View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16404_low_4 (Length: 399)

Name: NF16404_low_4
Description: NF16404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16404_low_4
NF16404_low_4
[»] chr1 (41 HSPs)
chr1 (181-399)||(17023518-17023734)
chr1 (201-374)||(27675331-27675503)
chr1 (181-363)||(20177690-20177872)
chr1 (181-299)||(16657151-16657269)
chr1 (182-302)||(19603621-19603741)
chr1 (181-396)||(17609441-17609657)
chr1 (181-299)||(38033298-38033416)
chr1 (180-302)||(41219476-41219599)
chr1 (181-302)||(13376472-13376592)
chr1 (181-286)||(20955070-20955175)
chr1 (290-374)||(16646561-16646644)
chr1 (219-341)||(22829000-22829121)
chr1 (218-399)||(51627183-51627365)
chr1 (289-398)||(35521838-35521946)
chr1 (219-320)||(16646462-16646563)
chr1 (181-302)||(37233469-37233595)
chr1 (294-374)||(16657292-16657371)
chr1 (289-399)||(27329256-27329364)
chr1 (289-399)||(44034483-44034590)
chr1 (284-351)||(49968280-49968346)
chr1 (289-374)||(24568305-24568387)
chr1 (220-286)||(36355921-36355987)
chr1 (291-374)||(22228425-22228505)
chr1 (291-374)||(20254936-20255017)
chr1 (324-399)||(41219352-41219427)
chr1 (182-284)||(22142994-22143096)
chr1 (290-363)||(19603757-19603829)
chr1 (290-399)||(35055395-35055502)
chr1 (290-363)||(37233381-37233453)
chr1 (291-374)||(22238359-22238439)
chr1 (289-399)||(21860646-21860753)
chr1 (181-319)||(49996878-49997016)
chr1 (289-374)||(7640496-7640578)
chr1 (289-394)||(20931954-20932056)
chr1 (290-396)||(41212666-41212770)
chr1 (291-374)||(18059318-18059397)
chr1 (290-363)||(20954966-20955038)
chr1 (290-363)||(36355817-36355889)
chr1 (290-399)||(44320267-44320374)
chr1 (181-319)||(8537519-8537655)
chr1 (181-319)||(8602758-8602894)
[»] chr7 (53 HSPs)
chr7 (181-372)||(13378044-13378234)
chr7 (181-302)||(13389869-13389990)
chr7 (181-399)||(16914443-16914662)
chr7 (181-374)||(34240741-34240941)
chr7 (181-360)||(48357156-48357335)
chr7 (181-299)||(17223550-17223669)
chr7 (289-374)||(16569522-16569606)
chr7 (289-374)||(16596056-16596140)
chr7 (221-320)||(9081158-9081257)
chr7 (292-399)||(16920188-16920294)
chr7 (290-374)||(12247636-12247719)
chr7 (181-302)||(16920048-16920170)
chr7 (218-300)||(49047294-49047375)
chr7 (290-399)||(9081255-9081363)
chr7 (289-399)||(13862444-13862552)
chr7 (181-320)||(9611821-9611961)
chr7 (181-320)||(9839392-9839532)
chr7 (238-302)||(14268513-14268577)
chr7 (291-374)||(18253406-18253487)
chr7 (181-319)||(31501684-31501822)
chr7 (284-399)||(44865858-44865971)
chr7 (291-374)||(48622236-48622317)
chr7 (222-288)||(13275327-13275393)
chr7 (290-374)||(13390006-13390089)
chr7 (290-374)||(14268414-14268497)
chr7 (291-399)||(47480560-47480666)
chr7 (291-374)||(16419112-16419193)
chr7 (289-374)||(15928183-15928265)
chr7 (291-363)||(7823325-7823394)
chr7 (291-363)||(7830636-7830705)
chr7 (291-363)||(12899910-12899979)
chr7 (291-363)||(27101204-27101273)
chr7 (291-363)||(27177030-27177099)
chr7 (238-374)||(10332042-10332177)
chr7 (291-374)||(15950351-15950431)
chr7 (289-399)||(1936532-1936639)
chr7 (289-399)||(7283568-7283675)
chr7 (291-374)||(15759673-15759754)
chr7 (220-295)||(16569628-16569703)
chr7 (220-295)||(16595959-16596034)
chr7 (344-398)||(3895712-3895766)
chr7 (327-373)||(17223506-17223552)
chr7 (289-399)||(47290427-47290535)
chr7 (238-319)||(4485287-4485368)
chr7 (291-363)||(16478537-16478606)
chr7 (291-363)||(26009713-26009782)
chr7 (289-397)||(36053273-36053378)
chr7 (291-374)||(371726-371806)
chr7 (291-399)||(11288066-11288173)
chr7 (291-374)||(13910587-13910667)
chr7 (291-374)||(14250458-14250538)
chr7 (181-237)||(14271576-14271632)
chr7 (331-371)||(46474632-46474672)
[»] chr6 (53 HSPs)
chr6 (181-399)||(16887309-16887527)
chr6 (181-320)||(25366842-25366981)
chr6 (181-286)||(15740732-15740837)
chr6 (196-363)||(25920140-25920306)
chr6 (181-320)||(21410645-21410784)
chr6 (181-286)||(21413820-21413925)
chr6 (181-302)||(18381426-18381545)
chr6 (181-302)||(22361378-22361500)
chr6 (181-301)||(21623683-21623804)
chr6 (181-363)||(14128680-14128860)
chr6 (200-363)||(14152845-14153007)
chr6 (218-302)||(15079327-15079411)
chr6 (218-300)||(33325241-33325322)
chr6 (218-300)||(35135630-35135711)
chr6 (291-399)||(16299522-16299628)
chr6 (181-335)||(18629190-18629344)
chr6 (240-302)||(17082814-17082876)
chr6 (183-286)||(17547311-17547415)
chr6 (238-302)||(25654694-25654758)
chr6 (284-399)||(18433271-18433384)
chr6 (290-352)||(18399587-18399648)
chr6 (293-363)||(21623824-21623893)
chr6 (290-396)||(22441579-22441683)
chr6 (182-319)||(31467171-31467308)
chr6 (289-399)||(31628834-31628942)
chr6 (290-399)||(18777776-18777883)
chr6 (290-399)||(22361255-22361362)
chr6 (290-374)||(18381327-18381410)
chr6 (249-373)||(19629884-19630006)
chr6 (284-399)||(18583948-18584061)
chr6 (291-374)||(18838791-18838872)
chr6 (289-374)||(16232505-16232587)
chr6 (290-360)||(17547210-17547279)
chr6 (289-374)||(19610630-19610712)
chr6 (290-360)||(25366775-25366844)
chr6 (181-302)||(33537983-33538104)
chr6 (291-363)||(16375963-16376032)
chr6 (291-363)||(16383287-16383356)
chr6 (289-360)||(16107159-16107230)
chr6 (291-374)||(16555691-16555771)
chr6 (291-374)||(16632247-16632327)
chr6 (291-374)||(1556621-1556702)
chr6 (291-374)||(12415390-12415471)
chr6 (289-399)||(13620329-13620436)
chr6 (291-373)||(14625691-14625770)
chr6 (291-374)||(15741768-15741849)
chr6 (295-373)||(16814564-16814639)
chr6 (289-399)||(19982804-19982911)
chr6 (331-374)||(22582313-22582356)
chr6 (331-374)||(22585103-22585146)
chr6 (331-374)||(22589934-22589977)
chr6 (291-363)||(10489319-10489388)
chr6 (325-374)||(15079284-15079333)
[»] chr3 (81 HSPs)
chr3 (181-399)||(48422090-48422307)
chr3 (181-346)||(17959884-17960048)
chr3 (181-320)||(39657036-39657175)
chr3 (181-374)||(34560368-34560561)
chr3 (181-299)||(38810630-38810748)
chr3 (220-399)||(3575951-3576130)
chr3 (181-299)||(11881835-11881954)
chr3 (290-399)||(11060498-11060606)
chr3 (181-288)||(14058841-14058949)
chr3 (290-399)||(17205323-17205431)
chr3 (181-300)||(17192055-17192175)
chr3 (290-373)||(16880762-16880844)
chr3 (218-320)||(14081041-14081143)
chr3 (219-302)||(12032062-12032146)
chr3 (291-399)||(14285598-14285704)
chr3 (291-399)||(15879020-15879127)
chr3 (220-299)||(47784377-47784456)
chr3 (181-254)||(15876565-15876638)
chr3 (289-374)||(23492992-23493075)
chr3 (249-341)||(15521541-15521632)
chr3 (290-374)||(39657173-39657256)
chr3 (218-298)||(40939675-40939755)
chr3 (292-399)||(12032164-12032270)
chr3 (218-399)||(12487290-12487477)
chr3 (290-373)||(19306430-19306512)
chr3 (284-399)||(34438845-34438958)
chr3 (218-284)||(11328595-11328661)
chr3 (220-302)||(55440473-55440555)
chr3 (290-363)||(11881744-11881816)
chr3 (182-302)||(13301085-13301205)
chr3 (182-302)||(13311741-13311861)
chr3 (218-287)||(16880673-16880742)
chr3 (290-355)||(17192193-17192257)
chr3 (289-354)||(30207863-30207927)
chr3 (291-399)||(11476715-11476821)
chr3 (290-374)||(40939775-40939858)
chr3 (291-374)||(9302686-9302767)
chr3 (289-399)||(19232405-19232512)
chr3 (289-374)||(13954460-13954542)
chr3 (290-352)||(14304692-14304753)
chr3 (289-374)||(45861416-45861498)
chr3 (291-396)||(6146268-6146371)
chr3 (238-319)||(6224682-6224763)
chr3 (294-374)||(12257370-12257447)
chr3 (222-299)||(12953519-12953596)
chr3 (218-267)||(14295986-14296035)
chr3 (290-399)||(14296085-14296193)
chr3 (218-267)||(14301613-14301662)
chr3 (290-399)||(14301712-14301820)
chr3 (219-288)||(17140059-17140128)
chr3 (210-302)||(17205214-17205307)
chr3 (218-299)||(55192575-55192656)
chr3 (305-384)||(12559745-12559824)
chr3 (218-286)||(14527710-14527778)
chr3 (291-363)||(14842140-14842210)
chr3 (250-302)||(15878951-15879003)
chr3 (291-374)||(16821753-16821833)
chr3 (238-286)||(19306350-19306398)
chr3 (291-374)||(49233056-49233136)
chr3 (288-399)||(14527570-14527680)
chr3 (291-373)||(15467914-15467993)
chr3 (291-374)||(15936195-15936276)
chr3 (291-374)||(16933512-16933593)
chr3 (289-360)||(17522419-17522489)
chr3 (289-399)||(28558808-28558915)
chr3 (323-374)||(55440385-55440436)
chr3 (289-374)||(8268293-8268375)
chr3 (289-374)||(8275393-8275475)
chr3 (181-302)||(9590374-9590495)
chr3 (295-373)||(12901656-12901732)
chr3 (289-399)||(17101980-17102088)
chr3 (289-399)||(54424657-54424765)
chr3 (290-399)||(19570184-19570291)
chr3 (220-319)||(4145660-4145760)
chr3 (331-399)||(9590250-9590318)
chr3 (218-286)||(14304592-14304660)
chr3 (291-374)||(18911609-18911689)
chr3 (289-392)||(19260369-19260469)
chr3 (291-374)||(27840835-27840915)
chr3 (290-374)||(38810528-38810611)
chr3 (290-363)||(47784284-47784358)
[»] chr2 (47 HSPs)
chr2 (181-399)||(25305946-25306163)
chr2 (181-374)||(19668652-19668844)
chr2 (181-301)||(24087070-24087190)
chr2 (181-302)||(24294135-24294256)
chr2 (180-320)||(2841-2981)
chr2 (181-301)||(19660391-19660511)
chr2 (290-363)||(24086980-24087053)
chr2 (181-302)||(43646408-43646530)
chr2 (290-399)||(2155318-2155426)
chr2 (218-334)||(7322066-7322181)
chr2 (323-399)||(24294012-24294088)
chr2 (181-284)||(24885150-24885254)
chr2 (219-341)||(722939-723058)
chr2 (249-399)||(16936151-16936299)
chr2 (249-399)||(17006811-17006959)
chr2 (218-341)||(68541-68662)
chr2 (291-374)||(25213679-25213760)
chr2 (289-399)||(25602674-25602784)
chr2 (291-373)||(23777607-23777687)
chr2 (290-363)||(2771-2843)
chr2 (182-302)||(19667040-19667160)
chr2 (290-399)||(23821296-23821404)
chr2 (290-399)||(23830375-23830483)
chr2 (218-299)||(25602575-25602656)
chr2 (254-302)||(2155442-2155490)
chr2 (291-399)||(7507376-7507481)
chr2 (291-363)||(22275368-22275438)
chr2 (291-399)||(22284601-22284707)
chr2 (291-374)||(5888200-5888281)
chr2 (289-399)||(8891824-8891931)
chr2 (290-373)||(22762808-22762889)
chr2 (291-374)||(28030779-28030860)
chr2 (289-374)||(19688971-19689053)
chr2 (290-399)||(17367466-17367573)
chr2 (181-218)||(22762893-22762930)
chr2 (291-363)||(28775376-28775445)
chr2 (291-374)||(11230894-11230974)
chr2 (291-399)||(22256493-22256598)
chr2 (291-374)||(24685338-24685418)
chr2 (291-374)||(42177528-42177608)
chr2 (284-399)||(25875429-25875542)
chr2 (289-374)||(17396223-17396305)
chr2 (218-296)||(27262353-27262430)
chr2 (220-298)||(28974598-28974676)
chr2 (289-374)||(33128684-33128766)
chr2 (291-374)||(24826262-24826343)
chr2 (291-374)||(21142490-21142570)
[»] scaffold1932 (1 HSPs)
scaffold1932 (181-320)||(996-1135)
[»] chr4 (47 HSPs)
chr4 (183-399)||(37956529-37956743)
chr4 (181-301)||(40885180-40885300)
chr4 (181-399)||(34177157-34177382)
chr4 (181-302)||(47534692-47534814)
chr4 (181-302)||(41165582-41165697)
chr4 (249-399)||(12244373-12244522)
chr4 (181-360)||(18276946-18277125)
chr4 (218-399)||(15045377-15045563)
chr4 (218-399)||(15108861-15109047)
chr4 (181-320)||(7964307-7964447)
chr4 (182-288)||(19821404-19821511)
chr4 (218-363)||(52265064-52265207)
chr4 (291-399)||(19021098-19021204)
chr4 (289-399)||(819433-819542)
chr4 (218-300)||(13809128-13809209)
chr4 (291-374)||(10644827-10644907)
chr4 (295-399)||(14499729-14499831)
chr4 (291-374)||(18169585-18169665)
chr4 (291-363)||(19696936-19697006)
chr4 (291-363)||(19707521-19707591)
chr4 (291-374)||(9795839-9795920)
chr4 (289-374)||(15293915-15293997)
chr4 (291-373)||(18248813-18248893)
chr4 (308-374)||(18493652-18493717)
chr4 (222-319)||(41255966-41256064)
chr4 (290-399)||(5682028-5682135)
chr4 (221-298)||(16732723-16732800)
chr4 (289-373)||(22351626-22351707)
chr4 (291-363)||(27954655-27954724)
chr4 (291-374)||(7131625-7131705)
chr4 (291-374)||(8378781-8378861)
chr4 (284-384)||(30458534-30458632)
chr4 (291-374)||(37477773-37477853)
chr4 (290-374)||(40885079-40885162)
chr4 (289-399)||(25118696-25118803)
chr4 (289-374)||(15286806-15286888)
chr4 (318-360)||(15679905-15679947)
chr4 (289-399)||(20813041-20813149)
chr4 (218-300)||(27961518-27961600)
chr4 (249-319)||(38765288-38765358)
chr4 (289-399)||(54117780-54117888)
chr4 (290-399)||(23269427-23269534)
chr4 (290-399)||(34395906-34396013)
chr4 (318-399)||(47534569-47534649)
chr4 (291-374)||(14996750-14996830)
chr4 (291-363)||(16523452-16523522)
chr4 (291-374)||(41063550-41063630)
[»] chr5 (43 HSPs)
chr5 (181-399)||(21222126-21222344)
chr5 (188-302)||(7728939-7729053)
chr5 (181-299)||(28902704-28902822)
chr5 (181-299)||(28939099-28939217)
chr5 (181-302)||(3674375-3674496)
chr5 (181-299)||(23466946-23467063)
chr5 (290-363)||(7729069-7729142)
chr5 (181-352)||(24224911-24225081)
chr5 (181-363)||(37983877-37984066)
chr5 (290-374)||(3674512-3674595)
chr5 (218-363)||(433009-433153)
chr5 (219-336)||(21296753-21296869)
chr5 (219-363)||(23494469-23494612)
chr5 (290-374)||(32965255-32965338)
chr5 (181-302)||(5450453-5450575)
chr5 (290-363)||(23467082-23467154)
chr5 (294-374)||(28902845-28902924)
chr5 (294-374)||(28939240-28939319)
chr5 (291-374)||(7529537-7529618)
chr5 (218-374)||(16596055-16596206)
chr5 (291-374)||(18777551-18777632)
chr5 (289-372)||(7425939-7426019)
chr5 (291-374)||(17471147-17471227)
chr5 (291-399)||(17910128-17910234)
chr5 (291-374)||(19500489-19500569)
chr5 (291-374)||(22882642-22882722)
chr5 (249-301)||(32965355-32965407)
chr5 (291-374)||(43442961-43443041)
chr5 (291-374)||(16106279-16106360)
chr5 (181-224)||(32965841-32965884)
chr5 (289-399)||(27182087-27182195)
chr5 (294-363)||(34939903-34939970)
chr5 (291-399)||(21646246-21646352)
chr5 (291-374)||(23542911-23542991)
chr5 (322-362)||(25005495-25005535)
chr5 (220-319)||(29918619-29918719)
chr5 (181-319)||(6457116-6457254)
chr5 (291-373)||(22366044-22366123)
chr5 (291-374)||(23515177-23515258)
chr5 (289-399)||(21397735-21397844)
chr5 (291-374)||(4199548-4199628)
chr5 (291-374)||(9729917-9729997)
chr5 (291-399)||(11336676-11336783)
[»] scaffold0095 (2 HSPs)
scaffold0095 (181-302)||(33343-33464)
scaffold0095 (290-364)||(33253-33327)
[»] chr8 (49 HSPs)
chr8 (181-302)||(39446381-39446502)
chr8 (181-302)||(17285719-17285840)
chr8 (181-302)||(21191219-21191340)
chr8 (181-302)||(21197765-21197886)
chr8 (181-335)||(15933810-15933964)
chr8 (181-320)||(23837713-23837852)
chr8 (182-360)||(26012004-26012182)
chr8 (290-364)||(39446291-39446365)
chr8 (181-286)||(38534163-38534267)
chr8 (181-399)||(5855125-5855342)
chr8 (218-399)||(22735379-22735567)
chr8 (290-399)||(23837850-23837958)
chr8 (291-399)||(17285857-17285964)
chr8 (181-335)||(33528938-33529092)
chr8 (290-399)||(38534299-38534407)
chr8 (181-302)||(33610666-33610788)
chr8 (238-299)||(29306988-29307049)
chr8 (222-341)||(25296713-25296830)
chr8 (291-373)||(22148061-22148141)
chr8 (182-283)||(23350661-23350763)
chr8 (239-321)||(25758750-25758831)
chr8 (219-300)||(21259133-21259214)
chr8 (291-399)||(18613019-18613125)
chr8 (295-399)||(21493973-21494075)
chr8 (218-286)||(22981818-22981886)
chr8 (290-374)||(23151361-23151444)
chr8 (290-374)||(29307068-29307151)
chr8 (260-320)||(31193922-31193982)
chr8 (291-373)||(2545570-2545650)
chr8 (290-352)||(20653571-20653632)
chr8 (289-397)||(16193379-16193484)
chr8 (289-397)||(24385276-24385381)
chr8 (291-374)||(3430819-3430899)
chr8 (291-374)||(15318715-15318795)
chr8 (291-374)||(15499084-15499164)
chr8 (290-354)||(21197686-21197749)
chr8 (291-374)||(22088350-22088430)
chr8 (291-374)||(24549588-24549668)
chr8 (295-374)||(13661821-13661898)
chr8 (295-374)||(13720484-13720561)
chr8 (289-399)||(29760587-29760694)
chr8 (289-374)||(22906785-22906867)
chr8 (293-374)||(22981921-22982002)
chr8 (289-399)||(39115911-39116019)
chr8 (305-374)||(24105769-24105836)
chr8 (290-398)||(6999816-6999923)
chr8 (291-374)||(17142589-17142669)
chr8 (186-262)||(23151489-23151565)
chr8 (291-374)||(30121330-30121410)
[»] scaffold0025 (1 HSPs)
scaffold0025 (181-399)||(53847-54065)
[»] scaffold0028 (1 HSPs)
scaffold0028 (181-334)||(80050-80202)
[»] scaffold0013 (1 HSPs)
scaffold0013 (181-363)||(35991-36173)
[»] scaffold0150 (2 HSPs)
scaffold0150 (181-302)||(29050-29171)
scaffold0150 (307-374)||(29204-29270)
[»] scaffold0507 (2 HSPs)
scaffold0507 (183-286)||(1169-1272)
scaffold0507 (290-363)||(1065-1137)
[»] scaffold0103 (2 HSPs)
scaffold0103 (283-399)||(34295-34410)
scaffold0103 (218-286)||(34213-34281)
[»] scaffold0032 (6 HSPs)
scaffold0032 (181-301)||(93467-93587)
scaffold0032 (290-374)||(93366-93449)
scaffold0032 (182-302)||(104234-104355)
scaffold0032 (291-374)||(12912-12993)
scaffold0032 (292-374)||(107717-107797)
scaffold0032 (289-399)||(56212-56318)
[»] scaffold0327 (2 HSPs)
scaffold0327 (188-286)||(6188-6286)
scaffold0327 (290-363)||(6318-6390)
[»] scaffold0058 (1 HSPs)
scaffold0058 (218-364)||(69861-70006)
[»] scaffold0700 (1 HSPs)
scaffold0700 (181-361)||(3038-3218)
[»] scaffold0123 (3 HSPs)
scaffold0123 (181-334)||(8521-8673)
scaffold0123 (181-334)||(11387-11539)
scaffold0123 (290-363)||(11524-11596)
[»] scaffold0480 (1 HSPs)
scaffold0480 (220-364)||(8436-8579)
[»] scaffold0243 (1 HSPs)
scaffold0243 (181-364)||(1891-2074)
[»] scaffold0409 (2 HSPs)
scaffold0409 (181-340)||(925-1082)
scaffold0409 (181-340)||(9180-9337)
[»] scaffold0521 (1 HSPs)
scaffold0521 (190-299)||(11616-11725)
[»] scaffold0138 (2 HSPs)
scaffold0138 (188-320)||(22024-22156)
scaffold0138 (290-363)||(21954-22026)
[»] scaffold1295 (2 HSPs)
scaffold1295 (183-320)||(618-755)
scaffold1295 (290-374)||(753-836)
[»] scaffold0389 (1 HSPs)
scaffold0389 (183-320)||(11174-11311)
[»] scaffold1272 (2 HSPs)
scaffold1272 (181-320)||(793-933)
scaffold1272 (290-399)||(931-1039)
[»] scaffold0483 (2 HSPs)
scaffold0483 (181-320)||(7176-7316)
scaffold0483 (323-399)||(7346-7422)
[»] scaffold0010 (2 HSPs)
scaffold0010 (181-334)||(31533-31686)
scaffold0010 (290-396)||(31671-31776)
[»] scaffold0009 (1 HSPs)
scaffold0009 (181-302)||(69971-70093)
[»] scaffold0006 (1 HSPs)
scaffold0006 (181-360)||(196808-196985)
[»] scaffold0342 (1 HSPs)
scaffold0342 (289-395)||(12915-13021)
[»] scaffold0016 (3 HSPs)
scaffold0016 (181-299)||(116172-116291)
scaffold0016 (290-399)||(116046-116154)
scaffold0016 (289-397)||(165778-165883)
[»] scaffold0682 (1 HSPs)
scaffold0682 (291-399)||(8078-8184)
[»] scaffold0207 (1 HSPs)
scaffold0207 (291-399)||(11312-11418)
[»] scaffold0643 (1 HSPs)
scaffold0643 (308-395)||(152-238)
[»] scaffold0031 (3 HSPs)
scaffold0031 (181-319)||(96794-96933)
scaffold0031 (218-299)||(31594-31675)
scaffold0031 (290-352)||(71261-71322)
[»] scaffold0338 (2 HSPs)
scaffold0338 (289-399)||(9633-9742)
scaffold0338 (218-286)||(9535-9603)
[»] scaffold0022 (4 HSPs)
scaffold0022 (289-399)||(112037-112146)
scaffold0022 (238-354)||(102509-102624)
scaffold0022 (294-374)||(4771-4848)
scaffold0022 (239-300)||(110156-110217)
[»] scaffold0118 (1 HSPs)
scaffold0118 (294-399)||(33969-34072)
[»] scaffold0125 (1 HSPs)
scaffold0125 (291-399)||(43556-43662)
[»] scaffold0610 (2 HSPs)
scaffold0610 (297-384)||(9614-9700)
scaffold0610 (218-374)||(108-274)
[»] scaffold0396 (1 HSPs)
scaffold0396 (289-399)||(11201-11311)
[»] scaffold0151 (1 HSPs)
scaffold0151 (181-283)||(22047-22150)
[»] scaffold0026 (2 HSPs)
scaffold0026 (210-341)||(89444-89573)
scaffold0026 (292-374)||(108357-108437)
[»] scaffold0162 (1 HSPs)
scaffold0162 (181-302)||(6636-6758)
[»] scaffold0021 (8 HSPs)
scaffold0021 (290-399)||(12701-12809)
scaffold0021 (290-399)||(26079-26187)
scaffold0021 (228-299)||(12611-12682)
scaffold0021 (220-299)||(16450-16529)
scaffold0021 (220-299)||(25981-26060)
scaffold0021 (289-399)||(131744-131852)
scaffold0021 (290-399)||(16548-16656)
scaffold0021 (291-363)||(167883-167952)
[»] scaffold0014 (3 HSPs)
scaffold0014 (290-399)||(85980-86088)
scaffold0014 (218-286)||(159849-159917)
scaffold0014 (290-374)||(159947-160030)
[»] scaffold0173 (1 HSPs)
scaffold0173 (291-399)||(5846-5952)
[»] scaffold0076 (1 HSPs)
scaffold0076 (291-374)||(43605-43685)
[»] scaffold0001 (2 HSPs)
scaffold0001 (291-399)||(164514-164620)
scaffold0001 (295-399)||(61457-61561)
[»] scaffold0447 (1 HSPs)
scaffold0447 (291-374)||(144-225)
[»] scaffold0387 (1 HSPs)
scaffold0387 (291-374)||(6741-6822)
[»] scaffold0383 (1 HSPs)
scaffold0383 (291-374)||(3008-3089)
[»] scaffold0227 (1 HSPs)
scaffold0227 (235-302)||(26637-26704)
[»] scaffold0035 (2 HSPs)
scaffold0035 (289-399)||(108957-109066)
scaffold0035 (289-399)||(117458-117567)
[»] scaffold0075 (1 HSPs)
scaffold0075 (291-363)||(34028-34098)
[»] scaffold0615 (1 HSPs)
scaffold0615 (291-374)||(5754-5835)
[»] scaffold0589 (1 HSPs)
scaffold0589 (217-300)||(8351-8434)
[»] scaffold0359 (2 HSPs)
scaffold0359 (284-399)||(1944-2058)
scaffold0359 (289-384)||(11165-11258)
[»] scaffold0183 (2 HSPs)
scaffold0183 (284-399)||(5184-5297)
scaffold0183 (289-374)||(7210-7292)
[»] scaffold0077 (2 HSPs)
scaffold0077 (289-399)||(36457-36564)
scaffold0077 (289-374)||(2607-2689)
[»] scaffold0003 (1 HSPs)
scaffold0003 (291-374)||(7824-7905)
[»] scaffold0335 (1 HSPs)
scaffold0335 (289-399)||(5095-5203)
[»] scaffold0218 (1 HSPs)
scaffold0218 (289-399)||(4696-4804)
[»] scaffold0215 (2 HSPs)
scaffold0215 (289-374)||(8914-8996)
scaffold0215 (289-374)||(15812-15894)
[»] scaffold0116 (1 HSPs)
scaffold0116 (289-374)||(652-734)
[»] scaffold0092 (2 HSPs)
scaffold0092 (218-288)||(3866-3936)
scaffold0092 (291-374)||(10308-10388)
[»] scaffold0673 (1 HSPs)
scaffold0673 (290-399)||(6341-6448)
[»] scaffold0376 (1 HSPs)
scaffold0376 (291-363)||(65-134)
[»] scaffold0357 (1 HSPs)
scaffold0357 (220-319)||(6967-7065)
[»] scaffold0266 (1 HSPs)
scaffold0266 (289-397)||(3124-3229)
[»] scaffold0225 (1 HSPs)
scaffold0225 (291-363)||(22849-22918)
[»] scaffold0120 (1 HSPs)
scaffold0120 (293-374)||(27538-27618)
[»] scaffold1500 (1 HSPs)
scaffold1500 (291-374)||(1073-1153)
[»] scaffold0574 (1 HSPs)
scaffold0574 (294-374)||(9053-9131)
[»] scaffold0369 (1 HSPs)
scaffold0369 (291-374)||(4339-4419)
[»] scaffold0367 (1 HSPs)
scaffold0367 (291-374)||(16866-16946)
[»] scaffold0213 (1 HSPs)
scaffold0213 (291-374)||(29806-29886)
[»] scaffold0193 (1 HSPs)
scaffold0193 (291-374)||(32200-32280)
[»] scaffold0066 (1 HSPs)
scaffold0066 (291-363)||(45648-45718)
[»] scaffold0029 (1 HSPs)
scaffold0029 (291-363)||(49408-49478)
[»] scaffold0023 (3 HSPs)
scaffold0023 (291-363)||(153576-153646)
scaffold0023 (291-374)||(169469-169549)
scaffold0023 (291-363)||(36701-36770)
[»] scaffold0892 (1 HSPs)
scaffold0892 (295-374)||(4027-4104)
[»] scaffold0529 (1 HSPs)
scaffold0529 (291-374)||(3577-3658)
[»] scaffold0498 (1 HSPs)
scaffold0498 (289-399)||(9495-9602)
[»] scaffold0303 (1 HSPs)
scaffold0303 (294-373)||(4001-4078)
[»] scaffold0686 (1 HSPs)
scaffold0686 (292-397)||(5391-5493)
[»] scaffold0473 (1 HSPs)
scaffold0473 (289-374)||(9631-9713)
[»] scaffold0175 (3 HSPs)
scaffold0175 (292-374)||(522-602)
scaffold0175 (289-392)||(5340-5440)
scaffold0175 (291-374)||(17647-17727)
[»] scaffold0034 (1 HSPs)
scaffold0034 (290-399)||(46813-46922)
[»] scaffold0008 (2 HSPs)
scaffold0008 (289-399)||(23336-23444)
scaffold0008 (291-374)||(31236-31316)
[»] scaffold0816 (1 HSPs)
scaffold0816 (290-399)||(2559-2666)
[»] scaffold0808 (1 HSPs)
scaffold0808 (260-341)||(1871-1950)
[»] scaffold0247 (1 HSPs)
scaffold0247 (291-363)||(23177-23246)
[»] scaffold0191 (1 HSPs)
scaffold0191 (291-363)||(7027-7096)
[»] scaffold0184 (1 HSPs)
scaffold0184 (291-399)||(30791-30896)
[»] scaffold0078 (1 HSPs)
scaffold0078 (291-399)||(41948-42053)
[»] scaffold0467 (1 HSPs)
scaffold0467 (291-374)||(8612-8692)
[»] scaffold0117 (1 HSPs)
scaffold0117 (289-317)||(11142-11170)
[»] scaffold0017 (2 HSPs)
scaffold0017 (291-363)||(44176-44246)
scaffold0017 (291-363)||(54479-54549)
[»] scaffold0004 (1 HSPs)
scaffold0004 (289-392)||(193017-193117)


Alignment Details
Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 399
Target Start/End: Original strand, 17023518 - 17023734
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||| ||||  ||||||||  |||||||  ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||| |||    
T  17023518 attttctcttaaaacaagtcttatataggctattctcctaatgggcttaaccctaatccttagtggacttaacccactccaactcaattctaaaatgttt 17023617  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccac 380  Q
    |||||||| |||||||||||||  | |||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||  |||||||||   |||    
T  17023618 ctacactcttaacggtaaaatactaacaacggtcactt-aacggtaaaatactaattactacactagtaacttagtaaaataatggttctcactaaacac 17023716  T
Q  381 taaacgtaattctcaccaa 399  Q
    ||||  |||||||||||||    
T  17023717 taaa-ataattctcaccaa 17023734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 374
Target Start/End: Original strand, 27675331 - 27675503
Alignment:
Q  201 ttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  27675331 ttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaattctaaaatgtttctacagtcacaacggtaaaa 27675430  T
Q  301 tatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||  |  |||| |||||| || |||||||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  27675431 tactattaacgatcactt-aacggtaaaatactaattactacactagtaacttagtaaaataatggttctcact 27675503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 181 - 363
Target Start/End: Original strand, 20177690 - 20177872
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||||||||||| |||||| ||||||| ||||| || ||||||| |||||||||||||||||||||| ||||| ||    
T  20177690 attttctcttaagacaagtcttatatattctattctcttaatgagcttaaccctaaaaccctagtggacttaacccactccaactcaattctaaaatgtt 20177789  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||| | | ||||||||||||| |  || | |||||| || |||||||||||||||||||| ||||||||||| ||||||||    
T  20177790 tctacatttacaacggtaaaatattattaatgatcactt-aacggtaaaatactaattactacactagtaacttagtaaaataa 20177872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 16657151 - 16657269
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||| ||||| |||    
T  16657151 attttctcttaagacaacccttatatagtctattctcttaatgggcttaaccctaaaccttagtcgacttaacccactccaactcaattctaaaatgttt 16657250  T
Q  281 ctacactcataacggtaaa 299  Q
    ||||||||  |||||||||    
T  16657251 ctacactctaaacggtaaa 16657269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 19603621 - 19603741
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttc 281  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||||||  ||||| ||||    
T  19603621 ttttctcttaagacaacccttaaatagtctattctcttaatgggcttaaccctaaaccttagtggacttaatccactccaactcaattttaaaatgtttc 19603720  T
Q  282 tacactcataacggtaaaata 302  Q
    |||||||| ||||||||||||    
T  19603721 tacactcacaacggtaaaata 19603741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 181 - 396
Target Start/End: Original strand, 17609441 - 17609657
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||| |||  |||||| | ||||| ||||||| ||||| |||||||| | ||||||||||| ||| |||||| ||||| ||    
T  17609441 attttctcttaagacaaggcttaaataggctattcctctaatgagcttaaccctaaaaccttagtgaacttaacccactcaaacacaattctaaaatgtt 17609540  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaat-aaaataacagttctcactcgcc 378  Q
    ||||||||| |||||||||||||  | |||||||||||| || ||||||||||||||||| || ||||||||||| | |||||||  |||||||||   |    
T  17609541 tctacactcttaacggtaaaatactaacaacggtcactt-aacggtaaaatactaattaccacactagtaacttagtaaaaataatggttctcactaaac 17609639  T
Q  379 actaaacgtaattctcac 396  Q
    ||||||  ||||||||||    
T  17609640 actaaaaataattctcac 17609657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 38033416 - 38033298
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||||||||||||  ||||| | |||||||||||||| |||||||| |||||| |||||||||||||||||||||| ||||| |||    
T  38033416 attttctcttaagacaacccttatatagcctattttcttaatgggcttaaccctaaacctcagtggacttaacccactccaactcaattctaaaatgttt 38033317  T
Q  281 ctacactcataacggtaaa 299  Q
    |||||| |  |||||||||    
T  38033316 ctacacactcaacggtaaa 38033298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 41219599 - 41219476
Alignment:
Q  180 aattttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatat 278  Q
    ||||||||||||| | ||  |||||||| |||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||| |||| ||||| |    
T  41219599 aattttctcttaaaataattcttatatagtctattctcttaatgggcttaaccctaagaccttagtggacttaacccactccaactcgattctaaaatgt 41219500  T
Q  279 ttctacactcataacggtaaaata 302  Q
    ||||||||||| ||||||||||||    
T  41219499 ttctacactcacaacggtaaaata 41219476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 13376592 - 13376472
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||| ||||  |||||||| |||||| | |||||||||||||| |||| |||||||||| |||||||||||||||||| ||| ||||| |||    
T  13376592 attttctcttaaaacaagtcttatatagtctattttcttaatgggcttaaccctaa-ccttagtggacttaacccactccaactcagttctaaaatgttt 13376494  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  13376493 ctacactcacaacggtaaaata 13376472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 20955175 - 20955070
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||| |||| || ||||||| |||||||||||||||||||||  ||||| |||    
T  20955175 attttctcttaagacaacccttatatagtttattctcttaatgggcttaaccctaagccctagtggacttaacccactccaactcaattgtaaaatgttt 20955076  T
Q  281 ctacac 286  Q
    ||||||    
T  20955075 ctacac 20955070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 16646561 - 16646644
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  16646561 taacggtaaaatattaccaacggtcacttaac-ggtaaaatactaattactaccctagtaacttagtaaaataatggttctcact 16646644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 341
Target Start/End: Complemental strand, 22829121 - 22829000
Alignment:
Q  219 taatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||| ||||  |||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||  |||||||||| |  | ||||||||||||    
