View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1639_low_33 (Length: 229)

Name: NF1639_low_33
Description: NF1639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1639_low_33
NF1639_low_33
[»] chr6 (17 HSPs)
chr6 (16-214)||(4602421-4602619)
chr6 (84-200)||(4299194-4299310)
chr6 (20-214)||(4617654-4617848)
chr6 (104-200)||(4259547-4259643)
chr6 (77-214)||(4592863-4593000)
chr6 (74-214)||(4564343-4564483)
chr6 (84-200)||(4622783-4622899)
chr6 (71-200)||(4255981-4256113)
chr6 (84-175)||(4626619-4626710)
chr6 (104-202)||(4266559-4266657)
chr6 (84-158)||(4470488-4470562)
chr6 (16-158)||(4514426-4514568)
chr6 (104-201)||(4481335-4481432)
chr6 (94-158)||(4561189-4561253)
chr6 (94-158)||(4574993-4575057)
chr6 (58-158)||(4458280-4458380)
chr6 (94-202)||(4506498-4506606)
[»] chr3 (1 HSPs)
chr3 (18-214)||(1281746-1281942)
[»] chr5 (2 HSPs)
chr5 (104-193)||(24107025-24107114)
chr5 (104-202)||(24103640-24103738)
[»] scaffold0477 (1 HSPs)
scaffold0477 (84-200)||(4062-4178)
[»] chr7 (1 HSPs)
chr7 (104-200)||(3087063-3087159)
[»] scaffold0288 (1 HSPs)
scaffold0288 (97-200)||(3104-3207)
[»] scaffold0199 (1 HSPs)
scaffold0199 (19-212)||(97-291)
[»] chr8 (2 HSPs)
chr8 (19-212)||(1674860-1675054)
chr8 (60-200)||(20863192-20863332)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 4602619 - 4602421
Alignment:
Q  16 acagatccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagactctattattcttttgaatacttacaatgaacttgaga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4602619 acagatccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagactctactattcttttgaatacttacaatgaacttgaga 4602520  T
Q  116 gtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaaattcatcaattgg 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4602519 gtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgcattcattattaaatcaaactccacaaattcatcaattgg 4602421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 4299194 - 4299310
Alignment:
Q  84 tattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcatta 183  Q
    |||| |||| ||||||||  |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  4299194 tattgtttttaatacttatgatgaacttgagagtgatgtaatgaatgctctctattctatgttcccttctttatatactattggacctttaccttcatta 4299293  T
Q  184 ttaaatcaaactccaca 200  Q
    |||||||||||||||||    
T  4299294 ttaaatcaaactccaca 4299310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 4617848 - 4617654
Alignment:
Q  20 atccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagactctattattcttttgaatacttacaatgaacttgagagtga 119  Q
    ||||||||||||||||| ||||||||||| | ||| |||||||| || |||| | |||| ||| ||||||||||||||||| ||||||||||||||||||    
T  4617848 atccaaatgatattatgttagaattctttatagaagttgcagatcgagttaacaaagacactactattcttttgaatactttcaatgaacttgagagtga 4617749  T
Q  120 tgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaaattcatcaattgg 214  Q
    |||||| ||||| || |  || |   | |||||| | ||| | || || ||||| |||||||||||||| |||||||||||||||||||||||||    
T  4617748 tgtaataaatgctctctcctccacaattccttctatttatccgattggccctttaccttcattattaaaacaaactccacaaattcatcaattgg 4617654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 4259547 - 4259643
Alignment:
Q  104 atgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccaca 200  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  4259547 atgaacttgagagtgatgtaatgaatgtgctctattctatgttcccttctttatatgctattggacctttaccttcattattaaatcaaactccaca 4259643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 4593000 - 4592863
Alignment:
Q  77 actctattattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgcc 176  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||| ||||| || |  |||||||| |||||| | ||  | || || ||||| ||    
T  4593000 actctactattattttgaatactttcaatgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttacc 4592901  T
Q  177 ttcattattaaatcaaactccacaaattcatcaattgg 214  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  4592900 ttcattattaaaccaaactccacaaatccatcaattgg 4592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 214
Target Start/End: Complemental strand, 4564483 - 4564343
Alignment:
Q  74 gagactctattattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggaccttt 173  Q
    |||||||||  ||| |||||||||||| | |||||||| ||||||||||||| ||||| || |  |||||||| |||||| | ||  | || || |||||    
T  4564483 gagactctacaattgttttgaatactttccatgaactttagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggcccttt 4564384  T
Q  174 gccttcattattaaatcaaactccacaaattcatcaattgg 214  Q
     |||||||||||||| |||||||||||||||||||||||||    
T  4564383 accttcattattaaaccaaactccacaaattcatcaattgg 4564343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 4622899 - 4622783
Alignment:
Q  84 tattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcatta 183  Q
