View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16389_low_6 (Length: 453)
Name: NF16389_low_6
Description: NF16389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16389_low_6 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 395; Significance: 0; HSPs: 28)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 13 - 435
Target Start/End: Original strand, 9104789 - 9105211
Alignment:
| Q |
13 |
aaaatttacgatatagcaattggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaata |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9104789 |
aaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaata |
9104888 |
T |
|
| Q |
113 |
tccttcttgatgagaactttatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagagg |
212 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9104889 |
tccttcttgatgagaactttatccctaaactatctgactttggattggcaaagctacatccaatagagaacagcgtcatcacaatgactgctgcaagagg |
9104988 |
T |
|
| Q |
213 |
tacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatg |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9104989 |
tacaattggatatatggctccagaattgttctacaaaaatattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatg |
9105088 |
T |
|
| Q |
313 |
gcaggcaagagaaaaaaccttaaaaccaatgcacaacattcaagtcagatatatttccccttttggatttatgatcaacttagaaaagaggaagaaatcg |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9105089 |
gcaggcaagagaaaaaaccttaaaaccaatgcacaacattcaagtcagatatattttcccttttggatttatgatcaacttagaaaagaggaagaaatcg |
9105188 |
T |
|
| Q |
413 |
atatggaaaatatctcagaggag |
435 |
Q |
| |
|
|||| |||||||||||||||||| |
|
|
| T |
9105189 |
atatagaaaatatctcagaggag |
9105211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 13 - 435
Target Start/End: Original strand, 9096607 - 9097030
Alignment:
| Q |
13 |
aaaatttacgatatagcaattggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaata |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9096607 |
aaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaata |
9096706 |
T |
|
| Q |
113 |
tccttcttgatgagaactttatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagagg |
212 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
9096707 |
tccttcttgatgagaactttatccctaaactatctgactttggattggcaaagctacatccaatagagaacagcgtcatcacaatgactgctgcaagagg |
9096806 |
T |
|
| Q |
213 |
tacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatg |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9096807 |
tacaattggatatatggctccagaattgttctacaaaaatattgggggagtttcctataaagctgatgtttatagctttgggatgcttttgatggagatg |
9096906 |
T |
|
| Q |
313 |
gcaggcaagagaaaaaaccttaaaaccaatgcacaacattcaagtcagatatatttccccttttggatttatgatcaacttag-aaaagaggaagaaatc |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9096907 |
gcaggcaagagaaaaaaccttaaaaccaatgcacaacattcaagttagatatatttccccttttggatttatgatcaacttagaaaaagaggaagaaatc |
9097006 |
T |
|
| Q |
412 |
gatatggaaaatatctcagaggag |
435 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
9097007 |
gatatggaaaatatctcagaggag |
9097030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 13 - 393
Target Start/End: Original strand, 9082337 - 9082717
Alignment:
| Q |
13 |
aaaatttacgatatagcaattggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaata |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9082337 |
aaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccatggatgtgaaatgaagattttacattttgatatcaagccccacaata |
9082436 |
T |
|
| Q |
113 |
tccttcttgatgagaactttatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagagg |
212 |
Q |
| |
|
