View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1638-INSERTION-8 (Length: 699)

Name: NF1638-INSERTION-8
Description: NF1638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1638-INSERTION-8
NF1638-INSERTION-8
[»] chr6 (21 HSPs)
chr6 (7-615)||(31974073-31974704)
chr6 (624-699)||(26670035-26670110)
chr6 (624-699)||(7273361-7273436)
chr6 (622-699)||(9698359-9698436)
chr6 (624-699)||(26466798-26466873)
chr6 (624-697)||(3213399-3213472)
chr6 (627-699)||(24204013-24204085)
chr6 (624-699)||(7292746-7292821)
chr6 (624-699)||(7367548-7367623)
chr6 (625-699)||(13743247-13743321)
chr6 (625-699)||(13748747-13748821)
chr6 (625-699)||(30014343-30014417)
chr6 (620-697)||(21293705-21293782)
chr6 (627-699)||(30735984-30736056)
chr6 (622-697)||(21279926-21280001)
chr6 (624-697)||(33242402-33242475)
chr6 (622-693)||(31109254-31109325)
chr6 (627-697)||(27441544-27441614)
chr6 (625-697)||(33253913-33253985)
chr6 (173-267)||(28973924-28974018)
chr6 (7-54)||(31978184-31978231)
[»] chr3 (27 HSPs)
chr3 (135-431)||(20488011-20488324)
chr3 (625-699)||(42100688-42100762)
chr3 (624-699)||(46941052-46941127)
chr3 (624-699)||(40808864-40808939)
chr3 (622-699)||(25413678-25413755)
chr3 (626-699)||(54237097-54237170)
chr3 (624-699)||(24688428-24688503)
chr3 (624-699)||(47191052-47191126)
chr3 (624-699)||(54246174-54246249)
chr3 (625-699)||(45126954-45127028)
chr3 (626-699)||(42394445-42394518)
chr3 (624-699)||(53273710-53273785)
chr3 (627-699)||(27748565-27748637)
chr3 (625-699)||(36150130-36150204)
chr3 (626-699)||(40480750-40480823)
chr3 (623-697)||(25996266-25996340)
chr3 (627-684)||(1078229-1078286)
chr3 (624-697)||(4190293-4190366)
chr3 (624-697)||(9434123-9434196)
chr3 (624-697)||(10457920-10457993)
chr3 (622-699)||(53581884-53581961)
chr3 (624-697)||(29558262-29558335)
chr3 (625-692)||(34791829-34791896)
chr3 (172-286)||(12881038-12881154)
chr3 (624-697)||(52628005-52628078)
chr3 (624-693)||(11064754-11064821)
chr3 (625-697)||(51757593-51757665)
[»] chr1 (28 HSPs)
chr1 (625-699)||(43571112-43571186)
chr1 (624-699)||(5489775-5489850)
chr1 (625-697)||(37814778-37814850)
chr1 (624-699)||(24769525-24769600)
chr1 (624-699)||(48498988-48499063)
chr1 (622-693)||(750337-750408)
chr1 (622-699)||(4401324-4401402)
chr1 (624-697)||(44112676-44112749)
chr1 (625-697)||(38335918-38335990)
chr1 (625-697)||(48119628-48119700)
chr1 (176-270)||(37627430-37627524)
chr1 (625-699)||(50448286-50448360)
chr1 (625-697)||(35003294-35003366)
chr1 (624-697)||(23989551-23989625)
chr1 (623-697)||(41065151-41065225)
chr1 (627-699)||(2497588-2497660)
chr1 (627-699)||(7447828-7447899)
chr1 (622-697)||(45427773-45427848)
chr1 (623-697)||(38113223-38113297)
chr1 (624-697)||(45639760-45639833)
chr1 (625-697)||(46168383-46168455)
chr1 (624-682)||(14427346-14427404)
chr1 (135-235)||(15918055-15918154)
chr1 (625-658)||(4888055-4888088)
chr1 (624-697)||(26585461-26585534)
chr1 (667-699)||(4888085-4888117)
chr1 (625-693)||(35000145-35000213)
chr1 (625-677)||(51898601-51898653)
[»] scaffold0119 (1 HSPs)
scaffold0119 (624-699)||(684-759)
[»] chr8 (31 HSPs)
chr8 (627-699)||(42295197-42295269)
chr8 (624-699)||(36743509-36743584)
chr8 (625-699)||(11582766-11582840)
chr8 (625-699)||(29705362-29705436)
chr8 (624-699)||(30660768-30660843)
chr8 (627-699)||(30912588-30912660)
chr8 (623-699)||(42197461-42197537)
chr8 (624-699)||(5754902-5754977)
chr8 (625-699)||(2165989-2166063)
chr8 (621-699)||(2546992-2547070)
chr8 (621-699)||(29800976-29801054)
chr8 (117-311)||(12521267-12521456)
chr8 (626-699)||(45397317-45397390)
chr8 (627-699)||(42699259-42699331)
chr8 (621-699)||(20148756-20148834)
chr8 (624-697)||(35181515-35181588)
chr8 (625-697)||(1375542-1375614)
chr8 (627-699)||(26125637-26125709)
chr8 (621-699)||(31384660-31384738)
chr8 (624-697)||(34304787-34304860)
chr8 (623-697)||(18066746-18066820)
chr8 (627-697)||(33630021-33630091)
chr8 (622-697)||(16603654-16603729)
chr8 (625-662)||(28977146-28977183)
chr8 (314-425)||(12521137-12521247)
chr8 (622-693)||(40528666-40528738)
chr8 (172-234)||(33168353-33168415)
chr8 (189-234)||(17315363-17315408)
chr8 (189-234)||(17337274-17337319)
chr8 (624-660)||(19386635-19386671)
chr8 (625-677)||(37038609-37038661)
[»] chr7 (31 HSPs)
chr7 (623-699)||(35069719-35069795)
chr7 (625-699)||(24001038-24001112)
chr7 (625-699)||(42538457-42538531)
chr7 (624-699)||(5015394-5015469)
chr7 (625-699)||(5810950-5811024)
chr7 (625-699)||(42972852-42972926)
chr7 (623-693)||(5194263-5194333)
chr7 (621-699)||(44326174-44326252)
chr7 (621-693)||(43317439-43317511)
chr7 (627-699)||(43343650-43343722)
chr7 (627-699)||(44416960-44417032)
chr7 (628-699)||(26898428-26898499)
chr7 (634-697)||(32029845-32029908)
chr7 (627-697)||(10573751-10573821)
chr7 (625-699)||(45326020-45326094)
chr7 (622-699)||(9216299-9216375)
chr7 (624-697)||(40236918-40236991)
chr7 (627-699)||(4638225-4638297)
chr7 (134-286)||(10234630-10234784)
chr7 (624-699)||(41861673-41861750)
chr7 (625-697)||(31513287-31513359)
chr7 (622-697)||(16180385-16180459)
chr7 (626-697)||(31408661-31408732)
chr7 (625-692)||(39998408-39998475)
chr7 (620-658)||(38160661-38160699)
chr7 (622-697)||(24280624-24280699)
chr7 (641-699)||(27393286-27393344)
chr7 (624-697)||(27535259-27535332)
chr7 (648-697)||(38160607-38160656)
chr7 (623-678)||(47279744-47279799)
chr7 (624-697)||(33384869-33384943)
[»] chr2 (31 HSPs)
chr2 (623-699)||(30838630-30838706)
chr2 (625-699)||(1750414-1750488)
chr2 (625-695)||(16096747-16096817)
chr2 (627-699)||(33229303-33229376)
chr2 (624-699)||(12302279-12302354)
chr2 (624-699)||(43335789-43335864)
chr2 (621-699)||(43490427-43490505)
chr2 (626-699)||(19047158-19047231)
chr2 (625-697)||(12415488-12415560)
chr2 (625-697)||(12427548-12427620)
chr2 (624-697)||(43114556-43114629)
chr2 (627-697)||(11825682-11825752)
chr2 (624-697)||(4764754-4764827)
chr2 (626-677)||(34817824-34817875)
chr2 (627-693)||(41282006-41282072)
chr2 (624-693)||(16803967-16804036)
chr2 (624-693)||(16843249-16843318)
chr2 (625-693)||(13780767-13780835)
chr2 (622-697)||(18491702-18491777)
chr2 (624-682)||(966877-966935)
chr2 (172-234)||(24185325-24185387)
chr2 (625-660)||(42849911-42849946)
chr2 (627-697)||(6518497-6518566)
chr2 (620-697)||(8896611-8896688)
chr2 (624-697)||(34895769-34895842)
chr2 (621-694)||(42026763-42026838)
chr2 (627-697)||(4299448-4299518)
chr2 (627-693)||(7070418-7070484)
chr2 (623-697)||(14285674-14285748)
chr2 (169-283)||(31603507-31603621)
chr2 (272-310)||(41700297-41700335)
[»] chr4 (38 HSPs)
chr4 (624-699)||(1771292-1771367)
chr4 (624-699)||(33703140-33703215)
chr4 (624-699)||(25051692-25051767)
chr4 (625-699)||(27316739-27316813)
chr4 (625-699)||(27550309-27550383)
chr4 (625-699)||(35017733-35017806)
chr4 (627-699)||(43949827-43949900)
chr4 (624-699)||(27864563-27864638)
chr4 (624-699)||(28982848-28982923)
chr4 (624-699)||(55966372-55966447)
chr4 (625-699)||(12496956-12497030)
chr4 (624-693)||(28988472-28988541)
chr4 (627-699)||(39631102-39631175)
chr4 (627-699)||(43514712-43514784)
chr4 (623-699)||(48463476-48463552)
chr4 (627-697)||(27893870-27893940)
chr4 (626-699)||(41878407-41878480)
chr4 (624-699)||(23035979-23036054)
chr4 (628-699)||(23204804-23204875)
chr4 (624-697)||(711959-712032)
chr4 (625-697)||(17619180-17619252)
chr4 (627-697)||(3756274-3756344)
chr4 (627-699)||(43735744-43735816)
chr4 (625-697)||(55272404-55272476)
chr4 (623-697)||(32728355-32728429)
chr4 (624-697)||(960898-960971)
chr4 (625-694)||(41847971-41848040)
chr4 (627-699)||(31680904-31680976)
chr4 (622-697)||(48435607-48435682)
chr4 (627-697)||(35037007-35037077)
chr4 (623-699)||(21687004-21687080)
chr4 (625-697)||(45490341-45490413)
chr4 (621-676)||(30189269-30189324)
chr4 (136-231)||(31371696-31371790)
chr4 (622-677)||(50526086-50526141)
chr4 (624-682)||(46827749-46827807)
chr4 (623-697)||(49229692-49229766)
chr4 (667-699)||(51512291-51512323)
[»] chr5 (15 HSPs)
chr5 (625-699)||(2614675-2614749)
chr5 (625-699)||(22512305-22512379)
chr5 (625-699)||(33855069-33855143)
chr5 (625-699)||(41334689-41334763)
chr5 (624-699)||(7617132-7617207)
chr5 (624-699)||(18033981-18034056)
chr5 (624-699)||(33801468-33801543)
chr5 (627-683)||(25915029-25915085)
chr5 (625-697)||(32473422-32473494)
chr5 (627-697)||(5256997-5257067)
chr5 (624-697)||(38470578-38470651)
chr5 (621-697)||(17208070-17208146)
chr5 (115-283)||(16766449-16766618)
chr5 (624-697)||(30622747-30622819)
chr5 (622-697)||(39122461-39122535)
[»] scaffold0187 (2 HSPs)
scaffold0187 (622-699)||(14214-14291)
scaffold0187 (622-699)||(24542-24619)
[»] scaffold0038 (1 HSPs)
scaffold0038 (626-699)||(112656-112729)
[»] scaffold0385 (1 HSPs)
scaffold0385 (624-699)||(11250-11325)
[»] scaffold0157 (1 HSPs)
scaffold0157 (625-699)||(23447-23521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (627-697)||(45747-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (625-697)||(35484-35556)


Alignment Details
Target: chr6 (Bit Score: 436; Significance: 0; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 7 - 615
Target Start/End: Original strand, 31974073 - 31974704
Alignment:
Q  7 acaatagtatcttagttggttaacaattttaaacatttcttccttagc-----caaattaaagtgaaataagtgcctgaaacctaaacct--ataccctt 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||     |||||||||||||||||||||||||||||| ||||||  ||||||||    
T  31974073 acaatagtatcttagttggttaacaatttcaaacatttcttccttagcatagccaaattaaagtgaaataagtgcctgaaacccaaacctccataccctt 31974172  T
Q  100 tatgctttgagcttggattagaataggaactataataaaatagagtctagacttgagattgtttaagggtccatcattagataattcccacaatctcaag 199  Q
    | ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  31974173 tctgctttgagcttgaattagaataggaaatataataaaagagagtctagacttgagattgtttaagggtccatcattagataattcccacaatcccagg 31974272  T
Q  200 actagaaaagtctactcatacatgatcatagtagatgagggagtagaagatgaagacataaaagtaaatgatataaaagtaaatgacagaatgaaaacaa 299  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31974273 actagaaaagtctactcatacatgatcatagtagatgaggtaacagaagatgaagacataaaagtaaatgatataaaagtaaatgacagaatgaaaacaa 31974372  T
Q  300 agcgataaagagctgaaa----------------tgtaaagaacataaaatagagacaaggaagcaaaggaatgcaaataaagaagaaaagcttaagaaa 383  Q
    ||||||||||| ||||||                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31974373 agcgataaagaactgaaatgtaaagtactgaaattgtaaagaacataaaatagagacaaggaagcaaaggaatgcaaataaagaagaaaagcttaagaaa 31974472  T
Q  384 acatcaagaacttgtattcaactttgcagtgagtttacaagtctaaagatgtcccaatgcctcataaacgaggtatatttatagcctagaaccatagaaa 483  Q
    || |||| ||||||  |||||||||| |||  | |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  31974473 acttcaacaacttgatttcaactttggagtaggattacaagtctaaagatgtcccaatgcctcataaatgaggaatatttatagcctagaaccatagaaa 31974572  T
Q  484 atacctgcaatgcaacctaaagagtgagattcgttgttcctgaaaatacattcaaaagcagttataggtggagtaccaggtgcgacaccatctatattac 583  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  31974573 atacctgcaatgcaacctaaagagtgagattcattgttcctaaaaatacatgcaaaagtagttataggtggagtacaaggtgcgacaccatctatattac 31974672  T
Q  584 acttaatccaattcaacataggggttgtcaaa 615  Q
    |||||||||||||||||||||| |||||||||    
T  31974673 acttaatccaattcaacataggagttgtcaaa 31974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 26670110 - 26670035
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26670110 aggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagt 26670035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 7273436 - 7273361
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  7273436 aggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagt 7273361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 9698436 - 9698359
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  9698436 ataggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 9698359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 26466798 - 26466873
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  26466798 aggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagt 26466873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 3213399 - 3213472
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  3213399 aggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaa 3213472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 24204085 - 24204013
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagt 24204013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 7292746 - 7292821
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||| ||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  7292746 aggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagt 7292821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 7367548 - 7367623
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||| ||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  7367548 aggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagt 7367623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 13743321 - 13743247
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||| ||||||| |||| |  |||||||||||||||||||||||||||||||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagt 13743247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 13748821 - 13748747
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||| ||||||| |||| |  |||||||||||||||||||||||||||||||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagt 13748747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 30014343 - 30014417
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||| ||||||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagt 30014417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 620 - 697
Target Start/End: Complemental strand, 21293782 - 21293705
Alignment:
Q  620 taataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||| |||||||||||||||||| ||||||||||||||    
T  21293782 taataggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaa 21293705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 30735984 - 30736056
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagt 30736056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 622 - 697
Target Start/End: Original strand, 21279926 - 21280001
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||||||| |||||   ||||| ||| ||||||||||||||||||||||||||    
T  21279926 ataggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaa 21280001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 33242402 - 33242475
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||| |||| || ||||||| |||||||||||||||||||| ||| ||||||||||    
T  33242402 aggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaa 33242475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 693
Target Start/End: Complemental strand, 31109325 - 31109254
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||||||||||||||||| || |||| | |||| ||||||||||| | |||||||||||||    
T  31109325 ataggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttg 31109254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 627 - 697
Target Start/End: Original strand, 27441544 - 27441614
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||| || ||||||  |||||||| || |||||||| ||||||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaa 27441614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 33253913 - 33253985
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||| |||| ||  |||||  ||||||||||||||| |||||||| || |||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaa 33253985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 28974018 - 28973924
Alignment:
Q  173 tcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtagatgagggagtagaagatgaagacataaaagtaaa 267  Q
    ||||||||| ||||| |||||||| ||| |||||||||| | ||| |||| |||||||||||  ||||| || || || ||||||| ||||||||    
T  28974018 tcattagattattccaacaatctcgagattagaaaagtccattcacacataatcatagtagaaaagggattaaaatataaagacatgaaagtaaa 28973924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 31978184 - 31978231
Alignment:
Q  7 acaatagtatcttagttggttaacaattttaaacatttcttccttagc 54  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||| ||||    
T  31978184 acaatagtatcttggttggttaacaatttcaaacattgcttccatagc 31978231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 4e-52; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 135 - 431
Target Start/End: Original strand, 20488011 - 20488324
Alignment:
Q  135 taaaatagagtctagacttgagattgtttaagggtccatcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtaga 234  Q
    |||||||||||||||| ||| ||||||||  |||||||||||||||||||| ||| |||  |||||||||| ||||||| ||||| ||||||||||||||    
T  20488011 taaaatagagtctagaattgggattgtttgggggtccatcattagataatttccaaaataccaagactagagaagtctattcatatatgatcatagtaga 20488110  T
Q  235 tgagggagtagaagatgaaga-cataaaagtaaatgatataaaagtaaatgacagaatgaaaacaaagcgataaagagctgaaatgt------------- 320  Q
     |||||| || |||| ||||| |||||||||| |||||||||||||||||| | |||||||| |||||| ||| ||| |||||||||                 
T  20488111 cgagggactaaaagacgaagaccataaaagtatatgatataaaagtaaatggcggaatgaaatcaaagcaatagagaactgaaatgtaaagtactagaaa 20488210  T
Q  321 ---aaagaacataaaatagagacaaggaagcaaaggaatgcaaataaagaagaaaagcttaagaaaacatcaagaacttgtattcaactttgcagtgagt 417  Q
       |||||||| | |||| | ||||| ||| ||  |||||||||||||||| |||||||||||||||   |||||||||| ||||||||||| ||||||     
T  20488211 tgcaaagaacagagaatacatacaagtaagtaactgaatgcaaataaagaacaaaagcttaagaaaattgcaagaacttgaattcaactttggagtgaga 20488310  T
Q  418 ttacaagtctaaag 431  Q
    ||||||||||||||    
T  20488311 ttacaagtctaaag 20488324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 42100688 - 42100762
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 42100762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 46941052 - 46941127
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46941052 aggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagt 46941127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 40808864 - 40808939
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40808864 aggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagt 40808939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 622 - 699
Target Start/End: Original strand, 25413678 - 25413755
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||    
T  25413678 ataggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagt 25413755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 54237097 - 54237170