    |||| |||| |||||||| ||||||||||||| |||||  |||||||| || ||||| |||||||| ||||| |||||  | |||||||| |||||||||    
T  4622899 tattatttttaatacttataatgaacttgagactgatgcgatgaatgcgctctattcaatgttcccatctttgtataccgttggacctttaccttcatta 4622800  T
Q  184 ttaaatcaaactccaca 200  Q
    |||||||||||||||||    
T  4622799 ttaaatcaaactccaca 4622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 4255981 - 4256113
Alignment:
Q  71 atagagactctattattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatatt---ctatgttcccttctttatatactatcgg 167  Q
    |||||| ||||  |||| |||| || ||||| |||||||||||||| |||||| ||||||| || ||||   |||||||| ||| ||| ||||| || ||    
T  4255981 atagagcctctgctattgtttttaacacttataatgaacttgagagcgatgtattgaatgctctctattattctatgttctcttgtttgtataccattgg 4256080  T
Q  168 acctttgccttcattattaaatcaaactccaca 200  Q
    |||||| ||||||||||||||||||||||||||    
T  4256081 acctttaccttcattattaaatcaaactccaca 4256113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 4626710 - 4626619
Alignment:
Q  84 tattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgc 175  Q
    |||| |||| || |||||| ||||||||||| |||||||||||||||| || ||||||| ||||| |||| ||||||| || ||||||||||    
T  4626710 tattgttttcaacacttacgatgaacttgagggtgatgtaatgaatgcgctctattctacgttcctttctgtatataccattggacctttgc 4626619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 4266559 - 4266657
Alignment:
Q  104 atgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaaa 202  Q
    ||||||||||||||||||| |||||||| || || ||||||||||||||| |||| || || || || ||  |||| || |||||||||| ||||||||    
T  4266559 atgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaa 4266657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 4470562 - 4470488
Alignment:
Q  84 tattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttata 158  Q
    |||| ||||||||||||  ||||||||||| |||||||| ||||||| ||| |||||||| ||||||||| ||||    
T  4470562 tattgttttgaatacttctaatgaacttgaaagtgatgttatgaatgaactctattctatattcccttctctata 4470488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 4514426 - 4514568
Alignment:
Q  16 acagatccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagactctattattcttttgaatacttacaatgaacttgaga 115  Q
    |||||| | |||||| | ||| |||||||  | |||||||| | ||||||| || ||||||  |||  |||| |||| |||||||  ||||| |||||||    
T  4514426 acagatgctaatgatttgatgttagaatttatctttgaaatggtagatagacttcatagagcttctgctatttttttaaatacttctaatgatcttgaga 4514525  T
Q  116 gtgatgtaatgaatgcactatattctatgttcccttctttata 158  Q
    ||||||| |||||||| || ||||||||| |||||||| ||||    
T  4514526 gtgatgttatgaatgctctttattctatgctcccttctctata 4514568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 4481432 - 4481335
Alignment:
Q  104 atgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaa 201  Q
    ||||||||||||||||||| |||||| | || |||||||| ||||||||| |||| || || || || ||| |||| || |||||||||| |||||||    
T  4481432 atgaacttgagagtgatgttatgaattctctctattctatattcccttctctatacaccattggtccattggcttcttttttaaatcaaagtccacaa 4481335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 4561253 - 4561189
Alignment:
Q  94 aatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttata 158  Q
    |||||||  |||||||||||||||||||| ||||||||  | |||||||||||||||||| ||||    
T  4561253 aatacttctaatgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctata 4561189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 4575057 - 4574993
Alignment:
Q  94 aatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttata 158  Q
    |||||||  |||||||||||||||||||| ||||||||  | |||||||||||||||||| ||||    
T  4575057 aatacttctaatgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctata 4574993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 4458380 - 4458280
Alignment:
Q  58 gcagatagatttaatagagactctattattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttat 157  Q
    |||||||||| | |||||| ||||  |||| || | |||||||   ||||||||||||||||||| |||||| | || || ||||||||||||||| |||    
T  4458380 gcagatagatgtcatagagcctcttctattgttatcaatacttcttatgaacttgagagtgatgttatgaatactctctactctatgttcccttctatat 4458281  T
Q  158 a 158  Q
    |    
T  4458280 a 4458280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 4506606 - 4506498
Alignment:
Q  94 aatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaa 193  Q
    |||||||  ||||||||||||||| ||||  ||||||| ||  ||  |||||| |||||| |||| ||||| || |||||  |||||||  |||||||||    
T  4506606 aatacttctaatgaacttgagagtaatgttctgaatgctcttgatattatgtttccttctctatacactattggccctttaacttcatttgtaaatcaaa 4506507  T
Q  194 ctccacaaa 202  Q
     ||||||||    
T  4506506 gtccacaaa 4506498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 1281942 - 1281746
Alignment:
Q  18 agatccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagactctattattcttttgaatacttacaatgaacttgagagt 117  Q