|| | |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||| |
|
|
| T |
9082437 |
tcttgcttgatgagaactttatccctaaaatatctgactttggattggcaaaactacacccgatagagaatagcgtcatcacaatgactgcagcaagagg |
9082536 |
T |
|
| Q |
213 |
tacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatg |
312 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||| || |||||||| || || ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9082537 |
tacaattggatatatggctcctgagttattctacaaaaatatagggggagtgtcgtacaaggctgatgtttatagttttgggatgcttttgatggagatg |
9082636 |
T |
|
| Q |
313 |
gcaggcaagagaaaaaaccttaaaaccaatgcacaacattcaagtcagatatatttccccttttggatttatgatcaactt |
393 |
Q |
| |
|
||| ||||||| |||||||| || ||||| ||| | |||||||| || | ||||| ||||||||||| |||||||||||| |
|
|
| T |
9082637 |
gcaagcaagaggaaaaacctgaacaccaaggcagagcattcaagccaactttattttcccttttggatatatgatcaactt |
9082717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 32 - 410
Target Start/End: Complemental strand, 8999956 - 8999578
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
8999956 |
ttggagtagctcgtgggattgcttatctccaccatggatgcgaaatgaagattttacattttgatatcaagcctcacaacatccttcttgatgaaaactt |
8999857 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
| || ||| | |||||||| |||||||| |||||| |||| ||||||| ||| | ||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
8999856 |
cacaccaaaagtctctgacttcggattggctaagctatatcccgtggagaatagcattgtcacaatgactgcggcaagaggtaccattggatatatggct |
8999757 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggcaagagaaaaaacc |
331 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
8999756 |
ccagaattgttctataaaaatattgggggagtgtcttataaggctgatgtttatagctttgggatgcttttgatggagatggcaggtaaaaggaaaaacc |
8999657 |
T |
|
| Q |
332 |
ttaaaaccaatgcacaacattcaagtcagatatatttccccttttggatttatgatcaacttagaaaagaggaagaaat |
410 |
Q |
| |
|
| || | | || | |||||||||||| | ||||| || || ||||||||||||||| || || |||||| |||||| |
|
|
| T |
8999656 |
taaatgtccaagcggagcattcaagtcagctttattttcctttatggatttatgatcaatttggacaagagggagaaat |
8999578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 32 - 435
Target Start/End: Complemental strand, 8964805 - 8964402
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||| || |
|
|
| T |
8964805 |
ttggaatagctcgtgggattgcttatcttcaccatggatgcgaaatgaagattttgcattttgatattaagcctcacaacatccttcttgatgagaattt |
8964706 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
| ||| ||| | ||||||||||||||||| |||||| |||| | ||||| ||| | |||||||||| || ||||||||||| ||||||||||||||| |
|
|
| T |
8964705 |
caccccaaaagtctctgactttggattggctaagctatatcctgtagagaatagcattgtcacaatgacagcggcaagaggtaccattggatatatggct |
8964606 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggcaagagaaaaaacc |
331 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| |
|
|
| T |
8964605 |
ccagaattgttctataaaaatattgggggagtgtcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggtaaaaggaaaaacc |
8964506 |
T |
|
| Q |
332 |
ttaaaaccaatgcacaacattcaagtcagatatatttccccttttggatttatgatcaacttagaaaagaggaagaaatcgatatggaaaatatctcaga |
431 |
Q |
| |
|
| || || | || | |||||||||||| | ||||| || || ||||||||||||||| || || |||| | |||||| || || ||| || || |||| |
|
|
| T |
8964505 |
taaatgcccaagcggagcattcaagtcagctttattttcctttatggatttatgatcaatttggacaagaaggagaaatagaaatagaagatgtcacaga |
8964406 |
T |
|
| Q |
432 |
ggag |
435 |
Q |
| |
|
|||| |
|
|
| T |
8964405 |
ggag |
8964402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 32 - 390
Target Start/End: Original strand, 8873885 - 8874243
