262)||(8805565-8805624)
chr6 (204-262)||(8931596-8931654)
chr6 (204-262)||(9522898-9522956)
chr6 (204-262)||(16766704-16766762)
chr6 (223-261)||(19602194-19602232)
chr6 (212-262)||(21924937-21924987)
chr6 (227-261)||(25038088-25038122)
chr6 (227-261)||(31579242-31579276)
chr6 (212-266)||(33419176-33419230)
chr6 (222-268)||(33817950-33817996)
chr6 (216-261)||(5462694-5462739)
chr6 (212-261)||(5732512-5732561)
chr6 (216-261)||(6349743-6349788)
chr6 (183-255)||(7942269-7942342)
chr6 (227-268)||(11800889-11800929)
chr6 (205-262)||(17435206-17435263)
chr6 (202-259)||(19312746-19312803)
chr6 (227-268)||(25096424-25096465)
chr6 (212-269)||(32298609-32298666)
chr6 (227-268)||(34595135-34595176)
chr6 (212-256)||(4420181-4420225)
chr6 (205-257)||(8590807-8590859)
chr6 (212-268)||(8776975-8777031)
chr6 (218-258)||(10157995-10158035)
chr6 (218-262)||(12627585-12627629)
chr6 (212-268)||(20371112-20371168)
chr6 (209-261)||(29711270-29711322)
chr6 (227-263)||(31384926-31384962)
[»] chr1 (68 HSPs)
chr1 (179-262)||(1486678-1486761)
chr1 (206-269)||(6427350-6427413)
chr1 (201-268)||(20157341-20157408)
chr1 (207-268)||(10572586-10572647)
chr1 (204-268)||(25361887-25361951)
chr1 (210-261)||(1864880-1864931)
chr1 (218-269)||(10233253-10233304)
chr1 (206-269)||(36905997-36906060)
chr1 (204-259)||(44482240-44482295)
chr1 (218-264)||(7918219-7918265)
chr1 (206-268)||(9828045-9828107)
chr1 (218-268)||(17831539-17831589)
chr1 (204-262)||(21038090-21038148)
chr1 (204-265)||(12713321-12713382)
chr1 (204-265)||(12717412-12717473)
chr1 (212-261)||(28674808-28674857)
chr1 (227-268)||(34298437-34298478)
chr1 (201-262)||(34712374-34712435)
chr1 (204-269)||(40285648-40285713)
chr1 (220-268)||(14332652-14332700)
chr1 (204-268)||(17754312-17754376)
chr1 (212-268)||(36878462-36878518)
chr1 (190-268)||(38503321-38503403)
chr1 (213-261)||(42325568-42325616)
chr1 (234-268)||(609482-609516)
chr1 (212-262)||(13436465-13436515)
chr1 (218-268)||(25098563-25098613)
chr1 (218-268)||(26238121-26238170)
chr1 (212-262)||(27471568-27471618)
chr1 (212-262)||(38075972-38076022)
chr1 (220-262)||(40181878-40181920)
chr1 (203-261)||(44296488-44296545)
chr1 (212-257)||(23636051-23636096)
chr1 (207-268)||(34371715-34371775)
chr1 (227-268)||(41877487-41877528)
chr1 (216-261)||(42004953-42004998)
chr1 (205-261)||(6612166-6612222)
chr1 (212-268)||(9709821-9709877)
chr1 (219-259)||(19324572-19324612)
chr1 (179-262)||(19562589-19562673)
chr1 (218-262)||(30847728-30847772)
chr1 (210-261)||(373055-373106)
chr1 (218-269)||(2445870-2445921)
chr1 (229-268)||(2896140-2896179)
chr1 (205-268)||(5376495-5376558)
chr1 (227-262)||(12443477-12443512)
chr1 (227-262)||(18190125-18190160)
chr1 (211-262)||(23738685-23738736)
chr1 (227-262)||(31015050-31015085)
chr1 (227-262)||(37055873-37055908)
chr1 (218-268)||(398773-398823)
chr1 (204-262)||(8010281-8010339)
chr1 (212-262)||(16927187-16927237)
chr1 (179-261)||(19637776-19637853)
chr1 (206-268)||(24577182-24577244)
chr1 (205-262)||(113306-113363)
chr1 (231-268)||(2851022-2851059)
chr1 (224-261)||(3921675-3921712)
chr1 (204-265)||(12707867-12707928)
chr1 (212-261)||(41017406-41017455)
chr1 (212-268)||(5898268-5898324)
chr1 (218-258)||(12611977-12612017)
chr1 (224-268)||(16812544-16812588)
chr1 (229-269)||(19909297-19909337)
chr1 (210-262)||(21378585-21378637)
chr1 (234-262)||(22947746-22947774)
chr1 (212-268)||(43492496-43492552)
chr1 (218-262)||(49872844-49872888)
[»] chr3 (62 HSPs)
chr3 (179-269)||(8039798-8039894)
chr3 (179-266)||(29508447-29508535)
chr3 (204-261)||(16192744-16192801)
chr3 (212-261)||(20691327-20691376)
chr3 (201-262)||(25948878-25948939)
chr3 (182-267)||(5441005-5441088)
chr3 (207-269)||(17005616-17005678)
chr3 (205-262)||(11313795-11313852)
chr3 (212-268)||(7928451-7928507)
chr3 (204-268)||(9800041-9800105)
chr3 (220-268)||(12704008-12704056)
chr3 (182-262)||(45451560-45451635)
chr3 (221-268)||(11493372-11493419)
chr3 (218-261)||(52369783-52369826)
chr3 (179-249)||(40993309-40993374)
chr3 (227-268)||(4990984-4991025)
chr3 (179-268)||(10954953-10955037)
chr3 (212-261)||(40150573-40150622)
chr3 (212-268)||(8383258-8383314)
chr3 (225-261)||(21149075-21149111)
chr3 (218-262)||(49505162-49505206)
chr3 (218-261)||(1830351-1830394)
chr3 (218-261)||(3730173-3730216)
chr3 (212-259)||(8789552-8789599)
chr3 (209-268)||(10690261-10690320)
chr3 (206-261)||(11093578-11093633)
chr3 (236-271)||(11143235-11143270)
chr3 (227-262)||(11251985-11252020)
chr3 (207-258)||(15314873-15314924)
chr3 (209-268)||(21478684-21478743)
chr3 (179-262)||(27505253-27505336)
chr3 (218-261)||(32804548-32804591)
chr3 (219-253)||(4704301-4704335)
chr3 (204-262)||(4987285-4987343)
chr3 (227-269)||(14840308-14840350)
chr3 (227-261)||(21211296-21211330)
chr3 (223-261)||(25074797-25074835)
chr3 (222-268)||(29112292-29112338)
chr3 (218-268)||(34307788-34307838)
chr3 (212-268)||(2620057-2620111)
chr3 (204-261)||(2731820-2731877)
chr3 (227-268)||(3618882-3618923)
chr3 (212-261)||(4201404-4201453)
chr3 (212-257)||(6780421-6780466)
chr3 (206-259)||(8039216-8039269)
chr3 (221-262)||(9624648-9624689)
chr3 (227-264)||(12083908-12083945)
chr3 (212-261)||(13799512-13799561)
chr3 (219-268)||(14618782-14618831)
chr3 (228-261)||(16789668-16789701)
chr3 (227-268)||(17568700-17568741)
chr3 (179-260)||(20503474-20503550)
chr3 (204-261)||(23184066-23184123)
chr3 (235-268)||(24633767-24633800)
chr3 (212-261)||(25093510-25093559)
chr3 (201-261)||(27513653-27513714)
chr3 (179-262)||(28918008-28918088)
chr3 (227-268)||(34910318-34910359)
chr3 (212-268)||(18426950-18427006)
chr3 (210-258)||(23271994-23272042)
chr3 (207-251)||(29386508-29386552)
chr3 (202-262)||(49651778-49651838)
[»] chr5 (55 HSPs)
chr5 (205-268)||(15410443-15410506)
chr5 (179-271)||(30502362-30502449)
chr5 (179-271)||(30542705-30542792)
chr5 (201-261)||(38749554-38749614)
chr5 (190-262)||(43001807-43001879)
chr5 (199-262)||(6471878-6471941)
chr5 (179-262)||(39205887-39205970)
chr5 (207-268)||(36838544-36838605)
chr5 (206-268)||(3966504-3966566)
chr5 (211-261)||(19737483-19737533)
chr5 (212-261)||(2548395-2548444)
chr5 (227-268)||(27932236-27932277)
chr5 (212-261)||(28296336-28296385)
chr5 (206-262)||(17593718-17593774)
chr5 (185-261)||(23015964-23016040)
chr5 (218-269)||(12264837-12264888)
chr5 (217-268)||(19293430-19293481)
chr5 (179-262)||(31084330-31084413)
chr5 (218-261)||(31264446-31264489)
chr5 (201-268)||(38806839-38806906)
chr5 (210-268)||(23220984-23221042)
chr5 (224-261)||(2419865-2419902)
chr5 (220-261)||(2577190-2577231)
chr5 (212-261)||(28588676-28588725)
chr5 (221-266)||(35017040-35017085)
chr5 (201-258)||(43208265-43208322)
chr5 (179-259)||(14873527-14873607)
chr5 (179-259)||(18421815-18421890)
chr5 (204-268)||(18592074-18592138)
chr5 (224-264)||(21194219-21194259)
chr5 (204-268)||(22423806-22423870)
chr5 (204-268)||(32766937-32767001)
chr5 (205-261)||(40211964-40212020)
chr5 (218-262)||(41091265-41091309)
chr5 (227-258)||(6326314-6326345)
chr5 (218-261)||(18607105-18607148)
chr5 (179-262)||(23012382-23012460)
chr5 (219-258)||(24273039-24273078)
chr5 (219-258)||(24389136-24389175)
chr5 (218-261)||(32630743-32630786)
chr5 (212-262)||(16203797-16203847)
chr5 (218-268)||(19168829-19168879)
chr5 (180-258)||(21194098-21194171)
chr5 (218-268)||(27144464-27144514)
chr5 (219-261)||(41600906-41600948)
chr5 (224-261)||(4344750-4344787)
chr5 (224-261)||(11596469-11596506)
chr5 (235-268)||(19746717-19746750)
chr5 (218-255)||(26205768-26205805)
chr5 (218-267)||(34879352-34879401)
chr5 (204-268)||(6035484-6035547)
chr5 (228-268)||(9449470-9449510)
chr5 (212-268)||(11685940-11685996)
chr5 (227-259)||(19438353-19438385)
chr5 (201-257)||(41558645-41558701)
[»] chr4 (57 HSPs)
chr4 (179-269)||(36635324-36635415)
chr4 (201-261)||(18513232-18513292)
chr4 (215-260)||(46180941-46180986)
chr4 (202-262)||(15659752-15659812)
chr4 (204-261)||(7012074-7012131)
chr4 (216-261)||(20743284-20743329)
chr4 (212-261)||(40783965-40784014)
chr4 (212-268)||(5775360-5775416)
chr4 (182-262)||(21945510-21945585)
chr4 (183-262)||(3947739-3947818)
chr4 (212-259)||(18576039-18576086)
chr4 (218-261)||(24343515-24343558)
chr4 (179-262)||(29205451-29205529)
chr4 (218-261)||(31243556-31243599)
chr4 (222-261)||(43299983-43300022)
chr4 (222-261)||(43300624-43300663)
chr4 (218-269)||(55941011-55941062)
chr4 (212-262)||(15029772-15029822)
chr4 (219-261)||(22440609-22440651)
chr4 (212-262)||(33950143-33950193)
chr4 (218-268)||(40613451-40613501)
chr4 (220-261)||(903930-903971)
chr4 (212-269)||(7214524-7214581)
chr4 (227-268)||(8423735-8423776)
chr4 (213-269)||(16189709-16189765)
chr4 (224-268)||(17446072-17446116)
chr4 (212-260)||(30103359-30103406)
chr4 (222-262)||(37698719-37698759)
chr4 (212-268)||(54580025-54580081)
chr4 (218-261)||(5654599-5654642)
chr4 (218-269)||(6933275-6933326)
chr4 (218-261)||(14465302-14465345)
chr4 (204-267)||(30982872-30982935)
chr4 (179-255)||(37496718-37496800)
chr4 (212-262)||(4672087-4672137)
chr4 (223-261)||(10546156-10546194)
chr4 (218-260)||(11110212-11110254)
chr4 (212-261)||(15835640-15835690)
chr4 (218-268)||(22596988-22597038)
chr4 (227-261)||(32910559-32910593)
chr4 (212-266)||(36386213-36386267)
chr4 (204-262)||(51701265-51701323)
chr4 (218-268)||(56488518-56488568)
chr4 (236-269)||(21658840-21658873)
chr4 (215-268)||(30522920-30522973)
chr4 (227-268)||(38148742-38148783)
chr4 (183-268)||(40179614-40179694)
chr4 (204-253)||(46160912-46160961)
chr4 (234-262)||(847958-847986)
chr4 (201-253)||(7970535-7970587)
chr4 (201-261)||(9906782-9906842)
chr4 (220-260)||(9996849-9996889)
chr4 (206-262)||(11596348-11596404)
chr4 (204-268)||(19482669-19482733)
chr4 (228-268)||(24613719-24613759)
chr4 (204-268)||(40742592-40742656)
chr4 (212-260)||(49659525-49659573)
[»] chr8 (48 HSPs)
chr8 (210-268)||(7658464-7658522)
chr8 (207-261)||(11803267-11803321)
chr8 (213-261)||(3508060-3508108)
chr8 (204-268)||(4611535-4611599)
chr8 (179-262)||(12559074-12559158)
chr8 (222-269)||(13203641-13203688)
chr8 (218-268)||(34897086-34897136)
chr8 (212-268)||(4786340-4786396)
chr8 (209-269)||(7442845-7442905)
chr8 (212-268)||(18646173-18646229)
chr8 (208-268)||(22493495-22493555)
chr8 (220-268)||(37225753-37225801)
chr8 (212-263)||(14134705-14134756)
chr8 (205-268)||(14634136-14634199)
chr8 (207-261)||(11927083-11927137)
chr8 (212-262)||(13844598-13844648)
chr8 (223-261)||(14513187-14513225)
chr8 (218-268)||(24362210-24362260)
chr8 (212-261)||(12985400-12985449)
chr8 (213-262)||(31236580-31236629)
chr8 (219-268)||(39954288-39954337)
chr8 (223-268)||(40063952-40063997)
chr8 (218-262)||(3025558-3025602)
chr8 (218-262)||(14731719-14731763)
chr8 (212-268)||(20679397-20679453)
chr8 (221-261)||(29198490-29198530)
chr8 (206-261)||(4122245-4122300)
chr8 (218-261)||(28883886-28883929)
chr8 (207-261)||(11944673-11944727)
chr8 (212-262)||(12606831-12606881)
chr8 (230-268)||(18067954-18067992)
chr8 (227-261)||(24669441-24669475)
chr8 (205-259)||(33389356-33389410)
chr8 (183-261)||(33405362-33405435)
chr8 (228-269)||(14227222-14227263)
chr8 (207-268)||(15816126-15816187)
chr8 (179-268)||(16641943-16642032)
chr8 (235-268)||(27067323-27067356)
chr8 (204-261)||(28819199-28819256)
chr8 (212-261)||(33382021-33382070)
chr8 (220-261)||(34201056-34201097)
chr8 (215-268)||(36934671-36934724)
chr8 (227-260)||(40332200-40332233)
chr8 (227-263)||(4948658-4948694)
chr8 (206-262)||(25172694-25172750)
chr8 (218-258)||(26418350-26418390)
chr8 (228-268)||(29447128-29447168)
chr8 (227-267)||(37283827-37283867)
[»] chr7 (68 HSPs)
chr7 (179-262)||(5409805-5409888)
chr7 (218-268)||(4909152-4909202)
chr7 (204-258)||(17307904-17307958)
chr7 (206-268)||(27945042-27945104)
chr7 (207-268)||(23128658-23128719)
chr7 (201-261)||(5233637-5233697)
chr7 (212-268)||(5835248-5835304)
chr7 (204-268)||(8160417-8160481)
chr7 (204-268)||(15902823-15902887)
chr7 (209-261)||(36314626-36314678)
chr7 (201-268)||(7758323-7758390)
chr7 (183-262)||(21880159-21880233)
chr7 (183-261)||(1433462-1433540)
chr7 (218-268)||(22868043-22868093)
chr7 (180-269)||(32093990-32094080)
chr7 (207-261)||(44172887-44172941)
chr7 (205-262)||(7328686-7328743)
chr7 (181-262)||(13770698-13770779)
chr7 (212-268)||(29787373-29787427)
chr7 (182-268)||(32308121-32308213)
chr7 (179-259)||(9778510-9778590)
chr7 (201-261)||(16341504-16341564)
chr7 (212-268)||(20549792-20549848)
chr7 (201-268)||(5548677-5548744)
chr7 (183-261)||(21138969-21139044)
chr7 (185-268)||(22484026-22484104)
chr7 (205-256)||(22602705-22602756)
chr7 (218-261)||(27732247-27732290)
chr7 (227-262)||(30813819-30813854)
chr7 (218-261)||(38134414-38134457)
chr7 (179-262)||(43027438-43027521)
chr7 (204-262)||(3142072-3142130)
chr7 (218-268)||(6630920-6630970)
chr7 (218-268)||(18013082-18013132)
chr7 (216-258)||(23930230-23930272)
chr7 (203-261)||(31808502-31808560)
chr7 (207-261)||(35297669-35297723)
chr7 (212-261)||(21247738-21247787)
chr7 (227-268)||(28155571-28155612)
chr7 (179-268)||(32287437-32287521)
chr7 (223-259)||(7133291-7133327)
chr7 (212-268)||(7546161-7546217)
chr7 (179-268)||(10042938-10043029)
chr7 (218-262)||(17851438-17851482)
chr7 (212-268)||(19206051-19206107)
chr7 (201-261)||(33384573-33384633)
chr7 (227-262)||(2424621-2424656)
chr7 (212-259)||(9482944-9482991)
chr7 (218-261)||(12278843-12278886)
chr7 (210-261)||(44020983-44021034)
chr7 (212-262)||(3721100-3721150)
chr7 (212-262)||(19992008-19992058)
chr7 (230-260)||(24289829-24289859)
chr7 (204-262)||(24339649-24339707)
chr7 (212-262)||(25481909-25481959)
chr7 (210-268)||(46644687-46644745)
chr7 (212-261)||(2525846-2525895)
chr7 (188-269)||(8046008-8046086)
chr7 (227-268)||(23191897-23191938)
chr7 (204-261)||(26329376-26329433)
chr7 (227-260)||(30731046-30731079)
chr7 (212-261)||(38143231-38143280)
chr7 (212-268)||(8090027-8090083)
chr7 (201-261)||(11890910-11890970)
chr7 (218-258)||(18233606-18233646)
chr7 (212-268)||(26733305-26733361)
chr7 (212-268)||(37742524-37742580)
chr7 (211-255)||(38629965-38630009)
[»] scaffold0036 (1 HSPs)
scaffold0036 (207-265)||(9744-9802)
[»] chr2 (54 HSPs)
chr2 (204-269)||(2665884-2665947)
chr2 (212-262)||(18889593-18889643)
chr2 (218-268)||(21616763-21616813)
chr2 (179-264)||(5367197-5367277)
chr2 (207-268)||(44860321-44860382)
chr2 (185-261)||(30527570-30527646)
chr2 (212-268)||(42832278-42832334)
chr2 (218-261)||(10535767-10535810)
chr2 (204-263)||(12668417-12668476)
chr2 (218-261)||(18570980-18571023)
chr2 (213-268)||(23718027-23718082)
chr2 (213-268)||(24105699-24105754)
chr2 (229-271)||(2331792-2331834)
chr2 (218-268)||(4229416-4229466)
chr2 (227-261)||(23921261-23921295)
chr2 (218-268)||(29970557-29970607)
chr2 (218-268)||(37411252-37411302)
chr2 (212-261)||(2415325-2415374)
chr2 (216-261)||(12748692-12748737)
chr2 (206-263)||(18622612-18622669)
chr2 (179-268)||(18840987-18841071)
chr2 (211-268)||(28121550-28121607)
chr2 (212-261)||(34006993-34007042)
chr2 (220-261)||(36281693-36281734)
chr2 (227-268)||(39323265-39323306)
chr2 (212-261)||(40361756-40361805)
chr2 (179-248)||(41843462-41843531)
chr2 (219-255)||(15909641-15909677)
chr2 (212-268)||(18276522-18276578)
chr2 (206-262)||(18420430-18420486)
chr2 (217-261)||(19613620-19613664)
chr2 (227-267)||(25846743-25846783)
chr2 (220-268)||(28677910-28677958)
chr2 (220-259)||(17520080-17520119)
chr2 (227-262)||(21374716-21374751)
chr2 (227-262)||(21782835-21782870)
chr2 (218-261)||(24011044-24011087)
chr2 (218-261)||(25544489-25544532)
chr2 (218-261)||(35449521-35449564)
chr2 (210-261)||(39279683-39279734)
chr2 (201-260)||(44776608-44776667)
chr2 (218-268)||(31808078-31808128)
chr2 (212-262)||(34691807-34691857)
chr2 (212-262)||(34714219-34714269)
chr2 (211-261)||(44605140-44605190)
chr2 (210-255)||(8300219-8300264)
chr2 (218-259)||(11308012-11308053)
chr2 (212-261)||(22085012-22085061)
chr2 (212-261)||(31026703-31026752)
chr2 (207-268)||(36756341-36756402)
chr2 (212-257)||(45000848-45000893)
chr2 (218-262)||(896218-896262)
chr2 (212-268)||(20242729-20242785)
chr2 (212-256)||(38355889-38355933)
[»] scaffold0020 (2 HSPs)
scaffold0020 (201-262)||(135303-135364)
scaffold0020 (206-260)||(137789-137843)
[»] scaffold0004 (1 HSPs)
scaffold0004 (227-268)||(92808-92849)
[»] scaffold1528 (1 HSPs)
scaffold1528 (204-268)||(1036-1100)
[»] scaffold0123 (1 HSPs)
scaffold0123 (204-268)||(44519-44583)
[»] scaffold0044 (1 HSPs)
scaffold0044 (179-260)||(53189-53276)
[»] scaffold0022 (2 HSPs)
scaffold0022 (206-261)||(99901-99956)
scaffold0022 (222-269)||(90843-90890)
[»] scaffold0049 (2 HSPs)
scaffold0049 (231-269)||(63773-63811)
scaffold0049 (204-259)||(56932-56987)
[»] scaffold0024 (1 HSPs)
scaffold0024 (201-255)||(18099-18153)
[»] scaffold0110 (1 HSPs)
scaffold0110 (200-261)||(28858-28919)
[»] scaffold0011 (1 HSPs)
scaffold0011 (212-261)||(240023-240072)
[»] scaffold0171 (1 HSPs)
scaffold0171 (193-249)||(23440-23496)
[»] scaffold0598 (1 HSPs)
scaffold0598 (223-261)||(8066-8104)
[»] scaffold0376 (1 HSPs)
scaffold0376 (212-262)||(6319-6369)
[»] scaffold0320 (1 HSPs)
scaffold0320 (211-261)||(17037-17087)
[»] scaffold0085 (1 HSPs)
scaffold0085 (234-268)||(26394-26428)
[»] scaffold0050 (1 HSPs)
scaffold0050 (183-261)||(70286-70359)
[»] scaffold0018 (1 HSPs)
