View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1640_low_10 (Length: 332)

Name: NF1640_low_10
Description: NF1640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1640_low_10
NF1640_low_10
[»] chr5 (56 HSPs)
chr5 (180-326)||(27652438-27652584)
chr5 (187-326)||(4885686-4885826)
chr5 (178-274)||(4883184-4883280)
chr5 (186-274)||(27658587-27658676)
chr5 (180-287)||(13306332-13306439)
chr5 (205-287)||(36498486-36498569)
chr5 (181-268)||(41084209-41084296)
chr5 (205-287)||(36499221-36499303)
chr5 (178-287)||(21639908-21640017)
chr5 (179-287)||(39760567-39760676)
chr5 (180-287)||(459468-459576)
chr5 (178-287)||(8407378-8407488)
chr5 (181-287)||(10623495-10623601)
chr5 (178-287)||(11445831-11445941)
chr5 (205-287)||(25752942-25753024)
chr5 (206-268)||(39047405-39047467)
chr5 (199-287)||(5382398-5382486)
chr5 (179-287)||(9475177-9475286)
chr5 (179-287)||(12403557-12403666)
chr5 (199-268)||(13544574-13544643)
chr5 (179-287)||(17526828-17526937)
chr5 (199-287)||(26394900-26394988)
chr5 (206-287)||(27500926-27501006)
chr5 (206-287)||(29235477-29235558)
chr5 (179-287)||(38395379-38395488)
chr5 (179-287)||(38396146-38396255)
chr5 (199-287)||(38482972-38483061)
chr5 (198-287)||(38978424-38978513)
chr5 (199-287)||(39048465-39048554)
chr5 (199-287)||(42341144-42341233)
chr5 (180-287)||(6844940-6845048)
chr5 (180-287)||(8408155-8408263)
chr5 (180-287)||(17526055-17526163)
chr5 (181-287)||(1144385-1144492)
chr5 (181-287)||(8159935-8160042)
chr5 (181-287)||(11445060-11445166)
chr5 (199-287)||(38465838-38465928)
chr5 (181-287)||(39761341-39761448)
chr5 (205-287)||(1830169-1830251)
chr5 (205-287)||(10622764-10622845)
chr5 (178-287)||(12737047-12737157)
chr5 (178-287)||(12799870-12799980)
chr5 (181-287)||(16868454-16868560)
chr5 (178-287)||(19292224-19292334)
chr5 (205-287)||(40315636-40315718)
chr5 (181-287)||(41210237-41210343)
chr5 (206-287)||(746364-746444)
chr5 (179-287)||(3508822-3508931)
chr5 (180-277)||(5573962-5574058)
chr5 (199-287)||(6680508-6680597)
chr5 (199-287)||(25338141-25338230)
chr5 (199-287)||(29835371-29835460)
chr5 (199-287)||(747517-747605)
chr5 (180-287)||(19289117-19289225)
chr5 (178-262)||(26359886-26359969)
chr5 (180-287)||(43067514-43067622)
[»] chr8 (38 HSPs)
chr8 (181-326)||(27973212-27973357)
chr8 (181-326)||(28030481-28030626)
chr8 (181-274)||(27972113-27972207)
chr8 (181-274)||(28029382-28029476)
chr8 (199-287)||(3177799-3177888)
chr8 (180-287)||(10443057-10443165)
chr8 (180-287)||(14450739-14450846)
chr8 (178-287)||(41578079-41578189)
chr8 (205-287)||(42355571-42355653)
chr8 (181-287)||(44444809-44444914)
chr8 (179-287)||(39324458-39324566)
chr8 (181-287)||(355944-356051)
chr8 (178-287)||(17925241-17925351)
chr8 (205-287)||(43433671-43433753)
chr8 (181-287)||(29100624-29100732)
chr8 (181-262)||(40449826-40449907)
chr8 (199-287)||(41543259-41543348)
chr8 (179-287)||(12765085-12765193)
chr8 (180-287)||(28775999-28776107)
chr8 (180-287)||(31127665-31127773)
chr8 (181-287)||(12383074-12383181)
chr8 (200-287)||(12503168-12503255)
chr8 (205-287)||(32989905-32989988)
chr8 (205-287)||(38256423-38256506)
chr8 (180-262)||(9737162-9737244)
chr8 (205-287)||(11179978-11180059)
chr8 (206-287)||(20166696-20166778)
chr8 (181-287)||(31203870-31203976)
chr8 (205-287)||(44445556-44445638)
chr8 (199-287)||(14053957-14054046)
chr8 (181-262)||(15565632-15565713)
chr8 (199-287)||(18809587-18809676)
chr8 (221-287)||(32989173-32989241)
chr8 (180-287)||(15211534-15211642)
chr8 (215-287)||(20832791-20832863)
chr8 (180-287)||(24573982-24574089)
chr8 (215-287)||(39407098-39407169)
chr8 (180-287)||(44879824-44879932)
[»] chr4 (47 HSPs)
chr4 (190-326)||(22102203-22102340)
chr4 (181-274)||(22114956-22115050)
chr4 (245-326)||(38717090-38717172)
chr4 (242-326)||(12633491-12633576)
chr4 (179-287)||(19169290-19169399)
chr4 (199-287)||(40034361-40034449)
chr4 (205-287)||(36076555-36076638)
chr4 (181-287)||(36077266-36077373)
chr4 (205-287)||(38392048-38392131)
chr4 (200-287)||(22525269-22525357)
chr4 (199-287)||(42341712-42341800)
chr4 (199-277)||(6194899-6194977)
chr4 (181-287)||(13994502-13994608)
chr4 (181-287)||(26171677-26171783)
chr4 (178-287)||(50605214-50605324)
chr4 (205-287)||(54445560-54445642)
chr4 (199-260)||(205183-205244)
chr4 (180-261)||(1862148-1862228)
chr4 (199-287)||(6955559-6955647)
chr4 (178-287)||(22731054-22731163)
chr4 (178-287)||(24792509-24792618)
chr4 (199-287)||(28255920-28256009)
chr4 (179-287)||(36870095-36870204)
chr4 (199-287)||(40146382-40146471)
chr4 (206-287)||(42342594-42342675)
chr4 (198-287)||(55497254-55497343)
chr4 (199-287)||(22535965-22536053)
chr4 (200-287)||(22731827-22731915)
chr4 (199-287)||(40278261-40278348)
chr4 (180-287)||(50182024-50182132)
chr4 (181-287)||(47308449-47308556)
chr4 (181-287)||(23475129-23475235)
chr4 (205-287)||(27179819-27179900)
chr4 (205-287)||(35194875-35194957)
chr4 (205-287)||(36111502-36111584)
chr4 (206-287)||(54284101-54284182)
chr4 (199-287)||(6956271-6956360)
chr4 (199-287)||(18436633-18436722)
chr4 (180-277)||(30317557-30317654)
chr4 (199-287)||(46614736-46614825)
chr4 (179-287)||(48800408-48800517)
chr4 (179-260)||(56279765-56279845)
chr4 (199-287)||(6239111-6239199)
chr4 (199-287)||(6259815-6259903)
chr4 (205-287)||(19538473-19538554)
chr4 (199-287)||(23466379-23466467)
chr4 (180-287)||(37998773-37998881)
[»] chr3 (54 HSPs)
chr3 (18-170)||(47917177-47917316)
chr3 (181-277)||(29491998-29492095)
chr3 (180-287)||(10657145-10657253)
chr3 (178-287)||(13342366-13342476)
chr3 (205-287)||(45970729-45970811)
chr3 (206-287)||(33236771-33236852)
chr3 (181-262)||(35234839-35234920)
chr3 (180-287)||(3938249-3938357)
chr3 (181-277)||(46651169-46651265)
chr3 (180-287)||(52170928-52171036)
chr3 (181-287)||(3937564-3937671)
chr3 (180-287)||(10435412-10435519)
chr3 (205-287)||(31582616-31582699)
chr3 (180-287)||(34503625-34503731)
chr3 (205-287)||(34941683-34941766)
chr3 (178-287)||(9103982-9104091)
chr3 (178-260)||(40278100-40278182)
chr3 (179-261)||(54627021-54627103)
chr3 (180-287)||(3370776-3370884)
chr3 (180-287)||(13341593-13341701)
chr3 (180-287)||(36026968-36027076)
chr3 (199-287)||(36951896-36951984)
chr3 (179-287)||(40279162-40279270)
chr3 (200-287)||(24086865-24086952)
chr3 (180-287)||(29006882-29006989)
chr3 (181-287)||(33305152-33305259)
chr3 (181-287)||(39172504-39172611)
chr3 (205-287)||(39285388-39285470)
chr3 (181-287)||(47768098-47768205)
chr3 (181-287)||(53081915-53082019)
chr3 (178-287)||(11653802-11653912)
chr3 (178-287)||(14509169-14509279)
chr3 (178-287)||(17754843-17754953)
chr3 (178-287)||(19056163-19056273)
chr3 (206-287)||(38598890-38598972)
chr3 (199-287)||(4584018-4584107)
chr3 (199-287)||(23323225-23323314)
chr3 (178-287)||(40783421-40783530)
chr3 (206-287)||(43353557-43353638)
chr3 (180-287)||(43914708-43914817)
chr3 (205-262)||(45258725-45258782)
chr3 (179-287)||(45969316-45969425)
chr3 (206-287)||(55154123-55154204)
chr3 (181-261)||(3021061-3021141)
chr3 (180-287)||(11652851-11652959)
chr3 (205-277)||(24783173-24783245)
chr3 (180-287)||(35154661-35154769)
chr3 (180-287)||(35235924-35236032)
chr3 (178-258)||(36791773-36791853)
chr3 (215-287)||(40009342-40009414)
chr3 (180-256)||(40066603-40066679)
chr3 (199-287)||(42856785-42856873)
chr3 (200-287)||(45252466-45252553)
chr3 (197-261)||(54493674-54493738)
[»] chr7 (45 HSPs)
chr7 (180-326)||(45745567-45745705)
chr7 (178-292)||(45725269-45725384)
chr7 (180-287)||(38170900-38171007)
chr7 (179-275)||(12231005-12231101)
chr7 (21-82)||(18851544-18851605)
chr7 (180-261)||(16082978-16083059)
chr7 (199-287)||(19072183-19072270)
chr7 (178-287)||(19071436-19071546)
chr7 (181-287)||(30890212-30890318)
chr7 (205-287)||(33210281-33210363)
chr7 (178-287)||(34345217-34345327)
chr7 (206-287)||(21175986-21176067)
chr7 (179-287)||(46100897-46101006)
chr7 (182-287)||(19495860-19495966)
chr7 (198-260)||(34959174-34959236)
chr7 (181-287)||(36900756-36900862)
chr7 (205-287)||(37731602-37731684)
chr7 (179-287)||(29418129-29418238)
chr7 (180-287)||(3627935-3628043)
chr7 (178-262)||(5668242-5668326)
chr7 (98-134)||(18851505-18851541)
chr7 (179-287)||(24181873-24181981)
chr7 (200-287)||(39628393-39628481)
chr7 (180-287)||(41409585-41409693)
chr7 (180-287)||(45154908-45155016)
chr7 (181-287)||(17272554-17272661)
chr7 (181-287)||(38171666-38171773)
chr7 (181-287)||(40667924-40668031)
chr7 (221-287)||(46100165-46100232)
chr7 (82-116)||(6429636-6429670)
chr7 (181-227)||(15652554-15652600)
chr7 (205-287)||(17775301-17775383)
chr7 (206-287)||(18031720-18031802)
chr7 (182-268)||(28294240-28294326)
chr7 (205-275)||(38184196-38184266)
chr7 (206-287)||(44388404-44388486)
chr7 (178-262)||(14103927-14104011)
chr7 (178-262)||(14413944-14414028)
chr7 (206-287)||(21366266-21366347)
chr7 (206-287)||(35004215-35004296)
chr7 (179-287)||(35499342-35499451)
chr7 (206-287)||(42029222-42029303)
chr7 (199-287)||(47170202-47170291)
chr7 (180-256)||(26928070-26928146)
chr7 (180-287)||(41080261-41080369)
[»] chr1 (52 HSPs)
chr1 (200-287)||(9681018-9681105)
chr1 (178-287)||(36724037-36724147)
chr1 (179-287)||(41115810-41115918)
chr1 (181-287)||(35894065-35894172)
chr1 (181-287)||(43506008-43506115)
chr1 (181-287)||(48721507-48721612)
chr1 (180-262)||(49596113-49596195)
chr1 (182-287)||(11201899-11202004)
chr1 (178-287)||(16834362-16834470)
chr1 (199-287)||(27234250-27234339)
chr1 (179-287)||(37612829-37612938)
chr1 (199-287)||(38623833-38623922)
chr1 (180-287)||(20898513-20898621)
chr1 (180-287)||(20899285-20899393)
chr1 (181-261)||(24250408-24250488)
chr1 (199-287)||(35393168-35393256)
chr1 (178-262)||(46294434-46294518)
chr1 (205-287)||(11992757-11992840)
chr1 (181-287)||(13242194-13242301)
chr1 (180-287)||(24982644-24982751)
chr1 (200-287)||(29674315-29674402)
chr1 (180-286)||(6783127-6783232)
chr1 (205-287)||(8384126-8384208)
chr1 (179-287)||(29330061-29330170)
chr1 (203-287)||(45216772-45216857)
chr1 (180-287)||(48803926-48804035)
chr1 (180-287)||(3898431-3898539)
chr1 (200-287)||(32537202-32537289)
chr1 (185-268)||(6783890-6783973)
chr1 (181-287)||(8896920-8897027)
chr1 (200-286)||(12770084-12770171)
chr1 (181-287)||(37613602-37613709)
chr1 (181-275)||(44744625-44744719)
chr1 (180-287)||(51619408-51619515)
chr1 (179-276)||(8741723-8741821)
chr1 (205-274)||(24481961-24482031)
chr1 (205-287)||(25227429-25227511)
chr1 (205-287)||(25859607-25859689)
chr1 (178-287)||(31196795-31196905)
chr1 (182-287)||(31435507-31435613)
chr1 (180-262)||(43680363-43680445)
chr1 (181-262)||(44431180-44431262)
chr1 (181-262)||(9680255-9680336)
chr1 (205-262)||(42413126-42413183)
chr1 (206-287)||(43759577-43759657)
chr1 (180-261)||(52869657-52869738)
chr1 (199-260)||(52869926-52869987)
chr1 (203-287)||(9033577-9033661)
chr1 (204-260)||(42432133-42432189)
chr1 (206-287)||(44156454-44156536)
chr1 (179-287)||(45507888-45507996)
chr1 (205-257)||(49596002-49596054)
[»] scaffold0015 (1 HSPs)
scaffold0015 (179-275)||(42518-42614)
[»] chr2 (34 HSPs)
chr2 (180-287)||(5439045-5439153)
chr2 (180-287)||(9707866-9707974)
chr2 (181-287)||(22063901-22064008)
chr2 (181-287)||(28149862-28149968)
chr2 (215-287)||(25992597-25992670)
chr2 (182-262)||(41286276-41286357)
chr2 (179-287)||(44257984-44258093)
chr2 (202-262)||(7338868-7338928)
chr2 (180-287)||(16057270-16057378)
chr2 (200-287)||(25774816-25774904)
chr2 (200-287)||(28150896-28150984)
chr2 (180-287)||(28637457-28637564)
chr2 (205-268)||(3364065-3364128)
chr2 (198-277)||(15829925-15830004)
chr2 (205-287)||(18059499-18059582)
chr2 (181-287)||(19222864-19222971)
chr2 (181-287)||(41727107-41727214)
chr2 (205-287)||(45159603-45159686)
chr2 (205-287)||(122250-122332)
chr2 (205-287)||(6166952-6167034)
chr2 (178-287)||(17815459-17815569)
chr2 (181-262)||(15830958-15831038)