T  22829121 taatgggcctaaccttaaagcttagtggacttaacccactccaactcaattctaaaatgtttctacactctaaacggtaaaacactaacaacggtcactt 22829022  T
Q  319 aaatggtaaaatactaattacta 341  Q
     || |||||||||||||| ||||    
T  22829021 -aacggtaaaatactaataacta 22829000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 399
Target Start/End: Complemental strand, 51627365 - 51627183
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcata--acggtaaaatatcaccaacggtca 315  Q
    |||| |||| |||| ||||| |||| |||||||||| |||||||| |||| || ||||  ||||||||| || |  |||||||| ||  |  ||||||||    
T  51627365 ttaacgggcctaaccctaaagcttaatggatttaactcactccaattcaaatctaaaaagtttctacacacacacaacggtaaattactaataacggtca 51627266  T
Q  316 cttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    |||||  |||||||||||||||||||| ||||||||||| ||||||||  |||||||||   |||||||  |||||||||||||    
T  51627265 cttaac-ggtaaaatactaattactactctagtaacttagtaaaataatggttctcactaaacactaaaaataattctcaccaa 51627183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 35521946 - 35521838
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||| ||||||||||||| || |||||||||||||  ||||| ||| ||||||||||| ||||| ||| |||||||||   ||||||| |||    
T  35521946 ataacggtaaaacatcaccaacggtctct-aaatggtaaaatatcaattattactctagtaacttagtaaaacaacggttctcactaatcactaaaagta 35521848  T
Q  389 attctcacca 398  Q
    ||||||||||    
T  35521847 attctcacca 35521838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 320
Target Start/End: Original strand, 16646462 - 16646563
Alignment:
Q  219 taatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||| ||||  |||| ||||||||| |||||| |||||||||||| || ||||| |||||||||||| ||||||||||||  |  |||||||||||    
T  16646462 taatgggcctaaccttaaagcttagtggacttaaccgactccaactcaaatctaaaatgtttctacactcacaacggtaaaatactattaacggtcactt 16646561  T
Q  319 aa 320  Q
    ||    
T  16646562 aa 16646563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 37233595 - 37233469
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactct-aaaccttagtggatttaacccactc---caact-caattccaaaa 275  Q
    |||||||||||||||||  ||||||||  |||||| | ||||| ||||||| || ||||||||||||| |||||||||||   ||| | |||||| ||||    
T  37233595 attttctcttaagacaaagcttatatagactattcctataatgagcttaaccctaaaaccttagtggacttaacccactcacgcaattacaattctaaaa 37233496  T
Q  276 tatttctacactcataacggtaaaata 302  Q
    | |||||||||||| ||||||||||||    
T  37233495 tgtttctacactcacaacggtaaaata 37233469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 16657292 - 16657371
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||  ||||||||||||||||  |||||| || |||||||||| ||||||||||| ||||||||| |||||||||    
T  16657292 ggtaaaatactaccaacggtcacttaac-ggtaaactattaattactactctagtaacttagtaaaataacggttctcact 16657371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 27329364 - 27329256
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||| ||||||| |||||||||||||||  || |||||||   |||||| ||| ||||||| ||| ||||| |||||||||||||   ||||||| |||    
T  27329364 ataacagtaaaatgtcaccaacggtcact--aacggtaaaaccttaattattactctagtaatttagtaaaacaacagttctcactaatcactaaaagta 27329267  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  27329266 attctcaccaa 27329256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 44034590 - 44034483
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||||||||||||||||| |||||||  ||||||||   ||||||| |||    
T  44034590 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--taccctagtaacttaatgaaataactattctcactaatcactaaaagta 44034494  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  44034493 attctcaccaa 44034483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 351
Target Start/End: Original strand, 49968280 - 49968346
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaac 351  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||    
T  49968280 cactaataacggtaaaatatcaccaacggtcac-taaatggtaaaatatcaattattactctagtaac 49968346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 24568387 - 24568305
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| |||||||| ||||||||||    
T  24568387 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagagttctcact 24568305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 36355987 - 36355921
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||||| |||| ||||| ||||||| |||||||||||| ||||||||||| ||||| |||||||||    
T  36355987 aatgggcctaaccctaaagcttagtgaatttaacccacttcaactcaattctaaaatgtttctacac 36355921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 22228425 - 22228505
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  22228425 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 22228505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 20254936 - 20255017
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  20254936 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 20255017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 399
Target Start/End: Complemental strand, 41219427 - 41219352
Alignment:
Q  324 gtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    ||||||||||||||||||| ||||||||||| ||||||||  |||||||||   |||||||  |||||| ||||||    
T  41219427 gtaaaatactaattactacactagtaacttagtaaaataatggttctcactaaacactaaaaataattcccaccaa 41219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 22143096 - 22142994
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttc 281  Q
    ||||||||||||||||  ||||||||  |||||| |  |||| ||||||||  | ||| ||||||| ||||||||||| ||| |||||| ||||| ||||    
T  22143096 ttttctcttaagacaaggcttatataggctattcctcaaatgagcttaacttaataccctagtggacttaacccactcaaacacaattctaaaatgtttc 22142997  T
Q  282 tac 284  Q
    |||    
T  22142996 tac 22142994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 19603757 - 19603829
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||| ||||  | ||||||||||||||  ||||||||| |||||||||| ||||||||||| ||||||||    
T  19603757 taacggtagaatactagcaacggtcacttaac-ggtaaaatattaattactacactagtaacttagtaaaataa 19603829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 35055395 - 35055502
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||||||||||||| |||| ||||||||  |||||  ||| ||||||||||  ||||| ||| |||||||||   |||||||  |||    
T  35055395 taacggtaaaatgtcaccaacggtcac-taaacggtaaaatcttaatt-ttactctagtaactttgtaaaacaacggttctcactaatcactaaaattaa 35055492  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  35055493 ttctcaccaa 35055502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 37233453 - 37233381
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| || |||| |||||||||  |||||||||||||| || || ||||||||||| ||||||||    
T  37233453 taacggtaaaataccaacaacagtcacttaac-ggtaaaatactaataaccacactagtaacttagtaaaataa 37233381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 22238439 - 22238359
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| | |||| ||||| ||||||||||| ||||||||  |||||||||    
T  22238439 aacggtaaaatataaccaacggtcact--aacggtaaaa-attaatcactacactagtaacttagtaaaataagggttctcact 22238359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 21860646 - 21860753
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  21860646 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 21860742  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  21860743 attcccaccaa 21860753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 49997016 - 49996878
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||   |||||||  ||||| ||  |||||||||||| ||||  |||||||||  ||||||||| | | | |||||| ||||| ||    
T  49997016 attttctcttaagacaaggtttatataggctatt-ttcaaatgggcttaaccctaatgccttagtgggcttaacccacccaatcacaattctaaaatgtt 49996918  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||| | |||||||||||||  | ||| |||||||||    
T  49996917 tctacacacttaacggtaaaatactaacaaaggtcactta 49996878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 7640578 - 7640496
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | | |||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  7640578 ataacggtaaaatgtaatcaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 7640496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 20931954 - 20932056
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  20931954 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 20932050  T
Q  389 attctc 394  Q
    ||||||    
T  20932051 attctc 20932056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 396
Target Start/End: Original strand, 41212666 - 41212770
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||| |||||||||  ||||||||   ||||||| ||||    
T  41212666 taacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaattt-tactctagtaacttagtaaaataactattctcactaatcactaaaagtaa 41212763  T
Q  390 ttctcac 396  Q
    |||||||    
T  41212764 ttctcac 41212770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 18059397 - 18059318
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || |||||||  ||||| ||||| ||||||||||| ||||||||  |||||||||    
T  18059397 aacggtaaaatataacgaacggtcact--aacggtaaaa--ctaatcactacactagtaacttagtaaaataagggttctcact 18059318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 20955038 - 20954966
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||| |||||||| | ||||||||| ||||  ||||||||||| |  ||||||||||||||||| ||||||||    
T  20955038 taacgataaaatattaacaacggtcatttaac-ggtaaaatactgaccactaccctagtaacttagtaaaataa 20954966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 36355889 - 36355817
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||  ||| |||||||| ||| ||||||||||||||||  || ||||||||||||  |||||||    
T  36355889 taacggtaaaatactaccgacggtcacataa-tggtaaaatactaattgttatcctagtaacttagcaaaataa 36355817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 44320267 - 44320374
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| | || |||||||||| ||| ||||||||  || ||  ||| ||||||||||| |||||||||  ||||||||   ||||||| ||||    
T  44320267 taacggtaaaatgttactaacggtcact-aaacggtaaaatcttagttt-tactctagtaacttagtaaaataactattctcactaatcactaaaagtaa 44320364  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  44320365 ttctcaccaa 44320374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 8537655 - 8537519
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||   |||||||| |||||| |  |||||||| ||| ||||  |||||||||  |||||||||   | | |||||| ||||| ||    
T  8537655 attttctcttaagacaaggtttatatatgctattc-tcaaatgggctcaaccctaatgccttagtgggcttaacccaccaaatcacaattctaaaatgtt 8537557  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||||  |||||||||||||  | |||||||||||||    
T  8537556 tctacact--taacggtaaaatactaacaacggtcactta 8537519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 8602894 - 8602758
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||   |||||||| |||||| |  |||||||| ||| ||||  |||||||||  |||||||||   | | |||||| ||||| ||    
T  8602894 attttctcttaagacaaggtttatatatgctattc-tcaaatgggctcaaccctaatgccttagtgggcttaacccaccaaatcacaattctaaaatgtt 8602796  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||||  |||||||||||||  | |||||||||||||    
T  8602795 tctacact--taacggtaaaatactaacaacggtcactta 8602758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 181 - 372
Target Start/End: Original strand, 13378044 - 13378234
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||  |||||||| | ||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||| |||    
T  13378044 attttctcttaagacaattcttatatagtttattcctttaatgggcttaaccctaaaccttagtggacttaacctactccaactcaattccaaaatgttt 13378143  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctca 372  Q
    |||||| || || ||||| |||  |  ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  13378144 ctacacacacaatggtaacatactattaacggtcactt-aacggtaaaatactaattactaccctagtaacttagtaaaataatggttctca 13378234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 13389869 - 13389990
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||| ||  |||||||| | |||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||    
T  13389869 attttctcttaagataattcttatatagtttattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaattctacaatattt 13389968  T
Q  281 ctacactcataacggtaaaata 302  Q
    |||||| || ||||||||||||    
T  13389969 ctacacacacaacggtaaaata 13389990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 399
Target Start/End: Complemental strand, 16914662 - 16914443
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | ||||||||||||  ||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  16914662 attttctcttaagacaatacttatataggctattcctctaatgggcttaatcctaattccttagtggacttaacccactcaaacacaattctaaaatgtt 16914563  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaat-aaaataacagttctcactcgcc 378  Q
    ||||||||| |||||||||||||  | |||| ||||||| || |||||||||||||| || || ||||||||||| | |||||||  |||||||||   |    
T  16914562 tctacactcttaacggtaaaatactaacaacagtcactt-aacggtaaaatactaataaccacactagtaacttagtaaaaataatggttctcactaaac 16914464  T
Q  379 actaaacgtaattctcaccaa 399  Q
    ||||||  |||||||||||||    
T  16914463 actaaaattaattctcaccaa 16914443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 374
Target Start/End: Complemental strand, 34240941 - 34240741
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||| ||  ||||||||  |||||| | ||||||||||||| ||||  |||||||||||||||||||||| ||| |||||| ||||| ||    
T  34240941 attttctcttaagataaggcttatataggctattcctctaatgggcttaaccctaatgccttagtggatttaacccactcaaacacaattctaaaatgtt 34240842  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatacta-------attactaccctagtaacttaataaaataacagttctca 372  Q
    ||||||||| |||||||||||||  | |||||  ||||| || ||||||||||||       |||||||| ||||||||||| |||||||| ||||||||    
T  34240841 tctacactcttaacggtaaaatactaacaacgaccactt-aacggtaaaatactaataactcattactacactagtaacttagtaaaataatagttctca 34240743  T
Q  373 ct 374  Q
    ||    
T  34240742 ct 34240741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 360
Target Start/End: Original strand, 48357156 - 48357335
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  ||||||   |||||||||||||  |||  |||  ||||| ||||||||||| ||| |||||| ||||| ||    
T  48357156 attttctcttaagacaaagcttatataggctattcccataatgggcttaaccttaattcctcggtggacttaacccactcgaacacaattctaaaatgtt 48357255  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    ||||||||| ||||||||||||| || ||||| |||||| || |||||||||||||| || || ||||||||||| |||||    
T  48357256 tctacactcttaacggtaaaataccaacaacgatcactt-aacggtaaaatactaataaccacactagtaacttagtaaaa 48357335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 17223669 - 17223550
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||||||  |||||||| |||||| | ||||| ||||| ||||| |||| |||||||||||||||||||||| ||||| ||    
T  17223669 attttctcttaagacaagtcttatatggtctattctcttaatgagtttaaccctaaaaccttactggacttaacccactccaactcaattctaaaatgtt 17223570  T
Q  280 tctacactcataacggtaaa 299  Q
    |||||| ||| |||||||||    
T  17223569 tctacattcacaacggtaaa 17223550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 16569606 - 16569522
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||| ||||||||||| ||||| |||||||||||||    
T  16569606 ataacggtaaaatatcaccaacggtcact-aaacggtaaaatattaattattactctagtaacttagtaaaacaacagttctcact 16569522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 16596056 - 16596140
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||| ||||||||||| ||||| |||||||||||||    
T  16596056 ataacggtaaaatatcaccaacggtcact-aaacggtaaaatattaattattactctagtaacttagtaaaacaacagttctcact 16596140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 320
Target Start/End: Original strand, 9081158 - 9081257
Alignment:
Q  221 atgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||||| |||| ||||| ||||||||| ||||||||||||||||||| || ||||| |||||||||||| ||||||||||||  |  |||||||||||||    
T  9081158 atgggcctaaccctaaagcttagtggacttaacccactccaactcaaatctaaaatgtttctacactcacaacggtaaaatactattaacggtcacttaa 9081257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 16920188 - 16920294
Alignment:
Q  292 acggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaatt 391  Q
    |||||||||||  | ||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||  |||||||||   |||||||  |||||    
T  16920188 acggtaaaatactaacaacggtcacttaac-ggtaaaatactaattactaccctagtaacttagtaaaataatggttctcactaaacactaaaaataatt 16920286  T
Q  392 ctcaccaa 399  Q
    ||||||||    
T  16920287 ctcaccaa 16920294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 12247719 - 12247636
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||| |||||| |||||| ||| ||||||||| |||||||||| ||||||||||| ||||| |||||||||||||    
T  12247719 taacggtaaaatattaccaacagtcact-aaacggtaaaatattaattactactctagtaacttagtaaaacaacagttctcact 12247636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 16920048 - 16920170
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||   |||||||   ||||| | ||| ||||||||| ||||| |||||||||| ||||||||||| ||  |||||| ||||| ||    
T  16920048 attttctcttaagacaagatttatataggttattcctctaacgggcttaaccctaaatccttagtggacttaacccactcaaatacaattctaaaatgtt 16920147  T
Q  280 tctacactcataacggtaaaata 302  Q
    |||||||||| ||||||||||||    
T  16920148 tctacactcacaacggtaaaata 16920170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 49047375 - 49047294
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  49047375 ttaatgggcctaaccctaaagcttagtggacttaacccactccaattcaattctaaaatgtttctacactc-taacggtaaaa 49047294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 9081255 - 9081363
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaactta-ataaaataacagttctcactcgccactaaacgta 388  Q
    |||| ||||||||  ||||||||||||||||  |||||| |||||||||||||||||||||||||   |||||||| |||||||||  ||||||||  ||    
T  9081255 taacagtaaaatactaccaacggtcacttaac-ggtaaagtactaattactaccctagtaacttagcaaaaataacggttctcactaaccactaaa-ata 9081352  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  9081353 attctcaccaa 9081363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 13862552 - 13862444
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||  ||| |  ||| ||||||||||| ||||| |||||||||||||  |||||||| |||    
T  13862552 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatcttaactt-tactctagtaacttagtaaaacaacagttctcactaaccactaaaagta 13862455  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  13862454 attctcaccaa 13862444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 9611821 - 9611961
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | ||||||||| ||| ||||  |||||||||| |||||| |||| ||| |||||| ||||| ||    
T  9611821 attttctcttaagacaaggcttatatagactattcctctaatgggctcaaccctaattccttagtggacttaaccaactcaaacacaattctaaaatgtt 9611920  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    ||||| | |  ||||||||||||  |  |||||||||||||    
T  9611921 tctactcacgcaacggtaaaatactaataacggtcacttaa 9611961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 9839392 - 9839532
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | ||||||||| ||| ||||  |||||||||| |||||| |||| ||| |||||| ||||| ||    
T  9839392 attttctcttaagacaaggcttatatagactattcctctaatgggctcaaccctaattccttagtggacttaaccaactcaaacacaattctaaaatgtt 9839491  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    ||||| | |  ||||||||||||  |  |||||||||||||    
T  9839492 tctactcacgcaacggtaaaatactaataacggtcacttaa 9839532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 14268577 - 14268513
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    |||||||||| ||||||||||| ||| |||||| ||||| ||||||||||| |||||||||||||    
T  14268577 ccttagtggacttaacccactcaaacacaattctaaaatgtttctacactcttaacggtaaaata 14268513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 18253487 - 18253406
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  18253487 aacggtaaaatatgaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 18253406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 31501684 - 31501822
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||   |||||||  |||||||   |||||||||||| ||||  |||||||||  ||||||||||| | | |||||| ||||| ||    
T  31501684 attttctcttaagacaaggtttatataggctattctca-aatgggcttaaccctaatgccttagtgggcttaacccactcaatcacaattctaaaatgtt 31501782  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||| | |||||||||||||  | |||||||||||||    
T  31501783 tctacacacttaacggtaaaatactaacaacggtcactta 31501822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 44865858 - 44865971
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| |||||||||||||||||| ||||||||||| || ||||||||  |||||  ||| ||||||||||| ||||| |||  ||||||||  |||||||    
T  44865858 cactaataacggtaaaatatcactaacggtcactt-aacggtaaaatcttaatt-ttactctagtaacttagtaaaacaactattctcactaaccactaa 44865955  T
Q  384 acgtaattctcaccaa 399  Q
    | |||| |||||||||    
T  44865956 aagtaactctcaccaa 44865971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 48622317 - 48622236
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||||||||||||  |||||||||    
T  48622317 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttaataaaataagggttctcact 48622236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 13275327 - 13275393
Alignment:
Q  222 tgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactc 288  Q
    ||||| |||| ||||| | ||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  13275327 tgggcctaaccctaaagcgtagtggacttaacccactccaactcaattctaaaatgtttctacactc 13275393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 13390006 - 13390089
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||| |  | ||||||||||||||  |||||| ||||| ||||||||||||||||||| ||||||||  |||||||||    
T  13390006 taacggtaaaacactagcaacggtcacttaac-ggtaaagtactacttactaccctagtaacttagtaaaataatggttctcact 13390089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 14268497 - 14268414
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||| ||||||||  |||||||||||||| || || ||||||||||| ||||||||  |||||||||    
T  14268497 taacggtaaaataccaacaacgatcacttaac-ggtaaaatactaataaccacactagtaacttagtaaaataatggttctcact 14268414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 47480666 - 47480560
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| || |||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||   || ||||  ||||    
T  47480666 aacggtaaaatataacaaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataatggttctcactaaacattaaaaataat 47480569  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  47480568 tctcaccaa 47480560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 16419112 - 16419193
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  16419112 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 16419193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 15928183 - 15928265
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  15928183 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 15928265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 7823325 - 7823394
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  7823325 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 7823394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 7830636 - 7830705
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  7830636 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 7830705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 12899910 - 12899979
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  12899910 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 12899979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 27101273 - 27101204
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  27101273 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 27101204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 27177030 - 27177099
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  27177030 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 27177099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 374
Target Start/End: Complemental strand, 10332177 - 10332042
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaatt 337  Q
    |||||||||  ||||||||| | | | |||||| ||||| ||||||||| | |||||||||||||  | |||||||||||||   | | | | |||| ||    
T  10332177 ccttagtgggcttaacccacccaatcacaattctaaaatgtttctacacacttaacggtaaaatactaacaacggtcacttaccggctcaca-actattt 10332079  T
Q  338 actaccctagtaacttaataaaataacagttctcact 374  Q
    || || ||||||||||| |||||||| ||||||||||    
T  10332078 accacactagtaacttagtaaaataatagttctcact 10332042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 15950431 - 15950351
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  15950431 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 15950351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 1936639 - 1936532
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  1936639 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 1936543  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  1936542 attcccaccaa 1936532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 7283675 - 7283568
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||  || ||  ||| ||||||||||| |||||||||  ||||||||   ||||||| |||    
T  7283675 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatcttagtt--tactctagtaacttagtaaaataactattctcactaatcactaaaagta 7283579  T
Q  389 attctcaccaa 399  Q
    | |||||||||    
T  7283578 actctcaccaa 7283568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 15759754 - 15759673
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| || ||||||||||||| ||| ||||||| |||||| ||||  ||||||||||| ||||||||  |||||||||    
T  15759754 aacggtaaaacataaccaacggtcact-aaacggtaaaa-actaatcactaaactagtaacttagtaaaataagggttctcact 15759673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 16569703 - 16569628
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacgg 295  Q
    ||||||| |||| ||||| |||| ||||||||||||| ||||||| ||||| | ||| ||||||||| || |||||    
T  16569703 aatgggcctaaccctaaagcttaatggatttaacccattccaacttaattctacaatgtttctacacacacaacgg 16569628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 16595959 - 16596034
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacgg 295  Q
    ||||||| |||| ||||| |||| ||||||||||||| ||||||| ||||| | ||| ||||||||| || |||||    
T  16595959 aatgggcctaaccctaaagcttaatggatttaacccattccaacttaattctacaatgtttctacacacacaacgg 16596034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 3895712 - 3895766
Alignment:
Q  344 ctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcacca 398  Q
    ||||||||||| ||||| ||| |||||||||  |||||||| |||||||||||||    
T  3895712 ctagtaacttagtaaaacaacggttctcactaaccactaaaagtaattctcacca 3895766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 17223552 - 17223506
Alignment:
Q  327 aaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    |||||||||||||||| ||||||||||| ||||||||  ||||||||    
T  17223552 aaatactaattactacactagtaacttagtaaaataatggttctcac 17223506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 47290427 - 47290535
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||  |||||  ||| ||| ||||||| ||||| |||  ||||||||  | |||||| |||    
T  47290427 ataacggtaaaatgtcactaacggtcac-taaacggtaaaatcttaatt-ttactctattaacttagtaaaacaactattctcactaacaactaaaagta 47290524  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  47290525 attctcaccaa 47290535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 4485287 - 4485368
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    |||||||||  ||||||||||| | | |||||  ||||| ||||||||| | |||||||||||||  | |||||||||||||    
T  4485287 ccttagtgggcttaacccactcaatcacaattttaaaatgtttctacacgcttaacggtaaaatactaacaacggtcactta 4485368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 16478606 - 16478537
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||| | ||||||||    
T  16478606 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaactcagtaaaataa 16478537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 26009782 - 26009713
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| ||||||||| |||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  26009782 aacggtaaaatataaccaacggttact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 26009713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 397
Target Start/End: Original strand, 36053273 - 36053378
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||| ||| ||||||||| ||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  36053273 ataacggtaaaatgtcactaacggttact-aaatggtaatatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 36053369  T
Q  389 attctcacc 397  Q
    |||||||||    
T  36053370 attctcacc 36053378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 371726 - 371806
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || | ||||| |||||| ||||| ||||| ||||| ||||||||  |||||||||    
T  371726 aacggtaaaatataaccaacggtcact--aacgctaaaa-actaatcactacactagtgacttagtaaaataagggttctcact 371806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 11288066 - 11288173
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    |||| |||||||  ||||||||||||| ||| |||||||   ||| |  ||| ||||||||||| ||||| ||| |||||||||   ||||||| |||||    
T  11288066 aacgttaaaatactaccaacggtcact-aaacggtaaaaccttaaatgttactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaat 11288164  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  11288165 tctcaccaa 11288173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 13910667 - 13910587
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||| |||||||||  || ||||||| |||||| | ||| ||||||||||| ||||||||  |||||||||    