scaffold0018 (227-261)||(192266-192300)
[»] scaffold0008 (1 HSPs)
scaffold0008 (204-262)||(263366-263424)
[»] scaffold0361 (1 HSPs)
scaffold0361 (227-268)||(14531-14572)
[»] scaffold0306 (1 HSPs)
scaffold0306 (231-268)||(13401-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (231-268)||(21889-21926)


Alignment Details
Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 25096668 - 25096552
Alignment:
Q  6 gacatcatcaaatccagcattctcaagcatctgtgaatgatttagaatattagtatcatatcatgtaatagaaattaattcaaaaatgtttcaaatcaaa 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||    
T  25096668 gacatcatcaaatccagcattctcaagcatctgtgaatcatttacaatattagtagcatatcttgtaattgaaataaattcaaaaatgtttcaaatcaaa 25096569  T
Q  106 agttatattgaataact 122  Q
    |||||||||||||||||    
T  25096568 agttatattgaataact 25096552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 12696414 - 12696331
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||| |||| ||||| |||||||||| ||||  |||| | | ||||||||||||||||||||||| ||||||||||||    
T  12696414 tcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattag 12696331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 7265595 - 7265652
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  7265595 acaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgtt 7265652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 9025485 - 9025546
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  9025485 tgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 20518402 - 20518345
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||||    
T  20518402 acaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgtt 20518345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 9024145 - 9024225
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||||| ||| ||||  | |||||||||| ||||  ||||||||||||||| |||||||||| |||||||||||||||    
T  9024145 tcccggtgttggatatgtcccgtgtccgacacgacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 29049946 - 29049893
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  29049946 gacacaacaccaacacat--gattacattgaattatgtaattttctcaaattatta 29049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 7569172 - 7569219
Alignment:
Q  214 accaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  7569172 accaacacctataattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 19040403 - 19040353
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  19040403 acacatataattacactgaattatgtgattttctcaaattattagcggtgt 19040353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 1532290 - 1532241
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 3398706 - 3398626
Alignment:
Q  181 ccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||||| ||||| |||| ||||| | || ||| ||||||||||||||| | ||||| ||||||||||||    
T  3398706 ccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgatttt-tcaaattattag 3398626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 7086863 - 7086802
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  7086863 tgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattag 7086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 7151469 - 7151412
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||||    
T  7151469 acaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgtt 7151412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 13364705 - 13364754
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  13364705 caacaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 20576628 - 20576685
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||| |||||||||| ||| |||||||||||||||| ||||||||| |||||||||    
T  20576628 cgacacgacaccaacacttataattacactgaattatgcaattttctcgaattattag 20576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 13360382 - 13360430
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  13360382 acatataattacactgaattatgtgattttctcaaattactagtggtgt 13360430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 14721298 - 14721242
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||| |||| | |||||||||||||||||| ||||||||| ||||||    
T  14721298 acaccaacacatataattatagtgaattatgtaattttcttaaattattaatggtgt 14721242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 15443759 - 15443703
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||| |||| |||| | |||||||||| |||||||||||||||||    
T  15443759 cgacacaacaccaacatatataattatattgaattatgttattttctcaaattatta 15443703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 32511668 - 32511724
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| ||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  32511668 acaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 7248423 - 7248360
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtg 267  Q
    ||||||| || ||||||||||| ||||| ||||||||||| |||| |||| |||||||||||||    
T  7248423 ccgacacgactccaacacatataattaccctgaattatgtgatttcctcagattattagtggtg 7248360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 9027246 - 9027179
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| ||||| |||||||| ||||||| ||||||||| ||| |||||||||||||| |||||    
T  9027246 tgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgt 9027179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 9195751 - 9195806
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 10770658 - 10770733
Alignment:
Q  194 tgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||| |||| ||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||| |||||    
T  10770658 tgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtt 10770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 30866152 - 30866203
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||| |||||| |||||||||| |||||||||||||||||| ||||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgtt 30866203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 34446616 - 34446573
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  34446616 acacctatgattacactgaattatgtcattttctcaaattatta 34446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 10842583 - 10842533
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  10842583 acacatatgattacactaaattatgtgattttttcaaattattagcggtgt 10842533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 13851787 - 13851737
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| |||||||||||||| || |||||||||||||||||| |||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgt 13851737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 24138511 - 24138433
Alignment:
Q  184 gtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||| ||||||||||| |||||||||| | |||||| | |||||| |||||| | ||||| ||||||||||||    
T  24138511 gtgtcagacacgtgtcatgtccaacacaacaccgatacatataaatacacttaattatatgattttttcaaattattag 24138433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 26562754 - 26562696
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| ||| | |||||||| ||||||||||||||||| ||||||||||||| ||||    
T  26562754 ccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttag 26562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 34073341 - 34073399
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| ||||| || ||||| ||||||||||||||||  ||||||||||||||||||    
T  34073341 ccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattag 34073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 9617491 - 9617442
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||||||||    
T  9617491 acaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 9658937 - 9658880
Alignment:
Q  211 aacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| ||| |||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  9658937 aacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgt 9658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 17327624 - 17327713
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| |||| ||||| |||||||||| ||||  ||||||||  ||||||| |||||||| ||||||||||| | ||||| ||||    
T  17327624 tccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgattttctcaaaatcttagttgtgt 17327713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 33340947 - 33340996
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  33340947 acaccaacacatatgattccattgagttatgtgattttctcaaattatta 33340996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 34895042 - 34895095
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgtttg 271  Q
    |||| ||||||||||||||||| | |||||||||||||||||||  ||||||||    
T  34895042 acacctatgattacactgaattgtataattttctcaaattattataggtgtttg 34895095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 35125151 - 35125102
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||| || ||| |||||| |||||||||||||||||    
T  35125151 acaccaacacatatgattccattgagttatgtgattttctcaaattatta 35125102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 7378036 - 7377980
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||| |||| |||||    
T  7378036 acaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgt 7377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 9629440 - 9629392
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||||||    
T  9629440 acaccgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 19044521 - 19044465
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| || |||||||||||||| || |||||||||||||||| ||||    
T  19044521 acaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgt 19044465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 268
Target Start/End: Complemental strand, 322555 - 322520
Alignment:
Q  233 ctgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||| ||||||||||||||||    
T  322555 ctgaattatgtaattttcttaaattattagtggtgt 322520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 7977847 - 7977882
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||||||||| ||||||||||||    
T  7977847 attacactgaattatgtaattttttcaaattattag 7977882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 10888969 - 10889032
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| |||| ||||||||| || ||||| |||||||| ||||| |||||||||||| |||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgt 10889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 11591878 - 11591917
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaatt 257  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  11591878 acacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 12235527 - 12235570
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||    
T  12235527 acacctatgattacactgaattatgtcattttctctaattatta 12235570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 28862184 - 28862129
Alignment:
Q  207 acacaacaccaacacatatgattacactgaatt-atgtaattttctcaaattatta 261  Q
    |||| ||||| |||||||||||||||||||||| |||| ||||| |||||||||||    
T  28862184 acacgacaccgacacatatgattacactgaattaatgtcattttatcaaattatta 28862129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 7996380 - 7996430
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| || ||||| ||||||||||||||| | ||||||||||||||||||    
T  7996380 acaccgacgcatataattacactgaattatatgattttctcaaattattag 7996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 8022421 - 8022371
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| || ||||| ||||||||||||||| | ||||||||||||||||||    
T  8022421 acaccgacgcatataattacactgaattatatgattttctcaaattattag 8022371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 8805565 - 8805624
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||||| ||||| |||||||  |||||||| |||||||| ||||||||||||||||||    
T  8805565 tgtctgacactacaccgacacata--attacactaaattatgtgattttctcaaattattag 8805624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 8931596 - 8931654
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| ||| | |||||||| |||| |||||||||||| ||||||||||||| ||||    
T  8931596 ccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttag 8931654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 9522956 - 9522898
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||| |||| | | ||||||||||||||||| ||||| | ||||||||||    
T  9522956 ccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 16766762 - 16766704
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  16766762 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 16766704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 19602194 - 19602232
Alignment:
Q  223 tatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  19602194 tatgattacactgaattatatcattttctcaaattatta 19602232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 21924937 - 21924987
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| ||||||||||||||| | || |||||||||||||||    
T  21924937 acaccgacacatataattacactgaattatttgatattctcaaattattag 21924987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 25038088 - 25038122
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| ||||||||||||||||||||||||||    
T  25038088 attacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 31579242 - 31579276
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||||| |||||||||||||||||    
T  31579242 attacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 33419230 - 33419176
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggt 266  Q
    |||||||||||||| |||||| |||||||| | | ||| ||||||||||||||||    
T  33419230 acaccaacacatataattacattgaattatatcaatttttcaaattattagtggt 33419176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 33817996 - 33817950
Alignment:
Q  222 atatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| |||||||||||||||| ||||||||| ||||||||| |||||    
T  33817996 atataattacactgaattatgaaattttctccaattattagcggtgt 33817950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 5462739 - 5462694
Alignment:
Q  216 caacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||| |||||| |||||||||| |||||||||||||||||    
T  5462739 caacatatataattacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 5732512 - 5732561
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||| |||||||| || ||||| |||||||||||||||||    
T  5732512 acaccgacacatataattacactaaaatatgtgattttctcaaattatta 5732561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 6349743 - 6349788
Alignment:
Q  216 caacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| | |||||| |||||||||||||||| |||||||||||    
T  6349743 caacacatgtaattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 7942342 - 7942269
Alignment:
Q  183 ggtgtcggacatgtgtca-tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaa 255  Q
    |||||| |||| |||||| ||||||||||| |||  |||||| |||||||| |||||||||| ||| |||||||    
T  7942342 ggtgtccgacacgtgtcagtgtccgacacagcactgacacatgtgattacattgaattatgtcattgtctcaaa 7942269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 11800929 - 11800889
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  11800929 attacact-aattatgtaattttctcaaattattaatggtgt 11800889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 17435263 - 17435206
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||| ||||| | | ||||||||||||||||||||||| | ||||||||||    
T  17435263 cgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattag 17435206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 19312803 - 19312746
Alignment:
Q  202 gtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||||| ||||||||||| ||||||||  |||||| ||||||||| | |||||||    
T  19312803 gtccgacacgacaccaacacacatgattactttgaattttgtaattttttaaaattat 19312746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 25096465 - 25096424
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||  ||||||| ||||||||||||||||||||||||    
T  25096465 attacactagattatgtgattttctcaaattattagtggtgt 25096424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 32298609 - 32298666
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||||||| |||||||| |||||||| ||  ||| |||||||||| ||||||    
T  32298609 acaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgtt 32298666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 34595176 - 34595135
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  34595176 attacactgaattatgtgattttttcaaattattagttgtgt 34595135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 4420181 - 4420225
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaat 256  Q
    |||||||||| |||| |||||||||||||| | ||||||||||||    
T  4420181 acaccaacacctatggttacactgaattatatcattttctcaaat 4420225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 8590807 - 8590859
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatt 257  Q
    |||||| ||| | |||||||||||||||| ||| || ||||||||||||||||    
T  8590807 cgacacgacaacgacacatatgattacaccgaaatacgtaattttctcaaatt 8590859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 8776975 - 8777031
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| | | ||||||||||||| ||| ||||| ||||||||||||| ||||    
T  8776975 acaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgt 8777031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 10158035 - 10157995
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaatta 258  Q
    |||||| |||||||| |||||||||| ||||||||||||||    
T  10158035 acacatgtgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 12627585 - 12627629