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||||||||| |||||||||||||||| || || |||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
8873885 |
ttggagtagctcgtgggattgcttatctccatcatggatgtgaaatgaagattttgcattttgatattaagcctcacaacatccttcttgatgagaactt |
8873984 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
|| || ||| | ||||||||||||||||| |||||| |||| ||||||| ||| | ||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
8873985 |
tactccgaaagtctctgactttggattggctaagctatatcctgtggagaatagcattgtcacaatgactgcggcaagaggtaccattggatatatggct |
8874084 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggcaagagaaaaaacc |
331 |
Q |
| |
|
||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| || || ||||||| |
|
|
| T |
8874085 |
ccagaattgttttataaaaatattggtggagtgtcctataaggctgatgtttatagttttgggatgcttttgatggtgatggcaggtaaaaggaaaaacc |
8874184 |
T |
|
| Q |
332 |
ttaaaaccaatgcacaacattcaagtcagatatatttccccttttggatttatgatcaa |
390 |
Q |
| |
|
| || || | || | |||||||||||| | ||||| || || ||||||||||||||| |
|
|
| T |
8874185 |
taaatgcccaagctgagcattcaagtcagctttattttcctttatggatttatgatcaa |
8874243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 29 - 332
Target Start/End: Original strand, 9142685 - 9142988
Alignment:
| Q |
29 |
caattggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaa |
128 |
Q |
| |
|
|||||||||||||| | || ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
9142685 |
caattggagtagctcgaggaattgcttatctccaccatggatgtgaaatgaagatattacattttgatatcaagccccataatattctgcttgatgagaa |
9142784 |
T |
|
| Q |
129 |
ctttatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatg |
228 |
Q |
| |
|
|||||| || || |||||||||||||| | ||||||||| ||||||| ||||| ||| | ||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
9142785 |
ctttattccaaagatatctgactttggactcgcaaagctatatccgattgagaatagcattgtcacaatgactgcagcaagaggtactattggatatatg |
9142884 |
T |
|
| Q |
229 |
gctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggcaagagaaaaa |
328 |
Q |
| |
|
||||| || |||||||||||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||| | || ||||||| |
|
|
| T |
9142885 |
gctccggagttgttctacaaaaatattgggggagtgtcctataaggccgatgtttatagtttcgggatgcttttgatggagatggcaagtaaaagaaaaa |
9142984 |
T |
|
| Q |
329 |
acct |
332 |
Q |
| |
|
|||| |
|
|
| T |
9142985 |
acct |
9142988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 20 - 410
Target Start/End: Complemental strand, 9056866 - 9056476
Alignment:
| Q |
20 |
acgatatagcaattggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttct |
119 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| |||||| || | |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |
|
|
| T |
9056866 |
acgatatttcaattggagtagctcgtgggattgattatctccataatggatgtgaaatgaaaattttgcattttgatatcaagccacacaatatcctact |
9056767 |
T |
|
| Q |
120 |
tgatgagaactttatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaatt |
219 |
Q |
| |
|
||| ||||| ||||| || || |||||||||||||| | ||||||||| |||| || ||| ||| | ||||||||||||| || | ||| |||||| |
|
|
| T |
9056766 |
tgacgagaattttattccaaagatatctgactttggactcgcaaagctatatccaattacgaatagcattgtcacaatgactgcagccaaaggcacaatt |
9056667 |
T |
|
| Q |
220 |
ggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggca |
319 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| ||||| ||||| || |||||||||||||||||||| ||||| |||||||||||||| |||||| ||| |
|
|
| T |
9056666 |
ggatatatggctcctgaattgttttacaaaaatattggtggagtgtcgtataaggctgatgtttatagttttggtatgcttttgatggaaatggcaagca |
9056567 |
T |
|
| Q |
320 |
agagaaaaaaccttaaaaccaatgcacaacattcaagtcagatatatttccccttttggatttatgatcaacttagaaaagaggaagaaat |
