View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16395_high_36 (Length: 264)
Name: NF16395_high_36
Description: NF16395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16395_high_36 |
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Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 31980524 - 31980275
Alignment:
| Q |
1 |
aagccctaattccagatcattgaactggcactacactgagcttgatgatagagacctagaaatcaaaggcagaacacttttcttcgttattgtactcttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31980524 |
aagccctaattccagatcattgaactggcactacactgagcttgatgatagagacctagaaatcaaaggcagaacacttttcttcgttattgtactcttc |
31980425 |
T |
|
| Q |
101 |
tcaattttccttcttgttatcgttctcttcttctacacacgttgggtctgccgctaccatactcacatcaccacgacatactccgcctccatccacgcgc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31980424 |
tcaattttccttcttgttatcgttctcttcttctacacacgttgggtctgccgctaccatactcacatcaccacgacatactccgcctccatccacgcgc |
31980325 |
T |
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| Q |
201 |
cgccagctcaaccacctcaaggattagaccctgctgcaatcaagaaactg |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31980324 |
cgccagctcaaccacctcaaggattagaccctgctgcaatcaagaaactg |
31980275 |
T |
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