View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16400_high_8 (Length: 253)
Name: NF16400_high_8
Description: NF16400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16400_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 40736051 - 40736282
Alignment:
| Q |
15 |
tcattagctacgggccggttacaccgaagtagaactcagttataaaagggttacaaaaaatgtactcaaggaaaacttcagacatatagcttagggcgtg |
114 |
Q |
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| T |
40736051 |
tcattagttacgggccggttacaccgaagtagaactcagttataaaagggttacaaaaaatgtactcaaggaaaacttcagacatatagcttagggcgtg |
40736150 |
T |
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| Q |
115 |
t--atacctgcgaggatttgcaaggttacatcagaaaaaataatatagaggtaccgaattgaaagaaaaaatgggcatgtcggagaaggatgtgcttgta |
212 |
Q |
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| T |
40736151 |
tgtatacctgcgaggacttgcaaggttacatcagaaaaaataatatagaggtaccgaattgaaagaaaaaatgggcatgtcggagaaggatgtgcttgta |
40736250 |
T |
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| Q |
213 |
tttgctgttattcctatcgtatagttgatgat |
244 |
Q |
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| T |
40736251 |
tttgctgttattcctatcgtatagttgatgat |
40736282 |
T |
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