View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16409_high_13 (Length: 217)
Name: NF16409_high_13
Description: NF16409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16409_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 32731625 - 32731812
Alignment:
| Q |
17 |
cagagaattcagaaaagcctttcccatttacctatataataaaccaaaataaatgaaacattagtataaagcaattagccctagctttattactacaaca |
116 |
Q |
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| T |
32731625 |
cagagaattcagaaaagcctttcccatttacctatataataaaccaaaataaatgaaacattagtataaagcaattagccctagctttattactacaaca |
32731724 |
T |
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| Q |
117 |
tggtactactagttagtatatgagttt-----ataaagatacactgcattaataaaacattggataaaagaatgttgaaccttaagag |
199 |
Q |
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| T |
32731725 |
tggtactactagttagtatatgagtttataaaataaagatacgctgcattaataaaacattggataaaagaatgttgaaccttaagag |
32731812 |
T |
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