chr2 (179-287)||(17816219-17816327)
chr2 (181-262)||(43130071-43130151)
chr2 (180-268)||(5440093-5440181)
chr2 (199-287)||(6166201-6166288)
chr2 (205-277)||(9708972-9709044)
chr2 (180-260)||(19223663-19223743)
chr2 (180-287)||(26367326-26367434)
chr2 (178-270)||(35892331-35892423)
chr2 (200-287)||(37225221-37225309)
chr2 (180-287)||(40598418-40598526)
chr2 (181-261)||(42793810-42793890)
chr2 (180-287)||(45629918-45630026)
[»] scaffold0343 (1 HSPs)
scaffold0343 (178-287)||(10124-10234)
[»] scaffold0444 (1 HSPs)
scaffold0444 (179-287)||(8031-8140)
[»] chr6 (21 HSPs)
chr6 (180-287)||(18739306-18739413)
chr6 (205-287)||(16894434-16894517)
chr6 (181-287)||(22822177-22822284)
chr6 (205-287)||(29723096-29723179)
chr6 (178-287)||(2318460-2318569)
chr6 (178-287)||(8743069-8743178)
chr6 (178-287)||(14394669-14394779)
chr6 (205-287)||(15191811-15191892)
chr6 (205-287)||(15468659-15468740)
chr6 (180-287)||(15968521-15968629)
chr6 (181-287)||(8812045-8812152)
chr6 (181-287)||(8940137-8940244)
chr6 (181-287)||(15127695-15127801)
chr6 (205-287)||(22504247-22504330)
chr6 (200-287)||(26610427-26610516)
chr6 (199-287)||(5417476-5417565)
chr6 (178-287)||(20856710-20856819)
chr6 (179-287)||(23075328-23075437)
chr6 (181-262)||(25404075-25404156)
chr6 (181-262)||(32628680-32628761)
chr6 (199-287)||(13209850-13209937)
[»] scaffold0006 (2 HSPs)
scaffold0006 (205-287)||(41349-41432)
scaffold0006 (181-262)||(43420-43501)
[»] scaffold0004 (1 HSPs)
scaffold0004 (205-287)||(130904-130986)
[»] scaffold0445 (1 HSPs)
scaffold0445 (205-277)||(13586-13658)
[»] scaffold0031 (2 HSPs)
scaffold0031 (179-287)||(94989-95096)
scaffold0031 (178-287)||(94243-94352)
[»] scaffold0498 (1 HSPs)
scaffold0498 (181-287)||(5183-5290)
[»] scaffold0001 (1 HSPs)
scaffold0001 (178-261)||(185594-185677)
[»] scaffold0572 (1 HSPs)
scaffold0572 (181-283)||(1719-1821)
[»] scaffold0060 (2 HSPs)
scaffold0060 (178-287)||(7078-7188)
scaffold0060 (180-260)||(66584-66664)
[»] scaffold0036 (1 HSPs)
scaffold0036 (178-287)||(12288-12398)
[»] scaffold0672 (1 HSPs)
scaffold0672 (181-234)||(6365-6418)


Alignment Details
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 180 - 326
Target Start/End: Original strand, 27652438 - 27652584
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  27652438 tgagtaaatggtcaaaaacccccccgaaattgcaggtttcgtcaattacccccccgcagttcacaaaacgtcaattaccccccgaaattacataacgtca 27652537  T
Q  280 gtcaatttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27652538 gtcaatttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 27652584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 187 - 326
Target Start/End: Complemental strand, 4885826 - 4885686
Alignment:
Q  187 atagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaat 285  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| || || |||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  4885826 atagacaaaaacccccctgaaattgcaggtttcgtcaattacccccttgtagttcacaaaatgtcaattacccccccgaaattacataacgtcagtcaat 4885727  T
Q  286 ttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4885726 ttcgtccttctgttaaattgttctgtgaaaggtgatgatgt 4885686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 4883184 - 4883280
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataa 274  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||| ||   ||||| ||||||||||||||| ||||||||||||||||||    
T  4883184 attgaggaaatagtcaaaaactcccccgaaattgcaggtttcgtcaattacc-cctcacagttcacaaaacgtcaattacccccccgaaattacataa 4883280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 27658676 - 27658587
Alignment:
Q  186 aatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataa 274  Q
    |||||||||||| ||||| ||| ||||||||||| ||||||||| |||||||||| |||||||||||| || |||||||||||| |||||    
T  27658676 aatagtcaaaaacccccctgaatttgcaggtttcttcaattacccccctgcagttcacaaaacgtcaaatacccccccgaaattgcataa 27658587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 13306332 - 13306439
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||    | ||| ||||||| | ||||| ||||||||||||||| |||| ||||||| |||||||||||| |||||| || ||||| |    
T  13306332 tgagtaaatagtcaatttcctccctgaaattgtaagtttcatcaattacctccctgaagttaacaaaacttcaattaccccctgaaatttcacaacgtta 13306431  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  13306432 gtcaattt 13306439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 36498486 - 36498569
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  36498486 gaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 36498569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 41084209 - 41084296
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaatt 268  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||||| || || | || |||||||||||||||||||| ||||||    
T  41084209 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattaccccctgaaatt 41084296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 36499303 - 36499221
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  36499303 gaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 36499221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 21639908 - 21640017
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||| |||| |||||| || |||||    
T  21639908 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattatcccctgaaatttcacaacgt 21640007  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  21640008 tagtcaattt 21640017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 39760567 - 39760676
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  39760567 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 39760666  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  39760667 tagtcaattt 39760676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 459468 - 459576
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  459468 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 459567  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  459568 agtcaattt 459576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 8407378 - 8407488
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||| | ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  8407378 attgagtaaatagtcaatttcccctctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 8407477  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  8407478 ttagtcaattt 8407488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 10623601 - 10623495
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||    |||||  |||||| ||||||| ||||||||| | ||| | || ||||||| |||||||||||| |||||| |||||||| |     
T  10623601 gagtaaatagtcaatttcccccctaaaattgtaggtttcatcaattacccctctgaaattaacaaaacatcaattaccccctgaaattgcataacgttaa 10623502  T
Q  281 tcaattt 287  Q
    |||||||    
T  10623501 tcaattt 10623495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 11445941 - 11445831
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||| ||||| |||||| || ||||    
T  11445941 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattatccccctgaaatttcacaacg 11445842  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  11445841 ttagtcaattt 11445831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 25753024 - 25752942
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||||  ||||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  25753024 gaaattgtaagtttcgtcaattactcccctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 25752942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 39047405 - 39047467
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaatt 268  Q
    |||||| |||||||||||||||||  |||| |||| ||||||| ||||||||||||| |||||    
T  39047405 aaattgtaggtttcgtcaattaccctcctgaagttaacaaaacttcaattacccccctaaatt 39047467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 5382486 - 5382398
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  5382486 ccccctgaaattgtaagtttcgtcaattacc-ccctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 5382398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 9475177 - 9475286
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    | ||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  9475177 ttgagtaaatagtcaatttcctccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 9475276  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  9475277 tagtcaattt 9475286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 12403557 - 12403666
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattac-cccccgaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||| ||||||||||| || |||||    
T  12403557 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattactcccccgaaatttcacaacgt 12403656  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  12403657 tactcaattt 12403666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 13544574 - 13544643
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaatt 268  Q
    ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||| ||||||    
T  13544574 ccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaatt 13544643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 17526937 - 17526828
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || || ||    
T  17526937 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaatgt 17526838  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  17526837 tagtcaattt 17526828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 26394988 - 26394900
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||||||||| ||||||||||||||||| ||||| | || ||||||| ||||||| ||||| ||| || |||||||| | |||||||    
T  26394988 ccccccgaaattgtaggtttcgtcaattacc-ccctgaaattaacaaaacttcaattatccccctgaagttgcataacgttaatcaattt 26394900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 27501006 - 27500926
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||||| ||||||||||||||| ||||| | || ||||||| |||||||||||  |||||| |||||||| | |||||||    
T  27501006 aaattgcatgtttcgtcaattacc-ccctgaaattaacaaaacttcaattaccccttgaaattgcataacgttaatcaattt 27500926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 29235477 - 29235558
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| | |||||||||||||||  |||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  29235477 aaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 29235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 38395379 - 38395488
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||  ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  38395379 ttgagtaaatagtcaatttcccccttgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 38395478  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  38395479 tagtcaattt 38395488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 38396255 - 38396146
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| || |||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  38396255 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 38396156  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  38396155 tagtcaattt 38396146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 38482972 - 38483061
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  38482972 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 38483061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 38978513 - 38978424
Alignment:
Q  198 accccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| ||||||| | ||||||||||||||| ||||  | || ||||||| |||||||||||| |||||| || ||||| | |||||||    
T  38978513 accccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaacttcaattaccccctgaaattgcacaacgttaatcaattt 38978424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 39048554 - 39048465
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||| || || | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  39048554 ccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 39048465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 42341144 - 42341233
