View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16402_high_7 (Length: 378)
Name: NF16402_high_7
Description: NF16402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16402_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 58 - 369
Target Start/End: Original strand, 2617770 - 2618080
Alignment:
| Q |
58 |
gccaaattgaagactaacttatttgtagatgatgatgagttgtttagtcattgggatcaatagaaaacacaagttaacctactcaaaatgtagaaataga |
157 |
Q |
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| T |
2617770 |
gccaaattgaagactaacttatttgtagatgatgatgagttgtttagtcattgggatcaatagaaaacacaagttaacctactcaaaatgtagaaataga |
2617869 |
T |
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| Q |
158 |
tacccaatggttttattcatttgctatttatggttttaatgtagccccacgaaagcccgacattaaaatattagaaatttagactttttcatagattgga |
257 |
Q |
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| T |
2617870 |
tacccaatggttt-attcatttgctatttatggttttaatgtagccccacgaaagcccgacattaaaatattagaaatttagactttttcatagattgga |
2617968 |
T |
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| Q |
258 |
aatttagacgtttctttaacaaattgtgttgtacaagtactagtagattatctatcaaattcattcattaatttcattcaaccattgatactccaattat |
357 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2617969 |
aatttagacgtttctttaacaaattgtgttgtacaagtactagtagattatctatcaaattcattcattaatttcattcaaccattgatactccaattat |
2618068 |
T |
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| Q |
358 |
atatagaataat |
369 |
Q |
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|||||||||||| |
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| T |
2618069 |
atatagaataat |
2618080 |
T |
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