T  13910667 aacggtaaaatataaccgacggtcact--aacggtaaaa-actaatcattacactagtaacttagtaaaataagggttctcact 13910587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 14250538 - 14250458
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || || |||||||  || ||||||||| |||| ||||| ||||||||||| ||||||||  |||||||||    
T  14250538 aacggtaaaatataacgaatggtcact--aacggtaaaata-taatcactacactagtaacttagtaaaataagggttctcact 14250458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 14271632 - 14271576
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa 237  Q
    |||||||||||||||||  ||||||||  |||||| | ||||||||||||| |||||    
T  14271632 attttctcttaagacaaggcttatataggctattcctctaatgggcttaaccctaaa 14271576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 46474632 - 46474672
Alignment:
Q  331 actaattactaccctagtaacttaataaaataacagttctc 371  Q
    |||||||||||| ||||||||||| |||||||| |||||||    
T  46474632 actaattactacactagtaacttagtaaaataatagttctc 46474672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 181 - 399
Target Start/End: Complemental strand, 16887527 - 16887309
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||| ||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||| || ||||| |||    
T  16887527 attttctattaagacaacccttatatagtctactctcttaatgggcttaaccctaaaccttagtggacttaacccactctaactcaaatctaaaatgttt 16887428  T
Q  281 ctacactcataacggtaaaat-atcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgcca 379  Q
    ||||||||| |||||||||||  |   |||||||||||| || |||||||||||||||||||| |||| |||||| ||||||||  |||||||||   ||    
T  16887427 ctacactcacaacggtaaaatgctatacaacggtcactt-aacggtaaaatactaattactactctagcaacttagtaaaataatggttctcactaaaca 16887329  T
Q  380 ctaaacgtaattctcaccaa 399  Q
    |||||  |||||||||||||    
T  16887328 ctaaaaataattctcaccaa 16887309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 25366981 - 25366842
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||| |||||||| |||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||    
T  25366981 attttctcttaagacaactcttatatagtctattctcttaatgagcttaaccctaaaccttagtggacttaacccactccaactcaattccaaaatgttt 25366882  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||||| || ||||||||| ||  |  |||||||||||||    
T  25366881 ctacacacacaacggtaaattactaataacggtcacttaa 25366842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 15740732 - 15740837
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||| |||    
T  15740732 attttctcttaagacaacccttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccactcctactcaattctaaaatgttt 15740831  T
Q  281 ctacac 286  Q
    ||||||    
T  15740832 ctacac 15740837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 196 - 363
Target Start/End: Original strand, 25920140 - 25920306
Alignment:
Q  196 aacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacgg 295  Q
    ||||||||| || |||||||| |||||||||||||| ||||||||||| ||| |||| |||||| |||||||||| ||||| ||||||||||| |||||     
T  25920140 aacccttatgtagtctattctcttaatgggcttaaccctaaaccttagaggacttaatccactctaactcaattctaaaatgtttctacactcgtaacga 25920239  T
Q  296 taaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||| ||  |  ||||||||| |||| ||||||||||||||||||| ||||||||||||  |||||||    
T  25920240 taaattactaataacggtcac-taaacggtaaaatactaattactatcctagtaacttagcaaaataa 25920306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 21410784 - 21410645
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||| ||||  ||||| |||    
T  21410784 attttctcttaagacaacccttatatagtctattctattaatgggcttaaccctaaaccttagtggacttaacccacttcaacttaattataaaatgttt 21410685  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||||| |  ||||||||| ||  |  |||||||||||||    
T  21410684 ctacacactcaacggtaaattactaataacggtcacttaa 21410645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 21413925 - 21413820
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||||||| || |||||||||||| |||||||||| ||||||||||| ||||| |||    
T  21413925 attttctcttaagacaacccttatatagtctattctattaatgagcttaaccctgaaccttagtggacttaacccacttcaactcaattctaaaatgttt 21413826  T
Q  281 ctacac 286  Q
    ||||||    
T  21413825 ctacac 21413820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 18381545 - 18381426
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||  |||||||| | |||||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||   |||    
T  18381545 attttctcttaagacaagtcttatatagtttattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaacttaattctaaa--tttt 18381448  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  18381447 ctacactcacaacggtaaaata 18381426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 22361500 - 22361378
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||||||   |||||| | ||||||||||||||||||| |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  22361500 attttctcttaagacaagtcttatatgggctattcctctaatgggcttaactctaaaaccttagtggacttaacccactcaaacacaattctaaaatgtt 22361401  T
Q  280 tctacactcataacggtaaaata 302  Q
    |||||||||| ||||||||||||    
T  22361400 tctacactcacaacggtaaaata 22361378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 21623683 - 21623804
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtgga-tttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||| ||| |||||||| |||||||||||||| ||||| |||| ||||  |||||||||||||||| ||||| ||||| ||    
T  21623683 attttctcttaagacaagtcttaaatagtctattctcttaatgggcttaaccctaaaacttaatggaccttaacccactccaactgaattctaaaatgtt 21623782  T
Q  280 tctacactcataacggtaaaat 301  Q
    |||||||||| || ||||||||    
T  21623783 tctacactcacaaaggtaaaat 21623804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 363
Target Start/End: Original strand, 14128680 - 14128860
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||||||| |||||||  ||||||||  |||||| | ||||||||||||| |||| ||||||||||| ||||||||||||||| |||||  ||||| ||    
T  14128680 attttctct-aagacaaggcttatataggctattcctctaatgggcttaac-ctaataccttagtggacttaacccactccaacacaattgtaaaatgtt 14128777  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||   | |||||||||||||  |  ||||| ||||| || |||||||||| ||||||||| ||||||||||| ||||||||    
T  14128778 tctactaacttaacggtaaaatactaataacggccactt-aacggtaaaataccaattactacactagtaacttagtaaaataa 14128860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 363
Target Start/End: Original strand, 14152845 - 14153007
Alignment:
Q  200 cttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaa 298  Q
    ||||||||  |||||| | |||| |||||||| |||| ||||||||||| ||||||||||| ||| |||||  ||||| |||||||   |  ||||||||    
T  14152845 cttatataggctattcctctaataggcttaac-ctaataccttagtggacttaacccactctaacacaattgtaaaatgtttctactaactcaacggtaa 14152943  T
Q  299 aatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||  |  |||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||    
T  14152944 aatactaataacggtcacttaac-ggtaaaatactaattactacactagtaacttagtaaaataa 14153007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 15079411 - 15079327
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||| ||||||||| ||||| |||||||||||| |||| |||||||    
T  15079411 ttaatgggcctaaccctaaagcttagtggacttaacccactcccactcaattctaaaatgtttctacactcacaacgataaaata 15079327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 33325241 - 33325322
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||||||||||| ||||| |||| |||||| |||||||||||    
T  33325241 ttaatgggcctaaccctaaaacttagtggacttaacccactccaactcaattctaaaatgtttccacactc-taacggtaaaa 33325322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 35135711 - 35135630
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||||||||||| ||||| |||| |||||| |||||||||||    
T  35135711 ttaatgggcctaaccctaaaacttagtggacttaacccactccaactcaattctaaaatgtttccacactc-taacggtaaaa 35135630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 16299628 - 16299522
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||  ||| ||||  ||||    
T  16299628 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcactaaccattaaaaataat 16299531  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  16299530 tctcaccaa 16299522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 18629344 - 18629190
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||| ||  ||||||||  |||||||| |||||||| |||| ||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  18629344 attttctcttaagataaggcttatataggctattcttctaatgggcctaaccctaatgccttagtggacttaacccactcaaacacaattctaaaatgtt 18629245  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaa 335  Q
    ||||| | |  ||||||||||||  |  |||| |||||| || |||||||||||||    
T  18629244 tctactcactcaacggtaaaatactaataacgatcactt-aacggtaaaatactaa 18629190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 17082876 - 17082814
Alignment:
Q  240 ttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    |||||||| ||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||    
T  17082876 ttagtggacttaacccactccaacacaattctaaaatgtttctacactcttaacggtaaaata 17082814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 17547415 - 17547311
Alignment:
Q  183 tttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatttc 281  Q
    |||||||||||||||  ||||||||  |||||| | ||||||||||||| ||||  |||||||||| ||||||||||  ||| |||||| ||||| ||||    
T  17547415 tttctcttaagacaagacttatataggctattcctctaatgggcttaaccctaattccttagtggacttaacccactaaaacacaattctaaaatgtttc 17547316  T
Q  282 tacac 286  Q
    |||||    
T  17547315 tacac 17547311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 25654694 - 25654758
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    |||||||||| ||||||||||| ||| |||||| ||||| ||||||||||| |||||||||||||    
T  25654694 ccttagtggacttaacccactcaaacacaattctaaaatgtttctacactcttaacggtaaaata 25654758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 18433271 - 18433384
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| |||||||||||||||||| ||||||||| |||| ||||||||  |||||  ||| ||||||||||| ||||| |||  ||||||||  |||||||    
T  18433271 cactaataacggtaaaatatcacaaacggtcac-taaacggtaaaatcttaatt-ttactctagtaacttagtaaaacaactattctcactaaccactaa 18433368  T
Q  384 acgtaattctcaccaa 399  Q
    | |||| |||||||||    
T  18433369 aagtaactctcaccaa 18433384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 18399587 - 18399648
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaact 352  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||| ||| |||||||||    
T  18399587 taacggtaaaatatcaccaatggtcac-taaacggtaaaatactaattattactctagtaact 18399648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 21623824 - 21623893
Alignment:
Q  293 cggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||  | ||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||    
T  21623824 cggtaaaatactaacaacggtcacttaac-ggtaaaatactaattactaccctagtaacgtagtaaaataa 21623893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 396
Target Start/End: Original strand, 22441579 - 22441683
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||| |||||||| ||||| ||||||||  ||||| |||| ||||||||||| ||||| ||| |||||||||   ||||||| ||||    
T  22441579 taacggtaaaatgtcactaacggtca-ttaaacggtaaaatcttaatt-ctactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaa 22441676  T
Q  390 ttctcac 396  Q
    |||||||    
T  22441677 ttctcac 22441683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 31467308 - 31467171
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaac-cttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||  ||||||||  |||||||   |||||||||||| ||||   ||||||||  |||| |||||| | |||||||| |||||||||    
T  31467308 ttttctcttaagacaaggcttatatagactattctca-aatgggcttaaccctaatgtcttagtgggcttaaaccactcaatctcaattctaaaatattt 31467210  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    |||||| | |||||||||||||  | ||||| |||||||    
T  31467209 ctacacacttaacggtaaaatactaacaacgatcactta 31467171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 31628834 - 31628942
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||  |||||  ||  ||||||||||| ||||| ||| |||||||||   ||||||| |||    
T  31628834 ataacggtaaaatgtcaccaacggtcact-aaacggtaaaatcttaattt-tattctagtaacttagtaaaacaacggttctcactaatcactaaaagta 31628931  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  31628932 attctcaccaa 31628942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 18777776 - 18777883
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||||||||||||| |||| ||||||||  |||||  ||| |||||| |||| ||||| ||| |||||||||   ||||||| ||||    
T  18777776 taacggtaaaatgtcaccaacggtcac-taaacggtaaaatcttaatt-ttactctagtatcttagtaaaacaacggttctcactaatcactaaaagtaa 18777873  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  18777874 ttctcaccaa 18777883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 22361362 - 22361255
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||  | ||||||||||||||  ||||||||| |||||||||||||||||||| | | ||||||  |||||||||   |||||||  |||    
T  22361362 taacggtaaaatactaacaacggtcacttaac-ggtaaaatattaattactaccctagtaactgagtcaaataatggttctcactaaacactaaa-ataa 22361265  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  22361264 ttctcaccaa 22361255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 18381410 - 18381327
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||  | ||||| |||||||   |||||||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  18381410 taacggtaaaatactagcaacgatcacttatc-ggtaaaatactaattactacactagtaacttagtaaaataatggttctcact 18381327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 373
Target Start/End: Original strand, 19629884 - 19630006
Alignment:
Q  249 ttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagt 348  Q
    |||||||| || ||| |||||| ||||  |||||| || |  ||||||||||||| ||||||||| ||| ||| ||||||| |||||| ||||| |||||    
T  19629884 ttaacccattctaacacaattctaaaaagtttctatacactcaacggtaaaatataaccaacggtaact-aaacggtaaaa-actaatcactacactagt 19629981  T
Q  349 aacttaataaaataacagttctcac 373  Q
    |||||| ||||||||  ||||||||    
T  19629982 aacttagtaaaataagggttctcac 19630006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 18583948 - 18584061
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| ||||||||||||| ||||||| ||||||| ||||||||||||   || || ||| ||||||||||| |||||||||  ||||||||   ||||||    
T  18583948 cactaataacggtaaaatgtcaccaatggtcact-aaatggtaaaatctcaacta-tactctagtaacttagtaaaataactattctcactaatcactaa 18584045  T
Q  384 acgtaattctcaccaa 399  Q
    | ||||||| ||||||    
T  18584046 aagtaattcccaccaa 18584061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 18838872 - 18838791
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| || ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  18838872 aacggtaaaacataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 18838791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 16232505 - 16232587
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  16232505 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 16232587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 17547279 - 17547210
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    |||||||||||||  | ||||| | ||||||| |||||||||||||||||||| ||||||||||| |||||    
T  17547279 taacggtaaaatactaacaacgattacttaaa-ggtaaaatactaattactacactagtaacttagtaaaa 17547210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 19610630 - 19610712
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  19610630 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 19610712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 25366844 - 25366775
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    |||||||||||||||| || ||||||| |||  |||||||||||||||| ||||| ||||||||| |||||    
T  25366844 taacggtaaaatatcaacatcggtcacataac-ggtaaaatactaattattaccccagtaacttagtaaaa 25366775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 33538104 - 33537983
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | |||||| |  ||| ||||  |||||||||| |||||||||| |||| |||||| ||||  ||    
T  33538104 attttctcttaagacaatgcttatataggctattcctctaatggacccaaccctaatgccttagtggacttaacccact-caacacaattctaaaacgtt 33538006  T
Q  280 tctacactcataacggtaaaata 302  Q
    ||||||||| ||| |||||||||    
T  33538005 tctacactcttaatggtaaaata 33537983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 16376032 - 16375963
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  16376032 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 16375963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 16383356 - 16383287
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  16383356 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 16383287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 16107159 - 16107230
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaatta-ctaccctagtaacttaataaaa 360  Q
    |||||||||||||||||||||||||||| |||| |||||||| ||| |||  ||| ||||||||||| |||||    
T  16107159 ataacggtaaaatatcaccaacggtcac-taaacggtaaaatcctagttatttactctagtaacttagtaaaa 16107230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 16555771 - 16555691
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  16555771 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 16555691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 16632327 - 16632247
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  16632327 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 16632247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 1556621 - 1556702
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| || ||||||||||||| ||| ||||||| |||||| ||||  ||||||||||| ||||||||  |||||||||    
T  1556621 aacggtaaaacataaccaacggtcact-aaacggtaaaa-actaatcactaaactagtaacttagtaaaataagggttctcact 1556702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 12415471 - 12415390
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| |||||||||||| |||| ||||||| |||||| |||||  |||||||||| ||||||||  |||||||||    
T  12415471 aacggtaaattataaccaacggtcac-taaacggtaaaa-actaatcactacattagtaacttagtaaaataagggttctcact 12415390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 13620436 - 13620329
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||||||| |||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  13620436 ataacggtaaaatgtcaccaacagtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 13620340  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  13620339 attcccaccaa 13620329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 14625770 - 14625691
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||||||| ||||||||| |||  || ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  14625770 aacggtaaaatataaccaacggttact--aacggtaaaa-actaatcactacactagtaacttagtaaaataaaggttctcac 14625691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 15741849 - 15741768
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||| ||||  |||||||| || ||||||||  |||||||||    
T  15741849 aacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactatactagtaacatagtaaaataagggttctcact 15741768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 16814639 - 16814564
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  16814639 gtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcac 16814564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 19982911 - 19982804
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  19982911 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 19982815  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  19982814 attcccaccaa 19982804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 22582356 - 22582313
Alignment:
Q  331 actaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||    
T  22582356 actaattactacactagtaacttagtaaaataatagttctcact 22582313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 22585146 - 22585103
Alignment:
Q  331 actaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||    
T  22585146 actaattactacactagtaacttagtaaaataatagttctcact 22585103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 22589977 - 22589934
Alignment:
Q  331 actaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||    
T  22589977 actaattactacactagtaacttagtaaaataatagttctcact 22589934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 10489319 - 10489388
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  10489319 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 10489388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 15079333 - 15079284
Alignment:
Q  325 taaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||||||   |||||||||| ||||||||| |||||||||    
T  15079333 taaaatactaattactattatagtaacttagtaaaataacggttctcact 15079284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 9e-49; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 181 - 399
Target Start/End: Original strand, 48422090 - 48422307
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||  |||||||| | |||||| |||||||||||||| ||||| ||||||||| |||| ||||||||||||||||| ||||| |||    
T  48422090 attttctcttaagacaaatcttatatagtatattctcttaatgggcttaaccctaaatcttagtggacttaaaccactccaactcaattctaaaatgttt 48422189  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccac 380  Q
    |||||| | | |||||||| ||  |  |  |||||||| || ||||||||| |||||||||||||||||||||| ||||||||| |||||||||  ||||    
T  48422190 ctacacactttacggtaaattactaatattggtcactt-aacggtaaaatattaattactaccctagtaacttagtaaaataacggttctcactaaccac 48422288  T
Q  381 taaacgtaattctcaccaa 399  Q
    |||| ||||||||||||||    
T  48422289 taaaagtaattctcaccaa 48422307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 181 - 346
Target Start/End: Complemental strand, 17960048 - 17959884
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| |||    
T  17960048 attttatcttaagacaacccgtatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaaatctaaaatgttt 17959949  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactacccta 346  Q
    ||||||||| |||||||||||   || |||||| |||||| | |||||||||||||||||||||||    
T  17959948 ctacactcacaacggtaaaatgctactaacggttacttaact-gtaaaatactaattactacccta 17959884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 39657036 - 39657175
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||    
T  39657036 attttctcttaagacaacccttatataatttattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaattctaaaatgttt 39657135  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
     ||||| |  ||||||||| ||  |  |||||||||||||    
T  39657136 ttacacactcaacggtaaattactaataacggtcacttaa 39657175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 374
Target Start/End: Original strand, 34560368 - 34560561
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||||| |||| |||||||| ||||  ||||||| || ||||| ||||| ||| |||||  ||||| ||    
T  34560368 attttctcttaagacaaggcttatataggctattcttctaataggcttaaccctaatgccttagttgacttaacacactcaaacacaattttaaaatgtt 34560467  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| |||||||||||||  | ||| ||||||||||  |||||||||||||  ||||| ||||||||||||||||||||  |||||||||    
T  34560468 tctacactcttaacggtaaaatactaacaatggtcacttaac-ggtaaaatactaacaactacactagtaacttaataaaataatggttctcact 34560561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 38810748 - 38810630
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||| |||| ||||| |||    
T  38810748 attttctcttaagacaacccttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaatccactccaactccattctaaaatgttt 38810649  T
Q  281 ctacactcataacggtaaa 299  Q
     ||||| |  |||||||||    
T  38810648 ttacacactcaacggtaaa 38810630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 220 - 399
Target Start/End: Complemental strand, 3576130 - 3575951
Alignment:
Q  220 aatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    ||||||||||||  |||| ||||| |||| ||||||||||| ||| |||||| ||||| |||||||||||| ||||||||||||  | ||||||||||||    
T  3576130 aatgggcttaaccataaatccttaatggacttaacccactcaaacacaattctaaaatgtttctacactcacaacggtaaaatactaacaacggtcactt 3576031  T
Q  319 aaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
     ||  |||||||||||||||| || ||||||||||| ||||||||  |||||||||   |||||||  |||||||||||||    
T  3576030 -aaccgtaaaatactaattacaacactagtaacttagtaaaataatggttctcactaaacactaaaaataattctcaccaa 3575951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 11881954 - 11881835
Alignment:
Q  181 attttctcttaagacaacccttatatattctattctt-ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||| |||| ||| |||||| || |||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||| ||    
T  11881954 attttctcttaagacaactcttaaatagtctatttttcttaatgggcttaaccctaaaccttagtggacttaacccactccaacttaattctaaaatgtt 11881855  T
Q  280 tctacactcataacggtaaa 299  Q
    ||||||| |  |||||||||    
T  11881854 tctacacactcaacggtaaa 11881835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 11060606 - 11060498
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| | ||||||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||| |||||||||   |||||||  |||    
T  11060606 taacggtaaaattttaccaacggtcact-aaacggtaaaatattaattactactctagtaacttagtaaaataacggttctcactaaacactaaaaataa 11060508  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  11060507 ttctcaccaa 11060498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 14058949 - 14058841
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||  |||| ||||| |||||||||| || ||||| ||||||| ||||  ||    
T  14058949 attttctcttaagacaacccttatatagtctactctcttaatgggcttaaccttaaacccttaatggatttaactcattccaaatcaattctaaaaagtt 14058850  T
Q  280 tctacactc 288  Q
    |||||||||    
T  14058849 tctacactc 14058841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 17205323 - 17205431
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||||||||||| || ||| | |||||||| |||||||||| |||||||||||||||||||||| ||||||||  |||||||||   |||||||  |||    
T  17205323 taacggtaaaataccaacaatgatcacttaa-tggtaaaatattaattactaccctagtaacttagtaaaataatggttctcactaaacactaaaaataa 17205421  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  17205422 ttctcaccaa 17205431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 17192055 - 17192175
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||| |||||||||||| ||||||||   ||| | | ||||||||||||| ||||| |||||||||| ||||||||||| ||  |||||| ||||| ||    
T  17192055 attttttcttaagacaacgcttatataggttatgcctctaatgggcttaaccctaaaaccttagtggacttaacccactcaaatacaattctaaaatgtt 17192154  T
Q  280 tctacactcataacggtaaaa 300  Q
    |||||||||| ||||||||||    
T  17192155 tctacactcacaacggtaaaa 17192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 16880762 - 16880844
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    |||||||||||||  ||||||||||||||||  ||||||||||| |||||||| ||||||||||| ||||||||| ||||||||    
T  16880762 taacggtaaaatactaccaacggtcacttaac-ggtaaaatactgattactactctagtaacttagtaaaataacggttctcac 16880844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 14081041 - 14081143
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||| ||||| |||| |||| |||||||| ||||||| ||||| ||||| |||||||||||| ||||||||||||  |  ||||||||||    
T  14081041 ttaatgggcctaaccctaaagcttaatggacttaacccaatccaacttaattctaaaatttttctacactcacaacggtaaaatactattaacggtcact 14081140  T
Q  318 taa 320  Q
    |||    
T  14081141 taa 14081143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 302
Target Start/End: Original strand, 12032062 - 12032146
Alignment:
Q  219 taatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    ||||||||||||||||||| |||||||||| ||||||||||| | | |||||| ||||| |||||| ||||| ||||||||||||    
T  12032062 taatgggcttaactctaaaaccttagtggacttaacccactcaaccacaattctaaaatgtttctaaactcacaacggtaaaata 12032146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 14285598 - 14285704
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||||||||| || |||||||| ||||||||  |||||||||   |||||||  ||||    
T  14285598 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaattactacactggtaacttagtaaaataatggttctcactaaacactaaaaataat 14285695  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  14285696 tctcaccaa 14285704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 15879020 - 15879127
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||  | ||| ||||||||||  ||||||||||||||||||||||||| |||||| ||||| ||| |||||||||   |||||||  ||||    
T  15879020 aacggtaaaatactagcaatggtcacttaac-ggtaaaatactaattactaccctaggaacttagtaaaacaacggttctcactaaacactaaaaataat 15879118  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  15879119 tctcaccaa 15879127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 47784456 - 47784377
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    ||||||| |||| ||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||| |  |||||||||    
T  47784456 aatgggcctaaccctaaagcttagtggatttaacccacttcaactcaattctaaaatgtttctacacactcaacggtaaa 47784377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 15876565 - 15876638
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacc 254  Q
    |||||||||||||| ||  |||||||| |||||||| |||||||||||||| |||||| |||||||| ||||||    
T  15876565 attttctcttaagataagtcttatatagtctattctcttaatgggcttaaccctaaactttagtggacttaacc 15876638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 23492992 - 23493075
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||||| |||||||||||| |||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  23492992 ataacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 23493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 15521541 - 15521632
Alignment:
Q  249 ttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattacta 341  Q
    |||||||||||||||||||||| ||||| |||||||||||  ||| |||||| |  | |||||||||||| || |||||||||||||| ||||    