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 54237170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 24688503 - 24688428
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||||||||    
T  24688503 aggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagt 24688428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 47191126 - 47191052
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||    
T  47191126 aggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagt 47191052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 54246249 - 54246174
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||    
T  54246249 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagt 54246174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 45127028 - 45126954
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagt 45126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 626 - 699
Target Start/End: Complemental strand, 42394518 - 42394445
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagt 42394445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 53273785 - 53273710
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||| ||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  53273785 aggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagt 53273710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 27748565 - 27748637
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||||  |||||||||||||||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagt 27748637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 36150130 - 36150204
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||| ||||||||||| |||||| |||| ||||||| |||||| ||||||||||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagt 36150204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 40480750 - 40480823
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||| ||  || ||||||||| || |||||||||||||||||||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagt 40480823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 25996266 - 25996340
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||||| || |||| || |||||||||||||| ||||| ||| ||||||||||    
T  25996266 taggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaa 25996340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 684
Target Start/End: Original strand, 1078229 - 1078286
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagg 684  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtattagg 1078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 4190366 - 4190293
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||  ||||||||| |||||||||||||    
T  4190366 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaa 4190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 9434123 - 9434196
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||||||| |||||||| ||||||||||    
T  9434123 aggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaa 9434196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 10457993 - 10457920
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||| |||| || ||||||  ||||||||||||||| |||| ||||||||||||||    
T  10457993 aggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaa 10457920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 53581961 - 53581884
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||| |||||||||||||||||| |||||||| |||||  ||||||||| || ||||||||||||||||||| |||||    
T  53581961 atagaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagt 53581884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 29558335 - 29558262
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||| ||||||| ||||||||||||||||| |||| |||||||||||||| || ||||||| |||| |||||||    
T  29558335 aggacaatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaa 29558262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 625 - 692
Target Start/End: Original strand, 34791829 - 34791896
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatatttt 692  Q
    |||||||||||||||||||||||||| || ||||||  |||||| ||| |||| |||||||| |||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacatttt 34791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 12881154 - 12881038
Alignment:
Q  172 atcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtagatgagggagtaga--agatgaagacataaaagtaaatg 269  Q
    ||||||| || ||||| |||||| |||||  |||||||||||||||  |||||||||||||||  ||||| || |  | || ||||||| |||||||| |    
T  12881154 atcattaaattattcctacaatcccaagataagaaaagtctactcacccatgatcatagtagacaagggattaaaatatataaagacatgaaagtaaaag 12881055  T
Q  270 atataaaagtaaatgac 286  Q
      |||||||||||||||    
T  12881054 gcataaaagtaaatgac 12881038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 52628078 - 52628005
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||| ||||||||||||| || |||| |  |||||||||| |||| |||| | ||||||||||||    
T  52628078 aggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaa 52628005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 693
Target Start/End: Complemental strand, 11064821 - 11064754
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||  |||||| | ||||||| ||||||||||||||||||| |||  |||| |||||||||    
T  11064821 aggaaaatgtta--tgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttg 11064754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 51757593 - 51757665
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||| |||||| ||||||||||| || ||||||  |||||||||| |||| |||| ||| ||||| ||||    
T  51757593 ggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaa 51757665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-34; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 43571186 - 43571112
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 43571112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 5489775 - 5489850
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  5489775 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 5489850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 37814778 - 37814850
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaa 37814850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 24769600 - 24769525
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||| |||||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  24769600 aggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagt 24769525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 48499063 - 48498988
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  48499063 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagt 48498988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 622 - 693
Target Start/End: Complemental strand, 750408 - 750337
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||| ||||||||||||    
T  750408 ataggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttg 750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 622 - 699
Target Start/End: Original strand, 4401324 - 4401402
Alignment:
Q  622 ataggaaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||| |||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  4401324 atagaaaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagt 4401402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 44112676 - 44112749
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| ||||||||||    
T  44112676 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 44112749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 38335918 - 38335990
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| || ||||||| |||||||| |||||| |||| ||||||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaa 38335990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 48119628 - 48119700
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||| ||||||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaa 48119700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 37627524 - 37627430
Alignment:
Q  176 ttagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtagatgagggagtagaagatgaagacataaaagtaaatga 270  Q
    |||||| ||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||  || || || ||||| ||||||| |||||||||||    
T  37627524 ttagattattccaacaatcttaagactagaaatgtctactcacacatgatcatagtagacaagagattaaaagataaagacatgaaagtaaatga 37627430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 50448360 - 50448286
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||| ||||||| ||||||  |||||||||||  |||||||||||||||||| ||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagt 50448286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 35003294 - 35003366
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||||||||  |||| ||||||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaa 35003366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 23989625 - 23989551
Alignment:
Q  624 aggaaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| |||| |||||   |||||| |||| |||||||||||||||||||||||    
T  23989625 aggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaa 23989551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 41065151 - 41065225