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||| ||||||||||||||||| ||||| ||| ||||||||    
T  12627585 acacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 20371112 - 20371168
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| || ||| ||| |||||| |||||||||||||||||| |||||    
T  20371112 acaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgt 20371168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 29711322 - 29711270
Alignment:
Q  209 acaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| |||||| || ||| | |||||||||| |||||||||||||||||    
T  29711322 acaacaccgacacatgtggttataatgaattatgtcattttctcaaattatta 29711270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 31384962 - 31384926
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagt 263  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  31384962 attacactgaattatgtgattttttcaaattattagt 31384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 1486678 - 1486761
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| ||| ||||||||||||||||| ||||| ||||||||||||    
T  1486678 tcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattag 1486761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 6427413 - 6427350
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||||||||||||| ||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgtt 6427350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 20157341 - 20157408
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| ||||| |||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  20157341 tgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgt 20157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 10572586 - 10572647
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| |||||| | ||||||| ||||||||| ||||||||||||||||||||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgt 10572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 25361951 - 25361887
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||  |||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  25361951 ccgacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgt 25361887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 1864880 - 1864931
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  1864880 caacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 10233304 - 10233253
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  10233304 acacatataattacactgaattatgtgattttctcaatttattagtggtgtt 10233253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 36906060 - 36905997
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||| ||||||    
T  36906060 gacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgtt 36905997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 44482295 - 44482240
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  44482295 ccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 7918219 - 7918265
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtg 264  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  7918219 acacatataattacactgaattatgtgattttctcaaattattagtg 7918265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 9828107 - 9828045
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||| |||||||  ||||||||||||||||| ||||| ||||||||||||||||||    
T  9828107 gacacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgt 9828045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 17831539 - 17831589
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||    
T  17831539 acacatatgattacactgaataatgtgattttctcaaattattagcggtgt 17831589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 21038148 - 21038090
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| ||||  || ||||||||||||||||||||||||||||||| ||||||||||    
T  21038148 ccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattag 21038090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 12713321 - 12713382
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 265  Q
    |||||| |||||||| |||||| |||||||| |||||||| ||||||| |||||||||||||    
T  12713321 ccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattagtgg 12713382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 12717412 - 12717473
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 265  Q
    |||||| |||||||| |||||| |||||||| |||||||| ||||||| |||||||||||||    
T  12717412 ccgacataacaccaatacatataattacactaaattatgtgattttcttaaattattagtgg 12717473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 28674857 - 28674808
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  28674857 acaccaacatatataattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 34298478 - 34298437
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  34298478 attacactgaattatgtgattttctcaaattattagtggtgt 34298437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 34712374 - 34712435
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||| ||||  |||||||| |||||||| |||||||| ||||||||||||||||||    
T  34712374 tgtccgacacgacactgacacatataattacactaaattatgttattttctcaaattattag 34712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 40285648 - 40285713
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||||| ||| | |||||||||| ||||||||||||||  |||||||||||||||||| ||||||    
T  40285648 ccgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgtt 40285713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 14332652 - 14332700
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 17754376 - 17754312
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||  ||||||||  |||||||||||||||||||||| |||||||||||| |||||    
T  17754376 ccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgt 17754312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 36878518 - 36878462
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||| ||| ||||||||||||||||| |||||||||||||||||| |||||    
T  36878518 acaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgt 36878462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 38503403 - 38503321
Alignment:
Q  190 gacatgtgtcatgtccgac--aca--acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||  |||  ||||| |||||||| ||||||||||| ||| | |||||||||||||||||| |||||    
T  38503403 gacatgtgtcatgtccgaccgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgt 38503321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 42325616 - 42325568
Alignment:
Q  213 caccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||  |||||||||||||||| |||||||||||||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattatta 42325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 268
Target Start/End: Original strand, 609482 - 609516
Alignment:
Q  234 tgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||||||||||||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgt 609516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 13436515 - 13436465
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||||||| ||||||||||||||||| |||| || ||||||||||    
T  13436515 acaccaacacatataattacactgaattatgtgatttccttaaattattag 13436465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 25098563 - 25098613
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| ||||||||||||||| || |||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgt 25098613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 26238121 - 26238170
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  26238121 acacatat-attacactgaattatgttattttctcaaattattagcggtgt 26238170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 27471568 - 27471618
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||||| | |||||||||||||||||  |||||||||||||||||    
T  27471568 acaccaacacatgtaattacactgaattatgtgcttttctcaaattattag 27471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 38075972 - 38076022
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||||||||||||||||| |||||| |||| |||||||||||||    
T  38075972 acaccgacacatatgattacactgacttatgtgatttactcaaattattag 38076022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 40181920 - 40181878
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 44296488 - 44296545
Alignment:
Q  203 tccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| ||||| ||||||||||||| ||| |||||||| |||||||||||||||||    
T  44296488 tccgacacgacaccgacacatatgatta-actaaattatgtcattttctcaaattatta 44296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 23636051 - 23636096
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaatt 257  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||    
T  23636051 acaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 34371775 - 34371715
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| |||||||| ||||||||||||||||| |||||||| ||||||||| |||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgt 34371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 41877487 - 41877528
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  41877487 attacactaaattatgtaattttctcaaattattagcggtgt 41877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 42004953 - 42004998
Alignment:
Q  216 caacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| |||||||||||| |||||||| |||||||||||||||||    
T  42004953 caacacctatgattacactaaattatgtcattttctcaaattatta 42004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 6612166 - 6612222
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| ||||| |||| | | ||||||||||||||||||||||| |||||||||||    
T  6612166 cgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 9709877 - 9709821
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| ||||||  ||||||||| |||||||||||||||||| |||||    
T  9709877 acaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 19562589 - 19562673
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacaca-acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| |||||||||| ||||  | ||||||||  ||||| |||||||| ||||||||||| ||||  ||||||||||||||||||    
T  19562589 tccctgtgtcggacacgtgttgtatccgacactgacacctacacatataattacactgaactatgagattttctcaaattattag 19562673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 30847728 - 30847772
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||    
T  30847728 acacatatgattacattgaattatgtcattttttcaaattattag 30847772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 373106 - 373055
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| ||||||||||||| ||| ||| |||| |||||||||||||||||    
T  373106 caacaccgacacatatgattaaactaaatcatgtcattttctcaaattatta 373055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 2445921 - 2445870
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||||||||||| | |||||||||| ||||||||||||||| | |||||||    
T  2445921 acacatatgattaaattgaattatgtcattttctcaaattatcattggtgtt 2445870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 2896140 - 2896179
Alignment:
Q  229 tacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgt 2896179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 5376495 - 5376558
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| ||||| |||| | | ||||||||||||||||| ||||||| |||||||||| |||||    
T  5376495 cgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgt 5376558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 12443477 - 12443512
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12443477 attacactgaattatgtgattttctcaaattattag 12443512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 18190125 - 18190160
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||||||||| ||||||||||||    
T  18190125 attacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 23738736 - 23738685
Alignment:
Q  211 aacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||| | ||| ||||||||||||| ||||| ||||||||||||    
T  23738736 aacaccaacacatttaattgcactgaattatgtgattttttcaaattattag 23738685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 31015085 - 31015050
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31015085 attacactgaattatgtgattttctcaaattattag 31015050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 37055873 - 37055908
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    |||||||| |||||||||||||||||||||||||||    
T  37055873 attacactaaattatgtaattttctcaaattattag 37055908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 398773 - 398823
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgt 398823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 8010281 - 8010339
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||| | |||| ||| |||| |||||||||| ||||||| ||||||||||||    
T  8010281 ccgacacaacatcgacacttataattatactgaattatataattttttcaaattattag 8010339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 16927187 - 16927237
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||| |||| ||||||||||||||| | ||||| ||||||||||||    
T  16927187 acaccaacatatataattacactgaattatatgattttttcaaattattag 16927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 19637853 - 19637776
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||| |||| || ||||||||||     | ||||||||||||||| ||||| |||| ||||||| |||||||||    
T  19637853 tcccggtgtcggatatgtatcgtgtccgacac-----cgacacatatgattacattgaataatgtcattttcttaaattatta 19637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 24577182 - 24577244
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||| ||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgt 24577244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 113363 - 113306
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 2851059 - 2851022
Alignment:
Q  231 cactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  2851059 cactgaattatgtaattttatcaaattattagcggtgt 2851022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 3921712 - 3921675
Alignment:
Q  224 atgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  3921712 atgattacattgaattatgtcattttctcaaattatta 3921675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 12707867 - 12707928
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 265  Q
    |||||| |||||||| |||||| ||| |||| |||||| | ||||||| |||||||||||||    
T  12707867 ccgacataacaccaatacatataattgcactaaattatatgattttcttaaattattagtgg 12707928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 41017406 - 41017455
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||| |||||| | |||||||| |||||||||||||||||    
T  41017406 acaccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 5898268 - 5898324
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| || ||||| ||||||||||||||||| ||||| ||| |||||||| |||||    
T  5898268 acaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgt 5898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 12612017 - 12611977
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaatta 258  Q
    ||||||||||||||||| |||||||| ||||| ||||||||    
T  12612017 acacatatgattacactcaattatgtgattttttcaaatta 12611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 16812588 - 16812544
Alignment:
Q  224 atgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| ||||||||||||| ||||| ||||||||||| ||||||    
T  16812588 atgattccactgaattatgtgattttgtcaaattattattggtgt 16812544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 19909337 - 19909297
Alignment:
Q  229 tacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||| |||||| |||||||||||||||||| ||||||    
T  19909337 tacactgagttatgtgattttctcaaattattagcggtgtt 19909297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 21378637 - 21378585
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| |||| | | ||||||||||||||||||||||| |||| |||||||    
T  21378637 caacaccgacacttgtaattacactgaattatgtaattttttcaatttattag 21378585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 22947774 - 22947746
Alignment:
Q  234 tgaattatgtaattttctcaaattattag 262  Q
    |||||||||||||||||||||||||||||    
T  22947774 tgaattatgtaattttctcaaattattag 22947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 43492496 - 43492552
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||| || ||||||| |||||| || |||||||||||||| |||||||||    
T  43492496 acaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgt 43492552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 49872888 - 49872844
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||    
T  49872888 acacatataattacactgaattatatagttttctcaaatgattag 49872844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 8039798 - 8039894
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacaca------acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||||||||||| |||||||||||||       ||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  8039798 tcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgtt 8039894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 29508535 - 29508447
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacac-aacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggt 266  Q
    |||||||||||||| |||||| |||||||||| |||| | |||||||| ||||||||||||||| | ||||| ||||||||||||||||    
T  29508535 tcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatgattttttcaaattattagtggt 29508447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 16192744 - 16192801