T  15521541 ttaacccactccaactcaattctaaaatgtttctacactctaaacagtaaaacactaacaacggtcactt-aacggtaaaatactaataacta 15521632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 39657173 - 39657256
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||||| |||||||||| |||  |||||||||||||||| ||||| |||||||||  |||||||  |||||||||    
T  39657173 taacggtaaaatatcaacaacggtcacataac-ggtaaaatactaattattaccccagtaacttagcaaaataatggttctcact 39657256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 40939675 - 40939755
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaa 298  Q
    ||||||||| |||||||||| |||| |||||||||||||  ||||||||| || |||||||||||| || || ||||||||    
T  40939675 ttaatgggcctaactctaaagcttaatggatttaacccatcccaactcaactctaaaatatttctatacacacaacggtaa 40939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 12032164 - 12032270
Alignment:
Q  292 acggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaatt 391  Q
    |||||||||||  | |||| |||||||||  |||||||||||||||||||| ||||||||||| ||||||||  |||||||||   |||||||  |||||    
T  12032164 acggtaaaatactaacaacagtcacttaac-ggtaaaatactaattactactctagtaacttagtaaaataatggttctcactaaacactaaaaataatt 12032262  T
Q  392 ctcaccaa 399  Q
    ||| ||||    
T  12032263 ctcgccaa 12032270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 399
Target Start/End: Complemental strand, 12487477 - 12487290
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||||| || || ||||| |||||||| ||  |||||||||| | |  |||||||||||    
T  12487477 ttaatgggcctaaccctaaagcttagtggacttaacccactccaacttaaatctaaaatgtttctacattctaaacggtaaaaca-ctacaacggtcact 12487379  T
Q  318 taaatggtaaaat-------actaattactaccctagtaactta-ataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    | || ||||||||       |||||| ||||   ||||||||||   |||||||| |||||||||  |||||||| ||||||||||||||    
T  12487378 t-aacggtaaaattctagtaactaatcactatgatagtaacttagcaaaaataacggttctcactaaccactaaaggtaattctcaccaa 12487290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 19306430 - 19306512
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    |||||||||||||  |  |||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||  ||||||||    
T  19306430 taacggtaaaatactaataacggtcacttaac-ggtaaaatactaattactacactagtaacttagtaaaataatggttctcac 19306512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 34438958 - 34438845
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| |||||||||||||||||| ||||||||| |||| ||||||||  |||||  ||| ||||||||||| ||||| | | |||||||||   ||||||    
T  34438958 cactaataacggtaaaatatcactaacggtcac-taaacggtaaaatcttaatt-ttactctagtaacttagtaaaacatcggttctcactaatcactaa 34438861  T
Q  384 acgtaattctcaccaa 399  Q
    | ||||||||||||||    
T  34438860 aagtaattctcaccaa 34438845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 11328661 - 11328595
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctac 284  Q
    ||||||||| |||| ||||| ||||||||| ||||||||||| |||||||||| ||||| |||||||    
T  11328661 ttaatgggcctaaccctaaagcttagtggacttaacccactctaactcaattctaaaatgtttctac 11328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 55440555 - 55440473
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    ||||||| |||||||||  |||| ||||||||||||| | | ||||||||| ||||| |||||||||||| |||| |||||||    
T  55440555 aatgggcctaactctaaggcttaatggatttaacccatttccactcaattctaaaatgtttctacactcacaacgataaaata 55440473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 11881816 - 11881744
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||  | ||||||||||||||  |||||||||||||||||||| |||||||||||  |||||||    
T  11881816 taacggtaaaatactaacaacggtcacttaac-ggtaaaatactaattactacactagtaacttagcaaaataa 11881744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 13301205 - 13301085
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||  ||||||||  ||| || | |||||| |||||| |||| || |||||||| ||||||||||||||| |||||| ||||| |||    
T  13301205 ttttctcttaagacaatgcttatataggctagtcctctaatggtcttaac-ctaatactttagtggacttaacccactccaacacaattctaaaatgttt 13301107  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||| |  |||| ||||||||    
T  13301106 ctacatttttaacagtaaaata 13301085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 13311861 - 13311741
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||  ||||||||  ||| || | |||||| |||||| |||| || |||||||| ||||||||||||||| |||||| ||||| |||    
T  13311861 ttttctcttaagacaatgcttatataggctagtcctctaatggtcttaac-ctaatactttagtggacttaacccactccaacacaattctaaaatgttt 13311763  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||| |  |||| ||||||||    
T  13311762 ctacatttttaacagtaaaata 13311741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 16880673 - 16880742
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacact 287  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||||| || || ||||| ||||||||||    
T  16880673 ttaatgggcctaaccctaaagcttagtggacttaacccactccaacttaaatctaaaatgtttctacact 16880742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 17192193 - 17192257
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaa 355  Q
    ||||||||||||| || ||||||| ||||||  ||||||||| |||||||||||||||||||||||    
T  17192193 taacggtaaaataccaacaacggttacttaac-ggtaaaatattaattactaccctagtaacttaa 17192257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 30207863 - 30207927
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaactta 354  Q
    ||||||||||||||||| ||| |||||||| || ||||||||| |||| |||||||||||||||||    
T  30207863 ataacggtaaaatatcaacaatggtcactt-aacggtaaaatattaatgactaccctagtaactta 30207927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 11476821 - 11476715
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| |||||||||||| |||| ||||||| | |||| ||||| ||||||||||| ||||||||  |||||||||   || ||||  ||||    
T  11476821 aacggtaaaatataaccaacggtcac-taaacggtaaaa-attaatcactacactagtaacttagtaaaataatggttctcactaaacattaaaaataat 11476724  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  11476723 tctcaccaa 11476715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 40939775 - 40939858
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||  |||||||||||| |||| |||| ||||||||| ||||| || |||||||| ||||||||| ||| |||||    
T  40939775 taacggtaaaatactaccaacggtcac-taaacggtataatactaatcactactctggtaacttagtaaaataacggttttcact 40939858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 9302767 - 9302686
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  9302767 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 9302686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 19232405 - 19232512
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||||||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  19232405 ataacggtaaaatgtcactaacggtcact-aaatggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 19232501  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  19232502 attcccaccaa 19232512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 13954542 - 13954460
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  13954542 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 13954460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 14304692 - 14304753
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaact 352  Q
    ||||| ||||||||||||||| |||||| ||| |||||||||||||||| ||| |||||||||    
T  14304692 taacgataaaatatcaccaacagtcact-aaacggtaaaatactaattattactctagtaact 14304753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 45861416 - 45861498
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  45861416 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 45861498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 396
Target Start/End: Complemental strand, 6146371 - 6146268
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||| ||||| ||| |||||||||  |||||||| |||||    
T  6146371 aacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaattt-tactctagtaacttagtaaaacaacggttctcactaaccactaaaagtaat 6146274  T
Q  391 tctcac 396  Q
    ||||||    
T  6146273 tctcac 6146268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 6224763 - 6224682
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    |||||||||| |||| |||||| | | |||||| ||||| ||||||||| | |||||||||||||  | |||||||||||||    
T  6224763 ccttagtggacttaatccactcaatcacaattctaaaatgtttctacacacttaacggtaaaatactaacaacggtcactta 6224682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 12257447 - 12257370
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  12257447 ggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 12257370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 12953519 - 12953596
Alignment:
Q  222 tgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    ||||| |||| ||||| ||||||||| ||||||||||| | ||||| || ||||| ||| |||||||| |||||||||    
T  12953519 tgggcgtaaccctaaagcttagtggacttaacccactctagctcaaatctaaaatgtttttacactcacaacggtaaa 12953596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 14295986 - 14296035
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaa 267  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||||||||||    
T  14295986 ttaatgggcctaaccctaaagcttagtggatttaacccattccaactcaa 14296035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 14296085 - 14296193
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||  ||||||||| || |||| ||||||||| |||||| |||  |||||||||| ||||| ||| |||||||||   || ||||  |||    
T  14296085 taacggtaaaatactaccaacggtaac-taaacggtaaaatattaattattactttagtaacttagtaaaacaacggttctcactaaacagtaaaaataa 14296183  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  14296184 ttctcaccaa 14296193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 14301613 - 14301662
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaa 267  Q
    ||||||||| |||| ||||| |||||||||||||||||| ||||||||||    
T  14301613 ttaatgggcctaaccctaaagcttagtggatttaacccattccaactcaa 14301662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 14301712 - 14301820
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||  ||||||||| || |||| ||||||||| |||||| |||  |||||||||| ||||| ||| |||||||||   || ||||  |||    
T  14301712 taacggtaaaatactaccaacggtaac-taaacggtaaaatattaattattactttagtaacttagtaaaacaacggttctcactaaacagtaaaaataa 14301810  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  14301811 ttctcaccaa 14301820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 17140059 - 17140128
Alignment:
Q  219 taatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactc 288  Q
    |||||||| |||| ||||| ||||||||  |||||||||||||||| || || ||||| |||||||||||    
T  17140059 taatgggcctaaccctaaagcttagtgggcttaacccactccaacttaaatctaaaatgtttctacactc 17140128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 302
Target Start/End: Original strand, 17205214 - 17205307
Alignment:
Q  210 ctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    |||||| | ||||||||||||| ||||| |||||||||| ||||||||||| ||  |||||| ||||| |||||| ||||| ||| | ||||||    
T  17205214 ctattcctctaatgggcttaaccctaaaaccttagtggacttaacccactcaaatacaattctaaaatgtttctatactcacaacagaaaaata 17205307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 55192575 - 55192656
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    |||||| || |||| |||||  ||| ||||||||||||| ||||||| || || ||||| ||||||||| ||||||||||||    
T  55192575 ttaatgtgcataaccctaaaatttaatggatttaacccattccaacttaaatctaaaatgtttctacacacataacggtaaa 55192656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 384
Target Start/End: Complemental strand, 12559824 - 12559745
Alignment:
Q  305 accaacggtcacttaaatggtaaaatactaattactaccctagtaacttaata-aaataacagttctcactcgccactaaa 384  Q
    ||||||||||||||||  | |||||||| ||||||||| ||||||||||| || ||||||| ||||||||| | |||||||    
T  12559824 accaacggtcacttaac-gataaaataccaattactactctagtaacttagtataaataacggttctcactagacactaaa 12559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 14527778 - 14527710
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||| ||| ||||| |||| |||| ||||||||||||| ||||||| ||||| ||||| |||||||||    
T  14527778 ttaataggcctaactataaagcttaatggatttaacccattccaacttaattctaaaatgtttctacac 14527710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 14842210 - 14842140
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||| |||| ||||||| | |||| ||||| ||||||||||| ||||||||    
T  14842210 aacggtaaaatataaccaacggtcac-taaacggtaaaa-attaatcactacactagtaacttagtaaaataa 14842140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 15878951 - 15879003
Alignment:
Q  250 taacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    ||||||||||||||||||||| ||||| |||||||| ||| || |||||||||    
T  15878951 taacccactccaactcaattcaaaaatgtttctacagtcacaatggtaaaata 15879003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 16821753 - 16821833
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| | |||| ||||| ||||||||||| ||||||||  |||||||||    
T  16821753 aacggtaaaatataaccaacggtcact--aacggtaaaa-attaatcactacactagtaacttagtaaaataagggttctcact 16821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 19306350 - 19306398
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    |||||||||| |||||||||| ||||||||||| ||||| |||||||||    
T  19306350 ccttagtggacttaacccacttcaactcaattctaaaatgtttctacac 19306398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 49233056 - 49233136
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  49233056 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 49233136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 399
Target Start/End: Complemental strand, 14527680 - 14527570
Alignment:
Q  288 cataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgt 387  Q
    |||||||||||||||||||||||| |||| |||  ||||||||| ||| | |||  ||||||||||| | |||  || |||||||||    |||||| ||    
T  14527680 cataacggtaaaatatcaccaacgatcac-taatcggtaaaatattaacttctaatctagtaacttagttaaacgacggttctcactaaatactaaaagt 14527582  T
Q  388 aattctcaccaa 399  Q
    ||||||||||||    
T  14527581 aattctcaccaa 14527570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 15467993 - 15467914
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  15467993 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcac 15467914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 15936276 - 15936195
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||| |||   ||||||||||| ||||||||  |||||||||    
T  15936276 aacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactgtactagtaacttagtaaaataagggttctcact 15936195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 16933593 - 16933512
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| || || ||||||||||| ||||||||  |||||||||    
T  16933593 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcaccacactagtaacttagtaaaataagggttctcact 16933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 17522489 - 17522419
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    |||||||||||||   ||||||||||||||||  ||||||||| ||||| ||| |||||||||||| |||||    
T  17522489 ataacggtaaaattctaccaacggtcacttaac-ggtaaaatattaatttctaacctagtaacttagtaaaa 17522419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 28558808 - 28558915
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| |||||||||||||||||  || |||||||||   ||||||| |||    
T  28558808 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaataaaaccacggttctcactaatcactaaaagta 28558904  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  28558905 attcccaccaa 28558915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 374
Target Start/End: Complemental strand, 55440436 - 55440385
Alignment:
Q  323 ggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||| ||||| ||||||||||| ||||||||| ||| |||||    
T  55440436 ggtaaaatactaatcactactctagtaacttagtaaaataacggttttcact 55440385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 8268375 - 8268293
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | | |||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  8268375 ataacggtaaaatgtaatcaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 8268293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 8275475 - 8275393
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | | |||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  8275475 ataacggtaaaatgtaatcaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 8275393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 9590495 - 9590374
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||| |||||||||||  | ||||||  |||||| | |||||| |||||| |||| ||||||||||| |||||| |||| ||| |||||| ||||| ||    
T  9590495 attttttcttaagacaaggcctatataggctattcctctaatggtcttaac-ctaataccttagtggacttaacctactcaaacacaattctaaaatgtt 9590397  T
Q  280 tctacactcataacggtaaaata 302  Q
    ||||| | |  ||||||||||||    
T  9590396 tctactccctcaacggtaaaata 9590374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 12901732 - 12901656
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||| ||||||||||||| ||| ||||||| |||||| || || ||||||||||| ||||||||  ||||||||    
T  12901732 gtaaaatataaccaacggtcact-aaacggtaaaa-actaatcacgacactagtaacttagtaaaataagggttctcac 12901656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 17101980 - 17102088
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||| ||||||||||| ||| |||| |||||||| |||| |  ||| || |||||||| ||||| ||| |||||||||    |||||| |||    
T  17101980 ataacggtaaaacatcaccaacggccac-taaacggtaaaatgctaa-tgttactcttgtaacttagtaaaacaacggttctcactaatgactaaaagta 17102077  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  17102078 attctcaccaa 17102088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 54424657 - 54424765
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| ||||||||| |||| ||||||||  |||||  ||| ||||||| ||| ||||  |||  |||| |||  |||||||| |||    
T  54424657 ataacggtaaaatatcactaacggtcac-taaacggtaaaatcttaatt-ttactctagtaatttagtaaaccaactattcttactaaccactaaaagta 54424754  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  54424755 attctcaccaa 54424765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 19570291 - 19570184
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||| |||||||||| ||| ||||||||  || ||  ||| ||||||||||| ||||| ||| |||||||||   ||||||| ||||    
T  19570291 taacggtaaaatgtcactaacggtcact-aaacggtaaaatcttagttt-tactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaa 19570194  T
Q  390 ttctcaccaa 399  Q
    ||||| ||||    
T  19570193 ttctcgccaa 19570184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 319
Target Start/End: Complemental strand, 4145760 - 4145660
Alignment:
Q  220 aatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||||||| ||||  |||||||||  ||||||||||| | | ||| || ||||| ||||||||| | ||||| |||||||  | ||||||||||||    
T  4145760 aatgggcttaaccctaatgccttagtgggcttaacccactcaatcacaactctaaaatgtttctacacacttaacgataaaatactaacaacggtcactt 4145661  T
Q  319 a 319  Q
    |    
T  4145660 a 4145660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 9590318 - 9590250
Alignment:
Q  331 actaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    |||||||||||| ||||||||||| ||||||||  |||||||||   |||||||  |||| ||||||||    
T  9590318 actaattactacgctagtaacttagtaaaataatggttctcactaaacactaaaactaatcctcaccaa 9590250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 14304592 - 14304660
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||||||| ||||||| || |||| ||||||||||||| | |||||||  || ||||| |||||||||    
T  14304592 ttaatgggcctaactctcaaacttaatggatttaacccatttcaactcacatctaaaatgtttctacac 14304660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 18911609 - 18911689
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||| |||| |  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  18911609 aacggtaaaatataaccaacagtcatt--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 18911689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 19260469 - 19260369
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  19260469 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 19260373  T
Q  389 attc 392  Q
    ||||    
T  19260372 attc 19260369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 27840835 - 27840915
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||| ||||| |||  || ||||||| |||||||||||| || |||||||| ||||||||  |||||||||    
T  27840835 aacggtaaaatataacccacggttact--aacggtaaaa-actaattactacactggtaacttagtaaaataagggttctcact 27840915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 38810611 - 38810528
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||||| ||| ||||||  ||  |||||||||||||||| || || |||||||||  |||||||  |||||||||    
T  38810611 taacggtaaaatatcaacaatggtcacgcaac-ggtaaaatactaattattatcccagtaacttagcaaaataatggttctcact 38810528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 47784358 - 47784284
Alignment:
Q  290 taacggtaaaatatc--accaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||||   |||||| |||||||||  ||||||||||||||||||| |||| |||||||  |||||||    
T  47784358 taacggtaaaatatactaccaacagtcacttaac-ggtaaaatactaattactaacctaataacttagcaaaataa 47784284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 9e-49; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 181 - 399
Target Start/End: Original strand, 25305946 - 25306163
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||  |||| ||| ||||| || |||||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||| |||    
T  25305946 attttctcttaagacaagtcttaaatagtctatcctcttaatgggcttaaccctaaaccttagtggacttaatccactccaactcaattctaaaatgttt 25306045  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccac 380  Q
    ||||||||| ||||||||||||  |  |||  |||||| || ||||||||||||||||||||  |||||||||| |||||||| ||||||||||   |||    
T  25306046 ctacactcacaacggtaaaatactattaacaatcactt-aacggtaaaatactaattactactttagtaacttagtaaaataatagttctcactaaacac 25306144  T
Q  381 taaacgtaattctcaccaa 399  Q
    ||||  |||||||||||||    
T  25306145 taaaaataattctcaccaa 25306163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 181 - 374
Target Start/End: Complemental strand, 19668844 - 19668652
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| |      
T  19668844 attttctcttaagataacccttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaaatctaaaatgtca 19668745  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||| ||||| ||||||||  |  ||||||||||| || |||||||||||||||||||  ||||||||||| ||||||||  |||||||||    
T  19668744 ctacacttataacagtaaaatactattaacggtcactt-aacggtaaaatactaattactattctagtaacttagtaaaataatggttctcact 19668652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 24087190 - 24087070
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||| || |||||||||||||||||||||||||||| |||    
T  24087190 attttctcttaagacaacccttatatagtctattctcataatgggcttaaccctaaaccttagtagagttaacccactccaactcaattccaaaatgttt 24087091  T
Q  281 ctacactcataacggtaaaat 301  Q
    ||||||||| |||||||||||    
T  24087090 ctacactcacaacggtaaaat 24087070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 24294256 - 24294135
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||| || ||||| ||||| ||||| |||    
T  24294256 attttctcttaagacaacccttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaaccctctacaacttaattctaaaatgttt 24294157  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  24294156 ctacactcacaacggtaaaata 24294135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 320
Target Start/End: Complemental strand, 2981 - 2841
Alignment:
Q  180 aattttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||| ||||||||||||||||||| |||||||| |||||| |||||||  |||||||||||||| |||||||||| ||||||||||   |||| ||    
T  2981 aattttcttttaagacaacccttatatagtctattctcttaatgagcttaaccttaaaccttagtggacttaacccacttcaactcaattttgaaatgtt 2882  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||||||||| ||||||||||||  |  |||||||||||||    
T  2881 tctacactcacaacggtaaaatactattaacggtcacttaa 2841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 19660391 - 19660511
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||| |||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| |||    
T  19660391 attttctattaagataacccttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaaatctaaaatgttt 19660490  T
Q  281 ctacactcataacggtaaaat 301  Q
     || ||||| |||||||||||    
T  19660491 atatactcacaacggtaaaat 19660511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 24087053 - 24086980
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||    
T  24087053 taacggtaaaatatcaccaacggtcacttaaacggtaaaatattaattactactctagtaacttagtaaaataa 24086980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 43646408 - 43646530
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | |||||||| |||| |||| ||| ||||||| ||||||||||| ||| |||||| ||||| ||    
T  43646408 attttctcttaagacaagtcttatataggctattcctctaatgggcctaaccctaataccctagtggacttaacccactcaaacacaattctaaaatgtt 43646507  T
Q  280 tctacactcataacggtaaaata 302  Q
    |||| |||| |||||||||||||    
T  43646508 tctatactcttaacggtaaaata 43646530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 2155426 - 2155318
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||  | |||||||||||||   |||||||||||||||||||| ||||||||||| ||||||||  |||||||||   |||||||  |||    
T  2155426 taacggtaaaatactagcaacggtcacttatc-ggtaaaatactaattactacactagtaacttagtaaaataatggttctcactaaacactaaaaataa 2155328  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  2155327 ttctcaccaa 2155318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 7322066 - 7322181
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    |||||| || |||| ||||| ||||||||| ||||||| |||||| |||| || ||||| |||||||||||| |||| |||||||  || ||||||||||    
T  7322066 ttaatgagcctaaccctaaagcttagtggacttaacccgctccaattcaaatctaaaatgtttctacactcacaacgataaaatactactaacggtcact 7322165  T
Q  318 taaatggtaaaatacta 334  Q
    | || ||||||||||||    
T  7322166 t-aacggtaaaatacta 7322181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 24294088 - 24294012
Alignment:
Q  323 ggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    ||||||||||||||||||||||||||||||||  |||||||  |||||||||   ||||||| ||||||||||||||    
T  24294088 ggtaaaatactaattactaccctagtaacttagcaaaataaaggttctcactaaacactaaaagtaattctcaccaa 24294012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 24885150 - 24885254
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||   ||||| | ||||||||||||||||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  24885150 attttctcttaagacaaggcttatataggttattcctctaatgggcttaactctaatgccttagtggacttaacccactcaaacacaattctaaaatgtt 24885249  T
Q  280 tctac 284  Q
    |||||    
T  24885250 tctac 24885254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 341
Target Start/End: Original strand, 722939 - 723058
Alignment:
Q  219 taatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||| |||| ||||| |||| |||| |  ||||||||||||||||||| ||||| |||||||||||  |||||||||| |  | ||||||||||||    
T  722939 taatgggcctaaccctaaagcttattggact--acccactccaactcaattctaaaatgtttctacactctaaacggtaaaacactaacaacggtcactt 723036  T
Q  319 aaatggtaaaatactaattacta 341  Q
     || |||||||||||||| ||||    
T  723037 -aacggtaaaatactaataacta 723058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 399
Target Start/End: Original strand, 16936151 - 16936299
Alignment:
Q  249 ttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagt 348  Q
    |||||||| || ||| |||||| ||||  |||||| || |  ||||||||||||| |||||||||||| |||| ||||||| |||||| ||||| |||||    
T  16936151 ttaacccattctaacacaattctaaaaagtttctatacactcaacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactacactagt 16936248  T
Q  349 aacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    |||||| ||||||||  |||||||||   || ||||  |||||||||||||    
T  16936249 aacttagtaaaataagggttctcactaaacattaaaaataattctcaccaa 16936299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 399
Target Start/End: Original strand, 17006811 - 17006959
Alignment:
Q  249 ttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagt 348  Q
    |||||||| || ||| |||||| ||||  |||||| || |  ||||||||||||| |||||||||||| |||| ||||||| |||||| ||||| |||||    
T  17006811 ttaacccattctaacacaattctaaaaagtttctatacactcaacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactacactagt 17006908  T
Q  349 aacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    |||||| ||||||||  |||||||||   || ||||  |||||||||||||    
T  17006909 aacttagtaaaataagggttctcactaaacattaaaaataattctcaccaa 17006959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 341
Target Start/End: Original strand, 68541 - 68662
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    |||||||||  ||| ||||| ||||||||| |||||||||||||||| || || ||||| |||||||||||  |||||||||| | |  |||||||||||    
T  68541 ttaatgggccaaaccctaaagcttagtggacttaacccactccaacttaaatctaaaatgtttctacactctgaacggtaaaaca-ctacaacggtcact 68639  T
Q  318 taaatggtaaaatactaattacta 341  Q
    | || |||||||| ||||| ||||    
T  68640 t-aacggtaaaattctaataacta 68662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 25213679 - 25213760
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  25213679 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 25213760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 25602674 - 25602784
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattact-accctagtaacttaataaaataacagttctcactcgccactaaacgt 387  Q
    ||||||||||||| ||||||||||||||| ||| |||||||   |||||| | || ||||||||||| ||||| ||| |||||||||   ||||||| ||    
T  25602674 ataacggtaaaatgtcaccaacggtcact-aaacggtaaaaccttaattatttactctagtaacttagtaaaacaacggttctcactaatcactaaaagt 25602772  T