410 |
Q |
| |
|
|||| |||||| | || | ||||| |||||||| ||| ||||| |||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
9056566 |
agaggaaaaacatgaacccacatgcagcgcattcaagccagcattattttcccttttggatttatgatcaacttcaaaaagaggcagaaat |
9056476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 49 - 312
Target Start/End: Original strand, 9152259 - 9152521
Alignment:
| Q |
49 |
attgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactttatccc-taaattatct |
147 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| || ||| | | |
|
|
| T |
9152259 |
attgcttatctccaccatggatgtgaaatgaagattttacattttgatatcaagccccacaatattcggttagatgagaactttatcccatagatttt-t |
9152357 |
T |
|
| Q |
148 |
gactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggctccagaattgttctaca |
247 |
Q |
| |
|
||||||||| | ||||||||| ||||| | ||||| ||| | ||| | ||||||| ||||| ||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
9152358 |
gactttggactcgcaaagctatatccgctagagaatagcattgtcata-tgactgcatcaagatgtacaattggatatatggctctagaattgttttaca |
9152456 |
T |
|
| Q |
248 |
aaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatg |
312 |
Q |
| |
|
||| || |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9152457 |
taaatatcgggggagtgtcctataaggccgatgtttatagttttgggatgcttttgatggagatg |
9152521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 32 - 315
Target Start/End: Complemental strand, 9320195 - 9319912
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||||| ||| |||| || |||||| | || || |||||||| ||| | ||||| |||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
9320195 |
ttggagtggctcgtggtatggcttatttacatcaaggatgtgacatgcaaattttgcattttgatatcaagccccataacatccttcttgatgagaactt |
9320096 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
|||||| ||| | || |||||||| | || ||||| |||| | |||| ||| | |||| | ||||| |||||||| |||||||||||||||||| |
|
|
| T |
9320095 |
tatccccaaagtttcagactttggtcttgctaagctttatcctaatgagattagcattgtcactttaactgcagcaagaggaacaattggatatatggct |
9319996 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggca |
315 |
Q |
| |
|
|| ||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||||| || |||||||||||||| |||||| |
|
|
| T |
9319995 |
cctgaattgttctacaaaaatattggaggagtatcctacaaggctgatgtatatagcttcggaatgcttttgatggaaatggca |
9319912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 32 - 308
Target Start/End: Complemental strand, 9350512 - 9350236
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||||| ||| |||| || |||||| | || || |||||||| ||| | ||||| |||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
9350512 |
ttggagtggctcgtggtatggcttatttacatcaaggatgtgacatgcaaattttgcattttgatatcaagccccataacatccttcttgatgagaactt |
9350413 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
|||||| ||| | || |||||||| | || ||||| |||| | |||| ||| | |||| | ||||| |||||||| |||||||||||||||||| |
|
|
| T |
9350412 |
tatccccaaagtttcagactttggtcttgctaagctttatcctaatgagattagcattgtcactttaactgcagcaagaggaacaattggatatatggct |
9350313 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatgga |
308 |
Q |
| |
|
|| || |||||||||||||| ||||| ||||| ||||| ||||||||||| |||||||| || |||||||||||||| |
|
|
| T |
9350312 |
cctgagttgttctacaaaaatattggaggagtatcctacaaggctgatgtatatagcttcggaatgcttttgatgga |
9350236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 32 - 315
Target Start/End: Original strand, 9318107 - 9318390
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||||| ||| |||| ||||||||| | || | |||||||| ||| | || || |||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
