View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16391_high_6 (Length: 363)
Name: NF16391_high_6
Description: NF16391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16391_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 19 - 349
Target Start/End: Original strand, 2615945 - 2616275
Alignment:
| Q |
19 |
gatatttgaaataagcatatatgagtaaaatgattgaacaatttggtgctctaggagtaataaggctggttttgacaacaccaactggtcttaaaacttg |
118 |
Q |
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| T |
2615945 |
gatatttgaaataagcatatatgagtaaaatgattgaacaatttggtgctctaggagtaataaggctggttttgacaacaccaactggtcttaaaacttg |
2616044 |
T |
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| Q |
119 |
tatacatttcattgctacatgtattcgctgctcaaaggtcacaaccaacttgcattgcgaaatggtactgaagttgtatatgcaaagtccaaacataggc |
218 |
Q |
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| T |
2616045 |
tatacatttcattgctacatgtattcgctgctcaaaggtcacaaccaacttgcattgcgaaatggtactgaagttgtatatgcaaagtccaaacataggc |
2616144 |
T |
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| Q |
219 |
taagtggtcacatccaatttatttaaagtgacttttcaagtagattgaggttgaattgctattttaaatttaacttcaagggctttataaataccaacgc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2616145 |
taagtggtcacatccaatttatttaaagtgacttttcaagtagattgaggttgaattgctattttaaatttaacttcaagggctttataaataccaacgc |
2616244 |
T |
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| Q |
319 |
ctatcaacattggaacatatcacatattctt |
349 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
2616245 |
ctatcaacattggaacatatcacatattctt |
2616275 |
T |
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