Q  388 aattctcaccaa 399  Q
    ||||||||||||    
T  25602773 aattctcaccaa 25602784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 23777687 - 23777607
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  23777687 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcac 23777607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 2843 - 2771
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||| |  | ||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||    
T  2843 taacggtaaaacactagcaacggtcacttaac-ggtaaaatactaattactacactagtaacttagtaaaataa 2771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 302
Target Start/End: Original strand, 19667040 - 19667160
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||| |||||  ||||||||  ||| || | ||||||| |||| ||||| ||||||||||| ||||||||||| ||| |||||| ||||| |||    
T  19667040 ttttctcttacgacaagtcttatataggctagtcctctaatgggattaa-tctaataccttagtggacttaacccactcaaacacaattctaaaatgttt 19667138  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||| ||  ||||||||||||    
T  19667139 ctacattctcaacggtaaaata 19667160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 23821404 - 23821296
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||||  |||| ||||| |||  |||||||||||||||| |||||||||||||||  |||||||   ||||||||   |||||||  |||    
T  23821404 taacggtaaaatatctacaacagtcacataac-ggtaaaatactaattattaccctagtaacttagcaaaataatgattctcactaaacactaaaaataa 23821306  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  23821305 ttctcaccaa 23821296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 23830483 - 23830375
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||||  |||| ||||| |||  |||||||||||||||| |||||||||||||||  |||||||   ||||||||   |||||||  |||    
T  23830483 taacggtaaaatatctacaacagtcacataac-ggtaaaatactaattattaccctagtaacttagcaaaataatgattctcactaaacactaaaaataa 23830385  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  23830384 ttctcaccaa 23830375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 25602575 - 25602656
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    ||||||||| ||||||| || |||| ||||||||||||| ||||||| |||||  |||| ||||||||| || |||||||||    
T  25602575 ttaatgggcctaactctcaaacttaatggatttaacccattccaacttaattctcaaatgtttctacacacacaacggtaaa 25602656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 2155490 - 2155442
Alignment:
Q  254 ccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  2155490 ccactccaactcaattctaaaatgtttctacactcacaacggtaaaata 2155442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 7507481 - 7507376
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| |||  |||||| |||||| ||||| ||||||||||| ||||||||  |||||||||   |||||||  ||||    
T  7507481 aacggtaaaatataaccaacggtcact-aaaccgtaaaa-actaatcactacactagtaacttattaaaataagggttctcactaaacactaaa-ataat 7507385  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  7507384 tctcaccaa 7507376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 22275368 - 22275438
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||| |||| ||||||| | |||||||||| ||||||||||| ||||||||    
T  22275368 aacggtaaaatataaccaacggtcac-taaacggtaaaa-attaattactacactagtaacttagtaaaataa 22275438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 22284601 - 22284707
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    |||| |||||||| |||||||||| || ||| ||||||| |||||||||||| ||||||||||| ||||||||  |||||| ||   |||||||  ||||    
T  22284601 aacgttaaaatataaccaacggtccct-aaacggtaaaa-actaattactacactagtaacttagtaaaataatggttctcgctaaacactaaaaataat 22284698  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  22284699 tctcaccaa 22284707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 5888281 - 5888200
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  5888281 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 5888200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 8891824 - 8891931
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||||||||||||||||| |||||||  ||||||||   ||||||| |||    
T  8891824 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--taccctagtaacttaatgaaataactattctcactaatcactaaaagta 8891920  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  8891921 attcccaccaa 8891931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 22762889 - 22762808
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    |||||||||||||  |||||||||||||| || ||| ||||| |||||||||| ||||||||| | ||||||||| ||||||||    
T  22762889 taacggtaaaatactaccaacggtcactt-aacggt-aaatattaattactactctagtaactcagtaaaataacggttctcac 22762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 28030860 - 28030779
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| ||  ||||||| |||||||||||  ||||||||||| ||||||||  |||||||||    
T  28030860 aacggtaaaatataaccaacggtcact-aagcggtaaaa-actaattactatactagtaacttagtaaaataatggttctcact 28030779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 19689053 - 19688971
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  19689053 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 19688971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 17367466 - 17367573
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||| |||||||||| ||| ||||||||  ||||| | || || |||||||| ||||| |||  ||||||||  |||||||| ||||    
T  17367466 taacggtaaaatgtcactaacggtcact-aaacggtaaaatcttaatttc-acgctggtaacttagtaaaacaactattctcactaaccactaaaagtaa 17367563  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  17367564 ttctcaccaa 17367573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 22762930 - 22762893
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttt 218  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  22762930 attttctcttaagacaacccttatatagtctattcttt 22762893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 28775445 - 28775376
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  28775445 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 28775376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 11230974 - 11230894
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  11230974 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 11230894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 22256493 - 22256598
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| |||||||| |||| ||| ||||||| | |||| ||||| ||||||||||| ||||||||  |||||||||   |||||||  ||||    
T  22256493 aacggtaaaatataaccaacggacact-aaacggtaaaa-attaatcactacactagtaacttagtaaaataatggttctcactaaacactaaa-ataat 22256589  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  22256590 tctcaccaa 22256598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 24685418 - 24685338
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  24685418 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 24685338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 42177608 - 42177528
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||| | |||||||||||||  || ||||||||| |||| ||||| ||||||||||| ||||||||  |||||||||    
T  42177608 aacggtaaaatctaaccaacggtcact--aacggtaaaata-taatcactacactagtaacttagtaaaataagggttctcact 42177528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 25875542 - 25875429
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| ||||||||||||| |||| ||||||||| |||| ||||||||  |||||  ||| ||||||||||| ||||| ||| |||| ||||    |||||    
T  25875542 cactaataacggtaaaatgtcactaacggtcac-taaacggtaaaatcttaatt-ttactctagtaacttagtaaaacaacggttcccactaattactaa 25875445  T
Q  384 acgtaattctcaccaa 399  Q
    | ||||||||||||||    
T  25875444 aagtaattctcaccaa 25875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 17396305 - 17396223
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||| ||||| ||||||||  |||||||||    
T  17396305 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtgacttagtaaaataagggttctcact 17396223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 27262353 - 27262430
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggt 296  Q
    ||||||||| ||||||| || |||| ||||||||||||| | |||||||| || ||||| ||||||||| || ||||||    
T  27262353 ttaatgggcctaactctcaaacttaatggatttaacccatttcaactcaa-tctaaaatgtttctacacacacaacggt 27262430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 28974598 - 28974676
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaa 298  Q
    ||||||| |||| ||||| |||  ||||||||||||| ||||| |||| || ||||| ||||||||| || ||||||||    
T  28974598 aatgggcctaaccctaaagcttcatggatttaacccattccaattcaaatctaaaatgtttctacacacacaacggtaa 28974676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 33128684 - 33128766
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  33128684 ataacggtaaaatgtaacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 33128766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 24826343 - 24826262
Alignment:
Q  291 aacggtaaa-atatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| |||| |||||||||||||  |||||||||  |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  24826343 aacggtaaacatataaccaacggtcact--aatggtaaac-actaatcactacactagtaacttagtaaaataagggttctcact 24826262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 21142490 - 21142570
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| |||||||||||||  || ||||||| |||||| |||||  |||||||||| ||||||||  |||||||||    
T  21142490 aacggtaaattataaccaacggtcact--aacggtaaaa-actaatcactacaatagtaacttagtaaaataagggttctcact 21142570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1932 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 1135 - 996
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||    
T  1135 attttctcttaagacaatccttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaattctaaaatgttt 1036  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    ||||||||| |||||||||||   || |||||||||||||    
T  1035 ctacactcacaacggtaaaatgctactaacggtcacttaa 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 183 - 399
Target Start/End: Complemental strand, 37956743 - 37956529
Alignment:
Q  183 tttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttct 282  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||| |||| ||||| |||||    
T  37956743 tttctcttaagacaacccttatatagtctattctcttaatgagcttaaccctaaaccttagtggacttaacccactccaactccattctaaaatgtttct 37956644  T
Q  283 acactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccacta 382  Q
    |||| |  ||||||||  ||  |  ||||||||||| || ||| |||||||||||| |||||||||||||||  |||||||  |||||||||   |||||    
T  37956643 acacactcaacggtaatttactaataacggtcactt-aacggt-aaatactaattattaccctagtaacttagcaaaataatggttctcactaaacacta 37956546  T
Q  383 aacgtaattctcaccaa 399  Q
    ||  |||||||||||||    
T  37956545 aaaataattctcaccaa 37956529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 40885300 - 40885180
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||| |||    
T  40885300 attttctcttaagacaacccttatatagtttattctcttaatgggctcaaccctaaaccttagtggacttaacccactccaactcaattcaaaaatgttt 40885201  T
Q  281 ctacactcataacggtaaaat 301  Q
    ||||||| | |||||||||||    
T  40885200 ctacacttacaacggtaaaat 40885180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 399
Target Start/End: Complemental strand, 34177382 - 34177157
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||||||| | ||||| |||||||||||||||| ||||| |||    
T  34177382 attttctcttaagacaacccttatatagtctattctcttaatggacttaaccctaaaccttagtgaacttaactcactccaactcaattctaaaatgttt 34177283  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaat-------actaattactaccctagtaactta-ataaaataacagttctca 372  Q
    ||||||    ||||||||| ||  |  ||||||||||| || ||||||||       |||||| |||||  ||||||||||   |||||||| |||||||    
T  34177282 ctacacattcaacggtaaattactaataacggtcactt-aacggtaaaattctaataactaatcactacgatagtaacttagcaaaaataacggttctca 34177184  T
Q  373 ctcgccactaaacgtaattctcaccaa 399  Q
    ||  |||||||| ||||||||||||||    
T  34177183 ctaaccactaaaagtaattctcaccaa 34177157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 47534814 - 47534692
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||| ||||||||  |||||  | ||||||| ||||| ||||| ||| | |||| |||||||||||||||||||||| ||||||||    
T  47534814 attttctcttaagacaactcttatataggctatttctctaatgggtttaaccctaaatcctcaatggacttaacccactccaactcaattctaaaatatt 47534715  T
Q  280 tctacactcataacggtaaaata 302  Q
    |||||||||| ||||||||||||    
T  47534714 tctacactcacaacggtaaaata 47534692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 41165697 - 41165582
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||  |||| ||| |||||||| |||||||||||||      ||||||||||| |||||| ||||||||||||||||||||| | |    
T  41165697 attttctcttaagacaagtcttaaatagtctattctcttaatgggcttaa------accttagtggacttaacctactccaactcaattccaaaatgtct 41165604  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||| | ||||||||||||    
T  41165603 ctacacttacaacggtaaaata 41165582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 399
Target Start/End: Complemental strand, 12244522 - 12244373
Alignment:
Q  249 ttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagt 348  Q
    |||||||||||||||| ||||| ||||| | |||||||||| ||||||||||||  || ||||||||| |||  |  ||||||||||||||||| |||||    
T  12244522 ttaacccactccaacttaattctaaaatgtctctacactcacaacggtaaaatactactaacggtcacgtaacggtaaaaatactaattactacactagt 12244423  T
Q  349 aacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    |||||| | || |||  |||||||||   |||||||  |||||||||||||    
T  12244422 aacttagt-aagtaatggttctcactaaacactaaaaataattctcaccaa 12244373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 360
Target Start/End: Original strand, 18276946 - 18277125
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaac-cttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||| ||  |||||| | |||  |||||||| ||||   |||| |||| ||||||||||| ||| |||||| ||||| ||    
T  18276946 attttctcttaagacaaggcttatttaggctattcctgtaacaggcttaaccctaatttcttactggacttaacccactcaaacacaattctaaaatgtt 18277045  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    ||||||||| |||||||||||||  |  ||||||||||| || |||||||||||||| || ||  |||||||||| |||||    
T  18277046 tctacactcttaacggtaaaatactaataacggtcactt-aacggtaaaatactaataaccacaatagtaacttagtaaaa 18277125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 399
Target Start/End: Original strand, 15045377 - 15045563
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||  ||||| ||||||||| |||||||||||||||| || || ||||| |||||||||||  |||||||||| | |  |||||||||||    
T  15045377 ttaatgggcctaaacctaaagcttagtggacttaacccactccaacttaaatctaaaatgtttctacactctaaacggtaaaaca-ctacaacggtcact 15045475  T
Q  318 taaatggtaaaat-------actaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    | || ||||||||       |||||| |||||  ||||||||||  |||||||  |||||||||  |||||||| ||||||||||||||    
T  15045476 t-aacggtaaaattctaataactaatcactacgatagtaacttagcaaaataattgttctcactaaccactaaaagtaattctcaccaa 15045563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 399
Target Start/End: Complemental strand, 15109047 - 15108861
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||  ||||| ||||||||| |||||||||||||||| || || ||||| |||||||||||  |||||||||| | |  |||||||||||    
T  15109047 ttaatgggcctaaacctaaagcttagtggacttaacccactccaacttaaatctaaaatgtttctacactctaaacggtaaaaca-ctacaacggtcact 15108949  T
Q  318 taaatggtaaaat-------actaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    | || ||||||||       |||||| |||||  ||||||||||  |||||||  |||||||||  |||||||| ||||||||||||||    
T  15108948 t-aacggtaaaattctaataactaatcactacgatagtaacttagcaaaataattgttctcactaaccactaaaagtaattctcaccaa 15108861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 320
Target Start/End: Complemental strand, 7964447 - 7964307
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||   ||||| | |||||||| |||| ||||  |||||||||| ||||||||||| |||  ||||| ||||| ||    
T  7964447 attttctcttaagacaaagcttatataggttattcctctaatgggcctaaccctaatgccttagtggacttaacccactcaaacaaaattctaaaatgtt 7964348  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    ||||||||| ||| |||||||||  | ||||| ||||||||    
T  7964347 tctacactcttaatggtaaaatactaacaacgatcacttaa 7964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 19821511 - 19821404
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactct-aaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||| ||| ||||| |||||||| | || | |  ||||||||||||| || ||||||||||||| |||||||||||||||||||||| ||||  |||    
T  19821511 ttttctcataaaacaactcttatataatataatttcctaatgggcttaacccttaaaccttagtggacttaacccactccaactcaattctaaaacgttt 19821412  T
Q  281 ctacactc 288  Q
    ||||||||    
T  19821411 ctacactc 19821404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 363
Target Start/End: Complemental strand, 52265207 - 52265064
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||| ||||| |||| |||||| ||| || |||||||||| || ||||| |||||| || |  ||||||||| ||  |  ||||||||||    
T  52265207 ttaatgggcctaaccctaaagcttaatggatt-aactcattccaactcaaatctaaaatgtttctatacactcaacggtaaattactaataacggtcact 52265109  T
Q  318 taaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||  ||||||||| ||||||||||| |||||||||| ||||||||    
T  52265108 taac-ggtaaaatattaattactaccttagtaacttagtaaaataa 52265064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 19021098 - 19021204
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||   || ||||  ||||    
T  19021098 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataat 19021195  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  19021196 tctcaccaa 19021204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 819542 - 819433
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| |  ||||||| ||| |||||||   |||||| ||| ||||||||||| ||||| ||| |||||||||   ||||||| |||    
T  819542 ataacggtaaaatatcactagtggtcact-aaacggtaaaaccataattattactctagtaacttagtaaaacaacggttctcactaatcactaaaagta 819444  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  819443 attctcaccaa 819433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 13809209 - 13809128
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||| || |||| ||||| |||||||| || |||||||||||    
T  13809209 ttaatgggcctaaccctaaagcttagtggacttaacccactccaattcgattctaaaatgtttctacattc-taacggtaaaa 13809128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 10644827 - 10644907
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  10644827 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 10644907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 14499831 - 14499729
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctc 394  Q
    ||||||||| |||||| |||||| ||| ||||||| | |||||||||| ||||||||||| ||||||||  |||||||||  ||||||||  |||||| |    
T  14499831 gtaaaatataaccaacagtcact-aaacggtaaaa-attaattactacactagtaacttagtaaaataatggttctcactaaccactaaaaataattcac 14499734  T
Q  395 accaa 399  Q
    |||||    
T  14499733 accaa 14499729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 18169585 - 18169665
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  18169585 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 18169665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 19697006 - 19696936
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| ||||||||||| ||||| ||||||| |||||| ||||| ||||||||||| ||||||||    
T  19697006 aacggtaaaatataaccaacggtca-ttaaacggtaaaa-actaatcactacactagtaacttagtaaaataa 19696936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 19707591 - 19707521
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| ||||||||||| ||||| ||||||| |||||| ||||| ||||||||||| ||||||||    
T  19707591 aacggtaaaatataaccaacggtca-ttaaacggtaaaa-actaatcactacactagtaacttagtaaaataa 19707521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 9795839 - 9795920
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||| ||||| ||||| ||||| ||||||||  |||||||||    
T  9795839 aacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactacactagtcacttagtaaaataagggttctcact 9795920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 15293997 - 15293915
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  15293997 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 15293915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 18248813 - 18248893
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  18248813 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcac 18248893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 18493717 - 18493652
Alignment:
Q  308 aacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||  |||| ||||||||||||||| ||||||||||| ||||||||| || ||||||    
T  18493717 aacggtcacttaac-ggtagaatactaattactactctagtaacttagtaaaataacggtcctcact 18493652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 319
Target Start/End: Complemental strand, 41256064 - 41255966
Alignment:
Q  222 tgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    |||||||||| ||||  |||||||||  ||||||||||| | | |||||| ||||| ||||||||| | |||||||||||||  | |||||||||||||    
T  41256064 tgggcttaaccctaatgccttagtgggcttaacccactcaatcacaattctaaaatgtttctacacacttaacggtaaaatactaacaacggtcactta 41255966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 5682135 - 5682028
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| ||||    
T  5682135 taacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaattt-tactctagtaacttaatgaaataactattctcactaatcactaaaagtaa 5682038  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  5682037 ttctcaccaa 5682028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 16732723 - 16732800
Alignment:
Q  221 atgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaa 298  Q
    |||||| |||||||||| |||| ||||||||||||| | |||||||| || ||||| |||||| || || ||||||||    
T  16732723 atgggcctaactctaaagcttaatggatttaacccatttcaactcaaatctaaaatgtttctatacacacaacggtaa 16732800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 22351707 - 22351626
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  22351707 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcac 22351626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 27954655 - 27954724
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  27954655 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 27954724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 7131705 - 7131625
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||| |  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  7131705 aacggtaaaatataaccaacggtcatt--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 7131625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 8378781 - 8378861
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  8378781 aacggtaaattataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 8378861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 30458534 - 30458632
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| |||||||||||||||||| ||||||||| |||| ||||||||  |||||  ||| ||||||||||| ||||| |||  ||||||||  |||||||    
T  30458534 cactaataacggtaaaatatcactaacggtcac-taaacggtaaaatcttaatt-ttactctagtaacttagtaaaacaactattctcactaaccactaa 30458631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 37477773 - 37477853
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||| |  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  37477773 aacggtaaaatataaccaacggtcatt--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 37477853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 40885162 - 40885079
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| ||  ||||| || |||||||  |||||||||||||||||||| |||||||||||  |||||||  |||||||||    
T  40885162 taacggtaaactactaccaatgggcacttaac-ggtaaaatactaattactactctagtaacttagcaaaataattgttctcact 40885079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 25118803 - 25118696
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  25118803 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 25118707  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  25118706 attcccaccaa 25118696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 15286888 - 15286806
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||| |||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  15286888 ataatggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 15286806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 15679947 - 15679905
Alignment:
Q  318 taaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||    
T  15679947 taaatggtaaaatactaattactacactaataacttagtaaaa 15679905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 20813149 - 20813041
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||  |||||  ||| ||||||||||| ||||| |||  |||| |||  |||||||| |||    
T  20813149 ataacggtaaaatatcacaaacagtcac-taaacggtaaaatcttaatt-ttactctagtaacttagtaaaacaactattcttactaaccactaaaagta 20813052  T
Q  389 attctcaccaa 399  Q
    | |||||||||    
T  20813051 actctcaccaa 20813041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 27961518 - 27961600
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||| | |||| ||||| ||||||||| |||||||||||||||| || || ||||| ||| |||| ||  ||||||||||    
T  27961518 ttaatggccctaaccctaaagcttagtggacttaacccactccaacttaaatctaaaatgtttatacattctaaacggtaaaa 27961600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 38765288 - 38765358
Alignment:
Q  249 ttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||||||| | | |||||| ||||| ||||||||| | |||||||||||||  | |||||||||||||    
T  38765288 ttaacccactcaatcacaattctaaaatgtttctacacacttaacggtaaaatactaacaacggtcactta 38765358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 54117888 - 54117780
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||| |||||||||  ||||||||   ||||||| |||    
T  54117888 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaattt-tactctagtaacttagtaaaataactattctcactaatcactaaaagta 54117791  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  54117790 attcccaccaa 54117780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 23269534 - 23269427
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||||||||||||||| ||||||||| |||| ||||||||  |||||  ||| || |||||||| ||||| ||  |||| ||||   ||||||| ||||    
T  23269534 taacggtaaaatatcactaacggtcac-taaacggtaaaatcttaatt-ttactctcgtaacttagtaaaacaatggttcccactaatcactaaaagtaa 23269437  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  23269436 ttctcaccaa 23269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 34395906 - 34396013
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| ||||||| ||||||| ||| ||||||||  || ||  ||| ||||||||||| |||||||||  ||||||||   ||||||| ||||    
T  34395906 taacggtaaaatgtcaccaatggtcact-aaacggtaaaatcttagttt-tactctagtaacttagtaaaataactattctcactactcactaaaagtaa 34396003  T
Q  390 ttctcaccaa 399  Q
    ||| ||||||    
T  34396004 ttcccaccaa 34396013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 47534649 - 47534569
Alignment:
Q  318 taaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    |||| |||||||||||||| ||||| |||||||||||  |||||||  |||||||||   |||||||  |||||||||||||    
T  47534649 taaacggtaaaatactaatgactacactagtaacttagcaaaataatggttctcactaaacactaaa-ataattctcaccaa 47534569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 14996750 - 14996830
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| || || ||||||||||| ||||||||  |||||||||    
T  14996750 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcaccacactagtaacttagtaaaataagggttctcact 14996830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 16523452 - 16523522
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||| || |||||| |||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||    
T  16523452 aacggtaaaacataaccaacagtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataa 16523522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 41063630 - 41063550
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |  ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  41063630 aacggtaaaatataatgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 41063550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 181 - 399
Target Start/End: Complemental strand, 21222344 - 21222126
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaacc-ttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||||||||||| |||  ||||||||   ||||| | ||||||||||||| ||||||| ||| |||| |||||||||||||||||||||| ||||| ||    
T  21222344 attttctcttaaggcaagtcttatatagattattcctctaatgggcttaaccctaaacccttaatggacttaacccactccaactcaattctaaaatgtt 21222245  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgcca 379  Q
    ||||| ||| |||||||||||||  | |||||||||||| || ||||||||||||||||| || ||||||||||| ||||||||  |||||||||   ||    
T  21222244 tctactctcttaacggtaaaatactaacaacggtcactt-aacggtaaaatactaattaccacactagtaacttagtaaaataatggttctcactaaaca 21222146  T
Q  380 ctaaacgtaattctcaccaa 399  Q
    |||||  |||||||||||||    
T  21222145 ctaaaaataattctcaccaa 21222126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 188 - 302
Target Start/End: Original strand, 7728939 - 7729053
Alignment:
Q  188 cttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacact 287  Q
    |||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  7728939 cttaagacaacccttatatagtctattctcttaatgggcttaaccctaaagcttagtggacttaacccactccaactcaattccaaaatgtttctacact 7729038  T
Q  288 cataacggtaaaata 302  Q
    || |||| |||||||    
T  7729039 cacaacgataaaata 7729053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 28902704 - 28902822
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||| ||||| |||    