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  16192744 ccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 20691376 - 20691327
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  20691376 acaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 25948878 - 25948939
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||| |||||||||| ||| ||||||||||||||||| ||||| ||||||||||||    
T  25948878 tgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 5441005 - 5441088
Alignment:
Q  182 cggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtg 267  Q
    |||||| ||||||||||| |||| ||||||||||| |||||||  ||| || |||||||||| ||||||||||||| |||| ||||    
T  5441005 cggtgttggacatgtgtcgtgtctgacacaacaccgacacata--attccattgaattatgtgattttctcaaatttttagcggtg 5441088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 17005616 - 17005678
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||| |||| ||| ||||||||||||||| | ||||| |||||||||||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgtt 17005678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 11313795 - 11313852
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||| |||| ||||||||| |||||||| |||||||| ||||||||||||||||||    
T  11313795 cgacacgacactaacacatataattacactaaattatgtgattttctcaaattattag 11313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 7928507 - 7928451
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  7928507 acaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 9800105 - 9800041
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||| |||| ||  ||||||| |||||||||||||||||||||||||||| |||||    
T  9800105 ccgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgt 9800041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 12704056 - 12704008
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgt 12704008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 45451635 - 45451560
Alignment:
Q  182 cggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||||||||||| ||||||||||     | |||||||| |||| |||||| ||||| ||||||||||||||||||    
T  45451635 cggtgtcggacatgtgtcgtgtccgacac-----cgacacatattattatactgaagtatgtgattttctcaaattattag 45451560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 11493372 - 11493419
Alignment:
Q  221 catatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgt 11493419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 52369826 - 52369783
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  52369826 acacctatgattacattgaattatgtaattttctcaaattatta 52369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 40993309 - 40993374
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 249  Q
    ||||||||||||||||||||| ||||||||||     | |||||||| ||||||||||||||||| |||||    
T  40993309 tcccggtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 4990984 - 4991025
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  4990984 attacactgaattatgtaattttctcaaactattagcggtgt 4991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 10955037 - 10954953
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| |||||||||| ||||| ||||||||||     | |||| | ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  10955037 tcccagtgtcggacacgtgtcgtgtccgacac-----cgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgt 10954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 40150573 - 40150622
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| ||||||||||||||| |||||||| | |||||||||||||||||    
T  40150573 acaccgacacatatgattacattgaattatatcattttctcaaattatta 40150622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 8383314 - 8383258
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||| ||| ||||||||||||||| | |||||||||||||||||| |||||    
T  8383314 acaccgacacttataattacactgaattatatgattttctcaaattattagcggtgt 8383258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 261
Target Start/End: Complemental strand, 21149111 - 21149075
Alignment:
Q  225 tgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||||||| |||||||||||||||||    
T  21149111 tgattacactgaattatgtcattttctcaaattatta 21149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 49505162 - 49505206
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||    
T  49505162 acacatataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 1830394 - 1830351
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||    
T  1830394 acacctatgattacactgaattatgtcattttcttaaattatta 1830351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 3730173 - 3730216
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||    
T  3730173 acacctatgattacactgaattatgtcattatctcaaattatta 3730216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 8789552 - 8789599
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||||    
T  8789552 acaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 10690261 - 10690320
Alignment:
Q  209 acaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||| ||| |||| ||||||||||||||||| ||||||||| |||||||| |||||    
T  10690261 acaataccgacaaatataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 11093633 - 11093578
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||||||| |||||||  |||||||||| ||||| |||||||||||    
T  11093633 gacacgacaccaacacatctgattactttgaattatgtcattttttcaaattatta 11093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 271
Target Start/End: Complemental strand, 11143270 - 11143235
Alignment:
Q  236 aattatgtaattttctcaaattattagtggtgtttg 271  Q
    ||||||||||||||||||||||||||||||| ||||    
T  11143270 aattatgtaattttctcaaattattagtggtttttg 11143235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 11252020 - 11251985
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11252020 attacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 258  Q
    |||| |||||||||||||| |||||||| |||||||| ||||| ||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 21478743 - 21478684
Alignment:
Q  209 acaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||||| ||| |||||| || || | ||||||||| ||||||    
T  21478743 acaacaccaacacatatgattacattgatttatgtcatcttgtgaaattattattggtgt 21478684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 27505336 - 27505253
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||| ||||| |||| ||||| ||||| |||| | | |||||||| |||||||| |||||   ||||||||||    
T  27505336 tcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattag 27505253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 32804548 - 32804591
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| |||||||| |||||||| |||||||||||||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattatta 32804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 4704301 - 4704335
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctca 253  Q
    ||||||||||||||||||||||||| |||||||||    
T  4704301 cacatatgattacactgaattatgtcattttctca 4704335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 4987285 - 4987343
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||  ||||||||| | | ||||||||||||||||| ||||| ||||||||||||    
T  4987285 ccgacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattattag 4987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 14840308 - 14840350
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||    
T  14840308 attacactgaattatgtgattttctgaaattattaatggtgtt 14840350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 21211330 - 21211296
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||| |||||||||||||||||||||||    
T  21211330 attacactgaactatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 25074835 - 25074797
Alignment:
Q  223 tatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  25074835 tatgattacactcaattatgtcattttctcaaattatta 25074797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 29112292 - 29112338
Alignment:
Q  222 atatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||||||||||||| | |||||||||||| |||||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgt 29112338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 34307788 - 34307838
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||| ||||||||||| ||||| |||||||||||||||||| |||||    
T  34307788 acacttataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 2620057 - 2620111
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||   ||||||| |||||||| |||||||||||| |||||||||||    
T  2620057 acaccaacacatag--ttacacttaattatgtgattttctcaaatgattagtggtgt 2620111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 2731877 - 2731820
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||  |||||||| |||||||| |||||||| ||||||| ||| |||||    
T  2731877 ccgacacaacacatacacatataattacacttaattatgtgattttcttaaagtatta 2731820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 3618923 - 3618882
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||||| ||||||||||||||||||| |||||    
T  3618923 attacgctgaattatggaattttctcaaattattagcggtgt 3618882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 4201453 - 4201404
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||| |||||||| |||||||| ||||| |||||||||||    
T  4201453 acaccaacatatataattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 6780421 - 6780466
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaatt 257  Q
    |||||||||||||| ||||||||||| || || |||||||||||||    
T  6780421 acaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 8039269 - 8039216
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||||||| |||| |||||||||| ||||| |||  |||||||||||||||    
T  8039269 gacacaacaccgacacctatgattacattgaatcatgccattttctcaaattat 8039216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 9624689 - 9624648
Alignment:
Q  221 catatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||| |||||||||| ||||||||||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattag 9624648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 12083945 - 12083908
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtg 264  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  12083945 attacactgaattatgtagttttctcaatttattagtg 12083908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 13799561 - 13799512
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||| |||||    
T  13799561 acaccgacacatattattacacttaattatgtcattttctcaaactatta 13799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 14618831 - 14618782
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| |||||||||||||||||  |||||| |||||||||| |||||    
T  14618831 cacatattattacactgaattatgtggttttcttaaattattaggggtgt 14618782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 16789668 - 16789701
Alignment:
Q  228 ttacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||| |||||||||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattatta 16789701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 17568700 - 17568741
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| | |||||||||||||||||||||||||| ||||||    
T  17568700 attacattaaattatgtaattttctcaaattattaatggtgt 17568741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 20503550 - 20503474
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    |||||||||| |||||||||| |||||     |||||| |||| | | ||||||||||||||||| ||||| ||||||||||    
T  20503550 tcccggtgtcagacatgtgtcgtgtcc-----aacaccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 23184066 - 23184123
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||||||||||| ||||||  ||||||| | ||||| |||||||||||    
T  23184066 ccgacacaataccaacacatataattacatagaattatatgattttgtcaaattatta 23184123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Complemental strand, 24633800 - 24633767
Alignment:
Q  235 gaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||| ||||||||||||||||||||||||    
T  24633800 gaattatgtgattttctcaaattattagtggtgt 24633767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 25093559 - 25093510
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||| ||||||||||||| ||| |||||||||||| ||||    
T  25093559 acaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 27513653 - 27513714
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgt-aattttctcaaattatta 261  Q
    |||||||||  ||||| ||||||||||||||| ||||| |||| | ||||||||||||||||    
T  27513653 tgtccgacaagacaccgacacatatgattacattgaataatgtcatttttctcaaattatta 27513714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 28918088 - 28918008
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| |||||||||| ||||| |||||   || ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  28918088 tcccagtgtcggacacgtgtcgtgtcc---acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 28918008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 34910359 - 34910318
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  34910359 attacactgaattatgtgattttttcaaattattagttgtgt 34910318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 18427006 - 18426950
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||| |||| ||||||| ||||||||| ||||| | ||||||||||||||||    
T  18427006 acaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgt 18426950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 23271994 - 23272042
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaatta 258  Q
    ||||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  23271994 caacaccgacacatatgattacattcaattatgtcagtttctcaaatta 23272042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 29386508 - 29386552
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttct 251  Q
    |||| ||||| ||||||||||||||||||||||||| | ||||||    
T  29386508 acacgacaccgacacatatgattacactgaattatgcagttttct 29386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 49651778 - 49651838
Alignment:
Q  202 gtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||| ||||| |||| | | |||||| |||||||||| ||||| ||||||||||||    
T  49651778 gtccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 15410443 - 15410506
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||    
T  15410443 cgacacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgt 15410506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 30502362 - 30502449
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtttg 271  Q
    |||| |||||||||||||||| ||||||||||     | |||||||| |||||||||||||| || |||||||||||||||||| ||||||||    
T  30502362 tcccagtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttg 30502449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 30542705 - 30542792
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtttg 271  Q
    |||| |||||||||||||||| ||||||||||     | |||||||| |||||||||||||| || |||||||||||||||||| ||||||||    
T  30542705 tcccagtgtcggacatgtgtcgtgtccgacac-----cgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttg 30542792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 38749554 - 38749614
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||    
T  38749554 tgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 43001879 - 43001807
Alignment:
Q  190 gacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||||| ||||||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  43001879 gacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 6471878 - 6471941
Alignment:
Q  199 catgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| |||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  6471878 catgtcccacacgacacccacacatataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 39205970 - 39205887
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||||| || ||||| |||| ||||| |||||||||||||| |||||||  |||||| | ||||||||||||||||||    
T  39205970 tcccggtgtcgggcacgtgtcgtgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattag 39205887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 3966566 - 3966504
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||| |||||||| ||||||||||||| ||| |||||||||||||||||| |||||    
T  3966566 gacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgt 3966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 19737483 - 19737533
Alignment:
Q  211 aacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  19737483 aacaccgacacatatgattgcattgaattatgtaattttctcaaattatta 19737533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 2548444 - 2548395
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||||    
T  2548444 acaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 27932277 - 27932236
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  27932277 attacactgaattatgtaattttctcaaattattagcggtgt 27932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 28296385 - 28296336
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  28296385 acaccaacacatatgagtacattgaattatgtcattttctcaaattatta 28296336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 17593718 - 17593774
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||| |||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  17593718 gacacaccaccaacatatataattacactgaattacgtgattttctcaaattattag 17593774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 23015964 - 23016040
Alignment:
Q  185 tgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||  |||| ||||||| |||||| | |||| ||| ||||||||||||||||| |||||||||||| ||||    
T  23015964 tgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 12264837 - 12264888