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||||| || ||||||   |||||||||||||| |||||||  ||||||||||    
T  41065151 taggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaa 41065225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 2497660 - 2497588
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||||||||| ||||| ||||||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagt 2497588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 7447828 - 7447899
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||| |||||||||||||| | ||||||||| |||||||||||  ||||||||| |||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagt 7447899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 622 - 697
Target Start/End: Complemental strand, 45427848 - 45427773
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||| ||| |||| || ||||||  ||||||||| ||||| |||||||| ||||||||||    
T  45427848 ataggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaa 45427773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 697
Target Start/End: Complemental strand, 38113297 - 38113223
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||| |||||||||||||| || ||||||  ||||||||||||||| ||||  || ||||||||||    
T  38113297 taggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaa 38113223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 45639833 - 45639760
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||| ||||| || |||| |  ||||||||||||||  |||| ||||||||||||||    
T  45639833 aggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaa 45639760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 46168383 - 46168455
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| || || | |  ||||||||||| ||| |||| ||||||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaa 46168455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 682
Target Start/End: Original strand, 14427346 - 14427404
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtatta 682  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||||| |||| ||||    
T  14427346 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 15918154 - 15918055
Alignment:
Q  135 taaaatagagtctagacttgagattgtttaagggtccatcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtaga 234  Q
    |||||||| ||||||||||||| ||| ||| |  || |||||||||| ||||| |||||| ||| || || ||||||||||||  || ||||||||||||    
T  15918154 taaaatagggtctagacttgag-ttgattaggattcaatcattagattattccaacaatcccaatacaaggaaagtctactcaatcaagatcatagtaga 15918056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 658
Target Start/End: Original strand, 4888055 - 4888088
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctaca 658  Q
    |||||||||||||||||| |||||||||||||||    
T  4888055 ggaaaatgttacatgaacgccctttattcctaca 4888088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 26585461 - 26585534
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||| |||||||  ||||| || |||||   ||||||||||||||| |||| ||||||||| ||||    
T  26585461 aggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaa 26585534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 667 - 699
Target Start/End: Original strand, 4888085 - 4888117
Alignment:
Q  667 tacaccccatgtattagggatattttggtaagt 699  Q
    |||| ||||||||||||||||||||||||||||    
T  4888085 tacatcccatgtattagggatattttggtaagt 4888117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 625 - 693
Target Start/End: Complemental strand, 35000213 - 35000145
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||||||||| |||| || |||||   |||||| ||  ||||||||||||| ||||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttg 35000145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 625 - 677
Target Start/End: Original strand, 51898601 - 51898653
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 677  Q
    |||||||||||||| ||||||||||||| ||| ||  | ||||||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 51898653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 684 - 759
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  684 aggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagt 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 42295197 - 42295269
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagt 42295269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 36743584 - 36743509
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  36743584 aggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 36743509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 11582766 - 11582840
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 11582840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 29705362 - 29705436
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagt 29705436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 30660843 - 30660768
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||||    
T  30660843 aggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagt 30660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 30912660 - 30912588
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagt 30912588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 623 - 699
Target Start/End: Complemental strand, 42197537 - 42197461
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| |||| | |||||||||||||||||||||||||    
T  42197537 taggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagt 42197461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 5754902 - 5754977
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||||||||||||||||    
T  5754902 aggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagt 5754977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 2166063 - 2165989
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagt 2165989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 2546992 - 2547070
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||||||| ||||||    
T  2546992 aataggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagt 2547070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 29801054 - 29800976
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||| |||||||||||| |||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  29801054 aatagaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagt 29800976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 117 - 311
Target Start/End: Complemental strand, 12521456 - 12521267
Alignment:
Q  117 ttagaataggaactataataaaatagagtctagacttgagattgtttaagggtccatcattagataattcccacaatctcaagactagaaaagtctactc 216  Q
    ||||||||| ||||  ||||||||||| |||||||||| ||||| ||| |  |||||||||| || ||||| |||| | | ||    |||||||| ||||    
T  12521456 ttagaatagaaactcaaataaaatagattctagacttgggattgattaggactccatcattaaattattccaacaa-cactag----gaaaagtccactc 12521362  T
Q  217 atacatgatcatagtagatgagggagtagaagatgaagacataaaagtaaatgatataaaagtaaatgacagaatgaaaacaaagcgataaagag 311  Q
    | ||||||||||| || |  | ||| || ||||| ||||||| ||||||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  12521361 acacatgatcataatatacaaaggattataagataaagacatgaaagtaaatgacataaaagtaaatgaaggaacgaaaacaaagcgataaagag 12521267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 45397317 - 45397390
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagt 45397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 42699259 - 42699331
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||| ||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagt 42699331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 20148756 - 20148834
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||| |||||||||||| |||||||||||||| |||| | ||||||||||| ||| ||||||||||||||||||||||    
T  20148756 aatagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagt 20148834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 35181515 - 35181588
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| ||||||||||    
T  35181515 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 35181588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 1375542 - 1375614
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||| ||||||||||||| ||||||| ||||||  |||||||||||||| ||||||||||||||||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaa 1375614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 26125637 - 26125709
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||| |||||||||||||| ||||   |||||||||||| |||||||||||||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagt 26125709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 31384660 - 31384738
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||| | ||||||||||||||||||||| ||||    |||||||||||||||||||||| ||||||||||||||    
T  31384660 aataggaaagtattacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagt 31384738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 34304787 - 34304860
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||||||| ||||||||||    
T  34304787 aggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 34304860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 623 - 697
Target Start/End: Complemental strand, 18066820 - 18066746
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||||| || ||||    |||||||| ||||||||||||||||||||| ||||    