9318107 |
ttggagtggctcgtggaattgcttatttgcatgaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactt |
9318206 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
||| || ||| | || |||||||| |||||||||| |||| | || | ||| | |||| | ||||| || ||||| ||||||||||| |||||| |
|
|
| T |
9318207 |
tattcccaaagtttcagactttggtctggcaaagctttatccaaatgacattagcattgtcactttaactgcagctagaggaacaattggatacatggct |
9318306 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggca |
315 |
Q |
| |
|
|| ||||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||||||||||| |||||||||||||| |||||| |
|
|
| T |
9318307 |
cctgaattgttctacaaaaatattggaggagtatcctacaaggccgatgtatatagctttggaatgcttttgatggaaatggca |
9318390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 55 - 390
Target Start/End: Complemental strand, 9399902 - 9399567
Alignment:
| Q |
55 |
tatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactttatccctaaattatctgactttg |
154 |
Q |
| |
|
|||||||| || || ||||| ||| | ||||| ||||||||||| ||||| ||||| ||||||||||| || || || ||||||||| | || ||||||| |
|
|
| T |
9399902 |
tatcttcatcagggttgtgatatgcaaattttgcattttgatattaagcctcacaacatccttcttgacgaaaatttcatccctaaagtttcggactttg |
9399803 |
T |
|
| Q |
155 |
gattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacat |
254 |
Q |
| |
|
| | |||||||| |||| || || || ||| | ||| ||| || |||||||| |||||||| || |||||||| ||| |||||| | |||| || |
|
|
| T |
9399802 |
gtcttgcaaagctttatcctattgacaaaagcattgccactttgatggcagcaagaggaacaattggttacatggctcctgaactgttcttccaaaatat |
9399703 |
T |
|
| Q |
255 |
tgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggcaagagaaaaaaccttaaaaccaatgcacaacattca |
354 |
Q |
| |
|
||||||| | || |||||||||||||| ||||||||||| ||||||||||| || || ||| | | ||||| ||| | || | |||| | |||||| |
|
|
| T |
9399702 |
tgggggaatatcatataaggctgatgtgtatagctttggtatgcttttgattgaaattgcaagtaggagaagaaatttgaattcacatgctgagcattca |
9399603 |
T |
|
| Q |
355 |
agtcagatatatttccccttttggatttatgatcaa |
390 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||| |
|
|
| T |
9399602 |
agtcaactttatttccccttttggatttatgatcaa |
9399567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 9254824 - 9255128
Alignment:
| Q |
11 |
agaaaatttacgatatagcaattggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaa |
110 |
Q |
| |
|
||||||| ||||| ||| | ||||||| ||| ||| ||||||||| | || || ||||| |||||| | ||||| |||||||| ||||||||||| || |
|
|
| T |
9254824 |
agaaaatgtacgagatatctcttggagtggctcatggtattgcttatttacatcaaggatgcgaaatgcaaattttgcattttgacatcaagccccataa |
9254923 |
T |
|
| Q |
111 |
tatccttcttgatgagaactttatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaaga |
210 |
Q |
| |
|
|||||||| ||||||||||||| ||| ||| | || |||||||| | ||| |||| |||| | |||| || | |||| | || || ||||| |
|
|
| T |
9254924 |
catccttctcgatgagaactttaaccccaaagtttcagactttggtcttgcacagctttatccaaatgagattagtattgtcactttaaccgcagcaagg |
9255023 |
T |
|
| Q |
211 |
ggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggaga |
310 |
Q |
| |
|
|| ||||||||||| |||||||| |||||||||||| |||| ||||| ||||| || || ||||| ||||| ||||||||||| ||||||||||| || | |
|
|
| T |
9255024 |
gggacaattggatacatggctcctgaattgttctaccaaaatattggaggagtatcgtacaaggccgatgtatatagctttggaatgcttttgattgaaa |
9255123 |
T |
|
| Q |
311 |
tggca |
315 |
Q |
| |
|
||||| |
|
|
| T |
9255124 |
tggca |
9255128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 197 - 308
Target Start/End: Complemental strand, 8932229 - 8932118
Alignment:
| Q |
197 |
tgactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggat |
296 |
Q |
| |
|