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||| || |||||| |||||| |||||||||||    
T  42341144 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccctcctgaaatttcataacttcagtcaattt 42341233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 6844940 - 6845048
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    || || ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  6844940 tgagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 6845039  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  6845040 agtcaattt 6845048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 8408263 - 8408155
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| |||||||||  |||| | || ||||||| ||||||||||||| |||||| || |||||     
T  8408263 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 8408164  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  8408163 agtcaattt 8408155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 17526055 - 17526163
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| | ||| | || ||||||| ||||||||||||| |||||| || |||||     
T  17526055 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 17526154  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  17526155 agtcaattt 17526163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 1144492 - 1144385
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattac-cccccgaaattacataacgtca 279  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||||| ||||  | || |||||| ||||||||| |||| |||||| || ||||| |    
T  1144492 gagtaaatagtcaactacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattactcccctgaaattgcacaacgtta 1144393  T
Q  280 gtcaattt 287  Q
     |||||||    
T  1144392 atcaattt 1144385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 8159935 - 8160042
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || | ||||| ||||||||||||| |||||| || ||||| |    
T  8159935 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaataaaacttcaattacccccctgaaatttcacaacgtta 8160034  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  8160035 gtcaattt 8160042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 11445060 - 11445166
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||||||||||| | ||||| ||||||||| ||||  | || ||||||| ||||||||||||| |||||| || ||||| |    
T  11445060 gagtaaatagtcaatttcccccccgaaattgtaagtttcatcaattacc-ccctaaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 11445158  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  11445159 gtcaattt 11445166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 38465928 - 38465838
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc--gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||  |||||| || ||||| |||||||||    
T  38465928 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccccctgaaatttcacaacgttagtcaattt 38465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 39761448 - 39761341
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| || || | || ||||||| ||||||||||||| |||||| || ||||| |    
T  39761448 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 39761349  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  39761348 gtcaattt 39761341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 1830251 - 1830169
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||||| ||| | || ||||||| |||||||||||  |||||| || ||||| |||||||||    
T  1830251 gaaattgtaagtttcatcaattacctctctgaaattaacaaaacttcaattaccccatgaaatttcacaacgttagtcaattt 1830169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 10622764 - 10622845
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | |||||||||||| |||||| | | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  10622764 gaaattgtaagtttcgtcaattgcctccc-gaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 10622845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 12737157 - 12737047
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||     |||| ||||||| | ||||| ||||||| | ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  12737157 attgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 12737058  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  12737057 ttagtcaattt 12737047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 12799980 - 12799870
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||     |||| ||||||| | ||||| ||||||| | ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  12799980 attgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 12799881  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  12799880 ttagtcaattt 12799870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 16868454 - 16868560
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||    ||||| ||| ||| | ||||| |||||||||  |||| | || ||||||| |||||||||||| |||||| || ||||| ||    
T  16868454 gagtaaatagtcaatttcccccctgaagttgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttag 16868553  T
Q  281 tcaattt 287  Q
    |||||||    
T  16868554 tcaattt 16868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 19292224 - 19292334
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    ||||||||||||| |||  | ||| | ||||||| | ||||||||||||||  ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  19292224 attgagtaaatagacaattacccctctgaaattgtaagtttcgtcaattactcccctgaaattaacaaaacttcaattacccccctgaaattgcacaacg 19292323  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  19292324 ttaatcaattt 19292334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 40315718 - 40315636
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||||| ||| | || ||||||| |||||||||||  |||||| || ||||| |||||||||    
T  40315718 gaaattgtaagtttcatcaattacctctctgaaattaacaaaacttcaattaccccatgaaatttcacaacgttagtcaattt 40315636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 41210343 - 41210237
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||| | || || | || ||||||||||||||| ||||  ||||| || ||||| |     
T  41210343 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattatccccttgaaattaacaaaacgtcaattaaccccttaaattgcacaacgttaa 41210244  T
Q  281 tcaattt 287  Q
    |||||||    
T  41210243 tcaattt 41210237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 746364 - 746444
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| ||||||||||||||||||  ||| | || ||||||| ||||||||| || |||||| |||||||| | |||||||    
T  746364 aaattgtaggtttcgtcaattacct-tctgaaattaacaaaacttcaattacctcctgaaattgcataacgttaatcaattt 746444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 3508931 - 3508822
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| |||||||||   ||| | || ||||||| ||||||||||||| |||||| || |||||    
T  3508931 ttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccttctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 3508832  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  3508831 tagtcaattt 3508822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 5573962 - 5574058
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    |||||||||||||||  | ||| | ||||||| | ||||||||||||||| ||||| | || | ||||| |||||||||||| |||||| || |||||    
T  5573962 tgagtaaatagtcaattatccctctgaaattgtaagtttcgtcaattacc-ccctgaaattaataaaacttcaattaccccctgaaattgcacaacgt 5574058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 6680508 - 6680597
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaatta-cctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||| || ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  6680508 ccccctgaaattgtaagtttcatcaattatcccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 6680597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 25338141 - 25338230
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| | ||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  25338141 ccccctgaaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 25338230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 29835371 - 29835460
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||||   || | || ||||||| ||||||||||||| |||||| ||||||||  ||||||||    
T  29835371 ccccctgaaattgtaagtttcgtcaattacctttttgaaattaacaaaacttcaattacccccctgaaattgcataacgttggtcaattt 29835460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 747605 - 747517
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | |||||||| ||| |  ||||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  747605 ccccctgaaattgtaagtttcgtcgattgctcccctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 747517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 19289117 - 19289225
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccc-tgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    |||||||||||||||    ||| | ||||||| | ||||| ||||||||| ||| || | || ||||||| |||||||||||| |||||| || |||||     
T  19289117 tgagtaaatagtcaatttccccactgaaattgtaagtttcatcaattaccccccctgaaattcacaaaacttcaattaccccctgaaatttcacaacgtt 19289216  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  19289217 agtcaattt 19289225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 26359969 - 26359886
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||||  | ||||| ||||||| |  |||||||||||||| || || | || ||||||| |||||||||||||    
T  26359969 attgagtaaatagtcaatta-ccccctgaaattgtaattttcgtcaattacccccttgaaattaacaaaacttcaattacccccc 26359886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 43067514 - 43067622
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| | ||| | || ||||||| ||||||||||||| |||||| || || ||     
T  43067514 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattacccccctgaaatttcacaatgtt 43067613  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  43067614 agtcaattt 43067622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 27973357 - 27973212
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27973357 gagtaaatggtcaaaaa-ccccccgaaattgcaggtttcgtcaattaccctcctgcagtttacaaaacgtcaattacccccccgaaattacataacgtca 27973259  T
Q  280 gtcaatttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  27973258 gtcaatttcgtccttctgttaagttgttctatgaaaggtgatgatgt 27973212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 181 - 326
Target Start/End: Complemental strand, 28030626 - 28030481
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28030626 gagtaaatggtcaaaaa-ccccccgaaattgcaggtttcgtcaattaccctcctgcagtttacaaaacgtcaattacccccccgaaattacataacgtca 28030528  T
Q  280 gtcaatttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  28030527 gtcaatttcgtccttctgttaagttgttctatgaaaggtgatgatgt 28030481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 27972113 - 27972207
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataa 274  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  27972113 gagtaaatagtcaaaaaaaaccccgaaattgcaggtttcgtcaattacccccccgcagtttacaaaacgtcaattaccccctcgaaattgcataa 27972207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 28029382 - 28029476
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataa 274  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||    
T  28029382 gagtaaatagtcaaaaaaaaccccgaaattgcaggtttcgtcaattacccccccgcagtttacaaaacgtcaattaccccctcgaaattgcataa 28029476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 3177799 - 3177888
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  3177799 ccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 3177888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 10443057 - 10443165
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||||||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  10443057 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 10443156  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  10443157 agtcaattt 10443165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 14450846 - 14450739