T  28902704 attttctcttaagacaacccttatatagtctattctcttaatgggcttaaccctaaaccttagtcgacttaacccactccaactcaattctaaaatgttt 28902803  T
Q  281 ctacactcataacggtaaa 299  Q
    ||||||||  |||||||||    
T  28902804 ctacactctaaacggtaaa 28902822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 28939099 - 28939217
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||| ||||| |||    
T  28939099 attttctcttaagacaacccttatatagtctattctcttaatgggcttaaccctaaaccttagtcgacttaacccactccaactcaattctaaaatgttt 28939198  T
Q  281 ctacactcataacggtaaa 299  Q
    ||||||||  |||||||||    
T  28939199 ctacactctaaacggtaaa 28939217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 3674375 - 3674496
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||  |||||||| |||||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||    
T  3674375 attttctcttaagacaattcttatatagtctattcccttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaattctaaaatgttt 3674474  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  3674475 ctacactcacaacggtaaaata 3674496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 23466946 - 23467063
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||||||||| |||||||||| |||||||||||  |||| |||    
T  23466946 attttctcttaagacaacccttatatagtctattctcttaatgggctt-accctaaaccttagtggacttaacccacttcaactcaattctcaaatgttt 23467044  T
Q  281 ctacactcataacggtaaa 299  Q
    |||||| |  |||||||||    
T  23467045 ctacacactcaacggtaaa 23467063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 7729069 - 7729142
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||| ||||||||    
T  7729069 taacggtaaaatatcaccaatggtcacttaaacggtaaaatactaattactactccagtaacttagtaaaataa 7729142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 352
Target Start/End: Complemental strand, 24225081 - 24224911
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||   ||||| | ||||||||||| | ||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  24225081 attttctcttaagacaaggcttatataagttattcctctaatgggcttacc-ctaatgccttagtggacttaacccactcaaacacaattctaaaatgtt 24224983  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaact 352  Q
    |  |||||| |||||||||||||  | |||||||||||| || |||||||||||||| || || |||||||||    
T  24224982 ttcacactcttaacggtaaaatactaacaacggtcactt-aacggtaaaatactaataaccacactagtaact 24224911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 363
Target Start/End: Original strand, 37983877 - 37984066
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||| ||  ||||||||   ||||| | ||||||||||||| ||||  |||||||||| ||||||||||| ||| ||| || ||||| ||    
T  37983877 attttctcttaagataaggcttatataggttattcctctaatgggcttaaccctaatgccttagtggacttaacccactcaaacacaactctaaaatgtt 37983976  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaat-------actaattactaccctagtaacttaataaaataa 363  Q
    ||||||||| ||||||||| |||  | |||||||||||| || ||||||||       |||||||||||| ||||||||||| ||||||||    
T  37983977 tctacactcttaacggtaagatactaacaacggtcactt-aacggtaaaatactaacaactaattactacactagtaacttagtaaaataa 37984066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 3674512 - 3674595
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||  |||||||||    
T  3674512 taacggtaaaatactaccaacggtcacttaac-ggtaaaatactaattactaccctagtaatttagtaaaataagggttctcact 3674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 363
Target Start/End: Original strand, 433009 - 433153
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||| |||||| ||||| || |||||||||||||||| || || ||||| ||||||||| || ||||||||| ||  |  ||||||| ||    
T  433009 ttaatgggcctaaccctaaactttagtcgacttaacccactccaacttaaatctaaaatgtttctacacacacaacggtaaagtactaataacggtcgct 433108  T
Q  318 taaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    | || |||||||||  ||||| |||||||||||||||  |||||||    
T  433109 t-aacggtaaaatatcaattattaccctagtaacttagcaaaataa 433153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 21296869 - 21296753
Alignment:
Q  219 taatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||| |||  ||||| |||| |||| |||||||||||||||||||||| ||||| |||||||||||  || ||||||| |  | ||||||||||||    
T  21296869 taatgggcctaatcctaaagcttaatggacttaacccactccaactcaattctaaaatgtttctacactctaaatggtaaaacactaacaacggtcactt 21296770  T
Q  319 aaatggtaaaatactaat 336  Q
     || ||||||||||||||    
T  21296769 -aacggtaaaatactaat 21296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 363
Target Start/End: Original strand, 23494469 - 23494612
Alignment:
Q  219 taatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||| |||| ||||| ||||||||| |||||||||||||| | ||||| ||||| ||| ||||| |  || |||||| ||  |  |||||||||||    
T  23494469 taatgggcctaaccctaaagcttagtggacttaacccactccaatttaattctaaaatgtttttacacactcaatggtaaattactaataacggtcactt 23494568  T
Q  319 aaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
     || |||||||||||||  ||||||||| ||||||| ||||||||    
T  23494569 -aacggtaaaatactaaccactaccctaataacttagtaaaataa 23494612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 32965338 - 32965255
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||  ||||||||||||||||  | ||||||| |||||||||||||||||||||| ||||||||  |||||||||    
T  32965338 taacggtaaaatactaccaacggtcacttaacag-taaaatattaattactaccctagtaacttagtaaaataatggttctcact 32965255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 5450575 - 5450453
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | |||||||| ||||  |||  |||||||||| ||||||||||| |||  ||||| ||||| ||    
T  5450575 attttctcttaagacaaagcttatataggctattcctctaatgggcctaaccttaatgccttagtggacttaacccactcaaacataattctaaaatgtt 5450476  T
Q  280 tctacactcataacggtaaaata 302  Q
    | ||||||| |||||||||||||    
T  5450475 tttacactcttaacggtaaaata 5450453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 23467082 - 23467154
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||||| |||||||||| |||  |||||||||||||||| |||||||||||||||  |||||||    
T  23467082 taacggtaaaatatcaacaacggtcacataac-ggtaaaatactaattattaccctagtaacttagcaaaataa 23467154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 28902845 - 28902924
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||  ||||||||||||||||  |||||| || |||||||||| ||||||||||| ||||||||| |||||||||    
T  28902845 ggtaaaatactaccaacggtcacttaac-ggtaaactattaattactactctagtaacttagtaaaataacggttctcact 28902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 28939240 - 28939319
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||  ||||||||||||||||  |||||| || |||||||||| ||||||||||| ||||||||| |||||||||    
T  28939240 ggtaaaatactaccaacggtcacttaac-ggtaaactattaattactactctagtaacttagtaaaataacggttctcact 28939319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 7529537 - 7529618
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||| |||||| ||| ||||||| |||||||||||| ||||||||||| ||||||||  |||||||||    
T  7529537 aacggtaaaatataaccaacagtcact-aaacggtaaaa-actaattactacactagtaacttagtaaaataatggttctcact 7529618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 374
Target Start/End: Original strand, 16596055 - 16596206
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||| | ||| ||||||||| |||||||| ||||||||||| | ||||| |||||| ||    ||||||||| ||  |  ||||||||||    
T  16596055 ttaatgggcctaaccccaaagcttagtggacttaacccattccaactcaatactaaaatgtttctatac----aacggtaaattactaataacggtcact 16596150  T
Q  318 taaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    | ||  ||||||||||||| | |||||||||||||||  |||||||  |||||||||    
T  16596151 t-aacagtaaaatactaatcattaccctagtaacttatcaaaataatggttctcact 16596206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 18777632 - 18777551
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  18777632 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 18777551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 372
Target Start/End: Original strand, 7425939 - 7426019
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctca 372  Q
    ||||||||||||||| | |||||||||||  || ||||||| |||||| ||||| ||||||||||| |||||||| ||||||||    
T  7425939 ataacggtaaaatataatcaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagagttctca 7426019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 17471227 - 17471147
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  17471227 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 17471147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 17910128 - 17910234
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||| ||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||   || ||||  ||||    
T  17910128 aacggtaaaatatgaccaacggttact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataat 17910225  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  17910226 tctcaccaa 17910234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 19500489 - 19500569
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  19500489 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 19500569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 22882722 - 22882642
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  22882722 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 22882642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 32965407 - 32965355
Alignment:
Q  249 ttaacccactccaactcaattccaaaatatttctacactcataacggtaaaat 301  Q
    ||||||||||||||||||| || ||||| |||||||||||| |||||||||||    
T  32965407 ttaacccactccaactcaaatctaaaatgtttctacactcacaacggtaaaat 32965355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 43443041 - 43442961
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  43443041 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 43442961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 16106279 - 16106360
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | ||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  16106279 aacggtaaaatataatcaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 16106360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 32965884 - 32965841
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgg 224  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  32965884 attttctcttaagacaacccttatatagtctattctcttaatgg 32965841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 27182195 - 27182087
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| |||||||| |||| |  ||| ||||||||||| |||||||||  ||||||||   ||||||| |||    
T  27182195 ataacggtaaaatgtcactaacggtcactaaaa-ggtaaaat-ctaaattttactctagtaacttagtaaaataactattctcactaatcactaaaagta 27182098  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  27182097 attcccaccaa 27182087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 34939903 - 34939970
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||    
T  34939903 ggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataa 34939970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 21646352 - 21646246
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    |||||||||||||||| ||||||||| |||| ||||||||  |||||  ||| ||||||||||| |||||||||  ||||||||   ||||||| ||| |    
T  21646352 aacggtaaaatatcactaacggtcac-taaacggtaaaatcttaatt-ttactctagtaacttagtaaaataactattctcactaatcactaaaagtatt 21646255  T
Q  391 tctcaccaa 399  Q
    || ||||||    
T  21646254 tcccaccaa 21646246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 23542911 - 23542991
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||||||||| ||| ||||||| ||||| ||  |||||||||    
T  23542911 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaattactacactaataacttagtaaaacaagggttctcact 23542991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 25005495 - 25005535
Alignment:
Q  322 tggtaaaatactaattactaccctagtaacttaataaaata 362  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  25005495 tggtaaaatactaattactacactagtaacttagtaaaata 25005535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 29918619 - 29918719
Alignment:
Q  220 aatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||||||| ||||  |||||||||  ||||||||| | | | |||||| ||||| ||||||||| | |||||||||||||  | ||||||||||||    
T  29918619 aatgggcttaaccctaatgccttagtgggcttaacccacccaatcacaattctaaaatgtttctacacacttaacggtaaaatactaacaacggtcactt 29918718  T
Q  319 a 319  Q
    |    
T  29918719 a 29918719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 6457116 - 6457254
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||   |||||||  |||||||   ||| |||||||| ||||  ||||||| |  ||||||||||| | | |||||| ||||| ||    
T  6457116 attttctcttaagacaaggtttatataggctattctca-aataggcttaaccctaatgccttagttggcttaacccactcaatcacaattctaaaatgtt 6457214  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||| | |||||||||||||  | |||||||||||||    
T  6457215 tctacacacttaacggtaaaatactaacaacggtcactta 6457254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 22366123 - 22366044
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| |||||||||||  |||||||  ||||||||    
T  22366123 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagaaaaataagggttctcac 22366044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 23515177 - 23515258
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| || ||||||||| ||| ||||||||||| || ||| ||||| ||||||||||| ||||||||  |||||||||    
T  23515177 aacggtaaaacataaccaacggtaact-aaatggtaaaa-accaatcactacactagtaacttagtaaaataagggttctcact 23515258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 21397735 - 21397844
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||| |||| |||||| |||| |||||||   ||| || ||| ||||||||||| ||||| | | |||||||||   ||| ||| |||    
T  21397735 ataacggtaaaatatcgccaatggtcac-taaacggtaaaaccttaaatattactctagtaacttagtaaaacatcggttctcactactcaccaaaagta 21397833  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  21397834 attctcaccaa 21397844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 4199628 - 4199548
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||| | ||||||| |  |||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  4199628 aacggtaaaatataaccgatggtcactga--tggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 4199548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 9729997 - 9729917
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||| |||  || | ||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  9729997 aacggtaaaatataaccaacggttact--aacgctaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 9729917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 11336783 - 11336676
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    |||||||||||   |||||| |||||||||  |||||||   |||||| ||| | ||||||||| ||||| ||| |||||||||   ||||||| |||||    
T  11336783 aacggtaaaatcctaccaacagtcacttaac-ggtaaaaccttaattattactcaagtaacttagtaaaacaacggttctcactaatcactaaaagtaat 11336685  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  11336684 tctcaccaa 11336676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 33464 - 33343
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||| |||||||| |||||| | |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| |||    
T  33464 attttctcttaagacaactcttatatagtctattatcttaatgggcttaaccctaatccttagtggacttaacccactccaactcaattccaaaatgttt 33365  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  33364 ctacactcacaacggtaaaata 33343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 33327 - 33253
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataac 364  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||    
T  33327 taacggtaaaatatcaccaacggtcactaaaacggtaaaatactaattactactctagtaacttagtaaaataac 33253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 39446502 - 39446381
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||| |||||||| |||||| | |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| |||    
T  39446502 attttctcttaagacaactcttatatagtctattatcttaatgggcttaaccctaatccttagtggacttaacccactccaactcaattccaaaatgttt 39446403  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  39446402 ctacactcacaacggtaaaata 39446381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 17285719 - 17285840
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||| |||||||||||  |||||||| |||||| |  ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||    
T  17285719 attttatcttaagacaagtcttatatagtctattttcctaatgggcttaaccctaaaccttagtggacttaacccactccaactcaattctaaaatgttt 17285818  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  17285819 ctacactcacaacggtaaaata 17285840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 21191340 - 21191219
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||  |||||||| | |||||  |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||    
T  21191340 attttctcttaagacaattcttatatagtttattcccttaatgggcttaaccctaaaccttagtggacttaacccactccaacttaattccaaaatgttt 21191241  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||| | ||||||||||||    
T  21191240 ctacacttacaacggtaaaata 21191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 21197886 - 21197765
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||| ||||||  |||||||| |||| ||  |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||    
T  21197886 attttctcttcagacaattcttatatagtctactcccttaatgggcttaaccctaaaccttagtggacttaacccactccaacttaattccaaaatgttt 21197787  T
Q  281 ctacactcataacggtaaaata 302  Q
    | ||||| | ||||||||||||    
T  21197786 ccacacttacaacggtaaaata 21197765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 15933810 - 15933964
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||| |||||||| ||| ||||||||  ||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  15933810 attttctcttaagacaaggcttatatatgctattcttctaacgggcttaaacctaatgccttagtggacttaacccactcaaacacaattctaaaatgtt 15933909  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaa 335  Q
    ||||||||| |||||||||||||  | |||||||||| | || |||||||||||||    
T  15933910 tctacactcttaacggtaaaatactaacaacggtcacgt-aacggtaaaatactaa 15933964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 23837713 - 23837852
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||| ||  |||||||| || ||||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||||   |||| |||    
T  23837713 attttctcttaagataagtcttatatagtccattctcttaatgggcttaaccctaaaccttagaggacttaacccactccaactcaattttgaaatgttt 23837812  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||||| || ||| ||||||||| |  |||| ||||||||    
T  23837813 ctacacccacaacagtaaaatattattaacgatcacttaa 23837852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 360
Target Start/End: Original strand, 26012004 - 26012182
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaacctt-agtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||  |||| |||| |||||| | ||||||||||||| ||||  ||| |||||| ||||||||||| ||| |||||| ||||| |||    
T  26012004 ttttctcttaagacaaggcttaaatatgctattcctctaatgggcttaaccctaattctttagtggacttaacccactcaaacacaattctaaaatgttt 26012103  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    ||||| || | |||||||||||  | |||||||||||| || |||||||||||||| || || ||| ||||||| |||||    
T  26012104 ctacattctttacggtaaaatactaacaacggtcactt-aacggtaaaatactaataaccacactaataacttagtaaaa 26012182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 39446365 - 39446291
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataac 364  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||    
T  39446365 taacggtaaaatatcaccaacggtcactaaaacggtaaaatactaattactactctagtaacttagtaaaataac 39446291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 38534163 - 38534267
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||| ||||| ||||||||||||| |||||||| |||||||||||||| || |||||||||||| |||| |||||| |||||||||| ||||| |||    
T  38534163 attttcttttaaggcaacccttatatagtctattctcttaatgggcttaaccct-aaccttagtggacttaatccactcaaactcaattctaaaatgttt 38534261  T
Q  281 ctacac 286  Q
    ||||||    
T  38534262 ctacac 38534267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 399
Target Start/End: Original strand, 5855125 - 5855342
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||| |||  |||||| | ||||| ||||||| ||||  |||||||||| ||||||||||| ||| |||||  ||||| ||    
T  5855125 attttctcttaagacaaggcttaaataggctattcctctaatgagcttaac-ctaattccttagtggacttaacccactcaaacacaattataaaatgtt 5855223  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgcca 379  Q
    ||||||||| |||||||||||||  | ||||||| |||| || |||||||||||||| |  || || |||||||| ||||||||  |||||||||   ||    
T  5855224 tctacactcttaacggtaaaatactaacaacggttactt-aacggtaaaatactaataagcacactggtaacttagtaaaataatggttctcactaaaca 5855322  T
Q  380 ctaaacgtaattctcaccaa 399  Q
    ||||   |||||||||||||    
T  5855323 ctaagaataattctcaccaa 5855342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 399
Target Start/End: Complemental strand, 22735567 - 22735379
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||| ||||| ||||||||| ||||||||||||||||||| |  ||||| |||||||||||  |||||||||| |  | |||||||||||    
T  22735567 ttaatgggcctaaccctaaagcttagtggacttaacccactccaactcaaatataaaatgtttctacactctaaacggtaaaacactaacaacggtcact 22735468  T
Q  318 taaatggtaaaat-------actaattactaccctagtaactta-ataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    | || ||||||||       |||||| |||||  ||||||||||   |||||||| |||||||||  |||||||| ||||||||||||||    
T  22735467 t-aacggtaaaattctaataactaatcactacgatagtaacttagcaaaaataacggttctcactaaccactaaaagtaattctcaccaa 22735379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 23837850 - 23837958
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||| | ||||||||||||||  |||||||||||||||||||| ||||||||||| ||| ||||  |||||||||   |||||||  |||    
T  23837850 taacggtaaaatattaacaacggtcacttaac-ggtaaaatactaattactacactagtaacttagtaagataatggttctcactaaacactaaaaataa 23837948  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  23837949 ttctcaccaa 23837958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 17285857 - 17285964
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||  | |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||  |||||||||   | |||||  ||||    
T  17285857 aacggtaaaatactagcaacggtcacttaa-tggtaaaatactaattattaccctagtaacttagtaaaataatggttctcactaaacgctaaaaataat 17285955  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  17285956 tctcaccaa 17285964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 33528938 - 33529092
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||||| || ||||||  ||||||||  |||||| | ||||| || |||| ||||  |||||||||||||||||||||| ||| |||||| ||||| ||    
T  33528938 attttcttttgagacaaggcttatataggctattcctctaatgagcctaaccctaatgccttagtggatttaacccactcaaacacaattctaaaatgtt 33529037  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaa 335  Q
    ||||||||| |||||||||||||  |  |||| |||||| || |||||||||||||    
T  33529038 tctacactcttaacggtaaaatactaataacgatcactt-aacggtaaaatactaa 33529092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 38534299 - 38534407
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||| ||||||||  |||||| |||||||||  |||||||||||||| ||||| ||||||||||| ||||||||| |||||||||   |||||||  |||    
T  38534299 taacagtaaaatactaccaactgtcacttaac-ggtaaaatactaatcactactctagtaacttagtaaaataacggttctcactaaacactaaaaataa 38534397  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  38534398 ttctcaccaa 38534407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 33610788 - 33610666
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaac-tctaaaccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||| |||||| | |||||||| |||| || |  |||||||||||||||||||||| ||| || ||| ||||| ||    
T  33610788 attttctcttaagacaaggcttatatatgctattcctctaatgggcctaacctcaatgccttagtggatttaacccactcaaacacagttctaaaatgtt 33610689  T
Q  280 tctacactcataacggtaaaata 302  Q
    ||||| | |  ||||||||||||    
T  33610688 tctactcactcaacggtaaaata 33610666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 29306988 - 29307049
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  29306988 ccttagtggacttaacccactccaactcaattctaaaatatttctacacactcaacggtaaa 29307049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 341
Target Start/End: Original strand, 25296713 - 25296830
Alignment:
Q  222 tgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaa 321  Q
    ||||| |||| ||||  ||||||||| |||||||| ||||| ||||||| ||||| |||||||||||  |||||||||| | || |||||||||||| ||    
T  25296713 tgggcctaaccctaaggcttagtggacttaacccaatccaattcaattctaaaatgtttctacactctaaacggtaaaaca-caacaacggtcactt-aa 25296810  T
Q  322 tggtaaaatactaattacta 341  Q
    | ||||||| ||||| ||||    
T  25296811 tagtaaaattctaataacta 25296830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 22148061 - 22148141
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  22148061 aacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactacactagtaacttactaaaataagggttctcac 22148141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 283
Target Start/End: Original strand, 23350661 - 23350763
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||  ||||||||  |||||| | ||||||||| ||| |||| ||||||||||| |||| |||||| ||| |||||| ||||| |||    
T  23350661 ttttctcttaagacaaggcttatataggctattcctctaatgggctcaaccctaataccttagtggacttaatccactcaaacacaattctaaaatgttt 23350760  T
Q  281 cta 283  Q
    |||    
T  23350761 cta 23350763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 25758750 - 25758831
Alignment:
Q  239 cttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaa 321  Q
    ||||||||| |||||||| ||||| ||||||| ||||| |||||||||||  |||||||||| | || |||||||||||||||    
T  25758750 cttagtggacttaacccaatccaattcaattctaaaatgtttctacactctaaacggtaaaaca-caacaacggtcacttaaa 25758831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 21259214 - 21259133
Alignment:
Q  219 taatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    |||||||| |||| ||||| ||||||||| |||||||| ||||| | ||||| ||||| |||||||||||  ||||||||||    
T  21259214 taatgggcctaaccctaaagcttagtggacttaacccaatccaattaaattctaaaatgtttctacactctaaacggtaaaa 21259133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 18613019 - 18613125
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||| ||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||   || ||||  ||||    
T  18613019 aacggtaaaatataaccaacgatcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataat 18613116  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  18613117 tctcaccaa 18613125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 399
Target Start/End: Complemental strand, 21494075 - 21493973
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctc 394  Q
    ||||||||| ||||||||||| ||||| ||||||| |||||||| ||| ||||| ||||| ||||||||  |||||||||   |||||||  ||||||||    
T  21494075 gtaaaatataaccaacggtca-ttaaacggtaaaa-actaattagtacactagtgacttagtaaaataatggttctcactaaacactaaaaataattctc 21493978  T
Q  395 accaa 399  Q
    |||||    
T  21493977 accaa 21493973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 22981818 - 22981886
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||||||| |||| ||||| |||| |||| ||||||||||||||||||| || ||||| |||||||||    
T  22981818 ttaatgggcctaaccctaaagcttaatggacttaacccactccaactcaaatctaaaatgtttctacac 22981886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 23151444 - 23151361
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||| |||||  | ||||| |||||||| ||||||||||||||||||||| | ||||||||| ||||||||  |||||||||    
T  23151444 taacggtgaaatactaacaacgatcacttaa-tggtaaaatactaattactacaccagtaacttagtaaaataatggttctcact 23151361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 29307068 - 29307151
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||| ||||| || ||||||||||||||  | ||||||||||||||| || ||||||||||| ||||||||  |||||||||    
T  29307068 taacggttaaataccaacaacggtcacttaacag-taaaatactaattaccacactagtaacttagtaaaataatggttctcact 29307151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 31193982 - 31193922
Alignment:
Q  260 caactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    ||||||||||||||||| |||||||||||  ||||||||||||  || |||||||||||||    
T  31193982 caactcaattccaaaatgtttctacactccaaacggtaaaatactactaacggtcacttaa 31193922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 2545570 - 2545650
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||||||||| ||||||||||| ||||| ||||||| |||||| | ||| ||||||||||| ||||||||  ||||||||    
T  2545570 aacggtaaaatataaccaacggtca-ttaaacggtaaaa-actaatcattacactagtaacttagtaaaataagggttctcac 2545650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 20653632 - 20653571
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaact 352  Q
    ||||| ||||||||||||||| |||||| ||| |||||||||||||||| ||| |||||||||    
T  20653632 taacgataaaatatcaccaacagtcact-aaacggtaaaatactaattattactctagtaact 20653571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 16193484 - 16193379
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| ||||||||| |||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| ||     
T  16193484 ataacggtaaaatatcactaacggtcac-taaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtt 16193388  T
Q  389 attctcacc 397  Q
    |||||||||    
T  16193387 attctcacc 16193379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 24385381 - 24385276
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| || ||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  24385381 ataacggtaaaatatcactaatggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 24385285  T
Q  389 attctcacc 397  Q
    |||||||||    
T  24385284 attctcacc 24385276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 3430899 - 3430819
