View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16381_low_16 (Length: 252)

Name: NF16381_low_16
Description: NF16381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16381_low_16
NF16381_low_16
[»] chr5 (4 HSPs)
chr5 (1-214)||(29687507-29687720)
chr5 (9-81)||(29712886-29712958)
chr5 (2-80)||(178609-178687)
chr5 (1-75)||(42562740-42562814)
[»] chr4 (20 HSPs)
chr4 (1-90)||(48156836-48156925)
chr4 (1-79)||(45372466-45372544)
chr4 (1-79)||(45366630-45366708)
chr4 (1-68)||(48735724-48735791)
chr4 (1-79)||(48862832-48862910)
chr4 (1-80)||(48170998-48171077)
chr4 (1-79)||(48148094-48148172)
chr4 (2-79)||(48898313-48898390)
chr4 (1-79)||(45385196-45385274)
chr4 (5-79)||(47207525-47207599)
chr4 (1-48)||(7771026-7771073)
chr4 (1-48)||(7789711-7789758)
chr4 (1-48)||(7800259-7800306)
chr4 (1-48)||(7813102-7813149)
chr4 (1-48)||(7822591-7822638)
chr4 (1-52)||(48891027-48891078)
chr4 (1-79)||(48870133-48870211)
chr4 (1-79)||(48885819-48885897)
chr4 (1-45)||(7238129-7238173)
chr4 (9-45)||(7904657-7904693)
[»] chr8 (6 HSPs)
chr8 (1-52)||(15348480-15348531)
chr8 (1-79)||(12199898-12199976)
chr8 (1-79)||(12444326-12444404)
chr8 (2-44)||(4032326-4032368)
chr8 (2-79)||(12194892-12194969)
chr8 (2-79)||(12439320-12439397)
[»] chr3 (3 HSPs)
chr3 (2-111)||(11006372-11006482)
chr3 (2-79)||(11024947-11025024)
chr3 (8-52)||(11015941-11015985)
[»] chr1 (1 HSPs)
chr1 (1-65)||(24322067-24322131)
[»] chr6 (1 HSPs)
chr6 (1-65)||(21980053-21980117)


Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 29687720 - 29687507
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattcaatgggcagatagaggtcttct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29687720 aaaccaagacttacaaacacacttgaagcgtataagagacttcactggtaactttagaaggatttgaatgatcaattcaatgggcagatagaggtcttct 29687621  T
Q  101 tcgtctccatccatgcctcttcctcctttagtttcctgcaccagtttgttacttgtcgttttaacgggttcccatctctgttttatatgttgtcttaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  29687620 tcgtctccatccatgcctcttcctcctttagtttcctgcgccagtttgttactagtcgttttaacgggttcccatctatgttttatatgttgtcttaatt 29687521  T
Q  201 ttagaggactatga 214  Q
    ||||||||||||||    
T  29687520 ttagaggactatga 29687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 29712886 - 29712958
Alignment:
Q  9 acttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattcaat 81  Q
    |||||||||| |||||||| || ||||||||||||||||||||| ||| ||||||||||||||| || |||||    
T  29712886 acttacaaacgcacttgaaacgaataagagacttcaccggtaacattaaaaggatttgaatgattaactcaat 29712958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 178687 - 178609
Alignment:
Q  2 aaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattcaa 80  Q
    |||||||||||||||||||| ||||| || ||||||||||| || |||||    || |||||||| |||||||||||||    
T  178687 aaccaagacttacaaacacatttgaaacgaataagagacttaactggtaagcgaagtaggatttggatgatcaattcaa 178609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42562740 - 42562814
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaa 75  Q
    |||||||||||||||||| || ||||| || |||||||| |||||||||||| ||||  | ||||| ||||||||    
T  42562740 aaaccaagacttacaaacgcatttgaaacgaataagagaattcaccggtaacattagccgtatttggatgatcaa 42562814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 48156836 - 48156925
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattcaatgggcagata 90  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||||||||  || |||||||||||| ||||||||||  ||||||||    
T  48156836 aaaccaagacttacaaacgcacttgaaacgtagaagagacttcaccggtaaccataaaaggatttgaattatcaattcaagtggcagata 48156925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45372466 - 45372544
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||| || |||||||| |||||||||    
T  45372466 aaaccaagacttacaaacacatttgaaacgtataagagacttcaccggcaaccttagtagaatttgaatcatcaattca 45372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45366630 - 45366708
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||| |||||| |||| |||||||| || |||||||||    
T  45366630 aaaccaatacttacaaacgcacttgaaacgtataagagacttcactggtaaccttagtaggatttggatcatcaattca 45366708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 48735724 - 48735791