|||||||||||||||| |||||||| || ||||| |||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
8932229 |
tgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaat |
8932130 |
T |
|
| Q |
297 |
gcttttgatgga |
308 |
Q |
| |
|
||| || ||||| |
|
|
| T |
8932129 |
gctcttaatgga |
8932118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 197 - 308
Target Start/End: Complemental strand, 8920824 - 8920713
Alignment:
| Q |
197 |
tgactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggat |
296 |
Q |
| |
|
|||||||||||||||| |||||||| || ||||| ||||| |||||||||||||| ||||| ||| ||||||||||| ||||| ||||||||||| || |
|
|
| T |
8920824 |
tgactgctgcaagaggaacaattggttacatggcaccagagttgttctacaaaaatattggtaaagtctcctataaggccgatgtatatagctttggaat |
8920725 |
T |
|
| Q |
297 |
gcttttgatgga |
308 |
Q |
| |
|
||| |||||||| |
|
|
| T |
8920724 |
gctcttgatgga |
8920713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 8942146 - 8942034
Alignment:
| Q |
196 |
atgactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttggga |
295 |
Q |
| |
|
||||| ||||| |||||||||||||| || ||||| |||||||||||||||||||| ||||| |||||||||||| || ||||| ||||||||||| | |
|
|
| T |
8942146 |
atgaccgctgctagaggtacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaagccgatgtgtatagctttggaa |
8942047 |
T |
|
| Q |
296 |
tgcttttgatgga |
308 |
Q |
| |
|
|||| || ||||| |
|
|
| T |
8942046 |
tgctcttaatgga |
8942034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 308
Target Start/End: Complemental strand, 8956151 - 8956040
Alignment:
| Q |
197 |
tgactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggat |
296 |
Q |
| |
|
|||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
8956151 |
tgacggctgcaagaggaacaattggttacatggctccggaattattctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaat |
8956052 |
T |
|
| Q |
297 |
gcttttgatgga |
308 |
Q |
| |
|
||| || ||||| |
|
|
| T |
8956051 |
gctcttaatgga |
8956040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 9384324 - 9384233
Alignment:
| Q |
226 |
atggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcagg |
317 |
Q |
| |
|
|||||||| ||| ||||||||||||| ||||| ||||| || || ||||||||||| ||||||||||| |||||||||||||| |||||||| |
|
|
| T |
9384324 |
atggctcctgaactgttctacaaaaatattggtggagtgtcttacaaggctgatgtatatagctttggaatgcttttgatggaaatggcagg |
9384233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 9234070 - 9234170
Alignment:
| Q |
226 |
atggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggcaagagaa |
325 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||| || || || |||||||| || || ||||| |||||||||||||| |||||||| ||||||| |
|
|
| T |
9234070 |
atggctcctgaattgttctacaaaaatattggtggagtgtcgtacaaagctgatgtatacagttttggaatgcttttgatggaaatggcaggtaagagaa |
9234169 |
T |
|
| Q |
326 |
a |
326 |
Q |
| |
|
| |
|
|
| T |
9234170 |
a |
9234170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 390
Target Start/End: Original strand, 9432677 - 9433012
Alignment:
| Q |
55 |
tatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactttatccctaaattatctgactttg |
154 |
Q |
| |
|
|||||||| || || ||||| ||| | ||||| ||||||||||| ||||| ||||| |||||||| || || || || ||||||||| | || ||||||| |
|
|
| T |
9432677 |
tatcttcatcagggttgtgatatgcaaattttgcattttgatattaagcctcacaacatccttctggacgaaaatttcatccctaaagtttcggactttg |
9432776 |
T |
|
| Q |
155 |
gattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacat |
254 |
Q |
| |
|
| | |||||||| |||| || || || ||| | ||| |||| || |||||||| |||||||| || |||||||| |||||||||||| |||| || |
|
|
| T |
9432777 |
