View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16399_high_17 (Length: 253)
Name: NF16399_high_17
Description: NF16399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16399_high_17 |
 |  |
|
| [»] scaffold0257 (1 HSPs) |
 |  |  |
|
| [»] scaffold0922 (1 HSPs) |
 |  |  |
|
| [»] scaffold1147 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0257 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19898 - 19663
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19898 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
19799 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19798 |
atttcttatcaaaaccacatttgcgcacatcttgtagtaactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaa |
19699 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
19698 |
tttcaatagctcagctaggcaattgtaggcataacc |
19663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28187457 - 28187222
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| | ||||||||||| |
|
|
| T |
28187457 |
tgttgtgtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaagcgcgtttttcaatatcatccaacc |
28187358 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28187357 |
attccttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaa |
28187258 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
28187257 |
tttcaatagctcagctaggcagttgtaggcataacc |
28187222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28057983 - 28057748
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||| | ||||||||||| |
|
|
| T |
28057983 |
tgttgagtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaaacgcgtttttcaatatcatccaacc |
28057884 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28057883 |
attccttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaa |
28057784 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
28057783 |
tttcaatagctcagctaggcaattgtaggcataacc |
28057748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28068408 - 28068173
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||| | ||||||||||| |
|
|
| T |
28068408 |
tgttgagtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaaacgcgtttttcaatatcatccaacc |
28068309 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28068308 |
attccttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaa |
28068209 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
28068208 |
tttcaatagctcagctaggcaattgtaggcataacc |
28068173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 17743840 - 17744075
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
17743840 |
tgttgtgtcaaaatatgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcgcgcttttcaacaccatccaacc |
17743939 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| | ||||| ||||| |
|
|
| T |
17743940 |
atttcttatcaaaaggaaatctgcgcacatcttgtaataactcgacaaattcagagttgcttgaacctaacacatccaacacactacgagtttgaaggaa |
17744039 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
17744040 |
tttcaatagctcagctaggcaattgtaggcataacc |
17744075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19045160 - 19045395
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
19045160 |
tgttgtgtcaaaatatgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcgcgcttttcaacaccatccaacc |
19045259 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| | ||||| ||||| |
|
|
| T |
19045260 |
atttcttatcaaaaggaaatctgcgcacatcttgtaataactcgacaaattcagagttgcttgaacctaacacatccaacacactacgagtttgaaggaa |
19045359 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
19045360 |
tttcaatagctcagctaggcaattgtaggcataacc |
19045395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28163447 - 28163212
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
28163447 |
tgttgagtcaaaatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtaaaccaggcaacaaagcgcgcttttcgatatcatccaacc |
28163348 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
||| ||||| ||| |||| |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28163347 |
attccttatgaaatggaaatctgcgtgcatcttgtagtaactcaacaaattcagagtggcttgaacctaacacatccaacacactatgagtttggaggaa |
28163248 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| || ||||| || ||||||| |||||| |
|
|
| T |