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaa 68  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||| | ||||| |||||||    
T  48735724 aaaccaagacttacaaacacatttgaaacgaataagagacttcaccggtaacctcagaagaatttgaa 48735791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48862910 - 48862832
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    |||||||||||| ||||| || ||||| || ||||||||||||||||||||| |||| |||||| | ||||||||||||    
T  48862910 aaaccaagacttgcaaacgcatttgaaacgaataagagacttcaccggtaaccttagcaggattaggatgatcaattca 48862832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48170998 - 48171077
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattcaa 80  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||| |||| | || || |||||||  ||||||||||    
T  48170998 aaaccaagacttacaaacacatttgaaacgtagaagagacttcaccgataacctcagcagaatttgaactatcaattcaa 48171077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48148094 - 48148172
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    ||||||||||||||| ||||| ||||| || |||||||||||||| |||||| ||  |||||||||||  |||||||||    
T  48148094 aaaccaagacttacagacacatttgaaacgaataagagacttcactggtaaccttgaaaggatttgaactatcaattca 48148172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 48898390 - 48898313
Alignment:
Q  2 aaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||   | || || |||||||||| |||||||    
T  48898390 aaccaagacttacaaacacacttgaaacgtgtaagagacttcacaggtagactcagcagaatttgaatgaccaattca 48898313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45385196 - 45385274
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    ||||||||||||||||||  | ||||| ||||| |||||||| || |||||| |||| |||||||| || |||||||||    
T  45385196 aaaccaagacttacaaacggatttgaaacgtatgagagacttaactggtaaccttagtaggatttggatcatcaattca 45385274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 47207599 - 47207525
Alignment:
Q  5 caagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    |||||||| ||||||| ||| || ||||||||||||||||||||||||| ||  ||||||   ||||||||||||    
T  47207599 caagacttccaaacactcttaaaacgtataagagacttcaccggtaactataataggattaagatgatcaattca 47207525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7771073 - 7771026
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccgg 48  Q
    |||||||||||||||||| || ||||| | ||||||||||||||||||    
T  7771073 aaaccaagacttacaaacgcatttgaaacatataagagacttcaccgg 7771026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7789758 - 7789711
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccgg 48  Q
    |||||||||||||||||| || ||||| | ||||||||||||||||||    
T  7789758 aaaccaagacttacaaacgcatttgaaacatataagagacttcaccgg 7789711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7800306 - 7800259
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccgg 48  Q
    |||||| || ||||||||||||||||| ||||||||| ||||||||||    
T  7800306 aaaccatgatttacaaacacacttgaaacgtataagatacttcaccgg 7800259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7813149 - 7813102
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccgg 48  Q
    |||||| || ||||||||||||||||| ||||||||| ||||||||||    
T  7813149 aaaccatgatttacaaacacacttgaaacgtataagatacttcaccgg 7813102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7822638 - 7822591
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccgg 48  Q
    |||||| || ||||||||||||||||| ||||||||| ||||||||||    
T  7822638 aaaccatgatttacaaacacacttgaaacgtataagatacttcaccgg 7822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48891078 - 48891027
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaac 52  Q
    |||||||||||||||||| || ||||| |||||||||||||| |||| ||||    
T  48891078 aaaccaagacttacaaacgcatttgaaacgtataagagactttaccgataac 48891027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48870211 - 48870133
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    |||||||||||||||||| || ||||| || |||||||| |||||||||| | | || || |||||||  |||||||||    
T  48870211 aaaccaagacttacaaacgcatttgaaacgaataagagaattcaccggtagcctcagcagaatttgaactatcaattca 48870133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48885897 - 48885819
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    |||||||||||||||||| || ||||| || |||||||| |||||||||| | | || || |||||||  |||||||||    