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || | ||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  3430899 aacggtaaaatataaccaacggtcact--aacgctaaaa-actaatcactacactagtaacttagtaaaataaaggttctcact 3430819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 15318795 - 15318715
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  15318795 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 15318715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 15499164 - 15499084
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  15499164 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 15499084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 354
Target Start/End: Complemental strand, 21197749 - 21197686
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaactta 354  Q
    |||||||||||||  | |||||||||||||   |||||||||||||||||||| |||||||||||    
T  21197749 taacggtaaaatactagcaacggtcacttatc-ggtaaaatactaattactacactagtaactta 21197686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 22088430 - 22088350
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  22088430 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 22088350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 24549588 - 24549668
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  24549588 aacggtaaaatataatcaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 24549668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 13661898 - 13661821
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||||||||||||| ||| ||||||| | |||| ||||| ||||||||||| ||||||||  |||||||||    
T  13661898 gtaaaatataaccaacggtcact-aaacggtaaaa-attaatcactacactagtaacttagtaaaataagggttctcact 13661821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 13720561 - 13720484
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||||||||||||| ||| ||||||| | |||| ||||| ||||||||||| ||||||||  |||||||||    
T  13720561 gtaaaatataaccaacggtcact-aaacggtaaaa-attaatcactacactagtaacttagtaaaataagggttctcact 13720484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 29760587 - 29760694
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  29760587 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 29760683  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  29760684 attcccaccaa 29760694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 22906867 - 22906785
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| || || ||||||||||| ||||||||  |||||||||    
T  22906867 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcaccacactagtaacttagtaaaataagggttctcact 22906785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 22981921 - 22982002
Alignment:
Q  293 cggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaata-aaataacagttctcact 374  Q
    ||||||||||||| |||||||||| | || ||||||| ||||||||| || |||||||||||  | ||||||| |||||||||    
T  22981921 cggtaaaatatcaacaacggtcacgt-aacggtaaaacactaattaccactctagtaacttagcagaaataacggttctcact 22982002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 39115911 - 39116019
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||| ||||||| |||| |||||||||| ||| ||||||||  |||||  ||| ||||||||||| |||||||||  |||| |||  |||||||| |||    
T  39115911 ataacagtaaaatgtcactaacggtcact-aaacggtaaaatcttaattt-tactctagtaacttagtaaaataactattcttactaaccactaaaagta 39116008  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  39116009 attcccaccaa 39116019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 374
Target Start/End: Complemental strand, 24105836 - 24105769
Alignment:
Q  305 accaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  24105836 accaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 24105769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 6999923 - 6999816
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||| ||||||||| |||| ||||||||  |||||  ||| ||||||||||| | ||| |||  ||||||||   ||||||| ||||    
T  6999923 taacggtaaaatgtcactaacggtcac-taaacggtaaaatcttaatttttactctagtaacttagtgaaacaactattctcactaaacactaaaagtaa 6999825  T
Q  390 ttctcacca 398  Q
     ||||||||    
T  6999824 ctctcacca 6999816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 17142669 - 17142589
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||  ||||||| ||||||||  |||||||||    
T  17142669 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactgataacttagtaaaataagggttctcact 17142589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 23151565 - 23151489
Alignment:
Q  186 ctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaa 262  Q
    ||||||||||||  ||||||||  ||| || | ||||||||||||||  | ||||||||||| ||||||||| ||||    
T  23151565 ctcttaagacaaggcttatataggctagtcctctaatgggcttaacttaataccttagtggacttaacccacgccaa 23151489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 30121330 - 30121410
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||| || | ||||| |||||||  || ||||||| |||||||||||| ||||||||||| ||||||||  |||||||||    
T  30121330 aacggtaacatctaaccaaaggtcact--aacggtaaaa-actaattactacactagtaacttagtaaaataagggttctcact 30121410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 181 - 399
Target Start/End: Original strand, 53847 - 54065
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||   |||||||  |||||||  ||||| ||||||| |||| |||||||||| ||||| |||||||||||||||| ||||| |||    
T  53847 attttctcttaagacaaggtttatataggctattctcctaatgagcttaaccctaatccttagtggacttaactcactccaactcaattctaaaatgttt 53946  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaat-aaaataacagttctcactcgcca 379  Q
    |||||||| |||| || |||||  | |||||||||||| || |||||||||||||||||||| ||||||||||| | |||||||  |||||||||   ||    
T  53947 ctacactcttaactgtgaaatactaacaacggtcactt-aacggtaaaatactaattactacactagtaacttagtaaaaataatggttctcactaaaca 54045  T
Q  380 ctaaacgtaattctcaccaa 399  Q
    |||||  |||||||||||||    
T  54046 ctaaaaataattctcaccaa 54065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 334
Target Start/End: Original strand, 80050 - 80202
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||| |||| ||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| |||    
T  80050 attttctcttaagataaccattatatagtctattctgttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaaatctaaaatgttt 80149  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatacta 334  Q
    ||||||||| |||||||||||   |  ||||||||||| ||||||||| |||||    
T  80150 ctacactcacaacggtaaaatgctattaacggtcactt-aatggtaaagtacta 80202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 363
Target Start/End: Original strand, 35991 - 36173
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||||||  | ||||||  ||||| ||||||| ||||| |||||||||| ||||| ||||||||| |||||| ||||| ||    
T  35991 attttctcttaagacaagtcttatatggtatattctcctaatgagcttaaccctaaaaccttagtggacttaacacactccaacccaattctaaaatgtt 36090  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||| ||||||||||||  | |||||||||||| || |||||||||||||||||||| ||||||||||  ||||||||    
T  36091 tctacactcacaacggtaaaatactaacaacggtcactt-aacggtaaaatactaattactacactagtaacttggtaaaataa 36173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 29050 - 29171
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||||| |||| |||||||||| ||| ||||||| ||||| |||    
T  29050 attttctcttaagacaacccttatatagtatattctcttaatgggcttaaccctaaaccttaatggacttaacccacttcaaatcaattctaaaatgttt 29149  T
Q  281 ctacactcataacggtaaaata 302  Q
    ||||||||| ||||||||||||    
T  29150 ctacactcacaacggtaaaata 29171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 29204 - 29270
Alignment:
Q  307 caacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||  |||||||||    
T  29204 caacggtcacttaa-tggtaagatactaattactacactagtaacttagtaaaataatggttctcact 29270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 1272 - 1169
Alignment:
Q  183 tttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttct 282  Q
    |||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||| |||||    
T  1272 tttctcttaagacaactcttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccattccaactcaattctaaaatgtttct 1173  T
Q  283 acac 286  Q
    ||||    
T  1172 acac 1169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 1137 - 1065
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||||  |||||||||| |||  ||||||||| ||||||||||||||||||||||  |||||||    
T  1137 taacggtaaaatatcgacaacggtcacgtaac-ggtaaaatattaattactaccctagtaacttagcaaaataa 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 34295 - 34410
Alignment:
Q  283 acactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccacta 382  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||||| ||||||||| |||||||||   |||||    
T  34295 acactaataacggtaaaatatcaccaacggtcact-aaacggtaaaatactaattactaatctagtaacttagtaaaataacggttctcactaatcacta 34393  T
Q  383 aacgtaattctcaccaa 399  Q
    || ||||||||||||||    
T  34394 aaagtaattctcaccaa 34410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 34213 - 34281
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||||||| ||||||| || |||| ||||||||||||| | |||||||| || ||||| |||||||||    
T  34213 ttaatgggcctaactctcaaacttaatggatttaacccatttcaactcaaatctaaaatgtttctacac 34281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 69; Significance: 7e-31; HSPs: 6)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 93587 - 93467
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||| ||| ||||||||||||||| ||||||||||| | |||||||| ||||| |||    
T  93587 attttctcttaggacaacccttatatagtctattctcttaatgggctcaaccctaaaccttagtggacttaacccactctagctcaattctaaaatgttt 93488  T
Q  281 ctacactcataacggtaaaat 301  Q
    ||||||| | ||| |||||||    
T  93487 ctacacttacaacagtaaaat 93467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 93449 - 93366
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||  ||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  93449 taacggtaaaatactaccaacggtcacttaac-ggtaaaatactaattactactctagtaacttagtaaaataatggttctcact 93366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 104355 - 104234
Alignment:
Q  182 ttttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactcca-actcaattccaaaatatt 279  Q
    ||||||||||||||||  ||||||||  ||| ||   ||||||||||||| |||| ||||||||||| ||||||||||| | || |||||||||||| ||    
T  104355 ttttctcttaagacaagtcttatataggctagtccactaatgggcttaac-ctaataccttagtggacttaacccactcaacacacaattccaaaatgtt 104257  T
Q  280 tctacactcataacggtaaaata 302  Q
    |||||| ||  ||||||||||||    
T  104256 tctacattctcaacggtaaaata 104234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 12993 - 12912
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||| |||| ||||||| ||||||  |||| ||||||||||| ||||||||  |||||||||    
T  12993 aacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcgctacactagtaacttagtaaaataagggttctcact 12912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 107797 - 107717
Alignment:
Q  292 acggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| || |||||| |||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  107797 acggtaaaacataaccaacagtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 107717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 56212 - 56318
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||| |||||||| |||| ||||||||||  |||||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  56212 ataatggtaaaatgtcactaacggtcact--aatggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 56307  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  56308 attcccaccaa 56318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 286
Target Start/End: Original strand, 6188 - 6286
Alignment:
Q  188 cttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| |||||||||    
T  6188 cttaagataacccttatatagtctattctcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaaatctaaaatgtttctacac 6286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 6318 - 6390
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  6318 taacggtaaaatatcaacaacggtcacttaaa-ggtaaaatactaattactactctagtaacttagtaaaataa 6390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 70006 - 69861
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcact 317  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||  ||||||||| ||||| |||||||||||| |||| |||||||  |  |||||| |||    
T  70006 ttaatgggcctaaccctaaagcttagtggacttaacccactctcactcaattctaaaatgtttctacactcacaacgataaaatactattaacggttact 69907  T
Q  318 taaatggtaaaatactaattactaccctagtaacttaataaaataac 364  Q
    | || |||||||||||||||||||| ||||||||||| |||||||||    
T  69906 t-aacggtaaaatactaattactactctagtaacttagtaaaataac 69861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 181 - 361
Target Start/End: Original strand, 3038 - 3218
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | |||||||| |||| ||||  |||||||||| ||||||||||| ||| |||||| ||||||||    
T  3038 attttctcttaagacaaggcttatataggctattcctctaatgggcctaaccctaatgccttagtggacttaacccactcaaacacaattctaaaatatt 3137  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaat 361  Q
    |||| | || |||||||||||||  | ||||| |||| | || |||||||||| ||||||||| ||||||||||| ||||||    
T  3138 tctagattcttaacggtaaaatactaacaacgttcac-tcaacggtaaaatacgaattactacactagtaacttagtaaaat 3218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 181 - 334
Target Start/End: Original strand, 8521 - 8673
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||| | |||||||  ||||| || |||||||||||||| ||||||||||||||| |||||||||||||||  ||||| ||||| ||     
T  8521 attttctcttaagacatctcttatattgtctatcctcttaatgggcttaaccctaaaccttagtggacttaacccactccaacagaattctaaaatgtta 8620  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatacta 334  Q
    ||||||||| ||||| |||||   || ||||||||||| || ||||||||||||    
T  8621 ctacactcacaacggcaaaatgctactaacggtcactt-aacggtaaaatacta 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 181 - 334
Target Start/End: Original strand, 11387 - 11539
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||| | ||||||| |||||| || |||||||||||||| |||||||||||||||  ||| ||||||||||  ||||| ||||| ||     
T  11387 attttctcttaagacatctcttatattttctatcctcttaatgggcttaaccctaaaccttagtggacctaatccactccaacagaattctaaaatgtta 11486  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatacta 334  Q
    ||||||||| |||||||||||   || ||||||||||| || ||||||||||||    
T  11487 ctacactcacaacggtaaaatgctactaacggtcactt-aacggtaaaatacta 11539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 11524 - 11596
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||  |||||| |||||||||  | ||||||||||||||||||| || ||||||| ||||||||    
T  11524 taacggtaaaatactaccaactgtcacttaaccg-taaaatactaattactaccttattaacttagtaaaataa 11596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 364
Target Start/End: Complemental strand, 8579 - 8436
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||| |||| ||||| ||||||||| |||||||||||||| ||||||| ||||| |||||||||||  || |||||| ||  |  |||||||||||     
T  8579 aatgggcctaaccctaaagcttagtggacttaacccactccaattcaattctaaaatgtttctacactccaaatggtaaattactaataacggtcactt- 8481  T
Q  320 aatggtaaaatactaattactaccctagtaacttaataaaataac 364  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||    
T  8480 aatggtaaaatactaattactattctagtaacttagtaaaataac 8436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 364
Target Start/End: Complemental strand, 2074 - 1891
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||| || ||||| ||||| |||| |||||||| ||||||||||||| ||||| ||    
T  2074 attttctcttaagacaacccttatatagtctaatctcttaatgggcttcaccctaaacccttaatggacttaacccattccaactcaattctaaaatgtt 1975  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataac 364  Q
    |||||||||  |||||||||  |  |  |||||| | || || | |||||||  ||||||||| ||||||||||| |||||||||    
T  1974 tctacactctaaacggtaaatcactaataacggtta-tttaacgataaaatatcaattactactctagtaacttagtaaaataac 1891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 1082 - 925
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||| |||||||| || ||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| ||     
T  1082 attttctcttaagacaactcttatatagtcgattatcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaaatctaaaatgtta 983  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattact 340  Q
    ||||||| |  ||||||||||   |  || |||||||| || ||||||||||||||||||    
T  982 ctacact-aacacggtaaaatgctattaaaggtcactt-aacggtaaaatactaattact 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 9337 - 9180
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatattt 280  Q
    |||||||||||||||||| |||||||| || ||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| ||     
T  9337 attttctcttaagacaactcttatatagtcgattatcttaatgggcttaaccctaaaccttagtggacttaacccactccaactcaaatctaaaatgtta 9238  T
Q  281 ctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattact 340  Q
    ||||||| |  ||||||||||   |  || |||||||| || ||||||||||||||||||    
T  9237 ctacact-aacacggtaaaatgctattaaaggtcactt-aacggtaaaatactaattact 9180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 11616 - 11725
Alignment:
Q  190 taagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactca 289  Q
    |||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||| ||||| |||||||||||||||  ||||| ||||||||| |     
T  11616 taagacaacccttatatagtctaatctcttaatgggcttaaccctaaaccttagtggacttaacgcactccaactcaattttaaaatgtttctacacact 11715  T
Q  290 taacggtaaa 299  Q
     |||||||||    
T  11716 caacggtaaa 11725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 188 - 320
Target Start/End: Complemental strand, 22156 - 22024
Alignment:
Q  188 cttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacact 287  Q
    ||||||| |||||||||||| |||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||| |  ||||| |||||||||     
T  22156 cttaagataacccttatatagtctattctcttaatgggtttaaccctaaaccttagtggacttaacccactccaactcaaatttaaaatgtttctacaca 22057  T
Q  288 cataacggtaaaatatcaccaacggtcacttaa 320  Q
    |  ||||||||| ||  |  |||||||||||||    
T  22056 ctcaacggtaaattactaataacggtcacttaa 22024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 363
Target Start/End: Complemental strand, 22026 - 21954
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||||||||||| ||||||||||| ||||||||    
T  22026 taacggtaaaatatcaacaatggtcacttaac-ggtaaaatactaattactactctagtaacttagtaaaataa 21954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 618 - 755
Alignment:
Q  183 tttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttct 282  Q
    |||||||||||||||| |||||||| | |||||| |||||||||||||| |||||| || ||||| ||| |||| ||||||||||||| ||||| |||||    
T  618 tttctcttaagacaactcttatatagtttattctcttaatgggcttaaccctaaacatttgtggacttagcccattccaactcaattctaaaatgtttct 717  T
Q  283 acactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||| |  ||||||||| ||  |  |||||||||||||    
T  718 acacactcaacggtaaattactaataacggtcacttaa 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 753 - 836
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||||| ||| |||||| |||  ||||||||| ||||||||||||||||||||||  |||||||  |||||||||    
T  753 taacggtaaaatatcaacaagggtcacgtaac-ggtaaaatattaattactaccctagtaacttagcaaaataatggttctcact 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 320
Target Start/End: Original strand, 11174 - 11311
Alignment:
Q  183 tttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttct 282  Q
    |||||| |||||||||||||||||| |||| ||| |||||||||||||| |||||||||||||||  |||||||||||| || || || ||||| |||||    
T  11174 tttctcctaagacaacccttatatagtctactctcttaatgggcttaaccctaaaccttagtggacataacccactccagctaaactctaaaatgtttct 11273  T
Q  283 acactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||| |  ||||||||| ||  |  |||||||||||||    
T  11274 acacgctcaacggtaaattactaataacggtcacttaa 11311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 793 - 933
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||||||| ||||| ||  ||||||||||||| ||||| ||||||| || ||||||||||| |||| ||||| ||||| ||    
T  793 attttctcttaagacaagtcttatatagtctatcctcctaatgggcttaaccctaaaaccttagttgacttaacccactcaaactaaattctaaaatgtt 892  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||||| ||| ||||||||||||  |  |||||||||||||    
T  893 tctacagtcacaacggtaaaatactattaacggtcacttaa 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 931 - 1039
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||| |||||||  | ||||||||||||||  |||||||||||||||||||| ||| |||||||  ||||||   |||||||||   |||||||  |||    
T  931 taacgataaaatactagcaacggtcacttaac-ggtaaaatactaattactacactaataacttagcaaaatagtggttctcactaaacactaaaaataa 1029  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  1030 ttctcaccaa 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 7176 - 7316
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  |||||||| ||||| ||  ||||||||||||  ||||| ||||||| || ||||||||||| |||| |||||  |||| ||    
T  7176 attttctcttaagacaagtcttatatagtctatcctcctaatgggcttaaacctaaaaccttagttgacttaacccactcaaactaaattcttaaatgtt 7275  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaa 320  Q
    |||||||||||||||||||||||  |  |||||||||||||    
T  7276 tctacactcataacggtaaaatactattaacggtcacttaa 7316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 399
Target Start/End: Original strand, 7346 - 7422
Alignment:
Q  323 ggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctcaccaa 399  Q
    |||||||||||||||||||| ||| |||||||  ||||||   |||||||||   |||||||  |||||||||||||    
T  7346 ggtaaaatactaattactacactaataacttagcaaaatagtggttctcactaaacactaaaaataattctcaccaa 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 334
Target Start/End: Original strand, 31533 - 31686
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||| ||||| |||||  ||||||||   ||||| | ||||||||||||| ||||| |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  31533 attttatcttatgacaaggcttatataggttattcctctaatgggcttaaccctaaatccttagtggacttaacccactcaaacacaattctaaaatgtt 31632  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatacta 334  Q
    ||||||||| ||| |||||||||  | |||||||||||| || ||||||||||||    
T  31633 tctacactcttaatggtaaaatactaacaacggtcactt-aacggtaaaatacta 31686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 396
Target Start/End: Original strand, 31671 - 31776
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||  | |||||||||  |||  ||||||||||||||||| || ||||||||||| ||||||||  |||||||||   |||||||  |||    
T  31671 taacggtaaaatactatcaacggtcatataac-ggtaaaatactaattaccacactagtaacttagtaaaataatggttctcactaaacactaaaaataa 31769  T
Q  390 ttctcac 396  Q
    |||||||    
T  31770 ttctcac 31776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 302
Target Start/End: Original strand, 69971 - 70093
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | ||||||||||||| ||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  69971 attttctcttaagacaaggcttatataggctattcctctaatgggcttaaccctaattccttagtggacttaacccactcaaacacaattctaaaatgtt 70070  T
Q  280 tctacactcataacggtaaaata 302  Q
    ||||||||| ||||||| |||||    
T  70071 tctacactcttaacggtgaaata 70093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 360
Target Start/End: Complemental strand, 196985 - 196808
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||   |||||| | |||||||||||| ||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  196985 attttctcttaagacaaggcttatataggttattctct-aatgggcttaaccctaattccttagtggacttaacccactcaaacacaattctaaaatgtt 196887  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaa 360  Q
    ||||||||| |||||||||||||  | |||| |||| || || |||||||||||||| || || ||||||| ||| |||||    
T  196886 tctacactcttaacggtaaaatactaacaac-gtcagtt-aacggtaaaatactaataaccacactagtaatttagtaaaa 196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 12915 - 13021
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaactta-ataaaataacagttctcactcgccactaaacgt 387  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||   |||||||| |||||||||  ||||||||  |    
T  12915 ataacggtaaaatatcaccaacgaccact-aaatggtaaaatactaattactactctagtaacttagcaaaaataacggttctcactaaccactaaaaat 13013  T
Q  388 aattctca 395  Q
    ||||||||    
T  13014 aattctca 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 116291 - 116172
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaaacc-ttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||||||||||||   |||||| ||| ||| |||||| ||||||| ||| |||| ||||| || ||||||||||||| ||||| ||    
T  116291 attttctcttaagacaacccttatatagcatattctcttattggacttaaccctaaacctttaatggacttaactcattccaactcaattctaaaatgtt 116192  T
Q  280 tctacactcataacggtaaa 299  Q
    ||||||| | ||||||||||    
T  116191 tctacacacttaacggtaaa 116172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 116154 - 116046
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||||||||||  |||||||||||  |||||||  |||||||||   |||||||  |||    
T  116154 taacggtaaaatatcaacaatggtcacttaac-ggtaaaatactaattactaaactagtaacttagcaaaataatggttctcactaaacactaaaaataa 116056  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  116055 ttctcaccaa 116046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 165883 - 165778
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| |||| ||| ||||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  165883 ataacggtaaaatatcactaacgatca-ttaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 165787  T
Q  389 attctcacc 397  Q
    |||||||||    
T  165786 attctcacc 165778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 8184 - 8078
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||  |||||||||   ||||||   ||||    
T  8184 aacggtaaaatataaccaacggtcact-aaatggtaaaa-actaattactacactagtaacttagtaaaataatggttctcactaaacactaacaataat 8087  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  8086 tctcaccaa 8078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 11312 - 11418
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||  |||||||||   ||||||   ||||    
T  11312 aacggtaaaatataaccaacggtcact-aaatggtaaaa-actaattactacactagtaacttagtaaaataatggttctcactaaacactaacaataat 11409  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  11410 tctcaccaa 11418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 308 - 395
Target Start/End: Original strand, 152 - 238
Alignment:
Q  308 aacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattctca 395  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||| |||||||||   |||||||  |||||||||    
T  152 aacggtcacttaac-ggtaaaatactaattactaccctagtaacttagtaaaataacggttctcactaaacactaaaaataattctca 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 96933 - 96794
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | ||||||||||||||||||  |||||||||| ||||| || || ||| |||||  ||| | ||    
T  96933 attttctcttaagacaaggcttatataggctattcctctaatgggcttaactctaatgccttagtggacttaactcattcaaacacaattttaaattgtt 96834  T
Q  280 tctacactcataacggtaaaatatcaccaacggtcactta 319  Q
    ||||||||| |||||||||| ||  | |||||||||||||    
T  96833 tctacactcttaacggtaaattactaacaacggtcactta 96794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 31594 - 31675
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    ||||||||| |||||||||| |||| ||||||||||||| ||||||| ||||| ||||| ||||||||| || |||||||||    
T  31594 ttaatgggcctaactctaaagcttaatggatttaacccattccaacttaattctaaaatgtttctacacacacaacggtaaa 31675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 71261 - 71322
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaact 352  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||    
T  71261 taacggtaaaatatcaccaacggtcac-taaacggtaaaatactaattattactctagtaact 71322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 9633 - 9742
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||||| ||||||||||||| ||| |||||||   |||||| ||| ||||||||||| ||||| ||| |||||||||   ||||||| |||    
T  9633 ataacggtaaaatattaccaacggtcact-aaacggtaaaaccttaattattactctagtaacttagtaaaacaacggttctcactaatcactaaaagta 9731  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  9732 attctcaccaa 9742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 9535 - 9603
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||||||| ||||| |||| |||| ||||||||||||| | |||||||| || ||||| |||||||||    
T  9535 ttaatgggcctaactataaagcttaatggatttaacccatttcaactcaaatctaaaatgtttctacac 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 112146 - 112037
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||  |||||||||||| ||| |||||||   |||||| ||| ||||||||||| ||||| |||||||||||||   ||||||| |||    
T  112146 ataacggtaaaatatttccaacggtcact-aaacggtaaaaccttaattattactctagtaacttagtaaaacaacagttctcactaatcactaaaagta 112048  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  112047 attctcaccaa 112037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 102624 - 102509
Alignment:
Q  238 ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaatt 337  Q
    ||||| |||| |||||||||||||||| || || ||||| ||||||||| || ||||||||| ||  |  ||||||||||| || |||||||||||||||    
T  102624 ccttaatggacttaacccactccaacttaaatctaaaatgtttctacacacacaacggtaaattactaataacggtcactt-aacggtaaaatactaatt 102526  T
Q  338 actaccctagtaactta 354  Q
    | ||||| | |||||||    
T  102525 attaccccaataactta 102509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 4848 - 4771
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||| ||||  |||||||||    
T  4848 ggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaatataagggttctcact 4771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 110156 - 110217
Alignment:
Q  239 cttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||||| |||||||| || || ||||||| ||||| |||||||||||  ||||||||||    
T  110156 cttagtggacttaacccaatctaattcaattctaaaatgtttctacactctaaacggtaaaa 110217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 399
