View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16396_high_2 (Length: 236)
Name: NF16396_high_2
Description: NF16396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16396_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 197
Target Start/End: Original strand, 978850 - 979040
Alignment:
| Q |
10 |
agagagaagaatatagagaaagatgaaatctagaagaaaccaag---gtttatgtagggtaacagacaaaagcacatagaaaaagaaaaggtgaatacgc |
106 |
Q |
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| T |
978850 |
agagagaagaatatagagaaaaatgaaatctagaagaaaccaagaaggtttctgtagggtaacagacaaaagcacagagaaaaagaaaaggtgaatacat |
978949 |
T |
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| Q |
107 |
tctgataaagaaatcaataattcttgtagagtacaactgaaagaaagaaacacatataacaacccaggagataaaagattctagcaccagg |
197 |
Q |
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| T |
978950 |
tatgataaagaaatcaataattcttgtagagtacaactgaaagaaagagacacatataagaacccaggagataaaagattctagcaccagg |
979040 |
T |
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