View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16401_low_25 (Length: 213)
Name: NF16401_low_25
Description: NF16401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16401_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 34863874 - 34863679
Alignment:
| Q |
1 |
tcctctaacgacgccgtttctgctccaactattcccctctatcgctctgctccgccgcttgaagttcgactcgaagatttcgaatccttctccatcgatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
34863874 |
tcctctaacgacgccgtttctgctccaactattcccctctatcgctctgctccgccgcttgaagttcgactcgaagatttcgaatccttcgccatcgatc |
34863775 |
T |
|
| Q |
101 |
gtctcagaggtactaatcgcgttctgcttcttcaatttccatggatctgttctatttgtaaccacatgcttctatttctccatgttttcgttccta |
196 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34863774 |
gtctcagaggtactaatcgcgttctgcttcttcaatttccatggatctgttctatttgtaaccacatgcttctatttctccatgttttcgttccta |
34863679 |
T |
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