28163247 |
tttcaatagctccgctagacaattgtaggtataacc |
28163212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 34 - 236
Target Start/End: Original strand, 8538478 - 8538680
Alignment:
| Q |
34 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
133 |
Q |
| |
|
||||||||||||| |||||||| |||| || |||||||||||||||||||||| ||| ||||||||| | ||||||||||||| |||| |||||||||| |
|
|
| T |
8538478 |
ttttgcaatgcattttgagagaattgtaaatcaggaaacaaagcgcgcttttcaacacgatccaaccaatccttatcaaaaccacattttcgcacatctt |
8538577 |
T |
 |
| Q |
134 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
8538578 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacaatatgagtttggaggaatttcaatagctcagctagacagttgtaggcata |
8538677 |
T |
 |
| Q |
234 |
acc |
236 |
Q |
| |
|
||| |
|
|
| T |
8538678 |
acc |
8538680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 11422022 - 11421787
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
11422022 |
tgttgagtcaaaatgtattttgagttcaacaatttttgcaatgcatcttgagagacttgtaaaccaggaaacaaagcgcgcttttcaacaccatccaacc |
11421923 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
||| || |||||| |||| | ||||||||||||| ||||||||||||| ||| | |||||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
11421922 |
attctttgtcaaaaggaaatctacgcacatcttgtattaactcaacaaatgtagagtttcttgaacctaacacgtctaacacactatgggtctggaggaa |
11421823 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
11421822 |
tttcaatagctcagctaggcaattgtaggcataacc |
11421787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 33 - 236
Target Start/End: Complemental strand, 28152418 - 28152215
Alignment:
| Q |
33 |
tttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatct |
132 |
Q |
| |
|
|||||||||||||| |||||||| |||| || ||||||||||||||||| |||| |||||||||||||| | ||||||||| |||| | ||||||||| |
|
|
| T |
28152418 |
tttttgcaatgcattttgagagaattgtaaatcaggaaacaaagcgcgcatttcaacatcatccaaccactccttatcaaacggaaatctacgcacatct |
28152319 |
T |
 |
| Q |
133 |
tgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcat |
232 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
28152318 |
tgtaataactcaacaaattcagagttgcttgaacctaacacatccaacacactatgagtttgaaggaatttcaatagctctgctaggctgttgtaggcat |
28152219 |
T |
 |
| Q |
233 |
aacc |
236 |
Q |
| |
|
|||| |
|
|
| T |
28152218 |
aacc |
28152215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 34 - 236
Target Start/End: Complemental strand, 27920972 - 27920770
Alignment:
| Q |
34 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
133 |
Q |
| |
|
||||||||||||| || ||||| |||| | || || |||||||||||||||| ||| |||||||||| | |||||||||||| || |||||||||||| |
|
|
| T |
27920972 |
ttttgcaatgcattttcagagaattgtaattcatgagacaaagcgcgcttttcaacaccatccaaccaatctttatcaaaaccacatctgcgcacatctt |
27920873 |
T |
 |
| Q |
134 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
233 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||||| ||| |
|
|
| T |
27920872 |
gtaataaatcaacaaattcagagtggcttgaacctaacacatccaacgcactatgagtttggaggaatcgcaatagctcagctaggcagttgtaggaata |
27920773 |
T |
 |
| Q |
234 |
acc |
236 |
Q |
| |
|
||| |
|
|
| T |
27920772 |
acc |
27920770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 26 - 236
Target Start/End: Complemental strand, 27954949 - 27954739
Alignment:
| Q |
26 |
ccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcg |
125 |
Q |
| |
|
|||||| |||||||||||||| |||||||| |||| | || | |||||||| ||||||| ||| |||||||||| | |||||||||||| || |||| |
|
|
| T |
27954949 |
ccaacagtttttgcaatgcattttgagagaattgtaattcataagacaaagcgtgcttttcaacaccatccaaccaatctttatcaaaaccacatctgcg |
27954850 |
T |
 |
| Q |
126 |
cacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttg |
225 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||| |
|
|
| T |
27954849 |
cacatcttgtaataaatcaacaaattcagagtggcttgaacctaacacatccaacgcactatgagtttggaggaatcgcaatagctcagctaggcagttg |
27954750 |
T |
 |
| Q |
226 |
taggcataacc |
236 |
Q |
| |
|
|||| |||||| |
|
|
| T |
27954749 |
taggaataacc |
27954739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 34 - 235
Target Start/End: Complemental strand, 28038277 - 28038076
Alignment:
| Q |
34 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
133 |
Q |