T  18066820 taggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaa 18066746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 627 - 697
Target Start/End: Complemental strand, 33630091 - 33630021
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||| ||| |||||||| ||||| ||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaa 33630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 622 - 697
Target Start/End: Complemental strand, 16603729 - 16603654
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||| |||||||||| || ||||||| ||| ||||||||||| ||||  || ||||||||||    
T  16603729 ataggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaa 16603654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 625 - 662
Target Start/End: Original strand, 28977146 - 28977183
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctc 662  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28977146 ggaaaatgttacatgaacaccctttattcctacacctc 28977183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 425
Target Start/End: Complemental strand, 12521247 - 12521137
Alignment:
Q  314 gaaatgtaaagaacataaaatagagacaaggaagcaaaggaatgcaaataaagaagaaaagcttaagaaaacatcaagaacttgtattcaactttgcagt 413  Q
    ||||||||||||||| |||||| || |||| ||| | || ||||||||||||||| |||| ||||| |||| || | |||||||  |||||||||| |||    
T  12521247 gaaatgtaaagaacaaaaaataaaggcaagaaagtacagaaatgcaaataaagaacaaaaacttaaaaaaatat-aggaacttgatttcaactttggagt 12521149  T
Q  414 gagtttacaagt 425  Q
     || ||||||||    
T  12521148 aagattacaagt 12521137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 693
Target Start/End: Complemental strand, 40528738 - 40528666
Alignment:
Q  622 ataggaaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||  |||||||||||||||| ||||  | ||| ||||||||||||||| ||||||||| ||||||    
T  40528738 ataggaaaataatacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttg 40528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 33168353 - 33168415
Alignment:
Q  172 atcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtaga 234  Q
    |||||||||| ||||| |||||| | ||||||||||||| ||||||   ||||||||||||||    
T  33168353 atcattagattattccaacaatcacgagactagaaaagtttactcactaatgatcatagtaga 33168415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 17315363 - 17315408
Alignment:
Q  189 acaatctcaagactagaaaagtctactcatacatgatcatagtaga 234  Q
    |||||||||||||||||| ||| ||||||  |||||||||||||||    
T  17315363 acaatctcaagactagaatagtttactcactcatgatcatagtaga 17315408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 17337274 - 17337319
Alignment:
Q  189 acaatctcaagactagaaaagtctactcatacatgatcatagtaga 234  Q
    |||||||||||||||||| ||| ||||||  |||||||||||||||    
T  17337274 acaatctcaagactagaatagtttactcactcatgatcatagtaga 17337319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 624 - 660
Target Start/End: Complemental strand, 19386671 - 19386635
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacc 660  Q
    ||||||||||||||||||||||||||| || ||||||    
T  19386671 aggaaaatgttacatgaacaccctttaatcatacacc 19386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 625 - 677
Target Start/End: Complemental strand, 37038661 - 37038609
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 677  Q
    |||||||||||||| ||||||||||||| ||| ||  | ||||||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 37038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 623 - 699
Target Start/End: Original strand, 35069719 - 35069795
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35069719 taggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagt 35069795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 24001112 - 24001038
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 24001038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 42538531 - 42538457
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 42538457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 5015394 - 5015469
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  5015394 aggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagt 5015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 5811024 - 5810950
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||| || |||||||||||||||| |||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagt 5810950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 42972852 - 42972926
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||| |||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagt 42972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 623 - 693
Target Start/End: Complemental strand, 5194333 - 5194263
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| ||| ||||||||||    
T  5194333 taggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttg 5194263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 44326174 - 44326252
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||| |||||||||||| |||||||||||||| |||| | ||||||||||| ||| ||||||||||||||||||||||    
T  44326174 aatagaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagt 44326252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 621 - 693
Target Start/End: Original strand, 43317439 - 43317511
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| || |||  ||||||||||||||    
T  43317439 aataggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttg 43317511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 43343722 - 43343650
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||| | |||||| |||||||  ||||||||||||||||||||||||||||||| |||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagt 43343650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 44417032 - 44416960
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||| | |||||| |||||||  ||||||||||||||||||||||||||||||| |||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagt 44416960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 628 - 699
Target Start/End: Complemental strand, 26898499 - 26898428
Alignment:
Q  628 aaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||| ||||||| ||||||  ||||||||  |||||||||||||||||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagt 26898428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 634 - 697
Target Start/End: Complemental strand, 32029908 - 32029845
Alignment:
Q  634 tacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaa 32029845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 627 - 697
Target Start/End: Original strand, 10573751 - 10573821
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||| |||||||||||||| |||| |  |||||||||||||||||||||| ||||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaa 10573821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 45326020 - 45326094
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||| |||||||| |||||| ||||||| |||| | ||||||||||||||| ||||||||||||||||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagt 45326094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 622 - 699
Target Start/End: Original strand, 9216299 - 9216375
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||| | |  |||||||| |||||| ||||| |||||||||||||||    
T  9216299 ataggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagt 9216375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 40236918 - 40236991
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || |||| |  ||||||||||||||| |||||||| ||||||||||    
T  40236918 aggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaa 40236991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 4638297 - 4638225
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||| ||||||| |||||   |||||||||||||| ||||| ||||||||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 286
Target Start/End: Complemental strand, 10234784 - 10234630
Alignment:
Q  134 ataaaatagagtctagacttgagattgtttaagggtccatcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcat--agt 231  Q
    |||||||||||| |||||||| | ||  ||| |  || |||||||||| ||| | |||||| |||||||| ||| ||||||||||||||||| ||  |||    
T  10234784 ataaaatagagtttagacttgggtttcattaggattcaatcattagattatttcaacaatcacaagactaaaaaggtctactcatacatgattatagagt 10234685  T
Q  232 agatgagggagtagaagatgaagacataaaagtaaatgatataaaagtaaatgac 286  Q
    |||  ||||| ||||| || ||  ||| ||||||||||| |||||||||||||||    
T  10234684 agacaagggattagaaaataaatgcatgaaagtaaatgacataaaagtaaatgac 10234630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 41861673 - 41861750
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtat--tagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||  ||| |||||||||||||||    
T  41861673 aggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagt 41861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 625 - 697
Target Start/End: Original strand, 31513287 - 31513359
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||| ||||| || ||||||  |||||| |||||||| |||| ||||||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaa 31513359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 622 - 697
Target Start/End: Complemental strand, 16180459 - 16180385
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||| |||||||||||| |||||| |||||||||||||| |||||||||||||| ||||||   ||||||||||||    