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||||| |    
T  14450846 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccccctgaatttaacaaaacttcaattaccccctgaaatttcacaacgtta 14450747  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  14450746 gtcaattt 14450739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 41578189 - 41578079
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||||||||||| | ||||| | || ||||||| ||||||||||||| |||||| |||||||    
T  41578189 attgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattacccccctgaaattgcataacg 41578090  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  41578089 ttaatcaattt 41578079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 42355571 - 42355653
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| |||||||||||||||||  |||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  42355571 gaaattgtaggtttcgtcaattacccacctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 42355653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 44444809 - 44444914
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||  | ||||| ||||||| | |||||||||||||||||| |  | || |||||| ||||||||||||| |||||| |||||||| |     
T  44444809 gagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaattacctccataaaattaacaaaatgtcaattacccccagaaattgcataacgttaa 44444907  T
Q  281 tcaattt 287  Q
    |||||||    
T  44444908 tcaattt 44444914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 39324458 - 39324566
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    ||||||||||||||||    ||||| ||||||| | ||||| |||||||||  |||| | || ||||||| |||||||||||| |||||| || |||||     
T  39324458 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaatttcacaacgtt 39324557  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  39324558 agtcaattt 39324566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 356051 - 355944
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  356051 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 355952  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  355951 gtcaattt 355944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 17925351 - 17925241
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||| ||  | ||||| ||||||| | ||||||||||||||| ||||  | || |||||| |||||||||||||| |||||| || ||||    
T  17925351 attgagtaaatagtgaattacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattgcacaacg 17925252  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  17925251 ttaatcaattt 17925241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 43433753 - 43433671
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  43433753 gaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 43433671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 29100624 - 29100732
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc--gaaattacataacgtc 278  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||  |||||| || |||||     
T  29100624 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccccctgaaatttcacaacgtt 29100723  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  29100724 agtcaattt 29100732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 40449826 - 40449907
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||||| |  || | || |||||||||||||||||||||    
T  40449826 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccctttgaaattaacaaaacgtcaattacccccc 40449907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 41543348 - 41543259
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| ||||||||||||||||| | ||| | || | ||||| ||||||||||||| |||||| |||||||| | |||||||    
T  41543348 ccccctgaaattgtaggtttcgtcaattacccctctgaaattaataaaacttcaattacccccctgaaattgcataacgttaatcaattt 41543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 12765193 - 12765085
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    ||||||||||||||||    ||||  ||||||| | ||||||||||||||  | ||| | || ||||||| |||||||||||| |||||| ||||||||     
T  12765193 ttgagtaaatagtcaattttccccttgaaattgtaagtttcgtcaattactcctctgaaattaacaaaacttcaattaccccctgaaattgcataacgtt 12765094  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  12765093 aatcaattt 12765085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 28775999 - 28776107
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||  | || ||||||| ||||||||||||| |||||| || |||||     
T  28775999 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 28776098  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  28776099 agtcaattt 28776107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 31127773 - 31127665
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || || ||     
T  31127773 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaatgtt 31127674  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  31127673 agtcaattt 31127665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 12383074 - 12383181
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || || || |    
T  12383074 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaaagtta 12383173  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  12383174 gtcaattt 12383181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 12503255 - 12503168
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||||||||| | ||||| ||||||||| ||||  | || ||||||| |||||||||||| |||||| || ||||| | |||||||    
T  12503255 cccccgaaattgtaagtttcatcaattaccgccctaaaattaacaaaacttcaattaccccctgaaattgcacaacgttaatcaattt 12503168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 32989988 - 32989905
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| |||||||| |||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  32989988 gaaattgtaagtttcatcaattacttccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 32989905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 38256423 - 38256506
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacc-ccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| | ||| | || ||||||| ||||||||| ||| |||||| |||||||| | |||||||    
T  38256423 gaaattgtaggtttcgtcaattacccctctgaaattaacaaaacttcaattacctccctgaaattgcataacgttaatcaattt 38256506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 9737244 - 9737162
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||  ||||||| ||||||| | ||||| ||||||||| || || | || ||||||| |||| ||||||||    
T  9737244 tgagtaaatagtcaattaaccccctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaactacccccc 9737162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 11180059 - 11179978
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||| ||||||| | || ||||||| ||||||||| || |||||| |||||||| | |||||||    
T  11180059 gaaattgtaagtttcgtcaatta-ctccctgaaattaacaaaacttcaattacctcctgaaattgcataacgttaatcaattt 11179978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 20166778 - 20166696
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||||||||||||| || || | || ||||||||||||||||||||| |||||| || ||||| | |||||||    
T  20166778 aaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattacccccctgaaattgcacaacgttaatcaattt 20166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 31203870 - 31203976
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||    ||||| ||||||| | ||||||||||||||| | ||| | || | ||||| |||||||| ||| |||||| |||||||| |     
T  31203870 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccctctgaaattaagaaaacttcaattactccctgaaattgcataacgttaa 31203969  T
Q  281 tcaattt 287  Q
    |||||||    
T  31203970 tcaattt 31203976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 44445638 - 44445556
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | |||| |||||||||| || || | || |||||||||||||||||||| |||||| || ||||| | |||||||    
T  44445638 gaaattgtaagttttgtcaattacccccttgaaattaacaaaacgtcaattaccccctgaaattgcacaacgttaatcaattt 44445556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 14054046 - 14053957
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| ||||||  | ||||| |||||||||    
T  14054046 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacgttagtcaattt 14053957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 15565713 - 15565632
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||  | ||||  ||||||| | |||| |||||||||| ||||| | || ||||||| |||||||||||||    
T  15565713 gagtaaatagtcaattacccccttgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattacccccc 15565632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 18809587 - 18809676
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || || || |||||||||    
T  18809587 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaatgttagtcaattt 18809676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 32989173 - 32989241
Alignment:
Q  221 tcaattacctccctgcagtttacaaaacgtcaattacccccc--gaaattacataacgtcagtcaattt 287  Q
    ||||||||||||||| | || ||||||| |||||||||||||  |||||| || ||||| |||||||||    
T  32989173 tcaattacctccctgaaattaacaaaacttcaattaccccccctgaaatttcagaacgttagtcaattt 32989241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 15211642 - 15211534
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    || || ||||||| | ||||| |||||||||| |||| | || ||||||| ||||||||||||| |||||| || |||||     
T  15211642 tgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaattaccttcctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 15211543  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  15211542 attcaattt 15211534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 20832863 - 20832791
Alignment:
Q  215 gtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||| |||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||||| | |||||||    
T  20832863 gttttgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaattgcacaacgttaatcaattt 20832791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 24574089 - 24573982
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| || || | || ||||||| ||||||||||||| |||||| || |||||     
T  24574089 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacc-ccatgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 24573991  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  24573990 agtcaattt 24573982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 39407098 - 39407169
Alignment:
Q  215 gtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  39407098 gtttcatcaattacc-ccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 39407169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 44879932 - 44879824
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||  ||||||||||||||||| || || | || ||||||| ||||||| ||||  |||||| ||||||||     
T  44879932 tgagtaaatagtcaattttccccctgaaattataggtttcgtcaattacccccttgaaattaacaaaacttcaattatccccatgaaattgcataacgtt 44879833  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  44879832 aatcaattt 44879824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 5e-53; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 190 - 326
Target Start/End: Original strand, 22102203 - 22102340
Alignment:
Q  190 gtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacgtcagtcaatttc 288  Q
    |||||||| ||||||||||||||||||||||||||||||| | | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22102203 gtcaaaaacccccccgaaattgcaggtttcgtcaattacccctccgcagttcacaaaacgtcaattacccccccgaaattacataacgtcagtcaatttc 22102302  T
Q  289 gtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
     |||||||||||||||||||||||||||||||||||||    
T  22102303 atccttctgttaagttgttctgtgaaaggtgatgatgt 22102340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 22115050 - 22114956
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataa 274  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||| |||||    