| |
|
||||||||||||| |||||||| || | || ||||||||||||| |||||||| ||| |||| ||||| | ||||| |||| | || |||||||||||| |
|
|
| T |
28038277 |
ttttgcaatgcattttgagagaattttaaatcaggaaacaaagcacgcttttcgacaccatcaaaccaatctttatcgaaactacatctgcgcacatctt |
28038178 |
T |
 |
| Q |
134 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
233 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
28038177 |
gtaacaactcaacaaattcagtgtggcttgaacctaacacatccaacacactatgcgtttggaggaatttcaatagatcgactaggcagttgtaagcata |
28038078 |
T |
 |
| Q |
234 |
ac |
235 |
Q |
| |
|
|| |
|
|
| T |
28038077 |
ac |
28038076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 236
Target Start/End: Original strand, 27430393 - 27430547
Alignment:
| Q |
82 |
ttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaaca |
181 |
Q |
| |
|
||||| ||| |||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27430393 |
ttttcaacaccatccaaccattccttatcaaaaggaaatctacgcacatcttgtaataactcaacaaattcagagtggcttgaacctaccacatccaaca |
27430492 |
T |
 |
| Q |
182 |
cactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
|| |||| | |||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27430493 |
cattatgtggttggaggaatttcaatagctcagctaggcagttgtaggcataacc |
27430547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 33 - 235
Target Start/End: Complemental strand, 27777307 - 27777105
Alignment:
| Q |
33 |
tttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatct |
132 |
Q |
| |
|
|||||| |||||| ||||||||| |||| | ||| ||||||||| || ||||| ||| |||||||||| | |||||||||||| || |||| |||||| |
|
|
| T |
27777307 |
tttttgtaatgcaacttgagagaattgtatatcagaaaacaaagcacgtttttcaacaccatccaaccaatctttatcaaaaccacatctgcgtacatct |
27777208 |
T |
 |
| Q |
133 |
tgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcat |
232 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||| || |
|
|
| T |
27777207 |
tgtaataactcatcaaactcagagcggcttgaacctaacacatccaacacactatggttttggaggaatttcaatagctcagcaagacagttgtaggaat |
27777108 |
T |
 |
| Q |
233 |
aac |
235 |
Q |
| |
|
||| |
|
|
| T |
27777107 |
aac |
27777105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 34 - 236
Target Start/End: Complemental strand, 30994099 - 30993901
Alignment:
| Q |
34 |
ttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatctt |
133 |
Q |
| |
|
||||||||||||| |||||||| |||| || ||||||| ||||| |||||||| ||| |||||||| | || |||||| |||| | ||| |||| |
|
|
| T |
30994099 |
ttttgcaatgcattttgagagaattgtaaatcaggaaataaagcacgcttttcgacactgtccaaccaat----attgaaaccacatttccacacttctt |
30994004 |
T |
 |
| Q |
134 |
gtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcata |
233 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30994003 |
ctaataactcaacaaattcagagtggcttgaacctaacacatccaacacacaatgcgtttggaggaatttcaatagatcagctagacagttgtaggcata |
30993904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 18078689 - 18078796
Alignment:
| Q |
129 |
atcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtag |
228 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
18078689 |
atcttgtaataactcaacaaattcagaatggcttgaacctaacacatccaacacattatgcgtttggaggaatttcaatagctcagctaggcaattgtag |
18078788 |
T |
 |
| Q |
229 |
gcataacc |
236 |
Q |
| |
|
|||||||| |
|
|
| T |
18078789 |
gcataacc |
18078796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 26203977 - 26204188
Alignment:
| Q |
25 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
124 |
Q |
| |
|
||||| ||||| ||||| |||||||| || |||||| | |||| |||||||| ||| |||| ||| |||||||||| | ||||||||||||||| || |
|
|
| T |
26203977 |
tccaataatttctgcaaggcatcttgtgatacttgtatatcagggaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagctgt |
26204076 |
T |
 |
| Q |
125 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
224 |
Q |
| |
|
|| |||||||||||||||| | ||||||||| ||| ||| ||||| || ||||| ||| ||||||||| ||||||||||||||| |||||||| | || |
|
|
| T |
26204077 |
gcgcatcttgtaataactccagaaattcagagtggaatgagcctaatacttccaatacattatgggttttgaggaatttcaatagttcagctagtaaatt |
26204176 |
T |
 |
| Q |
225 |
gtaggcataacc |
236 |
Q |
| |
|
||||||| |||| |
|
|
| T |
26204177 |
gtaggcacaacc |
26204188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 26109685 - 26109896
Alignment:
| Q |
25 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
124 |
Q |
| |
|
||||| ||||| ||||| |||||||| || |||||| | |||| |||||||| ||| |||| ||| |||||||||| | ||||||||||||||| || |
|
|
| T |
26109685 |
tccaataatttctgcaaggcatcttgtgatacttgtatatcagggaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagctgt |
26109784 |
T |
 |
| Q |
125 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
224 |
Q |
| |
|
|| |||||||||||||||| | ||||||||| ||| ||| ||||| | ||||| | | ||||||||| ||||||||||||||| |||||||| | || |
|
|
| T |
26109785 |
gcgcatcttgtaataactccataaattcagagtggtatgatcctaattcttccaatatattatgggttttgaggaatttcaatagttcagctagtaaatt |
26109884 |
T |
 |
| Q |
225 |
gtaggcataacc |
236 |
Q |
| |
|
||||||| |||| |
|
|
| T |
26109885 |
gtaggcacaacc |
26109896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 65 - 236
Target Start/End: Original strand, 28508432 - 28508603
Alignment:
| Q |
65 |
caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga |
164 |
Q |
| |
|
||||||||||||||||| | || ||| |||||||||| | ||||||||||||||| ||||| ||||||||| |||||| ||||||| ||| |||| || |
|
|
| T |
28508432 |
caggaaacaaagcgcgcctctcaacaccatccaaccaatccttatcaaaaccaaagctgcgcgcatcttgtattaactccacaaatttagagtggcacga |
28508531 |
T |
 |
| Q |
165 |
acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
|| || || ||||||| ||||||||||| |||||||||||||| |||||||| | ||||||||| |||| |
|
|
| T |
28508532 |
ccccaatacttccaacatactatgggtttcaaggaatttcaatagttcagctagtaaattgtaggcacaacc |
28508603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 28137091 - 28136907
Alignment:
| Q |
25 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
124 |
Q |
| |
|
||||| |||||||||| || |||||||| | |||| | ||||||||| ||| ||| |||| ||| ||||||||| | ||||||||||||||| |||| |
|
|
| T |
28137091 |
tccaataatttttgcatggcgtcttgagatatttgtatatcaggaaacatagcccgcctttcgacactatccaaccaatccttatcaaaaccaaagttgc |
28136992 |
T |
 |
| Q |
125 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatag |
209 |
Q |
| |
|
|| ||||| ||| || || ||||||||||| |||| ||| ||||| |||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
28136991 |
gcgcatctagtagtagatccacaaattcagagtggcatgagcctaatacatccaagacactatgagtttcaaggaatttcaatag |
28136907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 236
Target Start/End: Original strand, 26138609 - 26138780
Alignment:
| Q |
65 |
caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga |
164 |
Q |
| |
|
||||||||||||| ||| |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| ||||||||||| ||| || |
|
|
| T |
26138609 |
caggaaacaaagcccgcctttcgacaccatccaaccaatccttatcaaaaccaaagcttcgtgcatcttgtaataactccacaaattcagagtggaatgt |
26138708 |
T |
 |
| Q |
165 |
acctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
|| || || ||||| | ||||||||||| ||||||||||||||| | |||||| |||||||||| |||| |
|
|
| T |
26138709 |
gcccaatacttccaatatactatgggttttgaggaatttcaatagtttagctagtacgttgtaggcacaacc |
26138780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 26232069 - 26232221
Alignment:
| Q |
65 |
caggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttga |
164 |
Q |
| |
|
||||| |||||| |||| |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| |||||||||| ||| ||| |
|
|
| T |
26232069 |
caggacacaaagtgcgcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactcctcaaattcagagtggaatga |
26232168 |
T |
 |
| Q |
165 |
acctaacacatccaacacactatgggtttggaggaatttcaatagatcagcta |
217 |
Q |
| |
|
|| || || |||||||||||||| |||| ||||||||||| ||| ||||||| |
|
|
| T |
26232169 |
gcccaatacttccaacacactatgagttttgaggaatttcagtagttcagcta |
26232221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 28479269 - 28479420
Alignment:
| Q |
85 |
tccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacac |
184 |
Q |
| |
|
|||||| |||||||||| | |||||| |||||||| ||||| |||||||||||||||| ||||||| ||| |||| | || || || |||||||||| |
|
|
| T |
28479269 |
tccacaccatccaaccaatccttatctaaaccaaagctgcgcgcatcttgtaataactccacaaatttagagtggcacggccccaatacttccaacacac |
28479368 |
T |
 |
| Q |
185 |
tatgggtttggaggaatttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| |||||||||||||| || ||||| | ||||||||| |||| |
|
|
| T |
28479369 |
tatgggtttcaaggaatttcaatagttcggctagtaaattgtaggcacaacc |
