View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1639_high_21 (Length: 267)
Name: NF1639_high_21
Description: NF1639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1639_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 45685391 - 45685133
Alignment:
| Q |
1 |
cgttggaaatcctgatccccattcgcgctacgattccatctaatcgagacacgattcctttttatcgattcttcaataacttcatcaccaaattttgaac |
100 |
Q |
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| T |
45685391 |
cgttggaaatcctaatccccattcgcactacgattccatctaatcgagacacgattcctttttatcgattcttcaataacttcatcaccaaattttgaac |
45685292 |
T |
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| Q |
101 |
caagttcaacacaaaagaacaagatatttatacgtaaatatcgacaaagctatgactacatgtat-------acgttagtgttatacaccaaacatgcat |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
45685291 |
caagttcaacacaaaagaacaagatatttatacgtaaatatcgacaaagctatgactacatgtatcgatttcacgttagtgttatacaccaaacatgcat |
45685192 |
T |
|
| Q |
194 |
tcaacgtgaagtgtagattactaatgcgtaatgcctattagaatctctaaatagttcat |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45685191 |
tcaacgtgaagtgtagattactaatgcgtaatgcctattagaatctctaaatagttcat |
45685133 |
T |
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