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||| ||||||    
T  12264837 acacatataattacactgaatcatgtaattttctcaaataattagcggtgtt 12264888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 19293430 - 19293481
Alignment:
Q  217 aacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  19293430 aacacatatgattacacttaattatgttattttcttaaattattattggtgt 19293481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 31084413 - 31084330
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| |||||||||| ||||| |||||||||| ||| | |||| | | |||||| |||||||||| ||||| ||||||||||||    
T  31084413 tcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattag 31084330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 31264489 - 31264446
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  31264489 acacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 38806839 - 38806906
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||| |||| ||||||||| ||||| ||||| |||| || |||||||||||||| ||||||    
T  38806839 tgtccgacacagcaccgacacatatgcttacattgaatcatgtcatattctcaaattattattggtgt 38806906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 23221042 - 23220984
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||||||||| ||||| |||||||| ||||| |||||||||||| |||||    
T  23221042 caacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgt 23220984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 2419902 - 2419865
Alignment:
Q  224 atgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||| |||||||||||||||||||||    
T  2419902 atgattacactgaattgtgtaattttctcaaattatta 2419865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 2577190 - 2577231
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattatta 2577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 28588676 - 28588725
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||| ||| ||||||||||||||||| |||||||||||||||||    
T  28588676 acaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 35017085 - 35017040
Alignment:
Q  221 catatgattacactgaattatgtaattttctcaaattattagtggt 266  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattagtggt 35017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 43208265 - 43208322
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 258  Q
    |||| ||||||||||  ||| ||||||||||| |||||||||| ||||||||||||||    
T  43208265 tgtctgacacaacacagacagatatgattacattgaattatgtcattttctcaaatta 43208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 14873607 - 14873527
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||||| ||||| ||||   ||||||||  ||||| |||||||| |||||||| ||||||||  ||||||||||||||    
T  14873607 tcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 18421815 - 18421890
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    |||||||| |||||||||||| |||||||| |     | |||||||| ||||||||| ||||||| |||||||||||||||    
T  18421815 tcccggtgccggacatgtgtcgtgtccgacgc-----cgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 18592138 - 18592074
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| |||||  ||||||| |||||| |||||||||||||||||| ||| |||||| |||||    
T  18592138 ccgacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgt 18592074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 21194219 - 21194259
Alignment:
Q  224 atgattacactgaattatgtaattttctcaaattattagtg 264  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  21194219 atgattacactgaattatgtgattttctcaaattactagtg 21194259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 22423806 - 22423870
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||| ||| |||| |||| | |||||||||| ||||||||||||||||||| ||||    
T  22423806 ccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgt 22423870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 32766937 - 32767001
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| |||| ||||||||| |||||| |||||| ||  |||||||||||||||||| |||||    
T  32766937 ccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgt 32767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 40212020 - 40211964
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| ||||| | ||||||||||| | ||||||||||||||||||||| ||||||    
T  40212020 cgacacgacaccgatacatatgattatattgaattatgtaattttctcaatttatta 40211964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 41091265 - 41091309
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||    
T  41091265 acacatataattacactgaattatgtgattttctcaaatcattag 41091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 258
Target Start/End: Original strand, 6326314 - 6326345
Alignment:
Q  227 attacactgaattatgtaattttctcaaatta 258  Q
    ||||||||||||||||||||||||||||||||    
T  6326314 attacactgaattatgtaattttctcaaatta 6326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 18607105 - 18607148
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| |||||||||| |||||||||| |||||||||||||||||    
T  18607105 acacctatgattacattgaattatgttattttctcaaattatta 18607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 23012382 - 23012460
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||| |||||||||| |||||     |||||| |||||||| |||||| | |||||| | ||||||||||||||||||    
T  23012382 tcccggtgtcagacatgtgtcgtgtcc-----aacaccgacacatataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 24273039 - 24273078
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaatta 258  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 24389175 - 24389136
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaatta 258  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 32630743 - 32630786
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| |||||| |||||||| |||||||||||||||||||    
T  32630743 acacatataattacattgaattatataattttctcaaattatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 16203797 - 16203847
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| |||||||| |||||||  ||||||||||||||||||    
T  16203797 acaccgacacatataattacactaaattatgagattttctcaaattattag 16203847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 19168829 - 19168879
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||||| |||| ||||| |||||||| ||| |||||    
T  19168829 acacatatgattacactgaataatgtgattttatcaaattaatagcggtgt 19168879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 21194098 - 21194171
Alignment:
Q  180 cccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 258  Q
    ||||||||| |||||||||| |||||     |||||||| || ||| |||||||||||| |||| ||||||||||||||    
T  21194098 cccggtgtctgacatgtgtcgtgtcc-----aacaccaatacctataattacactgaatgatgtgattttctcaaatta 21194171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 27144514 - 27144464
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| |||||||| |||||||| |||| ||||||||||||| |||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgt 27144464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 41600948 - 41600906
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||| | |||||| |||||||||||||||||||||    
T  41600948 cacatatgattatattgaattgtgtaattttctcaaattatta 41600906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 4344787 - 4344750
Alignment:
Q  224 atgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  4344787 atgattacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Original strand, 11596469 - 11596506
Alignment:
Q  224 atgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  11596469 atgattacattgaattatgtcattttctcaaattatta 11596506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Original strand, 19746717 - 19746750
Alignment:
Q  235 gaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||||||||| |||||    
T  19746717 gaattatgtaattttctcaaattattagcggtgt 19746750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 26205768 - 26205805
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaa 255  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  26205768 acacctatgattacactgaattatgtcattttctcaaa 26205805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 34879401 - 34879352
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtg 267  Q
    |||||||| ||||||||||||||| | ||||||||||||| |||| ||||    
T  34879401 acacatattattacactgaattatatgattttctcaaatttttagcggtg 34879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 6035547 - 6035484
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||| ||| |||| ||||||||||||||| | | |||||||||||||||| |||||    
T  6035547 ccgacacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgt 6035484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 9449510 - 9449470
Alignment:
Q  228 ttacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  9449510 ttacattgaattatgtgattttctcaaattattattggtgt 9449470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 11685996 - 11685940
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| |||||||| |||||||  | |||||||||||||||| |||||    
T  11685996 acaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgt 11685940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 19438385 - 19438353
Alignment:
Q  227 attacactgaattatgtaattttctcaaattat 259  Q
    ||||||||||||||||| |||||||||||||||    
T  19438385 attacactgaattatgtgattttctcaaattat 19438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 41558645 - 41558701
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatt 257  Q
    |||||||||| ||||  |||||| | |||||| |||||||||| |||||||||||||    
T  41558645 tgtccgacacgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 36635415 - 36635324
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacaca-acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||| |||  ||||| |||| |||||  |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  36635415 tcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgtt 36635324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 18513232 - 18513292
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||    
T  18513232 tgtccgacacaacactgacacatatgattacattgaattatgtcattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 46180941 - 46180986
Alignment:
Q  215 ccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  46180941 ccaacacatatgattacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 15659752 - 15659812
Alignment:
Q  202 gtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||| |||||||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  15659752 gtccgacacgacaccaacacatataattacaccgaattatgagattttctcaaattattag 15659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 7012131 - 7012074
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||| | || |||||| |||||||||||||| |||||||||||||||||    
T  7012131 ccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattatta 7012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 20743284 - 20743329
Alignment:
Q  216 caacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||    
T  20743284 caacacctatgattacactgaattatgtcattttctcaaattatta 20743329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 40784014 - 40783965
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  40784014 acaccaacacatatgattacgctgaattatgttattatctcaaattatta 40783965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 5775360 - 5775416
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  5775360 acaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgt 5775416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 21945585 - 21945510
Alignment:
Q  182 cggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||||||||||||||||||     ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  21945585 cggtgtcggacatgtgtcatgtccg-----acaccgacacttgtaattacactgaattatgtcattttttcaaattattag 21945510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 3947739 - 3947818
Alignment:
Q  183 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||| ||||| |||||||||| ||||  |||| | | ||||||||||||||||  ||||| ||||||||||||    
T  3947739 ggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattag 3947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 18576039 - 18576086
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  18576039 acaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 24343558 - 24343515
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||| |||||||||||||||||||||||||||||||||||    
T  24343558 acacctataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 29205529 - 29205451
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||||||| |||||     |||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  29205529 tcccggtgtcggacatgtgtcgtgtcc-----aacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 31243556 - 31243599
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  31243556 acacctatgattacactgaattatgtcattttctcaaattatta 31243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 43299983 - 43300022
Alignment:
Q  222 atatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  43299983 atatgattacattgaattatgtaattttctcaaattatta 43300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 43300663 - 43300624
Alignment:
Q  222 atatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  43300663 atatgattacattgaattatgtaattttctcaaattatta 43300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 55941011 - 55941062
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||| |||||||    
T  55941011 acacatatgattatactaaattatgtaattttcttaaattattattggtgtt 55941062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 15029822 - 15029772
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||||||| ||||||||||||||||| || || ||||||||||||    
T  15029822 acaccaacacatataattacactgaattatgtgatattttcaaattattag 15029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 22440609 - 22440651
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 33950193 - 33950143
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||||||||||||| | |||||||| ||||||||||||||||||    
T  33950193 acaccgacacatatgattacattaaattatgtgattttctcaaattattag 33950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 40613501 - 40613451
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||| |||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgt 40613451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 903971 - 903930
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 7214524 - 7214581
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||| || ||||| |||||| | |||||||| |||||||||||||||||||||||||    
T  7214524 acaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgtt 7214581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 8423735 - 8423776
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  8423735 attacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 16189765 - 16189709
Alignment:
Q  213 caccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||| ||||| || ||||||||||||||||| ||||||||||||| |||| ||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgtt 16189709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 17446116 - 17446072
Alignment:
Q  224 atgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||    
T  17446116 atgattacactaaattatgtgattttcttaaattattagtggtgt 17446072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 30103359 - 30103406
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  30103359 acaccgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 37698759 - 37698719
Alignment:
Q  222 atatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  37698759 atataattacactgaattatataattttctcaaattattag 37698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 54580025 - 54580081
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||| ||| ||||||||||||||||| ||||| ||||||||||||| ||||    
T  54580025 acaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgt 54580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 5654599 - 5654642
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| |||||||||| |||||||||| |||||||||||||||||    
T  5654599 acacgtatgattacattgaattatgtcattttctcaaattatta 5654642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 6933326 - 6933275
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||||||||||| |||||||||||  ||||||| | |||||||||||||||    
T  6933326 acacatatgattaaactgaattatgagattttcttacattattagtggtgtt 6933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 14465302 - 14465345
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||| | |||||||||| |||||||||||||||||    
T  14465302 acacatatgattaaattgaattatgtcattttctcaaattatta 14465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 30982872 - 30982935
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtg 267  Q
    ||||||| ||||| |||| ||| ||||||||||| ||||| |||||||||||| ||||| ||||    
T  30982872 ccgacacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 37496800 - 37496718
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccg------acacaacaccaacacatatgattacactgaattatgtaattttctcaaa 255  Q
    |||||||||| |||||||||| ||||||      |||||||||| |||| | |||||||| |||||||||| |||||||||||    
T  37496800 tcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcattttctcaaa 37496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 4672087 - 4672137
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||||||   |||||||||||||||||||||| |||||||||||    
