View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16405_high_4 (Length: 356)
Name: NF16405_high_4
Description: NF16405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16405_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 75 - 352
Target Start/End: Complemental strand, 48959147 - 48958870
Alignment:
| Q |
75 |
taaagaaggaaagtttgcatatactttcttccaagatacattattgaggttggatcattcttgttcaacatttcttactcaaatgcacacaacaagaggc |
174 |
Q |
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| T |
48959147 |
taaagaaggaaagtttgcagatactttcttccaagatacattattgaggttggatcattcttgttcaacatttcttactcaaatgcacacaacaagaggc |
48959048 |
T |
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| Q |
175 |
aagccttaagacaggggatgcacacaatccgtctcatctctataattgaactcgacccgtatccatgatgtccctttaatcaaacctaaaccaagttatt |
274 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48959047 |
aagccttaagacaggggatgcacacaatccgcctcatctctataattgaactcgacccgtatccatgatgtccctttaatcaaacctaaaccaagttatt |
48958948 |
T |
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| Q |
275 |
aaggtcgtgtctagcattgtttcatgaaagaaattaaaacaaagttgaagtggatcatatttctttgtttgagatata |
352 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48958947 |
aaggtcgtgtctagcattgtttcatgaaagaaattaaaacaaagttgaagtggatcatatttctttgtttgagatata |
48958870 |
T |
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