28479420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 218
Target Start/End: Original strand, 26126481 - 26126655
Alignment:
| Q |
44 |
catcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactc |
143 |
Q |
| |
|
|||||||||||||||| | ||||| |||||| || | |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
26126481 |
catcttgagagacttgcatatcaggacacaaagtgctcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactc |
26126580 |
T |
 |
| Q |
144 |
aacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctag |
218 |
Q |
| |
|
|||||||||| ||| ||| || || || ||||||||||| ||||||| ||| |||||||| || |||||||| |
|
|
| T |
26126581 |
ctcaaattcagagtggaatgaccccaatacttccaacacactgtgggttttgagaaatttcaacagttcagctag |
26126655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 218
Target Start/End: Original strand, 26176532 - 26176706
Alignment:
| Q |
44 |
catcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactc |
143 |
Q |
| |
|
|||||||||| ||||| | ||||| |||||| || | |||| ||| |||||||||| | ||||||||||||||| | || |||||||||||||||| |
|
|
| T |
26176532 |
catcttgagaaacttgcatatcaggacacaaagtgctcctttcgacaccatccaaccaatccttatcaaaaccaaaccttcgtgcatcttgtaataactc |
26176631 |
T |
 |
| Q |
144 |
aacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctag |
218 |
Q |
| |
|
|||||||||| ||| ||| || || || ||||||||||| ||||||| |||||||||||| || |||||||| |
|
|
| T |
26176632 |
ctcaaattcagagtggaatgagcccaatacttccaacacactgtgggttttgaggaatttcaacagttcagctag |
26176706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 27458261 - 27458350
Alignment:
| Q |
105 |
cttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttg |
194 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||||||| |||||||| ||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
27458261 |
cttatcaaaagcaaagctgcgtacatcttgtaataacttaacaaatttagagcggcttgaacccaacacatcaaacacactatgggtttg |
27458350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 27357015 - 27356921
Alignment:
| Q |
25 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaa |
119 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| |
|
|
| T |
27357015 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaa |
27356921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 8549753 - 8549708
Alignment:
| Q |
93 |
atccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaat |
138 |
Q |
| |
|
||||||||| | ||||||||||||| |||||||||||||||||||| |
|
|
| T |
8549753 |
atccaaccaatccttatcaaaaccacatttgcgcacatcttgtaat |
8549708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 8021633 - 8021399
Alignment:
| Q |
2 |
gttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacca |
101 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||||||| |
|
|
| T |
8021633 |
gttgtgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgcgaaccatgaaacaaagcacgcttttcgatatcatccaacca |
8021534 |
T |
 |
| Q |
102 |
tttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaat |
201 |
Q |
| |
|
|| |||||||||| ||| || | ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
8021533 |
ttccttatcaaaaggaaaactgtgtacatcttgtaataactcgataaattcagagaggcttgaacctaacacatccaacacactatgagtttgaaggaat |
8021434 |
T |
 |
| Q |
202 |
ttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||| |
|
|
| T |
8021433 |
ttcaatagctcggctagacagttgtaggcataacc |
8021399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 22400929 - 22400719
Alignment:
| Q |
25 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
124 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| ||| |
|
|
| T |
22400929 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctgc |
22400830 |
T |
 |
| Q |
125 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
224 |
Q |
| |
|
||| || |||| || || ||| |||||||| || ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||| || | |
|
|
| T |
22400829 |
gcaaattgtgtagtagcttaacgaattcagagtgacttgaacctaacacatctagcacactatgggtttggaggaattgtaatagatcagctagacaagt |
22400730 |
T |
 |
| Q |
225 |
gtaggcataac |
235 |
Q |
| |
|
||| ||||||| |
|
|
| T |
22400729 |
gtatgcataac |
22400719 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 22966106 - 22965896
Alignment:
| Q |
