View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16407_low_19 (Length: 224)
Name: NF16407_low_19
Description: NF16407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16407_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 42223121 - 42222928
Alignment:
| Q |
12 |
agtgagaagaatggaaaggaaaatggaaccatttcaagtcagagtaaggttcagaagaatagaattgatatgcccattgtaaaacatccagcggccaccc |
111 |
Q |
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| T |
42223121 |
agtgaaaagaatggaaaggaaaatggaaacatttcaagtcagagtaaggttcagaagaatagaattgatacgcccattgtaaaacatccaacggccaccc |
42223022 |
T |
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| Q |
112 |
aagggcttaaacgttcacctgcgcaataacatgtaaactaaagtagtcaataaatctcaaatagaggaaaagccaaactagaagaccacaatgc |
205 |
Q |
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| T |
42223021 |
aagggcttaaacgttcacctgcgcaataacatgtaaactaaagtagtcaataaatctcgaatagaggaaaagccaaactagaagaccacaatgc |
42222928 |
T |
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