T  22115050 gagtaaatagtcaaaaacccccccgaatttgcaggtttcgtcaattacccccctgcagttcacaaaacgtcaaatacccccccgaaattgcataa 22114956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 38717090 - 38717172
Alignment:
Q  245 aaacgtcaattacccc-ccgaaattacataacgtcagtcaatttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || |||| |||||||||    
T  38717090 aaacgtcaattacccccccgaaattacataacgtcagtcaatttcgtctttctgttaagttgttccgttaaagttgatgatgt 38717172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 12633576 - 12633491
Alignment:
Q  242 acaaaacgtcaattacccccc-gaaattacataacgtcagtcaatttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
    ||||||||||||||||||||| ||||||  | | ||||||||||||| ||||||||||||||| |||  || ||||||||||||||    
T  12633576 acaaaacgtcaattacccccccgaaattttacaccgtcagtcaatttggtccttctgttaagtggtttagttaaaggtgatgatgt 12633491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 19169290 - 19169399
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccc-cccgaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| ||||||||||||||||| ||||| | || ||||||| |||||||||| || |||||| ||||||||    
T  19169290 ttgagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattaccctcctgaaattgcataacgt 19169389  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  19169390 taatcaattt 19169399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 40034449 - 40034361
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| |||||||||||||||||  |||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  40034449 ccccctgaaattgtaggtttcgtcaattaccctcctgaatttaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 40034361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 36076555 - 36076638
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  36076555 gaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 36076638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 36077373 - 36077266
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||||||||| || |    
T  36077373 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattacataatgtta 36077274  T
Q  280 gtcaattt 287  Q
     |||||||    
T  36077273 atcaattt 36077266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 38392048 - 38392131
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  38392048 gaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 38392131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 22525357 - 22525269
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||||||||||||||||||| | || ||||||| ||||||||||||| |||||| || ||||| | |||||||    
T  22525357 cccctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaattacccccctgaaattgcacaacgttaatcaattt 22525269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 42341712 - 42341800
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| ||||||||| ||||||| | ||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  42341712 ccccctgaaattgtaggtttcgtgaattacccctctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 42341800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 6194977 - 6194899
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||| |||||| || |||||    
T  6194977 ccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgt 6194899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 13994608 - 13994502
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||||||||| | || ||||||  |||||||||||| |||||| || || || ||    
T  13994608 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctccctgaaattaacaaaatttcaattaccccctgaaatttcacaatgttag 13994509  T
Q  281 tcaattt 287  Q
    |||||||    
T  13994508 tcaattt 13994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 26171677 - 26171783
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||  | ||||| ||||||| | |||||||||||||||  | || | || | |||||||||||||||||| |||||| || ||||| |     
T  26171677 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattaccctcttgaaattaataaaacgtcaattaccccctgaaattgcacaacgttaa 26171776  T
Q  281 tcaattt 287  Q
    |||||||    
T  26171777 tcaattt 26171783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 50605324 - 50605214
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||| |||||||||  |||| | || ||||||| ||||||||||||| |||||| || ||||    
T  50605324 attgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 50605225  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  50605224 ttagtcaattt 50605214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 54445642 - 54445560
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||  |||||| |||||||| | |||||||    
T  54445642 gaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccttgaaattgcataacgttaatcaattt 54445560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 205244 - 205183
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    ||||| ||||||| ||||||||||||||||| ||||| | || ||||||| |||||||||||    
T  205244 ccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccc 205183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 1862228 - 1862148
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    |||||||||||||||  | ||||| ||||||| | ||||||||||||||| || || | || ||||||||||||||||||||    
T  1862228 tgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattaccccc 1862148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 6955559 - 6955647
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||| ||| ||| || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  6955559 ccccctgaaattgtaagtttcgtcaattacc-ccccgcaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 6955647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 22731054 - 22731163
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || |||||||  |||||||| || |||||| || |||||    
T  22731054 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaactccaattacctcctgaaatttcacaacgt 22731153  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  22731154 tagtcaattt 22731163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 24792618 - 24792509
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||||||||||| |||  ||||||  ||||||| | |||||||||||||| | | || | || ||||||| |||||||||||| |||||| || |||||    
T  24792618 attgagtaaatagacaattaaccccttgaaattgtatgtttcgtcaattactttcttgaaattaacaaaacttcaattaccccctgaaattgcacaacgt 24792519  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  24792518 taatcaattt 24792509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 28256009 - 28255920
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  28256009 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 28255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 36870095 - 36870204
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    |||||||||||| |||  | ||||| ||||||| | ||||||||||||||| | ||| | || ||||||| ||||||||||||| |||||| || |||||    
T  36870095 ttgagtaaatagacaattacccccctgaaattgtaagtttcgtcaattaccccactgaaattaacaaaacttcaattacccccctgaaattgcacaacgt 36870194  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  36870195 taatcaattt 36870204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 40146471 - 40146382
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||| || || | || ||||||||||||||||||||| |||||| || ||||| | |||||||    
T  40146471 ccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattacccccctgaaattgcacaacgttaatcaattt 40146382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 42342675 - 42342594
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||||||||||||  ||||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  42342675 aaattgtaagtttcgtcaattactcccctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 42342594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 55497343 - 55497254
Alignment:
Q  198 accccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| ||||||| | |||||||||||||| | | || | || |||||||||||||||| ||| ||||||||| ||||| | |||||||    
T  55497343 accccctgaaattgtaagtttcgtcaattactttcttgaaattaacaaaacgtcaattactccctgaaattacacaacgttaatcaattt 55497254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 22536053 - 22535965
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||| ||| ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  22536053 ccccctgaaattgtaagtttcatcaatcacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 22535965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 22731915 - 22731827
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||||||||||| | ||||| ||||||||| || || | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  22731915 cccccgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 22731827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 40278261 - 40278348
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| |||||||||||||||||| | || | || ||||||| ||||||| |||| |||||| |||||||| | |||||||    
T  40278261 ccccctgaaattgtaggtttcgtcaattacct-catgaaattaacaaaacttcaattatcccctgaaattgcataacgttaatcaattt 40278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 50182132 - 50182024
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||| |     
T  50182132 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacatt 50182033  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  50182032 agtcaattt 50182024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 47308449 - 47308556
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||  | ||||  ||||||| | ||||||||||||||| || || | || ||||||||||| ||||||||| |||||| || ||||| |    
T  47308449 gagtaaatagtcaattatccccttgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcagttacccccctgaaattgcacaacgtta 47308548  T
Q  280 gtcaattt 287  Q
     |||||||    
T  47308549 atcaattt 47308556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 23475129 - 23475235
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||| |  |||| | || ||||||| |||||||||||| |||||| || ||||| ||    
T  23475129 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatcctcctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttag 23475228  T
Q  281 tcaattt 287  Q
    |||||||    
T  23475229 tcaattt 23475235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 27179819 - 27179900
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  27179819 gaaattgtaagtttcatcaattacc-ccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 27179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 35194957 - 35194875
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||| | ||||| | || ||||||| |||||||||||| |||||| || || || |||||||||    
T  35194957 gaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattaccccctgaaattgcacaaagttagtcaattt 35194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 36111502 - 36111584
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||||||| ||| | || ||||||| | |||||||| | |||||| |||||||| | |||||||    
T  36111502 gaaattgtaagtttcgtcaattacctctctgaaattaacaaaactttaattacccactgaaattgcataacgttaatcaattt 36111584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 54284182 - 54284101
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacc-ccccgaaattacataacgtcagtcaattt 287  Q
    |||||| ||||||||||||||||| ||||| | || ||||||| ||||||||| ||| |||||| |||||||| | |||||||    
T  54284182 aaattgtaggtttcgtcaattacc-ccctgaaattaacaaaacatcaattacctccctgaaattgcataacgttaatcaattt 54284101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 6956360 - 6956271
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| |||||| |||||||||| | ||| | || ||||||| ||||||||||||  |||||| |||||||| | |||||||    
T  6956360 ccccctgaaattgtaggttttgtcaattaccccactgaaattaacaaaacttcaattacccccttgaaattgcataacgttaatcaattt 6956271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 18436722 - 18436633
