View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16383_low_8 (Length: 312)
Name: NF16383_low_8
Description: NF16383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16383_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 17 - 293
Target Start/End: Complemental strand, 39970951 - 39970677
Alignment:
| Q |
17 |
attctggatgattgttgtttttcaaataacaagaggttctcatatttcaaaccgtgtgattcaaagggatattatttatacaactttgagggttaggttg |
116 |
Q |
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| T |
39970951 |
attctggatgattgttgtttttcaaatgacaagaggttctcatatttcaaaccgtgtgattcaaagggatattatttatacaactttgagggttaggttg |
39970852 |
T |
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| Q |
117 |
atcatgaagcagtagagaatgataagatacttaaataaggaacccgtttgataacaaacttagttctagttctacaagtaaatataacaaccttaatcta |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
39970851 |
atcatgaagcagtagagaatgataagatacttaaataaggaacccgtttgataactcacttagttctagttctagaagtaaatataacaaccttaatcta |
39970752 |
T |
|
| Q |
217 |
gaatgatctataatacattatgttaaggagtaatgttgaatatatgtcttattgttgatagatttctttggtgaatt |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
39970751 |
gaatgatctataatacattatgttaaggagtaatgttga--atatgtcttattgttgatagatttctttggtgaatt |
39970677 |
T |
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