gtcttgcaaagctttatcctattgacaaaagcattgccactttgacggcagcaagaggaacaattggttacatggctcctgaattgttctaccaaaatat |
9432876 |
T |
|
| Q |
255 |
tgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggcaggcaagagaaaaaaccttaaaaccaatgcacaacattca |
354 |
Q |
| |
|
|||| || | || | ||||| ||||| ||||| ||||| ||||||||||| || || ||| | | |||| ||| | || | |||| | |||||| |
|
|
| T |
9432877 |
tgggagaatatcacacaaggccgatgtgtatagttttggaatgcttttgattgaaatcgcaagtagaagaagaaatttgaattcacatgctgagcattca |
9432976 |
T |
|
| Q |
355 |
agtcagatatatttccccttttggatttatgatcaa |
390 |
Q |
| |
|
||||| | ||||||||||||||||||||||||||| |
|
|
| T |
9432977 |
agtcaactttatttccccttttggatttatgatcaa |
9433012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 305
Target Start/End: Original strand, 9453641 - 9453914
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||||| ||| |||| ||| | |||||||| || || ||||| ||| | ||||| ||||||||||| ||||| ||||| ||||||||||| || || || |
|
|
| T |
9453641 |
ttggagtggctcgtggaatttcatatcttcatcaagggtgtgatatgcaaattttgcattttgatattaagcctcacaacatccttcttgacgaaaattt |
9453740 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
||||||||| | || || ||||| | |||||||| |||| || || || ||| | || | |||| || |||||||| |||||||| || |||||| |
|
|
| T |
9453741 |
catccctaaagtttcagattttggtcttgcaaagctttatcctattgacaatagcattgtcgctttgacagcagcaagaggaacaattggttacatggct |
9453840 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgat |
305 |
Q |
| |
|
|| |||||||||||| |||| |||||| || | || | ||||| ||||| ||||| ||||| |||||| |||| |
|
|
| T |
9453841 |
cctgaattgttctaccaaaatattgggagaatatcacacaaggccgatgtgtatagttttggaatgcttctgat |
9453914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 315
Target Start/End: Original strand, 9486006 - 9486289
Alignment:
| Q |
32 |
ttggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccacaatatccttcttgatgagaactt |
131 |
Q |
| |
|
||||||| ||| |||| ||| | |||||||| || || |||| ||| | ||||| ||||||||||| ||||| ||||| || |||||||| || || || |
|
|
| T |
9486006 |
ttggagtggctcgtggaatttcatatcttcatcaaggctgtggtatgcaaattttgcattttgatattaagcctcacaacattcttcttgacgaaaattt |
9486105 |
T |
|
| Q |
132 |
tatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaagaggtacaattggatatatggct |
231 |
Q |
| |
|
| |||||||| | || |||||||| | |||||||| |||| || || || ||| | ||| |||| || |||||||| ||||| || || |||||| |
|
|
| T |
9486106 |
tgtccctaaagtttcggactttggtcttgcaaagctttatcctattgacaaaagcattgccaccttgacagcagcaagaggaacaatcggttacatggct |
9486205 |
T |
|
| Q |
232 |
ccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggagatggca |
315 |
Q |
| |
|
|| |||||||||||| |||| || || ||| | || || |||||||| | ||||||||||| ||||||||||| || |||||| |
|
|
| T |
9486206 |
cctgaattgttctaccaaaatatcggaggaatatcatacaaggctgacatgtatagctttggaatgcttttgattgaaatggca |
9486289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 9488673 - 9488561
Alignment:
| Q |
202 |
gctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttt |
301 |
Q |
| |
|
||||||||||| || || ||||| ||||| |||||||||||||| || || ||||| ||||| || || || || ||||||||||||||||| ||| | | |
|
|
| T |
9488673 |
gctgcaagaggaactatgggatacatggcaccagaattgttctataagaatattggaggagtatcgtacaaagcagatgtttatagctttggaatgttgt |
9488574 |
T |
|
| Q |
302 |
tgatggagatggc |
314 |
Q |
| |
|
| ||||| ||||| |
|
|
| T |
9488573 |
taatggaaatggc |
9488561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 9098366 - 9098313
Alignment:
| Q |
279 |
tgtttatagctttgggatgcttttgatggagatggcaggcaagagaaaaaacct |
332 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
9098366 |