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| || || | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  18436722 ccccctgaaattgtaagtttcatcaattacccccgtgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 18436633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 30317557 - 30317654
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||||||||| |||  | ||||| ||||||| | |||||||||||||||  |||| | || ||||||| ||||||| |||| |||||| || |||||    
T  30317557 tgagtaaataggcaattacccccctgaaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattatcccctgaaatttcacaacgt 30317654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 46614825 - 46614736
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | |||| |||||||||| ||||| | || ||||||| ||||||||||||| |||||| ||||| || | |||||||    
T  46614825 ccccctgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataatgttaatcaattt 46614736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 48800517 - 48800408
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||  | || || ||||||| | ||||||||||||||| |  || | || | ||||||||||||||||||| |||||| || |||||    
T  48800517 ttgagtaaatagtcaattaccctcctgaaattgtaagtttcgtcaattacccctttgaaattaataaaacgtcaattacccccctgaaattgcacaacgt 48800418  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  48800417 taatcaattt 48800408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 56279765 - 56279845
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    ||||||||||||||||  | ||||||||||||| | |||||||||||||||  | || | || ||||||| |||||||||||    
T  56279765 ttgagtaaatagtcaatta-ccccccgaaattgtaagtttcgtcaattaccctcttgaaattaacaaaacatcaattacccc 56279845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 6239199 - 6239111
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| |||||||||  |||| | || ||||||| |||||||||||| |||||  || ||||| |||||||||    
T  6239199 ccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaatatcacaacgttagtcaattt 6239111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 6259903 - 6259815
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| |||||||||  |||| | || ||||||| |||||||||||| |||||  || ||||| |||||||||    
T  6259903 ccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaatatcacaacgttagtcaattt 6259815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 19538554 - 19538473
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||  ||||| | || ||||||| ||||||||||| | |||||| |||||||| | |||||||    
T  19538554 gaaattgtaggtttcgtcaattac--ccctgaaattaacaaaacttcaattacccctctgaaattgcataacgttaatcaattt 19538473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 23466467 - 23466379
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||||   || | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  23466467 ccccctgaaattgtaagtttcatcaattacctttttgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 23466379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 37998881 - 37998773
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||| | ||||| | || ||||||  ||||||||||||| |||||| || |||||     
T  37998881 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaatttcaattacccccctgaaatttcacaacgtt 37998782  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  37998781 agtcaattt 37998773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 47917177 - 47917316
Alignment:
Q  18 aaagattgtttcttcttcttactatttgagaaagggaaaattgggatatctcaaggattttgatttttgattttgattagattcaaaaatggaatgaaag 117  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  47917177 aaagattgcttctttttcttactatttgagaaagggaaaattgggatatctcaaggatt-------------ttgattagattcaaaaatggaatgaaag 47917263  T
Q  118 agatataccgtgtacatatcacacgtgaagaaggaattgggatatctcaagga 170  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  47917264 agatatacggggtacatatcacacgtgaagaaggaattgggatatctcaagga 47917316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 29491998 - 29492095
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||    ||||| ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| ||||||||    
T  29491998 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataacgt 29492095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 10657253 - 10657145
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  10657253 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 10657154  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  10657153 agtcaattt 10657145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 13342476 - 13342366
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  13342476 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 13342377  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  13342376 ttagtcaattt 13342366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 45970811 - 45970729
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| ||||  | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  45970811 gaaattgtaggtttcgtcaattaccccccttaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 45970729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 33236771 - 33236852
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| ||||||||||||||||| ||||| | || ||||||| |||||||||||| ||||||  ||||||| | |||||||    
T  33236771 aaattgtaggtttcgtcaattaccaccctgaaattaacaaaacttcaattaccccctgaaattgaataacgttaatcaattt 33236852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 35234839 - 35234920
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||||    
T  35234839 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccc 35234920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 3938357 - 3938249
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||||||||||||||||| | | || ||||||| ||||||||||| | |||||| ||||||||     
T  3938357 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacctccccgaaattaacaaaacttcaattacccctctgaaattgcataacgtt 3938258  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  3938257 aatcaattt 3938249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 46651265 - 46651169
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||||| || || | || ||||||| |||||||||||| |||||| || |||||    
T  46651265 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattaccccctgaaattgcacaacgt 46651169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 52170928 - 52171036
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||   |||||  ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  52170928 tgagtaaatagtcaatttaccccttgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 52171027  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  52171028 agtcaattt 52171036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 3937564 - 3937671
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    |||||  |||||| ||||||||||||||||  ||||| | || ||||||| ||||||||||||| |||||| |||||||| |    
T  3937564 gagtaaatagtcaatttcccccctaaaattgtaggtttcgtcaattactcccctgaaattaacaaaacttcaattacccccctgaaattgcataacgtta 3937663  T
Q  280 gtcaattt 287  Q
     |||||||    
T  3937664 atcaattt 3937671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 10435412 - 10435519
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || || || |    
T  10435412 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaatgtta 10435511  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  10435512 gtcaattt 10435519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 31582616 - 31582699
Alignment:
Q  205 gaaattgcaggtttcgtcaatta-cctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||| || ||||| |||| ||||||| ||||||||||||||||||| || ||||| |||||||||    
T  31582616 gaaattgtaagtttcatcaattatcccccctgaagttaacaaaacttcaattaccccccgaaatttcacaacgttagtcaattt 31582699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 34503731 - 34503625
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    ||||||||||| |||  | ||||| ||||||  | |||||||||||||| |||||| | || ||||||| |||||||||||| |||||| || ||||| |    
T  34503731 tgagtaaatagacaattacccccctgaaattttaagtttcgtcaattac-tccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgtta 34503633  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  34503632 gtcaattt 34503625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 34941766 - 34941683
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||||||||||||    
T  34941766 gaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtcagtcaattt 34941683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 9104091 - 9103982
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||  | ||||| ||||||| | ||||||||||||||| ||||  | || |||||| |||||||||||||| |||||| || ||||    
T  9104091 attgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccctgaaattgcacaacg 9103993  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  9103992 ttaatcaattt 9103982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 40278100 - 40278182
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    ||||||||||| |||||    ||||| ||||||| ||||||||||||||||| ||||| | || ||||||| |||||||||||    
T  40278100 attgagtaaatggtcaatttcccccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccc 40278182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 54627021 - 54627103
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    ||||||||||||||||  | ||| | ||||||| | ||||||||||||||| ||||| | || ||||||| ||||||||||||    
T  54627021 ttgagtaaatagtcaattacccctctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccc 54627103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 3370884 - 3370776
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| |  |||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| | ||||||     
T  3370884 tgagtaaatagtcaatttcccccctgaaattgtaaatttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcttaacgtt 3370785  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  3370784 agtcaattt 3370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 13341593 - 13341701
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||  ||||| || |||||     
T  13341593 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacatcaattacccccctaaaatttcacaacgtt 13341692  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  13341693 agtcaattt 13341701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 36026968 - 36027076
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataacgtc 278  Q
    ||||||||||| |||  | ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| ||||||| ||||| |||||| || |||||     
T  36026968 tgagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattatccccctgaaatttcacaacgtt 36027067  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  36027068 aatcaattt 36027076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 36951984 - 36951896
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||||||||| | ||||||||||||| | | ||| | || ||||||| |||||||||||| |||||| ||||| || | |||||||    
T  36951984 ccccccgaaattgtaagtttcgtcaattatccctctgaaattaacaaaacttcaattaccccctgaaattgcataatgttaatcaattt 36951896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 40279270 - 40279162
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    ||||||||||||||||    ||||  ||||||| | ||||||||||||||| ||| | | || ||||||| |||||||||||| |||||| ||||| ||     
T  40279270 ttgagtaaatagtcaatttcccccttgaaattgtaagtttcgtcaattacccccccgaaattaacaaaacttcaattaccccctgaaattgcataatgtt 40279171  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  40279170 aatcaattt 40279162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 24086952 - 24086865
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||| ||||||||| ||||| | || || |||| |||||||||||| |||||| || ||||| |||||||||    
T  24086952 cccctgaaattgtaagtttcatcaattacccccctgaaattaaccaaacttcaattaccccctgaaatttcacaacgttagtcaattt 24086865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 29006989 - 29006882
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||    ||||  ||||||| | ||||| ||||||| | ||||| | || ||||||| |||||||||||| |||||| || ||||| |    
