View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16381_low_15 (Length: 281)
Name: NF16381_low_15
Description: NF16381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16381_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 24722403 - 24722163
Alignment:
| Q |
15 |
caaagggaaaggaagagaaaccctaaaaactcacagactgacctggcggagttgttcttcttcatcaccattgctgacttgcatctttgattgatttgaa |
114 |
Q |
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| T |
24722403 |
caaagggaaaggaagagaaaccctaaaaactcacagactgacctggtggagttgttcttcttcatcaccactgctgacttgcatctttgattgatttgaa |
24722304 |
T |
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| Q |
115 |
aaaatcaatcgattaacagtgtgagtgattgaaaccaaacaaagaaccaacacgcgatttcatatttcttatagactcatatccgtattttccacaattt |
214 |
Q |
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| T |
24722303 |
aaaatcaatcgattaacagtctgagtgaatgaaaccaaaaaaagaaccaacatgcgatttcgtatttcttatcgactcatatccgtattttccacaattt |
24722204 |
T |
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| Q |
215 |
ctgtttattgacaaacctatccgtatatattttttatattg |
255 |
Q |
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| T |
24722203 |
ctgtttattgacaaacctatccgtatatattttttatattg |
24722163 |
T |
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