Target Start/End: Complemental strand, 34072 - 33969
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattct 393  Q
    |||||||||| ||||||||||||| ||| ||||||| |||||||||||| ||||||||||| ||||||||  |||||||||   |||||||  |||||||    
T  34072 ggtaaaatataaccaacggtcact-aaacggtaaaa-actaattactacactagtaacttagtaaaataatggttctcactaaacactaaaaataattct 33975  T
Q  394 caccaa 399  Q
    ||||||    
T  33974 caccaa 33969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 43556 - 43662
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| |||||||| ||||||||||   || ||||  ||||    
T  43556 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataatagttctcactaaacattaaaaataat 43653  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  43654 tctcaccaa 43662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 384
Target Start/End: Complemental strand, 9700 - 9614
Alignment:
Q  297 aaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaa 384  Q
    ||||||||||||||| ||||| ||| |||||| ||||||| ||||| ||||||||||| ||||||||||||| |||||  ||||||||    
T  9700 aaaatatcaccaacgatcact-aaacggtaaactactaatcactactctagtaacttagtaaaataacagttttcactaaccactaaa 9614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 374
Target Start/End: Complemental strand, 274 - 108
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggt-----------aaaatatcac 306  Q
    ||||||| | |||||||||| |||| | ||||||||||| ||||| |||| || ||||| |||||| || |||||||||           |||||| |||    
T  274 ttaatggacctaactctaaagcttaatagatttaacccattccaattcaaatctaaaatgtttctatacacataacggttacttaagggtaaaataccac 175  T
Q  307 caacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||| ||| ||| |||||||||||||| ||||| ||||||||||| ||||||||| ||| |||||    
T  174 caacggtaact-aaacggtaaaatactaatcactactctagtaacttagtaaaataacggttttcact 108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 11311 - 11201
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaatta-ctaccctagtaacttaataaaataacagttctcactcgccactaaacgt 387  Q
    ||||||||||||| |||||||||||||| |||| |||||||| |||||||  ||| ||||| ||||| ||||||||| ||| |||||   ||||||| ||    
T  11311 ataacggtaaaatgtcaccaacggtcac-taaacggtaaaatcctaattatttactctagtgacttagtaaaataacggttttcactaatcactaaaagt 11213  T
Q  388 aattctcaccaa 399  Q
    ||||||||||||    
T  11212 aattctcaccaa 11201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 22150 - 22047
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    |||||||||||||||||  ||||||||  |||||| | ||||||||||||| ||||  |||||||||| ||||||||||| ||| |||||| ||||| ||    
T  22150 attttctcttaagacaaggcttatataggctattcctctaatgggcttaaccctaatgccttagtggacttaacccactcaaacacaattctaaaatgtt 22051  T
Q  280 tcta 283  Q
    ||||    
T  22050 tcta 22047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 89573 - 89444
Alignment:
Q  210 ctattcttttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaa 309  Q
    |||||| | ||||| || |||| | ||| |||||| || |||||||||||||||||||||| ||||| |||||||||||  |||||||||| | |  |||    
T  89573 ctattcatctaatgagcctaacccaaaagcttagttgacttaacccactccaactcaattctaaaatgtttctacactccaaacggtaaaaca-ctacaa 89475  T
Q  310 cggtcacttaaatggtaaaatactaattacta 341  Q
    ||||||||| ||||||||||| ||||| ||||    
T  89474 cggtcactt-aatggtaaaattctaataacta 89444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 108357 - 108437
Alignment:
Q  292 acggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| || | ||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  108357 acggtaaaacataatcaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 108437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 302
Target Start/End: Complemental strand, 6758 - 6636
Alignment:
Q  181 attttctcttaagacaacccttatatattctattcttttaatgggcttaactctaa-accttagtggatttaacccactccaactcaattccaaaatatt 279  Q
    ||||| || ||||||||  ||||||||  |||||| | |||| ||| |||| |||| ||||||||||| ||||||||||| | | |||||| ||||| ||    
T  6758 attttgtcataagacaaggcttatataggctattcctctaataggcctaaccctaataccttagtggacttaacccactcaaccacaattctaaaatgtt 6659  T
Q  280 tctacactcataacggtaaaata 302  Q
    ||||||||| |||||||||||||    
T  6658 tctacactcttaacggtaaaata 6636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 8)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 12701 - 12809
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||||||||||   ||||||||||| ||||  ||||||||| |||||||||  ||||||||||| ||||||||| |||||||||   |||||||  |||    
T  12701 taacggtaaaattctaccaacggtcagttaac-ggtaaaatattaattactaatctagtaacttagtaaaataacggttctcactaaacactaaaaataa 12799  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  12800 ttctcaccaa 12809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 26079 - 26187
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||||||||||   ||||||||||||||||  ||||||||| |||||||||  || |||||||| ||||||||| |||||||||   |||||||  |||    
T  26079 taacggtaaaattctaccaacggtcacttaac-ggtaaaatattaattactaatctcgtaacttagtaaaataacggttctcactaaacactaaaaataa 26177  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  26178 ttctcaccaa 26187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 12611 - 12682
Alignment:
Q  228 taactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    |||| ||||| |||| ||||||||||||| ||||||||||||| ||||| ||||||||| || |||||||||    
T  12611 taaccctaaagcttaatggatttaacccattccaactcaattctaaaatgtttctacacacacaacggtaaa 12682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 16450 - 16529
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    ||||||| |||| ||||| |||| ||||||||| ||| ||||||||||||| ||||| ||||||||| || |||||||||    
T  16450 aatgggcctaaccctaaagcttaatggatttaatccattccaactcaattctaaaatgtttctacacacacaacggtaaa 16529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 25981 - 26060
Alignment:
Q  220 aatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaa 299  Q
    ||||||| |||| ||||| |||| ||||||||| ||| ||||||||||||| ||||| ||||||||| || |||||||||    
T  25981 aatgggcctaaccctaaagcttaatggatttaatccattccaactcaattctaaaatgtttctacacacacaacggtaaa 26060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 131852 - 131744
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| ||||| ||||||||| ||| ||||||||  |||||  ||| ||||||||||| ||||| ||| |||||||||   ||||||| |||    
T  131852 ataacggtaaaatgtcaccgacggtcact-aaacggtaaaatcttaattt-tactctagtaacttagtaaaacaacggttctcactaatcactaaaagta 131755  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  131754 attctcaccaa 131744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 16548 - 16656
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||||||||||   ||||||||||||||||  ||||||||| |||||||||  || |||||||| ||||||||  |||||||||   |||||||  |||    
T  16548 taacggtaaaattctaccaacggtcacttaac-ggtaaaatattaattactaatctcgtaacttagtaaaataaaggttctcactaaacactaaaaataa 16646  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  16647 ttctcaccaa 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 167952 - 167883
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  167952 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 167883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 85980 - 86088
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||| ||||||||||||||| |||||| ||| |||||||||||||| ||||| ||| ||||||| ||||||| | ||| |||||    |||||| ||||    
T  85980 taacgataaaatatcaccaacagtcact-aaacggtaaaatactaatcactactctaataacttagtaaaatagcggttttcactaattactaaaagtaa 86078  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  86079 ttctcaccaa 86088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 159849 - 159917
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacac 286  Q
    ||||||||| |||| ||||| |||| ||||||||||||| |||||||||| |  ||||| |||||||||    
T  159849 ttaatgggcctaaccctaaagcttaatggatttaacccattccaactcaaatttaaaatgtttctacac 159917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 159947 - 160030
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||| |  |||||||||||||||   ||||||||| |||||| ||| |||||||||||  |||||||| |||| ||||    
T  159947 taacggtaaaacactaccaacggtcacttatc-ggtaaaatattaattattactctagtaacttagcaaaataacggttcccact 160030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 5846 - 5952
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||   || ||||  ||||    
T  5846 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcactaaacattaaaaataat 5943  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  5944 tctcaccaa 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 43605 - 43685
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  |||||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  43605 aacggtaaaatataaccaacggtcact--aatggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 43685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 164620 - 164514
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||   || ||||  ||||    
T  164620 aacggtaaaatatgaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcactaaacaataaatataat 164523  T
Q  391 tctcaccaa 399  Q
    |||||||||    
T  164522 tctcaccaa 164514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 399
Target Start/End: Original strand, 61457 - 61561
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaatta-ctaccctagtaacttaataaaataacagttctcactcgccactaaacgtaattct 393  Q
    |||||||||||||||||||||  ||||||||||||| |||||||  ||| ||||||||||| |||||  || ||||||| |   |||||||  |||||||    
T  61457 gtaaaatatcaccaacggtca-ataaatggtaaaatcctaattatttactctagtaacttagtaaaaccacggttctcattaagcactaaaaataattct 61555  T
Q  394 caccaa 399  Q
    ||||||    
T  61556 caccaa 61561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 144 - 225
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||| ||||||||||||||||  |||||||||    
T  144 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactaataacttaataaaataagggttctcact 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 6822 - 6741
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  6822 aacggtaaaatatgaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 6741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 3008 - 3089
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||| ||||| ||| ||||||||||||||||  |||||||||    
T  3008 aacggtaaaatataaccaacggtcact-aaacggtaaaa-actaatcactacactaataacttaataaaataagggttctcact 3089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 26704 - 26637
Alignment:
Q  235 aaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaata 302  Q
    ||||||||||||| ||||||||||| ||  |||||| ||||| |||||||||||| ||||||||||||    
T  26704 aaaccttagtggacttaacccactcaaatacaattctaaaatgtttctacactcacaacggtaaaata 26637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 109066 - 108957
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||||||| |||||| ||| | |||||   |||||| ||| ||||||||||| ||||| ||| |||||||||   |||||||  ||    
T  109066 ataacggtaaaatatcaccaactgtcact-aaacgataaaaccttaattattactctagtaacttagtaaaaaaacggttctcactaatcactaaaatta 108968  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  108967 attctcaccaa 108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 117567 - 117458
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||||||| |||||| ||| | |||||   |||||| ||| ||||||||||| ||||| ||| |||||||||   |||||||  ||    
T  117567 ataacggtaaaatatcaccaactgtcact-aaacgataaaaccttaattattactctagtaacttagtaaaaaaacggttctcactaatcactaaaatta 117469  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  117468 attctcaccaa 117458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 34098 - 34028
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||| ||||| ||||||||||| ||||||||    
T  34098 aacggtaaaatataaccaacggtcac-taaacggtaaaa-actaatcactacactagtaacttattaaaataa 34028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 5835 - 5754
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||| ||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  5835 aacggtaaaatataaccaatggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 5754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 8351 - 8434
Alignment:
Q  217 tttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaa 300  Q
    ||||||| || |||| |||||  |||||||| | |||||||||||||| || || |||||||||||||||||  ||||||||||    
T  8351 tttaatgcgcctaaccctaaagattagtggactaaacccactccaacttaaatctaaaatatttctacactctaaacggtaaaa 8434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 1944 - 2058
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||  |||| |  ||| || |||||||| ||||| ||| |||| ||||   ||||||    
T  1944 cactaataacggtaaaatatcaccaacggtcac-taaacggtaaaaatctaaattttactcttgtaacttagtaaaacaacggttcccactaatcactaa 2042  T
Q  384 acgtaattctcaccaa 399  Q
    | | ||||||||||||    
T  2043 aagcaattctcaccaa 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 11258 - 11165
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaa 384  Q
    |||||||||||||||||||||||||||| ||||  |||||||  |||||  ||| ||||||||||| ||||| |||  ||||||||  ||||||||    
T  11258 ataacggtaaaatatcaccaacggtcac-taaacagtaaaatcttaatt-ttactctagtaacttagtaaaacaactattctcactaaccactaaa 11165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 5297 - 5184
Alignment:
Q  284 cactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaa 383  Q
    |||| ||||||||||||| |||  |||||||||| ||| ||||||||  |||||  ||| ||| ||||||| ||||| |||| ||||||||  |||||||    
T  5297 cactaataacggtaaaatgtcagtaacggtcact-aaacggtaaaatcttaattt-tactctaataacttagtaaaacaacaattctcactaaccactaa 5200  T
Q  384 acgtaattctcaccaa 399  Q
    | ||||||||||||||    
T  5199 aagtaattctcaccaa 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 7210 - 7292
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  7210 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 36564 - 36457
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| ||||||||| |||| ||||||||   ||||  ||| ||||||||||| |||||||||  ||||||||   ||||||| |||    
T  36564 ataacggtaaaatatcactaacggtcac-taaacggtaaaatctcaatt--tactctagtaacttagtaaaataactattctcactaaacactaaaagta 36468  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  36467 attcccaccaa 36457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 2607 - 2689
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  2607 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 2689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 7824 - 7905
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  7824 aacggtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 7905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 5203 - 5095
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||| ||||||||| ||||||||| ||| ||| ||||||| |||||||||||  ||||||||||| ||||||||  |||||||||   || ||||  ||    
T  5203 ataactgtaaaatataaccaacggttact-aaacggtaaaa-actaattactatactagtaacttagtaaaataatggttctcactaaacattaaaaata 5106  T
Q  389 attctcaccaa 399  Q
    |||||||||||    
T  5105 attctcaccaa 5095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 399
Target Start/End: Complemental strand, 4804 - 4696
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| ||||||||| |||| |||||||| || | |  ||| ||||||||||| |||||||||  ||||||||   ||||||| |||    
T  4804 ataacggtaaaatatcactaacggtcac-taaacggtaaaat-ctcaattttactctagtaacttagtaaaataactattctcactaatcactaaaagta 4707  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  4706 attcccaccaa 4696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 8996 - 8914
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  8996 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 8914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 15894 - 15812
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  15894 ataacggtaaaatgtaaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 15812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 374
Target Start/End: Original strand, 652 - 734
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | ||||||||||||| | |  |||||| |||||| ||||||||||||||||| ||||||||  |||||||||    
T  652 ataacggtaaaatgtaaccaacggtcactaaca--gtaaaa-actaatcactaccctagtaacttagtaaaataagggttctcact 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 3866 - 3936
Alignment:
Q  218 ttaatgggcttaactctaaaccttagtggatttaacccactccaactcaattccaaaatatttctacactc 288  Q
    ||||||||  |||| ||||| ||||||||| |||||||||||||||| || || ||||| |||||||||||    
T  3866 ttaatgggtctaaccctaaagcttagtggacttaacccactccaacttaaatctaaaatgtttctacactc 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 10388 - 10308
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||||| |||| |||||  |||||||||| ||||||||  |||||||||    
T  10388 aacggtaaaatataacgaacggtcact--aacggtaaaata-taatcactacaatagtaacttagtaaaataagtgttctcact 10308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 6448 - 6341
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    ||||||||||||||||| ||||||||| |||| ||||||||  |||||  ||| ||| || |||| ||||| ||| |||||||||  ||||||||  |||    
T  6448 taacggtaaaatatcactaacggtcac-taaacggtaaaatcttaatt-ttactctaataccttagtaaaacaacggttctcactaaccactaaaattaa 6351  T
Q  390 ttctcaccaa 399  Q
    ||||||||||    
T  6350 ttctcaccaa 6341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 65 - 134
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  65 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 6967 - 7065
Alignment:
Q  220 aatgggcttaactctaaa-ccttagtggatttaacccactccaactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcactt 318  Q
    |||||||||||||||||  |||||||||  ||||||||||| | | |||||| ||||| ||||||||||  |||||||||||||  | ||| ||||||||    
T  6967 aatgggcttaactctaatgccttagtgggcttaacccactcaatcacaattctaaaatgtttctacact--taacggtaaaatactagcaatggtcactt 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 3229 - 3124
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||| ||||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  3229 ataacggtaaaatgtcactaacggtca-ttaaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 3133  T
Q  389 attctcacc 397  Q
    |||||||||    
T  3132 attctcacc 3124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 22849 - 22918
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||| |||||| ||| |||||||  ||||| ||||||||||||||||| ||||||||    
T  22849 aacggtaaaatataaccaacagtcact-aaacggtaaaa--ctaatcactaccctagtaacttagtaaaataa 22918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 27618 - 27538
Alignment:
Q  293 cggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||| ||||  |||||||||| ||| |||||||||||||||||||| ||| ||||||| ||||| |||  ||||||||    
T  27618 cggtaaaacatcattaacggtcact-aaacggtaaaatactaattactacactaataacttagtaaaacaactattctcact 27538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 1153 - 1073
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||| | |||||||||||||  || ||||||||| |||| ||||| ||||||||||| ||||||||  |||||||||    
T  1153 aacggtaaaatctaaccaacggtcact--aacggtaaaata-taatcactacactagtaacttagtaaaataagggttctcact 1073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 9131 - 9053
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||| |||| |||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  9131 ggtaaaatataaccagcggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 9053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 4339 - 4419
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    |||||||||||||  ||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  4339 aacggtaaaatatagccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 4419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 16946 - 16866
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| || || ||||||||||| ||||||||  |||||||||    
T  16946 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcaccacactagtaacttagtaaaataagggttctcact 16866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 29806 - 29886
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||||||| | |  |||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  29806 aacggtaaaatataaccaacggtcactaaca--gtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 29886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 32280 - 32200
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  32280 aacggtaaaatataactaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 32200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 45648 - 45718
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||| ||||||| ||||||||||||| ||| ||||| | |||||||||||| ||||||||||| ||||||||    
T  45648 aacggcaaaatataaccaacggtcact-aaacggtaaca-actaattactacactagtaacttagtaaaataa 45718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 49478 - 49408
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||  ||||| ||||||||||| ||||||||    
T  49478 aacggtaaaatataaccaacggtcac-taaacggtaaaa-actaagcactacactagtaacttagtaaaataa 49408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 153646 - 153576
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| || |||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||    
T  153646 aacggtaaaatataacgaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataa 153576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 169549 - 169469
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| |||||||||||||  || ||||||| |||||| ||||| ||||||||| | ||||||||  |||||||||    
T  169549 aacggtaaaatataaccaacggtcact--aacggtaaaa-actaatcactacactagtaactcagtaaaataagggttctcact 169469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 36701 - 36770
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||| ||| |||||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  36701 aacggtaaattataaccaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 36770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 4027 - 4104
Alignment:
Q  295 gtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||| ||| ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  4027 gtaaattataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 3577 - 3658
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || |||||||||| ||| ||||||| |||||| ||||  ||||||||||| ||||||||  |||||||||    
T  3577 aacggtaaaatataactaacggtcact-aaacggtaaaa-actaatcactatactagtaacttagtaaaataagggttctcact 3658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 9495 - 9602
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||||||| |||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  9495 ataacggtaaaatgtcaccaacagtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaaacactaaaagta 9591  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  9592 attcccaccaa 9602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 373
Target Start/End: Complemental strand, 4078 - 4001
Alignment:
Q  294 ggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcac 373  Q
    ||||||| || ||||||||||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  ||||||||    
T  4078 ggtaaaacataaccaacggtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcac 4001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 5493 - 5391
Alignment:
Q  292 acggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaatt 391  Q
    ||||||||||||||||||||||||| |||| ||||||||   ||||  ||| |||||| |||||| |||||||  ||||||||   |||||||  |||||    
T  5493 acggtaaaatatcaccaacggtcac-taaacggtaaaatctcaatt--tactctagtagcttaatgaaataactattctcactaaacactaaaattaatt 5397  T
Q  392 ctcacc 397  Q
    ||||||    
T  5396 ctcacc 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 374
Target Start/End: Complemental strand, 9713 - 9631
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| | | |||||||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  9713 ataacggtaaaatgtaatcaacggtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 9631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 602 - 522
Alignment:
Q  292 acggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||| || |||||| |||||| ||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  602 acggtaaaacataaccaacagtcact-aaacggtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 5340 - 5440
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  5340 ataacggtaaaatgtcactaacggtcac-taaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 5436  T
Q  389 attc 392  Q
    ||||    
T  5437 attc 5440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 17647 - 17727
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  || ||||||| |||||| ||||| |||| |||||| ||||||||  |||||||||    
T  17647 aacggtaaaatataacgaacggtcact--aacggtaaaa-actaatcactacactagaaacttagtaaaataagggttctcact 17727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 399
Target Start/End: Original strand, 46813 - 46922
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattact-accctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||| |||| |||||||||| ||| |||||||   |||||| | || ||||||||||| ||||| ||| |||||||||   ||||||| |||    
T  46813 taacggtaaaatgtcactaacggtcact-aaacggtaaaaccttaattatttactctagtaacttagtaaaacaacggttctcactaatcactaaaagta 46911  T
Q  389 attctcaccaa 399  Q
    |||| ||||||    
T  46912 attcccaccaa 46922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 23336 - 23444
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    |||||||||||||||||| || |||||| |||| ||||||||  |||||  ||| ||||||||||| ||||| |||  |||| |||  |||||||| |||    
T  23336 ataacggtaaaatatcactaatggtcac-taaacggtaaaatcataatt-ttactctagtaacttagtaaaacaactattcttactaaccactaaaagta 23433  T
Q  389 attctcaccaa 399  Q
    | |||||||||    
T  23434 actctcaccaa 23444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Complemental strand, 31316 - 31236
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| ||||||||| |||  || ||||||| ||||||  |||| ||||||||||| ||||||||  |||||||||    
T  31316 aacggtaaaatataaccaacggttact--aacggtaaaa-actaatctctacactagtaacttagtaaaataagggttctcact 31236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 2666 - 2559
Alignment:
Q  290 taacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaa 389  Q
    |||||||||||| |||| |||||||||| ||| ||||||||  || ||  ||| ||||||||||| ||||| ||| |||||||||   ||||||| ||||    
T  2666 taacggtaaaatgtcactaacggtcact-aaacggtaaaatcttagttt-tactctagtaacttagtaaaacaacggttctcactaatcactaaaagtaa 2569  T
Q  390 ttctcaccaa 399  Q
    ||||| ||||    
T  2568 ttctcgccaa 2559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 1950 - 1871
Alignment:
Q  260 caactcaattccaaaatatttctacactcataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattacta 341  Q
    ||||||||||| ||||| |||||||||||  |||||||||| | |  |||||||||||| ||||||||||| ||||| ||||    
T  1950 caactcaattctaaaatgtttctacactctaaacggtaaaaca-ctacaacggtcactt-aatggtaaaattctaataacta 1871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 23246 - 23177
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||| ||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  23246 aacggtaaaatataaccaacagtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 23177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 7096 - 7027
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||||||| |||||| ||||||  || ||||||| |||||| ||||| ||||||||||| ||||||||    
T  7096 aacggtaaaatataaccaacagtcact--aacggtaaaa-actaatcactacactagtaacttagtaaaataa 7027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 30896 - 30791
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||||    
T  30896 aacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaat 30800  T
Q  391 tctcaccaa 399  Q
    || ||||||    
T  30799 tcccaccaa 30791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 41948 - 42053
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgtaat 390  Q
    ||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||||    
T  41948 aacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagtaat 42044  T
Q  391 tctcaccaa 399  Q
    || ||||||    
T  42045 tcccaccaa 42053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 8612 - 8692
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcact 374  Q
    ||||||||||||| || ||||||||||  ||  |||||| |||||| ||||| ||||||||||| ||||||||  |||||||||    
T  8612 aacggtaaaatataacgaacggtcact--aactgtaaaa-actaatcactacactagtaacttagtaaaataagggttctcact 8692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 11170 - 11142
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcact 317  Q
    |||||||||||||||||||||||||||||    
T  11170 ataacggtaaaatatcaccaacggtcact 11142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 44176 - 44246
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||| ||| |||||||||||| |||| ||||||| |||||| ||| | ||||||||||| ||||||||    
T  44176 aacggtaaattataaccaacggtcac-taaacggtaaaa-actaatcacttcactagtaacttagtaaaataa 44246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Original strand, 54479 - 54549
Alignment:
Q  291 aacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataa 363  Q
    ||||||||| ||| |||||||||||| |||| ||||||| |||||| ||| | ||||||||||| ||||||||    
T  54479 aacggtaaattataaccaacggtcac-taaacggtaaaa-actaatcacttcactagtaacttagtaaaataa 54549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 193117 - 193017
Alignment:
Q  289 ataacggtaaaatatcaccaacggtcacttaaatggtaaaatactaattactaccctagtaacttaataaaataacagttctcactcgccactaaacgta 388  Q
    ||||||||||||| |||| |||||||||| ||| ||||||||   ||||  ||| ||||||||||||| |||||||  ||||||||   ||||||| |||    
T  193117 ataacggtaaaatgtcactaacggtcact-aaacggtaaaatctcaatt--tactctagtaacttaatgaaataactattctcactaatcactaaaagta 193021  T
Q  389 attc 392  Q
    ||||    
T  193020 attc 193017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University