T  29006989 tgagtaaatagtcaatttcccccttgaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgtta 29006890  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  29006889 gtcaattt 29006882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 33305152 - 33305259
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||| | |||||| || ||||| |    
T  33305152 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccctctgaaatttcacaacgtta 33305251  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  33305252 gtcaattt 33305259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 39172611 - 39172504
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||  ||||| || ||||| |    
T  39172611 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctaaaatttcacaacgtta 39172512  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  39172511 gtcaattt 39172504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 39285470 - 39285388
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| ||||| || | |||||||    
T  39285470 gaaattgtaggtttcgtcaattacc-ccctgaaattaacaaaacttcaattacccccctgaaattgcataatgttaatcaattt 39285388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 47768098 - 47768205
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| | ||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  47768098 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 47768197  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  47768198 gtcaattt 47768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 53081915 - 53082019
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    |||||||||||||||   ||||| ||||||| | ||||||||||||||  ||| | | || ||||||| ||||||||||||  ||||| |||||||| |     
T  53081915 gagtaaatagtcaaattcccccctgaaattgtaagtttcgtcaattac--ccccgaaattaacaaaacttcaattacccccttaaattgcataacgttaa 53082012  T
Q  281 tcaattt 287  Q
    |||||||    
T  53082013 tcaattt 53082019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 11653912 - 11653802
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    ||||||||||| | |||  | ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  11653912 attgagtaaatgggcaattacccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcacaacg 11653813  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  11653812 ttaatcaattt 11653802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 14509169 - 14509279
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacc-ccccgaaattacataacg 276  Q
    |||||||||||||||||  | ||||||||||||| | |||||||||| |||| || |  | || |||||| |||||||||| ||| |||||| || ||||    
T  14509169 attgagtaaatagtcaattacccccccgaaattgtaagtttcgtcaactacccccttaaatttaacaaaatgtcaattaccaccctgaaattgcacaacg 14509268  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  14509269 ttaatcaattt 14509279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 17754953 - 17754843
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||  ||||||| | ||||||||||||| | ||||| | || ||||||  ||||||||||||| |||||| |||||||    
T  17754953 attgagtaaatagtcaattttccccatgaaattgtaagtttcgtcaattatccccctgaaattaacaaaaattcaattacccccctgaaattgcataacg 17754854  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  17754853 ttaatcaattt 17754843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 19056273 - 19056163
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||  ||||||| | ||||||||||||| | ||||| | || ||||||  ||||||||||||| |||||| |||||||    
T  19056273 attgagtaaatagtcaattttccccatgaaattgtaagtttcgtcaattatccccctgaaattaacaaaaattcaattacccccctgaaattgcataacg 19056174  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  19056173 ttaatcaattt 19056163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 38598890 - 38598972
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||| |||||||||||| || | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  38598890 aaattgtaagtttcatcaattacctccttgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 38598972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 4584018 - 4584107
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||| |  || | || ||||||||||||||||||||| |||||| || ||||| | |||||||    
T  4584018 ccccctgaaattgtaagtttcgtcaattacccctttgaaattaacaaaacgtcaattacccccctgaaattgcacaacgttaatcaattt 4584107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 23323225 - 23323314
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||  ||||||||||||| |||||| || ||||| |||||||||    
T  23323225 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaattacccccctgaaatttcacaacgttagtcaattt 23323314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 40783530 - 40783421
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    |||||||||||||||||    ||| | ||||||| | ||||| ||||||| |  |||| | || ||||||| |||||||||||| |||||| || |||||    
T  40783530 attgagtaaatagtcaatttcccctctgaaattgtaagtttcatcaattatcctcctgaaattaacaaaacttcaattaccccctgaaatttcacaacgt 40783431  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  40783430 tagtcaattt 40783421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 43353557 - 43353638
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| |||||||||||||||    |||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  43353557 aaattgtaggtttcgtcaattattctcctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 43353638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 43914817 - 43914708
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaatta-cctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    |||||||||||||||    ||| | ||||| | ||||||||||||||| |||||||| | || ||||||| |||||||||||||  ||||| ||||||||    
T  43914817 tgagtaaatagtcaatttcccctctgaaatcgtaggtttcgtcaattatcctccctgaaattaacaaaacttcaattacccccctaaaattgcataacgt 43914718  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  43914717 taatcaattt 43914708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 45258782 - 45258725
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||| | |||||||||||||||||| || | || ||||||||||||||| |||||    
T  45258782 gaaattgtaagtttcgtcaattacctccatgaaattaacaaaacgtcaattatccccc 45258725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 45969316 - 45969425
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | |||| ||||||||||  |||| | || ||||||| ||||||||||||  |||||| ||||||||    
T  45969316 ttgagtaaatagtcaatttcccccctgaaattgtaagttttgtcaattaccctcctgaaattaacaaaacttcaattacccccatgaaattgcataacgt 45969415  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  45969416 taatcaattt 45969425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 55154204 - 55154123
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||| ||||||| | ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  55154204 aaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 55154123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 3021061 - 3021141
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    ||||||||||||||    ||||| ||||||| |||||||||||||||||  | || | || ||||||| ||||||||||||    
T  3021061 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattaccctcttgaaattaacaaaacctcaattaccccc 3021141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 11652851 - 11652959
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccc-cccgaaattacataacgtc 278  Q
    ||||||||||| |||  | ||||| ||||||| | ||||||||||||||| ||| | | || ||||||| |||||||||| || |||||| || ||| ||    
T  11652851 tgagtaaatagacaattatccccctgaaattgtaagtttcgtcaattaccccccagaaattaacaaaacttcaattaccctcctgaaattgcacaacatc 11652950  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  11652951 aatcaattt 11652959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 24783245 - 24783173
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||||| | |||||||||||||||| |||| | || | ||||| |||||||||||| |||||| || |||||    
T  24783245 gaaattgtaagtttcgtcaattaccttcctgaaattaataaaacttcaattaccccctgaaattgcacaacgt 24783173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 35154769 - 35154661
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| | ||||||||||| ||||||  | |||||     
T  35154769 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaactttaattacccccctgaaattttacaacgtt 35154670  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  35154669 agtcaattt 35154661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 35236032 - 35235924
Alignment:
Q  180 tgagtaaatagtcaaaaaacccccc-gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    |||||||||||||||  | |||||  ||||||| | |||| |||||||||| ||||| | || ||||||| |||||||||||  |||||| || |||||     
T  35236032 tgagtaaatagtcaattaccccccttgaaattgtaagttttgtcaattacccccctgaaattaacaaaacttcaattaccccatgaaattgcacaacgtt 35235933  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  35235932 aatcaattt 35235924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 258
Target Start/End: Complemental strand, 36791853 - 36791773
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacc 258  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||    
T  36791853 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacc 36791773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 40009342 - 40009414
Alignment:
Q  215 gtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||||||||| | ||||| | || ||||||| || ||||||||| ||||||||| ||||| | |||||||    
T  40009342 gtttcgtcaattatccccctgaaattaacaaaacttcgattaccccctgaaattacacaacgttaatcaattt 40009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 40066679 - 40066603
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta 256  Q
    |||||||||||||||  | ||||| ||||||| | ||||||||||||||| || || | || ||||||| |||||||    
T  40066679 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaatta 40066603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 42856873 - 42856785
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||||||||| | || | ||||| |||||||||||  |||||| || ||||| | |||||||    
T  42856873 ccccctgaaattgtaagtttcatcaattacctccctgaaattaataaaacttcaattaccccatgaaatttcacaacgttaatcaattt 42856785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 45252553 - 45252466
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | |||||||||||||||| |||| | || ||||||| ||||||| || || |||||||||||| || |||||||||    
T  45252553 cccctgaaattgtaagtttcgtcaattacct-cctgaaattaacaaaacttcaattatcctcctgaaattacataatgttagtcaattt 45252466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 54493738 - 54493674
Alignment:
Q  197 aaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    |||||||  |||||| | ||||||||||||||||||||| | || |||||||  |||||||||||    
T  54493738 aaccccctaaaattgtaagtttcgtcaattacctccctgaaattaacaaaactgcaattaccccc 54493674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 326
Target Start/End: Complemental strand, 45745705 - 45745567
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctcc-ctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    |||||||||||||||||| |||| |||||||||| ||||| ||||||||| || | |||||| |||||||||||||||||||||||||||||||||||||    
T  45745705 tgagtaaatagtcaaaaaccccctcgaaattgcatgtttcatcaattaccccctccgcagttcacaaaacgtcaattaccccccgaaattacataacgtc 45745606  T
Q  279 agtcaatttcgtccttctgttaagttgttctgtgaaaggtgatgatgt 326  Q
     |||||||         |||||||||||||||||||||||||||||||    
T  45745605 ggtcaatt---------tgttaagttgttctgtgaaaggtgatgatgt 45745567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 45725269 - 45725384
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataacg 276  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||| ||||||     
T  45725269 attgagtaaatagtcaaaaaaccccccgaatttgcaggtttcgtcaattacccccctgcagttcacaaaacgtcaaatacccccccgaaattgcataaca 45725368  T
Q  277 tcagtcaatttcgtcc 292  Q
       |||||||||||||    
T  45725369 atggtcaatttcgtcc 45725384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 38170900 - 38171007