T  4672087 acaccgacacatatagctacactgaattatgtaattttcccaaattattag 4672137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 10546194 - 10546156
Alignment:
Q  223 tatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  10546194 tatgattacattgaattatgtcattttctcaaattatta 10546156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 11110254 - 11110212
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  11110254 acacatatgattacatcgaattatgtcattttctcaaattatt 11110212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 15835640 - 15835690
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaa-ttttctcaaattatta 261  Q
    |||||||||||||||||||||| ||||||| ||| |||| |||||||||||    
T  15835640 acaccaacacatatgattacacggaattatataatttttttcaaattatta 15835690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 22596988 - 22597038
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| |||||||  ||||||||| |||||||||||||||||| ||||||    
T  22596988 acacatgtgattacgttgaattatgcaattttctcaaattattattggtgt 22597038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 32910593 - 32910559
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||||| |||||||||||||||||    
T  32910593 attacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 36386213 - 36386267
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggt 266  Q
    |||||||||| | | |||||||||||||||||  |||||||||||||||| ||||    
T  36386213 acaccaacacctttaattacactgaattatgtccttttctcaaattattattggt 36386267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 51701323 - 51701265
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| |||| ||||| | | |||||||| |||||||||||||| ||||||||||||    
T  51701323 ccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattag 51701265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 56488518 - 56488568
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||| ||||||||| | ||||||||||||| |||| |||||    
T  56488518 acacatatgattaccctgaattatatgattttctcaaattgttagcggtgt 56488568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 269
Target Start/End: Original strand, 21658840 - 21658873
Alignment:
Q  236 aattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||| |||||||||||||||||||||||||    
T  21658840 aattatgtgattttctcaaattattagtggtgtt 21658873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 30522920 - 30522973
Alignment:
Q  215 ccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| ||||  |||||||||||||||| |||||||||||| ||||| |||||    
T  30522920 ccaacatatatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 38148742 - 38148783
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  38148742 attacactgaattatgtgattttctcaaactattagcggtgt 38148783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 40179614 - 40179694
Alignment:
Q  183 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||||||| ||||||||||     | || ||||| ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  40179614 ggtgtcgaacatgtgtcgtgtccgacac-----cgacgcatataattacactgaattatgtgattttttcaaactattaatggtgt 40179694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 46160961 - 46160912
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctca 253  Q
    ||||||| ||||| |||||||| || |||||||||||||| |||||||||    
T  46160961 ccgacacgacaccgacacatataataacactgaattatgttattttctca 46160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 262
Target Start/End: Complemental strand, 847986 - 847958
Alignment:
Q  234 tgaattatgtaattttctcaaattattag 262  Q
    |||||||||||||||||||||||||||||    
T  847986 tgaattatgtaattttctcaaattattag 847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 7970587 - 7970535
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctca 253  Q
    |||| ||||| ||||||| |||||| ||||||||||||||| | |||||||||    
T  7970587 tgtctgacacgacaccaaaacatataattacactgaattatatgattttctca 7970535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 9906842 - 9906782
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||| ||||||| ||||||||||| | |||||  | |||||||| ||||||||    
T  9906842 tgtccgacacaaaaccaacatatatgattacattcaattaatttattttctctaattatta 9906782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 9996889 - 9996849
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattatt 260  Q
    |||||| |||| |||||||||||| ||||||||||||||||    
T  9996889 acatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 11596348 - 11596404
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 19482733 - 19482669
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| |||||||||| | | ||||||| ||||||||| || || ||||||||||||| ||||    
T  19482733 ccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgt 19482669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 24613719 - 24613759
Alignment:
Q  228 ttacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  24613719 ttacattgaattatgtgattttctcaaattattagttgtgt 24613759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 40742656 - 40742592
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||| | |||||||| ||||||||  ||||| | ||||||||||||||||| ||||||    
T  40742656 ccgacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgt 40742592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 49659525 - 49659573
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    ||||||| || |||||||||||| |||||| | ||||||||||||||||    
T  49659525 acaccaaaacctatgattacactaaattatatcattttctcaaattatt 49659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 7658522 - 7658464
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7658522 caacaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgt 7658464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 11803321 - 11803267
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 3508108 - 3508060
Alignment:
Q  213 caccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 4611599 - 4611535
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| |||| | |||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  4611599 ccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 12559074 - 12559158
Alignment:
Q  179 tcccggtgtcggacatgtgtca-tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||||||| |||||  ||||||| |  ||||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  12559074 tcccgttgtcggacacgtgtcggtgtccgagatgacaccaatacatatgattacactgaattatatcattttctcaaattattag 12559158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 13203688 - 13203641
Alignment:
Q  222 atatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtgttgtt 13203641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 34897136 - 34897086
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  34897136 acacatataattacactgaattatgtgattttctcaaattattagcggtgt 34897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 4786340 - 4786396
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| ||||||||||||||||| ||||||| ||||||||| ||||||    
T  4786340 acaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgt 4786396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 7442905 - 7442845
Alignment:
Q  209 acaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||||||||||| | | ||||||||||||||||||||||| | |||||||||| ||||||    
T  7442905 acaacaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgtt 7442845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 18646229 - 18646173
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||||||||||| ||||||    
T  18646229 acaccaacatatatgattacactgaatcatgtcattttttcaaattattactggtgt 18646173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 22493555 - 22493495
Alignment:
Q  208 cacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||| ||| |||||||||||||||||||||| ||||| | ||||||| ||||||||    
T  22493555 cacaacaccgacatatatgattacactgaattatgtgattttttaaaattatcagtggtgt 22493495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 37225753 - 37225801
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||||||    
T  37225753 acatatgattacattgaattatgttattttctcaaattattattggtgt 37225801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 14134756 - 14134705
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagt 263  Q
    ||||| ||| |||| ||||||||||||||||| |||||||||||||||||||    
T  14134756 acaccgacatatataattacactgaattatgtgattttctcaaattattagt 14134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 14634136 - 14634199
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| ||||||||| |||| ||||||||||||||| ||||||||| ||||| |||| |||||    
T  14634136 cgacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgt 14634199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 11927083 - 11927137
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||| |||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 13844598 - 13844648
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  13844598 acaccgacacatataattacactcaattatgtgattttctcaaattattag 13844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 14513187 - 14513225
Alignment:
Q  223 tatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  14513187 tatgattacgctgaattatgtaattttctcaaattatta 14513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 24362210 - 24362260
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||| |||||    
T  24362210 acacatataattacactgaattatgtgattctctcaaattattagcggtgt 24362260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 12985449 - 12985400
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| ||| ||||||||||| |||||||||| |||||||||||||||||    
T  12985449 acaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 31236580 - 31236629
Alignment:
Q  213 caccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| |||||||| |||||| |||||||||| ||||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattag 31236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 39954288 - 39954337
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| |||||||| |||||||| |||||||||||||||||| |||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgt 39954337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 40063997 - 40063952
Alignment:
Q  223 tatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||    
T  40063997 tatgattacaatgaattatgtcattttctcaaattattattggtgt 40063952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 3025602 - 3025558
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||    
T  3025602 acacctataattacactgaattatgtgattttctcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 14731763 - 14731719
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattag 14731719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 20679397 - 20679453
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||| ||| ||||||||||| ||||| |||||||||||||||||| |||||    
T  20679397 acaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgt 20679453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 29198490 - 29198530
Alignment:
Q  221 catatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  29198490 catatgattacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 4122245 - 4122300
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||| |||||||| |||||| |||||||| ||||||| || ||||||||    
T  4122245 gacacaacaccgacacatataattacaatgaattatataattttatctaattatta 4122300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 28883886 - 28883929
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||    
T  28883886 acacctatgattccactgaattatgtcattttctcaaattatta 28883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 11944727 - 11944673
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||| |||||||| |||||||||| |||||| ||||| |||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 12606831 - 12606881
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| |||||| |||||||| | ||||||||||||||||||    
T  12606831 acaccgacacatataattacattgaattatatgattttctcaaattattag 12606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 18067954 - 18067992
Alignment:
Q  230 acactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgt 18067992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 24669475 - 24669441
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||||||| ||||||||||||    
T  24669475 attacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 33389356 - 33389410
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    |||||| ||||||||||||||||||| ||| ||||||||  |||||||| |||||    
T  33389356 cgacacgacaccaacacatatgattatacttaattatgttcttttctcatattat 33389410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 33405362 - 33405435
Alignment:
Q  183 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| |||||||||| ||||||||||     | |||||||| |||||||| ||||||||  ||||||||||||||||    
T  33405362 ggtgtcagacatgtgtcgtgtccgacac-----cgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 14227263 - 14227222
Alignment:
Q  228 ttacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    ||||| |||||||||| ||||||||||||||||| |||||||    
T  14227263 ttacattgaattatgttattttctcaaattattattggtgtt 14227222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 15816126 - 15816187
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| |||| ||| |||||||| |||||||| ||||| ||||||||||||| ||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgt 15816187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 16641943 - 16642032
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||  ||||  |||| |||||||||| ||||| |||||||| |  ||||| ||||||||   ||||||||||||||||| ||||    
T  16641943 tcccggtgttagacacatgtcgtgtccgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaattattagttgtgt 16642032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Original strand, 27067323 - 27067356
Alignment:
Q  235 gaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||| |||||||||||    
T  27067323 gaattatgtaattttctcaaatcattagtggtgt 27067356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 28819256 - 28819199
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| ||| |||||||||||| || ||| |||||  |||||||||||||||||    
T  28819256 ccgacacaaaaccgacacatatgattgcattgagttatgccattttctcaaattatta 28819199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 33382021 - 33382070
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||    
T  33382021 acaccgacacatataattactctgaattatgtcattttcttaaattatta 33382070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 34201056 - 34201097
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| |||||| |||||||||| |||||||||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 36934724 - 36934671
Alignment:
Q  215 ccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||| |||||| |||||||||| ||||| || ||||||||| |||||    
T  36934724 ccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgt 36934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 40332233 - 40332200
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatt 260  Q
    ||||||||||||||||| ||||||||||||||||    
T  40332233 attacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 4948694 - 4948658
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagt 263  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  4948694 attacactgaattatgtgattttttcaaattattagt 4948658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 25172694 - 25172750
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| ||||| |||||||| |||||| | || ||||||||||| ||||||||||||    
T  25172694 gacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattag 25172750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 26418350 - 26418390
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaatta 258  Q
    ||||||||||||||||||||| || | ||||||||||||||    
T  26418350 acacatatgattacactgaataatatgattttctcaaatta 26418390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 29447128 - 29447168
Alignment:
Q  228 ttacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  29447128 ttacattgaattatgtgattttctcaaattattagttgtgt 29447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 37283827 - 37283867
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtg 267  Q
    ||||||||||||||||| ||||||||| |||||||| ||||    
T  37283827 attacactgaattatgtgattttctcagattattagcggtg 37283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 5409805 - 5409888
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||| | | ||| ||||||||||||| ||||| ||||||||||||    
T  5409805 tcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattag 5409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 4909202 - 4909152
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  4909202 acacatatgattacaatgaattatgtaattttctcaaattattattggtgt 4909152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 17307958 - 17307904
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaatta 258  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  17307958 ccgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 27945104 - 27945042
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgt 27945042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 23128658 - 23128719
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgt 23128719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 5233697 - 5233637