    ||||| ||| ||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1281942 agatcgaaacgatattatgttagaattctttattgaaatggcagatagagttaatagagactctactattcttttgaatactttcaatgaacttgagagt 1281843  T
Q  118 gatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaaattcatcaattgg 214  Q
    |||||||| ||||| || |  |||||  | |||||| | ||  | || || ||||| |||||||||||||| |||||||||||||||||||||||||    
T  1281842 gatgtaataaatgctctctcctctataattccttctgtttacccgattggccctttaccttcattattaaaccaaactccacaaattcatcaattgg 1281746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 24107114 - 24107025
Alignment:
Q  104 atgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaa 193  Q
    |||||||||||||||||||||||||| | || |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  24107114 atgaacttgagagtgatgtaatgaatacgctctattctatgttcccttttttatatactattggacctttaccttcattattaaatcaaa 24107025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 24103738 - 24103640
Alignment:
Q  104 atgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaaa 202  Q
    ||||||||||||||||||| |||||||| || || ||||||||||||||| |||| || || || || ||  |||| || |||||||||| ||||||||    
T  24103738 atgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaa 24103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 4062 - 4178
Alignment:
Q  84 tattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcatta 183  Q
    |||| |||| || |||||| ||||||||||||| | |||| ||||||| || |||||||||||||||||||||||||| || ||||||||  ||||||||    
T  4062 tattgttttcaacacttacgatgaacttgagagcggtgtattgaatgctctctattctatgttcccttctttatataccattggacctttaacttcatta 4161  T
Q  184 ttaaatcaaactccaca 200  Q
    |||||||||||||||||    
T  4162 ttaaatcaaactccaca 4178  T

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Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 3087159 - 3087063
Alignment:
Q  104 atgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccaca 200  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| || ||||| || |||||| || ||||||||||| ||||    
T  3087159 atgaacttgagagtgatgtaatgaatgcgctatattctgtgttcccttcattatataccattggaccattaccttcactactaaatcaaacttcaca 3087063  T

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Target: scaffold0288 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 3104 - 3207
Alignment:
Q  97 acttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactc 196  Q
    ||||| ||||||||||||||||||||| ||||||| ||  | ||||||||||| || ||||| | ||||||||| || ||||||||||||| ||||||||    
T  3104 acttataatgaacttgagagtgatgtactgaatgcgctccactctatgttcccatcattatacagtatcggaccattaccttcattattaagtcaaactc 3203  T
Q  197 caca 200  Q
    ||||    
T  3204 caca 3207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 291 - 97
Alignment:
Q  19 gatccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagactctattattcttttgaatacttacaatgaacttgagagtg 118  Q
    |||||||||||||||||| |||| || ||  ||||  | || |||| | || | ||||||||||  ||| |||||||||||| |||||||||||||||||    
T  291 gatccaaatgatattatgttagactttttaattgatgtcgctgataaagttcacagagactctacaattattttgaatactttcaatgaacttgagagtg 192  T
Q  119 atgtaatgaatgcact-atattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaaattcatcaatt 212  Q
    ||||||| |  || ||  |  ||| |||| |||||| | ||  | || || ||||| |||||||||||||| |||||||||||||||||||||||    
T  191 atgtaataaccgctctcctcctctttgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattcatcaatt 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 1675054 - 1674860
Alignment:
Q  19 gatccaaatgatattatggtagaattcttttttgaaattgcagatagatttaatagagactctattattcttttgaatacttacaatgaacttgagagtg 118  Q
    |||||||||||||||||| |||| || ||  ||||  | || |||| | || | ||||||||||  ||| |||||||||||| |||||||||||||||||    
T  1675054 gatccaaatgatattatgttagactttttaattgatgtcgctgataaagttcacagagactctacaattattttgaatactttcaatgaacttgagagtg 1674955  T
Q  119 atgtaatgaatgcact-atattctatgttcccttctttatatactatcggacctttgccttcattattaaatcaaactccacaaattcatcaatt 212  Q
    ||||||| |  || ||  |  ||| |||| |||||| | ||  | || || ||||| |||||||||||||| |||||||||||||||||||||||    
T  1674954 atgtaataaccgctctcctcctctttgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaattcatcaatt 1674860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 200
Target Start/End: Original strand, 20863192 - 20863332
Alignment:
Q  60 agatagatttaatagagactctattattcttttgaatacttacaatgaacttgagagtgatgtaatgaatgcactatattctatgttcccttctttatat 159  Q
    |||||||||| | |||| ||||  |||| |||| ||||||| |||||| |||||||||||||| |||||||  || |||||||||||||||||| ||||     
T  20863192 agatagatttcacagagcctctgctattgttttcaatactttcaatgagcttgagagtgatgttatgaatgttctctattctatgttcccttctctatac 20863291  T
Q  160 actatcggacctttgccttcattattaaatcaaactccaca 200  Q
    || || || |||||   ||| || |||||||||| ||||||    
T  20863292 accattggcccttttgtttcttttttaaatcaaagtccaca 20863332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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