T  16180459 atagaaaaatgttacatcaacaccatttattcctacacc-cattgtacaccccacgtattataaatattttggtaa 16180385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 626 - 697
Target Start/End: Complemental strand, 31408732 - 31408661
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||| || |||||   |||||||| |||||| |||| ||||||||||||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaa 31408661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 625 - 692
Target Start/End: Original strand, 39998408 - 39998475
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatatttt 692  Q
    ||||||||||||||||||||  |||| || |||| |  ||||||||||||||||||||||||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 620 - 658
Target Start/End: Complemental strand, 38160699 - 38160661
Alignment:
Q  620 taataggaaaatgttacatgaacaccctttattcctaca 658  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38160699 taataggaaaatgttacatgaacaccctttattcctaca 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 697
Target Start/End: Complemental strand, 24280699 - 24280624
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||| |||||||||||||||| ||||||  ||| |||| |||||| | |||  ||||||||||||    
T  24280699 ataggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaa 24280624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 641 - 699
Target Start/End: Complemental strand, 27393344 - 27393286
Alignment:
Q  641 acaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||| |  ||||||||| | |||||||||||||||||| ||||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagt 27393286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 27535332 - 27535259
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||| |||||| |||  || ||||||||||    
T  27535332 aggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaa 27535259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 697
Target Start/End: Complemental strand, 38160656 - 38160607
Alignment:
Q  648 ttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||| |||||  ||||||||||||||||||||||||||||||| ||||    
T  38160656 ttattcttacactccattgtacaccccatgtattagggatattttagtaa 38160607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 678
Target Start/End: Complemental strand, 47279799 - 47279744
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgt 678  Q
    ||||||||| |||||| || ||||||||||| |||| | |||||||||||||||||    
T  47279799 taggaaaatattacataaataccctttattcatacatcccattgtacaccccatgt 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 33384869 - 33384943
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctc-attgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||| | |||| || |||||| | |||||| || ||||| |||||||| ||||||||||    
T  33384869 aggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaa 33384943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 623 - 699
Target Start/End: Original strand, 30838630 - 30838706
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||    
T  30838630 taggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagt 30838706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 1750414 - 1750488
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagt 1750488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 695
Target Start/End: Original strand, 16096747 - 16096817
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggt 695  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggt 16096817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 33229303 - 33229376
Alignment:
Q  627 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 33229376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 12302354 - 12302279
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||    
T  12302354 aggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagt 12302279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 43335864 - 43335789
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43335864 aggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagt 43335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 621 - 699
Target Start/End: Complemental strand, 43490505 - 43490427
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||||    
T  43490505 aatagaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagt 43490427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 19047158 - 19047231
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagt 19047231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 625 - 697
Target Start/End: Complemental strand, 12415560 - 12415488
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||| ||||||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaa 12415488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 625 - 697
Target Start/End: Complemental strand, 12427620 - 12427548
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||| ||||||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaa 12427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 43114556 - 43114629
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| ||||||||||    
T  43114556 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 43114629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 627 - 697
Target Start/End: Complemental strand, 11825752 - 11825682
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| ||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaa 11825682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 4764827 - 4764754
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||||||   ||||||||||||    
T  4764827 aggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaa 4764754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 677
Target Start/End: Complemental strand, 34817875 - 34817824
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 677  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatg 34817824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 627 - 693
Target Start/End: Complemental strand, 41282072 - 41282006
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||| ||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttg 41282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 693
Target Start/End: Original strand, 16803967 - 16804036
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||| |||||| |||||||| ||||||    
T  16803967 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttg 16804036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 693
Target Start/End: Original strand, 16843249 - 16843318
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||| |||||| |||||||| ||||||    
T  16843249 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttg 16843318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 625 - 693
Target Start/End: Complemental strand, 13780835 - 13780767
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    |||||||||||||| |||||  |||||||  |||||||||||||||||||||  |||||||||||||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttg 13780767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 622 - 697
Target Start/End: Original strand, 18491702 - 18491777
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||||| || ||||||  |||||||||| |||| |||| | | ||||||||||    
T  18491702 ataggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaa 18491777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 966935 - 966877
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtatta 682  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||||||| ||||    
T  966935 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 24185325 - 24185387
Alignment:
Q  172 atcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtaga 234  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||   ||||||||||||||    
T  24185325 atcattagattattccatcaatctcaagactagaaaagtctactcacttatgatcatagtaga 24185387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 625 - 660
Target Start/End: Complemental strand, 42849946 - 42849911
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacc 660  Q
    ||||||||||||||||||||||||||||||||||||    
T  42849946 ggaaaatgttacatgaacaccctttattcctacacc 42849911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 697
Target Start/End: Complemental strand, 6518566 - 6518497
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||| |||| || |||||   ||||||||||||||| |||||||| ||||||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaa 6518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 697
Target Start/End: Complemental strand, 8896688 - 8896611
Alignment:
Q  620 taataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||| |||||||||||||||||||||||||||  |||   |||||||||||| ||  | |||| ||||||||||||    
T  8896688 taatagaaaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaa 8896611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 34895842 - 34895769
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||| ||||||||||||||| |||| ||  |||||  ||||||||||||||| |||||||| || |||||||    
T  34895842 aggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaa 34895769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 694
Target Start/End: Original strand, 42026763 - 42026838
