View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16395_low_50 (Length: 232)
Name: NF16395_low_50
Description: NF16395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16395_low_50 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 44093076 - 44093279
Alignment:
| Q |
15 |
tacttaaacctcatgacatgagtaatgttattttatagaacaaaaaatatgaaactaaacacaatgtctaagcatgtactttgtctataaagtacatacc |
114 |
Q |
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| T |
44093076 |
tacttaaacctcatgacatgagtaatgttattttatagaacaaaaaatatgaaactaaacacaatgtctaagcatgtactttgtctataaagtacatacc |
44093175 |
T |
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| Q |
115 |
-aaaataattaaggctagtattcaacaaattaagggtgtatatatttgtttgtacaagtttcactgataagtttttcaaaaaagagcttcccattttaat |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
44093176 |
aaaaataattaaggctagtattcaacaaattaagggtgtatatatttgtttgtacaagtttcaccgataagtttttcaaaaaagagcttcccattttaat |
44093275 |
T |
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| Q |
214 |
tact |
217 |
Q |
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|||| |
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| T |
44093276 |
tact |
44093279 |
T |
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