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| |||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||    
T  5233697 tgtcggacacaacaccaacacatataattacactagattatgtgattttctcaaattatta 5233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 5835304 - 5835248
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  5835304 acaccgacacatataattacactgaattatgttattttctcaaactattagtggtgt 5835248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 8160481 - 8160417
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| | |||||||||||| |||||||| |||||||||||||||| |||||||||| |||||    
T  8160481 ccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgt 8160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 15902887 - 15902823
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||| |||||||| |||||||| |||||||| ||||| ||||||||||| ||||||    
T  15902887 ccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgt 15902823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 36314626 - 36314678
Alignment:
Q  209 acaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  36314626 acaacaccaacacatatgattacattgaaatatgtcattttctcaaattatta 36314678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 7758390 - 7758323
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| ||||| ||||| || |||| |||||||||| ||||||||| ||||||||||||||||    
T  7758390 tgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattagtggtgt 7758323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 21880233 - 21880159
Alignment:
Q  183 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||| ||||||||||     | |||| | | ||||||||||||||||||||||||||||||||||||    
T  21880233 ggtgtcggacatgtgtcgtgtccgacac-----cgacacttgtaattacactgaattatgtaattttctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 1433540 - 1433462
Alignment:
Q  183 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||  |||| |||||||||| ||||| |||||||| |||||||  ||| |||| |||||||||||||||||    
T  1433540 ggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattatta 1433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 22868093 - 22868043
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgt 22868043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 32093990 - 32094080
Alignment:
Q  180 cccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgt-aattttctcaaattattagtggtgtt 269  Q
    |||||||||||||| ||||| |||||||||| ||||| |||  | | ||||||||||||||||| | |||| ||||||||||||| |||||    
T  32093990 cccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgtt 32094080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 44172887 - 44172941
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| ||||||| |||||||| |||||||||| |||||||||||||||||    
T  44172887 acacaacacaaacacatgtgattacattgaattatgtcattttctcaaattatta 44172941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 7328686 - 7328743
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattag 7328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 13770779 - 13770698
Alignment:
Q  181 ccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||| ||||  |||||||||| ||| | |||| | | ||||||||||||||||||||||| | ||||||||||    
T  13770779 ccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattag 13770698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 29787373 - 29787427
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  29787373 acaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgt 29787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 32308213 - 32308121
Alignment:
Q  182 cggtgtcggacatgtgtcatgtcc------gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||| |||||      ||||| ||||  |||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  32308213 cggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgt 32308121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 9778590 - 9778510
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||||||||||| ||||  |||||||||| ||||| |||| | | |||| |||||||||||| ||||| |||||||||    
T  9778590 tcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 16341564 - 16341504
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||| |||||  ||||||| |||||||| |||||||| |||||||||||||||||    
T  16341564 tgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 20549848 - 20549792
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| |||||||||||||| || |||||||||||||||||| |||||    
T  20549848 acaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgt 20549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 5548744 - 5548677
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| ||||  |||||||| ||||||||||||||| | ||||||||||||||| || |||||    
T  5548744 tgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgt 5548677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 21138969 - 21139044
Alignment:
Q  183 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||| || ||||||||||||| ||||| |||||||| |||||| | |||||||  |||||||||||||||||    
T  21138969 ggtgtcggacacgtatcatgtccgacacgacaccgacacatataattacagt-aattatg--attttctcaaattatta 21139044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 22484104 - 22484026
Alignment:
Q  185 tgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||| |||||     | |||||||| |||| ||||||||||| |||||||| |||||||||| |||||    
T  22484104 tgtcggacatgtgtcatgtctgacac-----cgacacatataattatactgaattatgcaattttctaaaattattagcggtgt 22484026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 22602705 - 22602756
Alignment:
Q  205 cgacacaacaccaacacatatgattacactgaattatgtaattttctcaaat 256  Q
    |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 27732247 - 27732290
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  27732247 acacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 30813854 - 30813819
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||||||||||||||||||||||    
T  30813854 attacactgaattatgtaattttctcaaattattag 30813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 38134414 - 38134457
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  38134414 acacatatgattacattgaattatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 43027438 - 43027521
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||| ||||| |||| ||||| ||||| |||| | |  |||||||| ||||||| ||||| ||||||||||||    
T  43027438 tcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattag 43027521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 3142072 - 3142130
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||| ||||||||||||||| |||||||| | |||| ||||| |||||||    
T  3142072 ccgacacaacaccgacacatatgattacattgaattatatgatttactcaatttattag 3142130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 6630920 - 6630970
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| |||||||||||||| || | ||||||||||||||||||||||    
T  6630920 acacatataattacactgaattaagtgactttctcaaattattagtggtgt 6630970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 18013082 - 18013132
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||| ||||    
T  18013082 acacatataattacactgaattatgtaatttttttaaattattagtagtgt 18013132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 23930272 - 23930230
Alignment:
Q  216 caacacatatgattacactgaattatgtaattttctcaaatta 258  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  23930272 caacacctatgattacactgaattatgtcattttctcaaatta 23930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 31808502 - 31808560
Alignment:
Q  203 tccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| |||||||||||| |||||||| ||| || ||| |||||||||||||||||    
T  31808502 tccgacacgacaccaacacatgtgattacattgacttgtgtcattttctcaaattatta 31808560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 35297669 - 35297723
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| |||||||||||||| |||| | |||||||||| |||||||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 21247738 - 21247787
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||| ||||||||| ||||||| || |||||||||||||||||    
T  21247738 acaccaacacacatgattacattgaattacgtcattttctcaaattatta 21247787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 28155612 - 28155571
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  28155612 attacaccgaattatgtaattttctcaaattattagcggtgt 28155571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 32287437 - 32287521
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||  |||||||||||||||     | ||||||||  || ||||||||||||| ||||||||| |||||||| |||||    
T  32287437 tcccggtgtcggacacttgtcatgtccgacac-----cgacacatatacttgcactgaattatgtgattttctcagattattagcggtgt 32287521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 7133291 - 7133327
Alignment:
Q  223 tatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7133291 tatgattacactgaattatgtcattttctcaaattat 7133327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 7546217 - 7546161
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| |||||||| ||| |||||||||| ||||| ||||||||||| ||||||    
T  7546217 acaccaacccatatgatcacattgaattatgtcattttgtcaaattattactggtgt 7546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 10043029 - 10042938
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccg--acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||||| | ||||  |||| ||||  |||| ||| ||||| || |||||||| | ||| ||||||||||||||||||    
T  10043029 tcccggtgtcggacatgtgtcgtatccggtacacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgt 10042938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 17851482 - 17851438
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattag 17851438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 19206107 - 19206051
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| |||| | |||||||||| |||||||||||||||||| |||||    
T  19206107 acaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgt 19206051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 33384573 - 33384633
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||| |||||||||||||| |||||||| ||||||   ||||||||| |||||||    
T  33384573 tgtccgacaccacaccaacacatataattacactaaattataggattttctcagattatta 33384633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 2424656 - 2424621
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2424656 attacactgaattatgtgattttctcaaattattag 2424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 9482991 - 9482944
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||| |||||||| ||||||||||||| ||| |||||||||||||||    
T  9482991 acaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 12278886 - 12278843
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||    
T  12278886 acacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 44021034 - 44020983
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||    
T  44021034 caacaccgacagatatggttacattgaattatgtaattttttcaaattatta 44020983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 3721150 - 3721100
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| |||| ||| |||||||| ||||||||||||||||||    
T  3721150 acaccgacacatataattatactaaattatgtgattttctcaaattattag 3721100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 19992058 - 19992008
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||| ||| ||||||||||| ||||| ||||||||||||||||||    
T  19992058 acaccgacacttataattacactgaaatatgtgattttctcaaattattag 19992008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 260
Target Start/End: Complemental strand, 24289859 - 24289829
Alignment:
Q  230 acactgaattatgtaattttctcaaattatt 260  Q
    |||||||||||||||||||||||||||||||    
T  24289859 acactgaattatgtaattttctcaaattatt 24289829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 24339707 - 24339649
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| ||||| |||| | | ||||||||||||||||| ||||| ||||||||||||    
T  24339707 ccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24339649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 25481959 - 25481909
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||||||||| | | ||||||||||||||||| ||||| ||||||||||||    
T  25481959 acaccaacacttgtaattacactgaattatgtgattttttcaaattattag 25481909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 46644687 - 46644745
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||| | ||||||||||| |||||| ||||||| ||||||||||| ||||||    
T  46644687 caacaacaacatagatgattacactaaattatataattttttcaaattattattggtgt 46644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 2525846 - 2525895
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| ||||||||||||| | |||||||||| |||| ||||||||||||    
T  2525846 acaccgacacatatgattatattgaattatgtcatttgctcaaattatta 2525895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 8046008 - 8046086
Alignment:
Q  188 cggacatgtgtcatgtccgacaca-acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||| |||||||||||||| |  | ||||||||| || |||||||||||||     |||||||||||||||||||||||||    
T  8046008 cggacacgtgtcatgtccgaccccgataccaacacagataattacactgaattg----attttctcaaattattagtggtgtt 8046086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 23191938 - 23191897
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||| ||||| |||||||||||||||||| |||||    
T  23191938 attacactgaaatatgtgattttctcaaattattagcggtgt 23191897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 26329376 - 26329433
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| || || |||||||| ||||||||||||| |||  ||||||||||||||||    
T  26329376 ccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 30731079 - 30731046
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatt 260  Q
    ||||||||||||||||| ||||||||||||||||    
T  30731079 attacactgaattatgtgattttctcaaattatt 30731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 38143280 - 38143231
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||| |||||| | |||||||| ||||| |||||||||||    
T  38143280 acaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 8090027 - 8090083
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||   ||||||||||||| || || ||||||||||| |||||||||    
T  8090027 acaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtgt 8090083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 11890910 - 11890970
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||| ||||| ||||  || ||||||||||||||| | ||||| |||||||||||    
T  11890910 tgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 18233606 - 18233646
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaatta 258  Q
    |||| ||| ||||||||||||||||| ||||||||||||||    
T  18233606 acacctataattacactgaattatgtcattttctcaaatta 18233646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 26733361 - 26733305
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||| | |||| |||||||||||| ||||| |||||||||||| |||||    
T  26733361 acaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgt 26733305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 37742580 - 37742524
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| |||||| ||||| ||| |||||| | ||||||||||||||||    
T  37742580 acaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgt 37742524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 38630009 - 38629965
Alignment:
Q  211 aacaccaacacatatgattacactgaattatgtaattttctcaaa 255  Q
    |||||| |||||||| ||||||| ||||||||| |||||||||||    
T  38630009 aacacctacacatattattacacagaattatgtcattttctcaaa 38629965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 9744 - 9802
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtgg 265  Q
    |||| ||||| |||||||| |||||||||||||| || |||||||||||||||||||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtgg 9802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 2665884 - 2665947
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||||||  ||||||| |||||||| |||||||| ||||||| |||||||||||||||||    
T  2665884 ccgacacaacacc--cacatataattacactaaattatgtgattttctaaaattattagtggtgtt 2665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 18889593 - 18889643
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||||||||||||||||||||| |||||||||| |||||||    
T  18889593 acaccgacacatatgattacactgaattatgtgattttctcaatttattag 18889643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 21616813 - 21616763
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgt 21616763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 5367277 - 5367197
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtg 264  Q
    |||||| |||||| ||||||| ||||||||||     | |||||||| ||||||||||||||||| |||| |||||||||||||||    
T  5367277 tcccggagtcggatatgtgtcgtgtccgacac-----cgacacatataattacactgaattatgtgatttcctcaaattattagtg 5367197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 44860382 - 44860321
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| |||||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 30527570 - 30527646
Alignment:
Q  185 tgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||| |||||| |||||| | ||| |||||||| |||||||| |||||| | |||||||||||||||||    
T  30527570 tgtcgaacatgtctcatgtgcgacacgataccgacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 42832278 - 42832334
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||| ||| ||||||||||| |||||||||||||||||||||||| |||||    