25 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
124 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| ||| |
|
|
| T |
22966106 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctgc |
22966007 |
T |
 |
| Q |
125 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagctaggcagtt |
224 |
Q |
| |
|
||| || |||| || || ||| |||||||| || |||||| |||||||||| | ||||||||||||||||||||||| ||||| |||||||| || | |
|
|
| T |
22966006 |
gcaaattgtgtagtagcttaacgaattcagaatgacttgaagctaacacatctagcacactatgggtttggaggaattgtaatagctcagctagacaagt |
22965907 |
T |
 |
| Q |
225 |
gtaggcataac |
235 |
Q |
| |
|
||| ||||||| |
|
|
| T |
22965906 |
gtatgcataac |
22965896 |
T |
 |
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Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 22792633 - 22792443
Alignment:
| Q |
25 |
tccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaaccatttcttatcaaaaccaaatttgc |
124 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | | | | ||||||||| || |||| ||| ||||||||| | ||||||||||||||| | | |
|
|
| T |
22792633 |
tccaacagtttttgcaatgcatcttgagagacttttatatccgaaaacaaagcacgtctttcaacactatccaaccaatccttatcaaaaccaaagctac |
22792534 |
T |
 |
| Q |
125 |
gcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaatttcaatagatcagc |
215 |
Q |
| |
|
||| || |||| || || || |||||||| || ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
22792533 |
gcaaattgtgtagtagcttaatgaattcagagtgacttgaacctaacacatccagcacactatgggtttggaggaattgtaatagctcagc |
22792443 |
T |
 |
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Target: scaffold0922 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0922
Description:
Target: scaffold0922; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 2536 - 2301
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| ||||||||||||||||| || ||||||| |||| ||||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||| |
|
|
| T |
2536 |
tgttgagtcaaaatgtgttttgagtccaaaaaattttgcagcgcattttgagagacttgtaaaccaggaaacaaggcgagcttttcaacaccatccaacc |
2437 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggaggaa |
200 |
Q |
| |
|
||| ||||||||| |||| | |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
2436 |
attctttatcaaaaggaaatctacgcatatcttgtaatagctcaacaaattcagaatggcttgaacctaacacatccaacaggtaatgcttttggaggaa |
2337 |
T |
 |
| Q |
201 |
tttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
2336 |
tttcaatagctcagctagacagttgtaggcataacc |
2301 |
T |
 |
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Target: scaffold1147 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1147
Description:
Target: scaffold1147; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 1070 - 873
Alignment:
| Q |
1 |
tgttgcgtcaagatgtgttttgagtccaacaatttttgcaatgcatcttgagagacttgtgaaccaggaaacaaagcgcgcttttccacatcatccaacc |
100 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||| | | ||||| ||| |||| |||| |
|
|
| T |
1070 |
tgttgagtcaaaatgtgttttaagtccaacaatttttgcaatgtatctagagagacttgtaaactaggaaacaaagtgtgtttttcgacaccatctaacc |
971 |
T |
 |
| Q |
101 |
atttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtttggagg |
198 |
Q |
| |
|
| ||| |||||| ||||| || |||||||||| | ||||||||| |||| ||| | ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
970 |
gatccttgtcaaaagcaaatatgtgcacatcttggattaactcaaccaatttagagttgcttgaacctaacacatccaacacatcatgggtttggagg |
873 |
T |
 |
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Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 236
Target Start/End: Original strand, 8692444 - 8692587
Alignment:
| Q |
93 |
atccaaccatttcttatcaaaaccaaatttgcgcacatcttgtaataactcaacaaattcagattggcttgaacctaacacatccaacacactatgggtt |
192 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||| ||||| ||| || ||| ||||||||||| |||| ||||||||| |||||||| |||||||| ||| |
|
|
| T |
8692444 |
atccaaccaatccttatcaaaaccaaagttgcgcgcatctagtagtagctccacaaattcagagtggcatgaacctaatacatccaagacactatgagtt |
8692543 |
T |
 |
| Q |
193 |
tggaggaatttcaatagatcagctaggcagttgtaggcataacc |
236 |
Q |
| |
|
| |||||||||||||| ||||| || ||||||||||| |||| |
|
|
| T |
8692544 |
tcaaggaatttcaatagctcagccagtaagttgtaggcacaacc |
8692587 |
T |
 |
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