Alignment:
Q  621 aataggaaaatgttacatgaacaccc--tttattcctacacctcattgtacaccccatgtattagggatattttgg 694  Q
    ||||||||||||||||||||||||||  ||||||| ||||   ||||||||| |||  | ||||||||||||||||    
T  42026763 aataggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttgg 42026838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 697
Target Start/End: Complemental strand, 4299518 - 4299448
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||| |||||||||||||| || ||||||  ||||||||| ||||| ||||  || ||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaa 4299448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 693
Target Start/End: Original strand, 7070418 - 7070484
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    ||||||||||||||||||||||||||| |||| | |||||||  | |||| |||| |||| ||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttg 7070484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 14285674 - 14285748
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||| |||||  ||||||||||| || ||||||  ||||||||||| || |||||  |||||||||||||    
T  14285674 taggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaa 14285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 31603507 - 31603621
Alignment:
Q  169 tccatcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagtagatgagggagtagaagatgaagacataaaagtaaat 268  Q
    ||||||||||||| |||   |||||  ||||||||||||| |||||||| | ||||||||||||||  |     || |||||||||||| |||  |||||    
T  31603507 tccatcattagattattttaacaattccaagactagaaaaatctactcacatatgatcatagtagacaaaaacttaaaagatgaagacacaaagataaat 31603606  T
Q  269 gatataaaagtaaat 283  Q
    || ||||||||||||    
T  31603607 gacataaaagtaaat 31603621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 41700297 - 41700335
Alignment:
Q  272 ataaaagtaaatgacagaatgaaaacaaagcgataaaga 310  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  41700297 ataaaagtaaatgaaggaatgaaaacaaagcgataaaga 41700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 1771367 - 1771292
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  1771367 aggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagt 1771292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 33703140 - 33703215
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||    
T  33703140 aggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagt 33703215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 25051692 - 25051767
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  25051692 aggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagt 25051767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 27316813 - 27316739
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagt 27316739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 27550309 - 27550383
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  27550309 ggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagt 27550383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 35017733 - 35017806
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagt 35017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 43949900 - 43949827
Alignment:
Q  627 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagt 43949827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 27864563 - 27864638
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||| |||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  27864563 aggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagt 27864638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 28982923 - 28982848
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||| ||||| ||||||||||||||||||||||    
T  28982923 aggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagt 28982848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Complemental strand, 55966447 - 55966372
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||||    
T  55966447 aggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagt 55966372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 12496956 - 12497030
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagt 12497030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 624 - 693
Target Start/End: Original strand, 28988472 - 28988541
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttg 693  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| ||||||    
T  28988472 aggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttg 28988541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 39631102 - 39631175
Alignment:
Q  627 aaaatgttacatgaacacccttt-attcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagt 39631175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 699
Target Start/End: Complemental strand, 43514784 - 43514712
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||  ||||||||||  |||||||||||| |||||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagt 43514712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 623 - 699
Target Start/End: Complemental strand, 48463552 - 48463476
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||| |||||| ||||||| ||||  |||||||||| ||||||||||||||||||||||||||||    
T  48463552 taggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagt 48463476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 627 - 697
Target Start/End: Complemental strand, 27893940 - 27893870
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||| |||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaa 27893870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 41878407 - 41878480
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||| ||  ||||||||||||||| |||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagt 41878480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 23035979 - 23036054
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||||| || ||||||||||||||| ||||||    
T  23035979 aggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagt 23036054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 628 - 699
Target Start/End: Complemental strand, 23204875 - 23204804
Alignment:
Q  628 aaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| || |||||||||||||||||| ||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagt 23204804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 711959 - 712032
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || ||||||  ||||||||||| ||| |||| ||||||||||||||    
T  711959 aggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaa 712032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 625 - 697
Target Start/End: Complemental strand, 17619252 - 17619180
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||| |||| || ||||||  ||||||||||||||| |||| ||||||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaa 17619180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 627 - 697
Target Start/End: Complemental strand, 3756344 - 3756274
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||| || ||||||  ||||||||||||||| |||| ||||||||| ||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaa 3756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 43735744 - 43735816
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||| ||||||||||| |||||||||||||| |||||| ||||  ||||||||||| ||||||||| |||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagt 43735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 625 - 697
Target Start/End: Complemental strand, 55272476 - 55272404
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||| |||||| || |||||   ||||||||||||||| |||| ||||||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaa 55272404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 32728355 - 32728429
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||| ||| ||||| ||||    
T  32728355 taggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaa 32728429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 960971 - 960898
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||| ||  |||||||| ||||||||||    
T  960971 aggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaa 960898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 625 - 694
Target Start/End: Original strand, 41847971 - 41848040
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttgg 694  Q
    ||||||||||||| ||||| ||||| |||  |||||||||||||||||||||| ||||| || |||||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttgg 41848040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 699
Target Start/End: Original strand, 31680904 - 31680976
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||| | |||||| ||||||| ||||   ||||||||||||| | ||||||||||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagt 31680976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 622 - 697
Target Start/End: Complemental strand, 48435682 - 48435607
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||| ||||||||||||||| |||| ||  |||||  ||||||||||||||| |||||||| || |||||||    
T  48435682 ataggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaa 48435607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 697
Target Start/End: Original strand, 35037007 - 35037077
