View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16397_high_11 (Length: 237)
Name: NF16397_high_11
Description: NF16397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16397_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 32429872 - 32429657
Alignment:
| Q |
6 |
attttttaagtctacgttaactcgtcattttagggtttcctccttcaaagatgaagaaaagtagtatttcaccatttgttttaaggcaatgaacgatttg |
105 |
Q |
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| T |
32429872 |
attttttaagtctacgttaactcgtcattttagggtttcctccttcaaagatgaagaaaagtagtatttcaccatttgttttaaggcaatgaacgatttg |
32429773 |
T |
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| Q |
106 |
tctaacaaattctattcaagcnnnnnnnagagaaaaagaaaactctttattgttgtagacccacagaagttttaatgcaaataaaaataatgtgaaatgt |
205 |
Q |
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||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32429772 |
tctaacaaattttattcaagctttttttagagaaaaagaaaagtctttattgttgtagacccacagaagttttaatgcaaataaaaataatgtgaaatgt |
32429673 |
T |
|
| Q |
206 |
tgttcaaacatgttac |
221 |
Q |
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||| |||||||||||| |
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| T |
32429672 |
tgtacaaacatgttac |
32429657 |
T |
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