View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16408_high_9 (Length: 311)
Name: NF16408_high_9
Description: NF16408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16408_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 46708756 - 46708457
Alignment:
| Q |
1 |
aaattgttccacgcattcttttacttaggatacttcatctaaataagggatcatcactaccttaaaagttaaaacctgcatcatacagattgagtagggt |
100 |
Q |
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| T |
46708756 |
aaattgttccacgtattcttttacttaggatacttcatctaaataagggatcatcactaccttaaaagttaaaacctgcatcatacagattgagtagt-t |
46708658 |
T |
|
| Q |
101 |
agttgtagggtgaagtagtatttatttggtgttggtgtattattgtactttgtttctaatatttgatgatcatttaccatttattttgatataataaata |
200 |
Q |
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| T |
46708657 |
atttgtagggtgaagtagtatttatttggtgttggtgtattattgtactttgtttctaatatttgatgatcatttaccatttattttgatataataaata |
46708558 |
T |
|
| Q |
201 |
acaactagtattatgattatttaccatttatttgtcttcttaacgtgtttagattttcgactttatttgctgctaactatgtcttcacttgtaacccttt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46708557 |
acaactagtattatgattatttaccatttatttgtcttcttaacgtgtttagactttcgactttatttgctgctaactatgtcttcacttgtaacccttt |
46708458 |
T |
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