View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16379_low_13 (Length: 396)
Name: NF16379_low_13
Description: NF16379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16379_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 14 - 380
Target Start/End: Complemental strand, 32385342 - 32384976
Alignment:
| Q |
14 |
ttctcgaatcagggatgcaaatggaagaaggcccgatgatccgttatatgacagaactacactttatatacctcctgaggttttgagaaaaatgactgca |
113 |
Q |
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| T |
32385342 |
ttctcgaatcagggatgcaaatggaagaaggcccgatgatccgttatacgacagaactacactttatatacctcctgaggttttgagaaaaatgactgca |
32385243 |
T |
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| Q |
114 |
tcgcagaaacagtattggagtgtcaaatgtaaatatatggatgttttgctgttctttaaagtggttagtcaatcaataactttgatcattgacattttat |
213 |
Q |
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| T |
32385242 |
tcgcagaaacagtattggagtgtcaaatgtaaatatatggatgttttgctgttctttaaagtggttagtcaatcaataactttgatcattgacattttat |
32385143 |
T |
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| Q |
214 |
tcctttacatcctgtggtacatttgcttatttactactggtattttttatacataacccttagttaatgtgcctaaaataaatcctcaacacagggaaaa |
313 |
Q |
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| T |
32385142 |
tcctttacatcctgtggtacatttgtttatttactactggtattttttatacataacccttagttaatgtgcctaaaataaatcctcaacacagggaaaa |
32385043 |
T |
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| Q |
314 |
ttttatgagctttatgaaatggatgctgaaattggccataaggagctcgattggaaaataacattaa |
380 |
Q |
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| T |
32385042 |
ttttatgagctttatgaaatggatgctgaaattggccataaggagctcgattggaaaataacattaa |
32384976 |
T |
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