View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16402_low_12 (Length: 337)
Name: NF16402_low_12
Description: NF16402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16402_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 18 - 327
Target Start/End: Original strand, 6027456 - 6027765
Alignment:
| Q |
18 |
aaaactaaaacaaatacaaatcaaaatccagatcatacttaatggtacagtctccaatgaatgaaccatctttaatttcaccattttgggcaacattagg |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
6027456 |
aaaactaaaacaaatacaaatcaaaatccagatcatacataatggcacagtctccaatgaaagaaccatctttaatttcaccattttgggcaacattagg |
6027555 |
T |
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| Q |
118 |
tataggtcaatattcacttttacacattcgttaaaatctgttctgtttttgttctcttacatagacaccatttgggtagaggcaaagtctatgatagctt |
217 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6027556 |
cataggttaatattcacttttacacattcgttaaaatctgttctgtttttgttctcttacatagacaccatttgggtagaggcaaagtctatgatagctt |
6027655 |
T |
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| Q |
218 |
agtgcctcgattcgaagctactaaggatacaaaacaaaacatgatcctggtattatctcaaagtttatagccaagagtccaaaaccattgctattaaacc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6027656 |
agtgcctcgattcgaagctactaaggatacaaaacaaaacatgatcctggtattatctcaaagtttatagccaagagtccaaaaccattgctattaaacc |
6027755 |
T |
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| Q |
318 |
tgtgttcatc |
327 |
Q |
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|||||||||| |
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| T |
6027756 |
tgtgttcatc |
6027765 |
T |
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