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||| |||||||||  | |||||   ||||||||||||||| |||| ||||||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaa 35037077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 699
Target Start/End: Original strand, 21687004 - 21687080
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||| ||||||||  |||||| |||| |||| |  |||||||||  ||||||| ||||||    
T  21687004 taggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagt 21687080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 625 - 697
Target Start/End: Complemental strand, 45490413 - 45490341
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||||||||  ||||||  |||| |  |||||||||| ||||||||||||||| ||| ||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaa 45490341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 676
Target Start/End: Original strand, 30189269 - 30189324
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccat 676  Q
    ||||||||||||||||||||||||| |||||||  ||||  ||| |||||||||||    
T  30189269 aataggaaaatgttacatgaacaccatttattcacacactccatcgtacaccccat 30189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 31371696 - 31371790
Alignment:
Q  136 aaaatagagtctagacttgagattgtttaagggtccatcattagataattcccacaatctcaagactagaaaagtctactcatacatgatcatagt 231  Q
    |||||||||| ||||||||   ||| ||| || || |||||||||| ||| | ||| |||||||||||| | |||||||||| |||||||||||||    
T  31371696 aaaatagagtttagacttggcgttgattagggttcaatcattagattatttcaacattctcaagactag-agagtctactcacacatgatcatagt 31371790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 677
Target Start/End: Original strand, 50526086 - 50526141
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatg 677  Q
    ||||||||||||||||| ||||||||||||| ||| ||  | ||||||||||||||    
T  50526086 ataggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 50526141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 46827807 - 46827749
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtatta 682  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||| ||| ||||    
T  46827807 aggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcatta 46827749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 697
Target Start/End: Complemental strand, 49229766 - 49229692
Alignment:
Q  623 taggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||| ||||||| |||||| || ||||||  |||||||||  |||| |||| ||||||| ||||||    
T  49229766 taggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaa 49229692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 667 - 699
Target Start/End: Complemental strand, 51512323 - 51512291
Alignment:
Q  667 tacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||| |||||||||||||||    
T  51512323 tacaccccatgtattagagatattttggtaagt 51512291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 5e-27; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 2614749 - 2614675
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagt 2614675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 22512305 - 22512379
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagt 22512379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 33855143 - 33855069
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagt 33855069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 41334763 - 41334689
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagt 41334689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 7617132 - 7617207
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||| |||||  |||| |||||||||||||||||||||||||||||||||    
T  7617132 aggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagt 7617207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 18033981 - 18034056
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||    
T  18033981 aggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagt 18034056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 33801468 - 33801543
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||||||||||| ||||||    
T  33801468 aggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagt 33801543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 627 - 683
Target Start/End: Complemental strand, 25915085 - 25915029
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattag 683  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattag 25915029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 625 - 697
Target Start/End: Complemental strand, 32473494 - 32473422
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||| |||| |||||||||||||||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaa 32473422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 627 - 697
Target Start/End: Original strand, 5256997 - 5257067
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||| |||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaa 5257067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 624 - 697
Target Start/End: Original strand, 38470578 - 38470651
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    ||||||||||||||| |||||||||||||| ||||   ||||||||||||||||||||| ||||||||||||||    
T  38470578 aggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaa 38470651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 621 - 697
Target Start/End: Original strand, 17208070 - 17208146
Alignment:
Q  621 aataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||| ||||||||||||| || ||||| | ||||||||||||||| |||| ||| ||||||||||    
T  17208070 aataggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaa 17208146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 283
Target Start/End: Original strand, 16766449 - 16766618
Alignment:
Q  115 gattagaataggaactataataaaatagagtctagacttgagattgtttaagggtcca-tcattagataattcccacaatctcaagactagaaaagtcta 213  Q
    ||||| |||| ||||| |||||||||||| ||||| ||||| | ||| || || || | |||||| || |||||||||||  ||||| || | | |||||    
T  16766449 gattaaaataagaactttaataaaatagaatctaggcttgacaatgtctagggatcaaatcattaaattattcccacaataccaagattaaatatgtcta 16766548  T
Q  214 ctcatacatgatcatagtagatgagggagtagaagatgaagacataaaagtaaatgatataaaagtaaat 283  Q
    |||| ||||||||||||||||  |  || || || ||||||||||||| |||||||||| ||||| ||||    
T  16766549 ctcacacatgatcatagtagacaaaagattaaaacatgaagacataaaggtaaatgatagaaaagcaaat 16766618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 697
Target Start/End: Complemental strand, 30622819 - 30622747
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||| |||||| || ||||||  |||||| | |||||| |||| ||||||||||||||    
T  30622819 aggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaa 30622747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 697
Target Start/End: Complemental strand, 39122535 - 39122461
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||| | ||||||||||||| ||||||| |||| || |||  |||||| |||||||||| ||||||||||||    
T  39122535 ataggaaactattacatgaacaccttttattcatacatctaattagacaccc-atgtattaggaatattttggtaa 39122461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 14291 - 14214
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||| ||||||    
T  14291 ataggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagt 14214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 622 - 699
Target Start/End: Complemental strand, 24619 - 24542
Alignment:
Q  622 ataggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||| ||||||    
T  24619 ataggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagt 24542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 626 - 699
Target Start/End: Original strand, 112656 - 112729
Alignment:
Q  626 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagt 112729  T

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Target: scaffold0385 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 624 - 699
Target Start/End: Original strand, 11250 - 11325
Alignment:
Q  624 aggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    |||||||||| |||||||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||||||||    
T  11250 aggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagt 11325  T

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Target: scaffold0157 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 625 - 699
Target Start/End: Complemental strand, 23521 - 23447
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagt 699  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagt 23447  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 627 - 697
Target Start/End: Complemental strand, 45817 - 45747
Alignment:
Q  627 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||||||||||||| || ||||||  |||||||| || |||||||| ||||||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaa 45747  T

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Target: scaffold0100 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 697
Target Start/End: Complemental strand, 35556 - 35484
Alignment:
Q  625 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaa 697  Q
    |||||||||||||| |||||| |||| || ||||||  ||||||||||||||| |||||||| || |||||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaa 35484  T

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