T  42832278 acaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgt 42832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 10535767 - 10535810
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  10535767 acacttatgattacactgaattatgtcattttctcaaattatta 10535810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 12668417 - 12668476
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagt 263  Q
    ||||||| ||||| |||| ||| ||||||||||||||||| ||||| |||||||||||||    
T  12668417 ccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagt 12668476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 18571023 - 18570980
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  18571023 acacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 23718082 - 23718027
Alignment:
Q  213 caccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| |||||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 23718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 24105754 - 24105699
Alignment:
Q  213 caccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| |||||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 24105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 2331834 - 2331792
Alignment:
Q  229 tacactgaattatgtaattttctcaaattattagtggtgtttg 271  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  2331834 tacactgaattatgtgattttctcaaattattaatggtgtttg 2331792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 4229416 - 4229466
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  4229416 acacatatgattacactgaattatgtcattctcttaaattattattggtgt 4229466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 261
Target Start/End: Complemental strand, 23921295 - 23921261
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatta 261  Q
    |||||||||||||||||||||||||||||||||||    
T  23921295 attacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 29970557 - 29970607
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  29970557 acacatatgattacactgaactatgcgattttctcaaattattagcggtgt 29970607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 37411252 - 37411302
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| || |||||||||||||| |||||||||||||||||| |||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgt 37411302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 2415374 - 2415325
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||  ||||||| |||||| |||||||||||||||||||    
T  2415374 acaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 12748737 - 12748692
Alignment:
Q  216 caacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||    
T  12748737 caacacctatgattacactgaactatgtcattttctcaaattatta 12748692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 18622669 - 18622612
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagt 263  Q
    ||||| |||||||||| ||| ||||||||||||||||| ||||| | |||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattattagt 18622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 18840987 - 18841071
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||||| |||| |||||     | |||| | | |||||||| |||||||||||||| ||||||||||||| ||||    
T  18840987 tcccggtgtcggacatgtgtcgtgtctgacac-----cgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgt 18841071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 28121550 - 28121607
Alignment:
Q  211 aacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||| |||||| ||| |||||  ||||||||||||||||| ||||||    
T  28121550 aacaccaacacatataattacattgatttatgccattttctcaaattattaatggtgt 28121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 34006993 - 34007042
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||| ||||||||||||||||||||| | |||||||||||||||    
T  34006993 acaccgacacctatgattacactgaattatgtcaatttctcaaattatta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 36281734 - 36281693
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 39323306 - 39323265
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  39323306 attacactgaattatgtaattttgtcaaattattagcggtgt 39323265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 40361756 - 40361805
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||| |||||||| |||||||||||||| |||||||||||    
T  40361756 acaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 41843531 - 41843462
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattt 248  Q
    |||| |||||||||| |||||  ||||||||||||||| |||||||| |||| || ||||||||| ||||    
T  41843531 tccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtgattt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 15909641 - 15909677
Alignment:
Q  219 cacatatgattacactgaattatgtaattttctcaaa 255  Q
    ||||||| |||||||||||||||||||||||||||||    
T  15909641 cacatataattacactgaattatgtaattttctcaaa 15909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 18276578 - 18276522
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| ||||| || |||||||||||||| || |||||||||||||||||| |||||    
T  18276578 acaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgt 18276522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 18420430 - 18420486
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||| |||| ||| ||| || |||||||||| ||||||||||||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattag 18420486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 19613620 - 19613664
Alignment:
Q  217 aacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||| |||||| |||||||||| |||||||||||||||||    
T  19613620 aacacatatcattacattgaattatgttattttctcaaattatta 19613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 25846783 - 25846743
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtg 267  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  25846783 attacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 28677958 - 28677910
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 17520080 - 17520119
Alignment:
Q  220 acatatgattacactgaattatgtaattttctcaaattat 259  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  17520080 acatatgattacactgaattatgtgattttcttaaattat 17520119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 21374716 - 21374751
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21374716 attacactgaattatgtaattttttcaaattattag 21374751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 21782835 - 21782870
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21782835 attacactgaattatgtgattttctcaaattattag 21782870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 24011087 - 24011044
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| |||||||||||| |||||||| |||||||||||||||||    
T  24011087 acacctatgattacactaaattatgtcattttctcaaattatta 24011044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 25544532 - 25544489
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| ||||||||||||||||||| | |||||||||||||||||    
T  25544532 acacctatgattacactgaattatatcattttctcaaattatta 25544489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 35449564 - 35449521
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||    
T  35449564 acacatataattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 39279734 - 39279683
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| |||||||| ||||||||||||||| | ||||||||| |||||||    
T  39279734 caacaccgacacatataattacactgaattatttgattttctcatattatta 39279683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 44776667 - 44776608
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    |||||||||| ||||| ||| ||||||||||||||| |||||| ||||||  ||||||||    
T  44776667 tgtccgacacgacaccgacatatatgattacactgagttatgtcattttcataaattatt 44776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 31808128 - 31808078
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||| |||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgt 31808078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 34691807 - 34691857
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| ||||||||||||||| | ||||| ||||||||||||    
T  34691807 acaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 34714219 - 34714269
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| ||||||||||||||| | ||||| ||||||||||||    
T  34714219 acaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 44605140 - 44605190
Alignment:
Q  211 aacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||||| |||||| | |||||| |||||||||| |||||||||||||||||    
T  44605140 aacaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 8300219 - 8300264
Alignment:
Q  210 caacaccaacacatatgattacactgaattatgtaattttctcaaa 255  Q
    ||||||| |||| |||||||||||| |||||||| |||||||||||    
T  8300219 caacaccgacacttatgattacactaaattatgtcattttctcaaa 8300264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 11308012 - 11308053
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattat 259  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  11308012 acacctatgattacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 22085061 - 22085012
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| ||||| ||||||||||| |||||||| ||||||| |||||||||    
T  22085061 acaccgacacaaatgattacactaaattatgtcattttcttaaattatta 22085012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 31026752 - 31026703
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| ||| ||||||||||| |||||||||| ||||||| |||||||||    
T  31026752 acaccgacatatatgattacattgaattatgtcattttcttaaattatta 31026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 36756341 - 36756402
Alignment:
Q  207 acacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||| ||||| |||| ||| ||||||||||||||||| ||||  ||||||||||||| ||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgt 36756402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 45000848 - 45000893
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaatt 257  Q
    ||||| ||||||||||||||| |||||| ||| |||||||||||||    
T  45000848 acaccgacacatatgattacattgaattgtgtcattttctcaaatt 45000893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 896262 - 896218
Alignment:
Q  218 acacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||||||||||| |||| ||||| ||||||||||| ||||||    
T  896262 acacatatgattacattgaaatatgtgattttctcaaactattag 896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 20242729 - 20242785
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||| |||||||| ||||||||||||||||| ||||||| |||  |||||| ||||    
T  20242729 acaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgt 20242785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 38355889 - 38355933
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaat 256  Q
    ||||| |||||||| || |||||||||||||| ||||||||||||    
T  38355889 acaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 135303 - 135364
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    |||| ||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||||||||    
T  135303 tgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattag 135364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 137843 - 137789
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    ||||| |||||||||||||||| ||||||||||| ||| ||||||| ||||||||    
T  137843 gacacgacaccaacacatatgactacactgaattgtgtgattttcttaaattatt 137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 92849 - 92808
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92849 attacactgaattatgtaattttctcaaattattagcggtgt 92808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 1100 - 1036
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| ||||  ||||||||  |||||||||||||||||||||| |||||||||||| |||||    
T  1100 ccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgt 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 44519 - 44583
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||| | ||| |||||||| ||||||||||||||||| ||||||||||||| |||| |||||    
T  44519 ccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 53276 - 53189
Alignment:
Q  179 tcccggtgtcggacatgtgtcatgtccgacacaa------caccaacacatatgattacactgaattatgtaattttctcaaattatt 260  Q
    ||||||||||||||| ||||||||||||||||        |||| |||| ||| ||||||||||||||||| ||||||||||||||||    
T  53276 tcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 99956 - 99901
Alignment:
Q  206 gacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| |||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  99956 gacacgacaccaacacatataattacattgaattatgttattttctaaaattatta 99901  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 90890 - 90843
Alignment:
Q  222 atatgattacactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||| ||||||||||||||| | ||||||||||||||||| |||||||    
T  90890 atataattacactgaattatatgattttctcaaattattaatggtgtt 90843  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 63811 - 63773
Alignment:
Q  231 cactgaattatgtaattttctcaaattattagtggtgtt 269  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  63811 cactgaattatgtaattttctcaaattattagcggtgtt 63773  T

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Target: scaffold0049; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 56987 - 56932
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattat 259  Q
    ||||||| ||||  |||| ||||||||||||||||||| | |||||||||||||||    
T  56987 ccgacacgacactgacacttatgattacactgaattatatcattttctcaaattat 56932  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 18099 - 18153
Alignment:
Q  201 tgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaa 255  Q
    ||||||||||||||||||||| |  ||||||| |||||||||| |||||||||||    
T  18099 tgtccgacacaacaccaacacttgcgattacattgaattatgttattttctcaaa 18153  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 28919 - 28858
Alignment:
Q  200 atgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| ||||||||||| |||||||| |||||| |||||||||  ||||||| |||||||||    
T  28919 atgtctgacacaacaccgacacatataattacattgaattatgcgattttcttaaattatta 28858  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 240023 - 240072
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||| ||||||||||||||| |||||||| | |||||||||||||||||    
T  240023 acaccgacacatatgattacattgaattatattattttctcaaattatta 240072  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 23496 - 23440
Alignment:
Q  193 atgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaatttt 249  Q
    ||||||| |||||||||| ||||| |||| ||| ||||||||||||||||| |||||    
T  23496 atgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttt 23440  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 8066 - 8104
Alignment:
Q  223 tatgattacactgaattatgtaattttctcaaattatta 261  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  8066 tatgtttacactgaattatgtcattttctcaaattatta 8104  T

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Target: scaffold0376 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 6369 - 6319
Alignment:
Q  212 acaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||| |||||||| |||||| ||||||||| |||||| ||||||||||||    
T  6369 acaccgacacatataattacattgaattatgcaattttgtcaaattattag 6319  T

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Target: scaffold0320 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 17037 - 17087
Alignment:
Q  211 aacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||||||| |||||| ||| |||||  |||||||||||||||||    
T  17037 aacaccaacacatataattacattgatttatgccattttctcaaattatta 17087  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 268
Target Start/End: Complemental strand, 26428 - 26394
Alignment:
Q  234 tgaattatgtaattttctcaaattattagtggtgt 268  Q
    |||||||||| ||||||||||||||||||||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgt 26394  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 70359 - 70286
Alignment:
Q  183 ggtgtcggacatgtgtcatgtccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattatta 261  Q
    ||||||||||| ||||| ||||||||||     | |||| ||| ||||||||||||||||| ||||| |||||||||||    
T  70359 ggtgtcggacacgtgtcgtgtccgacac-----cgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 192266 - 192300
Alignment:
Q  227 attacactgaattatgtaattttctcaaattatta 261  Q
    ||||||| |||||||||||||||||||||||||||    
T  192266 attacaccgaattatgtaattttctcaaattatta 192300  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 263366 - 263424
Alignment:
Q  204 ccgacacaacaccaacacatatgattacactgaattatgtaattttctcaaattattag 262  Q
    ||||||| ||||  |||| ||| |||||||||||||||||  |||||||||||||||||    
T  263366 ccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattag 263424  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 14572 - 14531
Alignment:
Q  227 attacactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  14572 attacactgaattatgtgattttttcaaattattagttgtgt 14531  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 13438 - 13401
Alignment:
Q  231 cactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  13438 cactgaattatgtgattttctcaaattattagttgtgt 13401  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 21889 - 21926
Alignment:
Q  231 cactgaattatgtaattttctcaaattattagtggtgt 268  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  21889 cactgaattatgtgattttctcaaattattagttgtgt 21926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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