T  48885897 aaaccaagacttacaaacgcatttgaaacgaataagagaattcaccggtagcctcagcagaatttgaactatcaattca 48885819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7238129 - 7238173
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcac 45  Q
    ||||||||||||||||||||| ||||| |  ||||||||||||||    
T  7238129 aaaccaagacttacaaacacatttgaaacagataagagacttcac 7238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 7904693 - 7904657
Alignment:
Q  9 acttacaaacacacttgaagcgtataagagacttcac 45  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  7904693 acttacaaacacatttgaaacgtataagagacttcac 7904657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15348531 - 15348480
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaac 52  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  15348531 aaaccaagacttacaaacgcatttgaaacgtataagagacttcaccggtaac 15348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 12199976 - 12199898
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    |||||| |||||||||||||| ||||| | || ||||||||||||||| ||| | || |||||||||||||| ||||||    
T  12199976 aaaccatgacttacaaacacatttgaaacataaaagagacttcaccggcaacctcagcaggatttgaatgattaattca 12199898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 12444404 - 12444326
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    |||||| |||||||||||||| ||||| | || ||||||||||||||| ||| | || |||||||||||||| ||||||    
T  12444404 aaaccatgacttacaaacacatttgaaacataaaagagacttcaccggcaacctcagcaggatttgaatgattaattca 12444326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 4032326 - 4032368
Alignment:
Q  2 aaccaagacttacaaacacacttgaagcgtataagagacttca 44  Q
    |||||||| ||||||||||||||||| ||||||||||||||||    
T  4032326 aaccaagatttacaaacacacttgaaacgtataagagacttca 4032368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 12194969 - 12194892
Alignment:
Q  2 aaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    ||||| ||||||||||  || ||||| | || ||||||||||||||| ||| | || |||||||||||||| ||||||    
T  12194969 aaccatgacttacaaatgcatttgaaacataaaagagacttcaccggcaacctcagcaggatttgaatgattaattca 12194892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 12439397 - 12439320
Alignment:
Q  2 aaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    ||||| ||||||||||  || ||||| | || ||||||||||||||| ||| | || |||||||||||||| ||||||    
T  12439397 aaccatgacttacaaatgcatttgaaacataaaagagacttcaccggcaacctcagcaggatttgaatgattaattca 12439320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 11006372 - 11006482
Alignment:
Q  2 aaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattcaatgggcagatagaggtc-ttct 100  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||| ||| | |  | |||||| ||||||||||||   |||||||| ||| |  |||    
T  11006372 aaccatgacttacaaacacacttgaaacgtataagtgacttcaccggcaacctcaacaagatttgtatgatcaattcatgaggcagatacaggccggtct 11006471  T
Q  101 tcgtctccatc 111  Q
    |||||||||||    
T  11006472 tcgtctccatc 11006482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 11024947 - 11025024
Alignment:
Q  2 aaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggatttgaatgatcaattca 79  Q
    ||||| ||||||||||| || ||||| ||||| |||||||||||||||||| | |  | |||||| ||||||||||||    
T  11024947 aaccatgacttacaaacgcatttgaaacgtatgagagacttcaccggtaacctcaacatgatttgtatgatcaattca 11025024  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11015941 - 11015985
Alignment:
Q  8 gacttacaaacacacttgaagcgtataagagacttcaccggtaac 52  Q
    ||||||||||| || ||||| ||||| ||||||||||||||||||    
T  11015941 gacttacaaacgcatttgaaacgtatgagagacttcaccggtaac 11015985  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24322131 - 24322067
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggattt 65  Q
    |||||||||||||||||| || ||||| || ||||||||||||||| | ||| ||||||||||||    
T  24322131 aaaccaagacttacaaacgcatttgaaacgaataagagacttcaccagcaaccttagaaggattt 24322067  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21980053 - 21980117
Alignment:
Q  1 aaaccaagacttacaaacacacttgaagcgtataagagacttcaccggtaactttagaaggattt 65  Q
    ||||||||||||||||||||||||||| |||   |||||||| || ||| || |||| |||||||    
T  21980053 aaaccaagacttacaaacacacttgaaacgtgagagagactttactggttaccttagcaggattt 21980117  T

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