tgtttatagttttggtatgcttttgatggagatagcaagcaagaggaaaaacct |
9098313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 9464078 - 9463990
Alignment:
| Q |
202 |
gctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctt |
290 |
Q |
| |
|
||||||||||| || || ||||| ||||| ||||| |||||||| || |||||||| ||||| || || || || |||||||||||||| |
|
|
| T |
9464078 |
gctgcaagaggaactatgggatacatggcaccagagttgttctataagaacattggaggagtatcgtacaaagcagatgtttatagctt |
9463990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 11005081 - 11005122
Alignment:
| Q |
274 |
gctgatgtttatagctttgggatgcttttgatggagatggca |
315 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||||||||||| |
|
|
| T |
11005081 |
gctgatgtctatagctttgggatgttgttgatggagatggca |
11005122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 11033232 - 11033191
Alignment:
| Q |
274 |
gctgatgtttatagctttgggatgcttttgatggagatggca |
315 |
Q |
| |
|
|||||||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
11033232 |
gctgatgtttatagttttgggatgttgttgatggagatggca |
11033191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 82 - 325
Target Start/End: Original strand, 15927063 - 15927306
Alignment:
| Q |
82 |
attttacattttgatatcaagccccacaatatccttcttgatgagaactttatccctaaattatctgactttggattggcaaagctacatccgatggaga |
181 |
Q |
| |
|
||||| |||||||| ||||||||||| || |||||||||||||||||||||||||| ||| | || |||||||| | |||||||| |||| | |||| |
|
|
| T |
15927063 |
attttgcattttgacatcaagccccataacatccttcttgatgagaactttatccccaaagtttccgactttggtcttgcaaagctttatcctaatgaga |
15927162 |
T |
|
| Q |
182 |
acagcgtcatcacaatgactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgt |
281 |
Q |
| |
|
|| | |||| | ||||| |||||||| || |||||||| |||||||| ||||| ||||||||||| ||||| |||||||| |||||||| ||||| |
|
|
| T |
15927163 |
ttagtattgtcactttaactgcagcaagaggaacgattggatacatggctcctgaattattctacaaaaatattggaggagtttcgtataaggccgatgt |
15927262 |
T |
|
| Q |
282 |
ttatagctttgggatgcttttgatggagatggcaggcaagagaa |
325 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| | ||||||| |
|
|
| T |
15927263 |
atatagctttggaatgcttttgatggaaatggcaagtaagagaa |
15927306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 315
Target Start/End: Complemental strand, 9159907 - 9159602
Alignment:
| Q |
10 |
aagaaaatttacgatatagcaattggagtagcttgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgatatcaagccccaca |
109 |
Q |
| |
|
|||||||| || || ||| | |||||||| ||| |||| ||||||||| | || || |||||||| ||| | || || |||||||||||||||||||| | |
|
|
| T |
9159907 |
aagaaaatgtatgagatatctattggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccata |
9159808 |
T |
|
| Q |
110 |
atatccttcttgatgagaactttatccctaaattatctgactttggattggcaaagctacatccgatggagaacagcgtcatcacaatgactgctgcaag |
209 |
Q |
| |
|
| || |||||||| |||||||||||||| || | ||||||||||| | |||||||| |||| | || || || | | | | ||||| ||||| |
|
|
| T |
9159807 |
acatacttcttgacgagaactttatccccaaggtttctgactttggtcttgcaaagctttatcctaatgacaatagtattgtaaatttaactgcagcaag |
9159708 |
T |
|
| Q |
210 |
aggtacaattggatatatggctccagaattgttctacaaaaacattgggggagtttcctataaggctgatgtttatagctttgggatgcttttgatggag |
309 |
Q |
| |
|
||| |||||||| ||||||||||| || |||||||||||||| ||||| ||||| || || ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
9159707 |
aggaacaattggttatatggctcccgagttgttctacaaaaatattggtggagtatcatacaaggctgatgtttatagttttggaatgcttttgatggaa |
9159608 |
T |
|
| Q |
310 |
atggca |
315 |
Q |
| |
|
|||||| |
|
|
| T |
9159607 |
atggca |
9159602 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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