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||||||||| | || ||||||| ||||||||||||||||||| || |||||||    
T  38170900 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattaccccccgaaatttcacaacgtca 38170999  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  38171000 gtcaattt 38171007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 12231005 - 12231101
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataac 275  Q
    ||||||||||||||||  | ||||||||||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| ||||||    
T  12231005 ttgagtaaatagtcaattacccccccgaaattgtaggtttcgtcaattacc-ccctgaaattaacaaaacttcaattacccccctgaaattgcataac 12231101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 18851605 - 18851544
Alignment:
Q  21 gattgtttcttcttcttactatttgagaaagggaaaattgggatatctcaaggattttgatt 82  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  18851605 gattgcttcttcttcttacgatttgagaaagggaaaattgggatatcttagggattttgatt 18851544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 16082978 - 16083059
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    ||||||||||||||||   ||||| ||||||| ||||||| ||||||||||||||| | || ||||||| ||||||||||||    
T  16082978 tgagtaaatagtcaaattcccccctgaaattgtaggtttcatcaattacctccctgaaattaacaaaacttcaattaccccc 16083059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 19072270 - 19072183
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| |||||| |||||||||| ||||| | || ||||||| ||||||||||||||||||| |||||||| | |||||||    
T  19072270 ccccctgaaattgtaggttttgtcaattacc-ccctgaaattaacaaaacttcaattaccccccgaaattgcataacgttaatcaattt 19072183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 19071436 - 19071546
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||||||||||||| | | | |||| ||||||| ||||||||||||| |||||| |||||||    
T  19071436 attgagtaaatagtcaattttccccctgaaattgtaagtttcgtcaattacccctccgaagttaacaaaacttcaattacccccctgaaattgcataacg 19071535  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  19071536 ttaatcaattt 19071546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 30890212 - 30890318
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||    ||||| ||||||| | ||||| |||||||||||  || |||| ||||||| |||||||||||| |||||| || ||||| ||    
T  30890212 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctctttgaagttaacaaaacttcaattaccccctgaaatttcacaacgttag 30890311  T
Q  281 tcaattt 287  Q
    |||||||    
T  30890312 tcaattt 30890318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 33210281 - 33210363
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| |||||||||||||||||| |||| | || ||||||| |||||||||||  |||||| |||||||| | |||||||    
T  33210281 gaaattgtaggtttcgtcaattaccttcctgaaattaacaaaacttcaattaccccatgaaattgcataacgttaatcaattt 33210363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 34345217 - 34345327
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| |||||||||||||||||  |||| | || ||||||| ||||||||||| | |||||| |||||||    
T  34345217 attgagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattaccctcctgaaattaacaaaacttcaattacccctctgaaattgcataacg 34345316  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  34345317 ttaatcaattt 34345327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 21175986 - 21176067
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||| ||||||||||||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  21175986 aaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 21176067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 46101006 - 46100897
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| |||| ||||||| ||||||||||||  |||||| || |||||    
T  46101006 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaagttaacaaaacttcaattacccccttgaaatttcacaacgt 46100907  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  46100906 tagtcaattt 46100897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 19495966 - 19495860
Alignment:
Q  182 agtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcag 280  Q
    |||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| ||    
T  19495966 agtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccccagaaatttcacaacgttag 19495867  T
Q  281 tcaattt 287  Q
    |||||||    
T  19495866 tcaattt 19495860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 34959236 - 34959174
Alignment:
Q  198 accccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    |||||| ||||||| | ||||||||||||||||||||| | || ||||||| |||||||||||    
T  34959236 accccctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaattacccc 34959174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 36900862 - 36900756
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||  | ||||  ||||||| | |||||||||| |||  ||||| | || ||||||| |||||||||||| |||||| |||||||| |     
T  36900862 gagtaaatagtcaatcacccccttgaaattgtaagtttcgtcaactactcccctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaa 36900763  T
Q  281 tcaattt 287  Q
    |||||||    
T  36900762 tcaattt 36900756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 37731684 - 37731602
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| |||||||||||||||||  |||| | || ||||||  |||||||||||| |||||| |||||||| | |||||||    
T  37731684 gaaattgtaggtttcgtcaattaccctcctgaaattaacaaaatttcaattaccccctgaaattccataacgttaatcaattt 37731602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 29418238 - 29418129
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    |||||||||||| |||  | ||||| ||||||| | ||||||||||||||  ||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  29418238 ttgagtaaataggcaattatccccctgaaattgtaagtttcgtcaattactcccctgaaattaacaaaacttcaattacccccctgaaattgcacaacgt 29418139  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  29418138 taatcaattt 29418129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 3627935 - 3628043
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||  | || ||||||| ||||||||||||| |||||| || |||||     
T  3627935 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 3628034  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  3628035 agtcaattt 3628043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 5668242 - 5668326
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||    
T  5668242 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccc 5668326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 18851541 - 18851505
Alignment:
Q  98 attcaaaaatggaatgaaagagatataccgtgtacat 134  Q
    ||||||||||||||||||||||||||||| |||||||    
T  18851541 attcaaaaatggaatgaaagagatataccatgtacat 18851505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 24181873 - 24181981
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    ||||||||||||||||    ||| | ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||| || |||||| || |||||     
T  24181873 ttgagtaaatagtcaatttcccctctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacctcctgaaatttcacaacgtt 24181972  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  24181973 agtcaattt 24181981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 39628393 - 39628481
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  39628393 cccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcaaaacgttagtcaattt 39628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 41409693 - 41409585
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    |||||  |||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  41409693 tgagtaaatagtcaattttccccctaaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 41409594  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  41409593 agtcaattt 41409585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 45154908 - 45155016
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    | ||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  45154908 tgagtaaatagtcaatttcctccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 45155007  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  45155008 agtcaattt 45155016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 17272661 - 17272554
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||||| ||| | || ||||||| ||||||||||| | |||||| || ||||| |    
T  17272661 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctctctgaaattaacaaaacttcaattacccctctgaaatttcacaacgtta 17272562  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  17272561 gtcaattt 17272554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 38171773 - 38171666
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||| | |||||| || ||||| |    
T  38171773 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacctcaattacccctctgaaatttcacaacgtta 38171674  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  38171673 gtcaattt 38171666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 40667924 - 40668031
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| || |||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  40667924 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcgattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 40668023  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  40668024 gtcaattt 40668031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 46100165 - 46100232
Alignment:
Q  221 tcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||||| ||||| |||| ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  46100165 tcaattacccccctgaagttcacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 46100232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 116
Target Start/End: Original strand, 6429636 - 6429670
Alignment:
Q  82 ttttgattttgattagattcaaaaatggaatgaaa 116  Q
    |||||||||||||| ||||||||||||||||||||    
T  6429636 ttttgattttgatttgattcaaaaatggaatgaaa 6429670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 15652600 - 15652554
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaatta 227  Q
    ||||||||||||||| | ||| ||||||||||||||||| |||||||    
T  15652600 gagtaaatagtcaaatacccctccgaaattgcaggtttcatcaatta 15652554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 17775383 - 17775301
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | |||||||||||||||||  || | || ||||||| |||||||||||| |||||| || ||||| | |||||||    
T  17775383 gaaattgtaagtttcgtcaattacctctttgaaattaacaaaacttcaattaccccctgaaattgcacaacgttaatcaattt 17775301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 18031802 - 18031720
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  18031802 aaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 18031720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 28294240 - 28294326
Alignment:
Q  182 agtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaatt 268  Q
    |||||||||||||    ||||| ||||||| | ||||||||||||||| ||||  | || ||||||| |||||||||||| ||||||    
T  28294240 agtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaacttcaattaccccctgaaatt 28294326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 38184196 - 38184266
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataac 275  Q
    ||||||| ||||||||||||||||| |  || | || ||||||| |||||||||||| |||||| ||||||    
T  38184196 gaaattgtaggtttcgtcaattaccacattgaaattaacaaaacttcaattaccccctgaaattgcataac 38184266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 44388486 - 44388404
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||||||||||||| || || | || ||||||||||||||||||||| |||||| || ||||| | |||||||    
T  44388486 aaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattacccccctgaaattgcacaacgttaatcaattt 44388404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 14104011 - 14103927
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacc-tccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||||  | ||||  ||||||| | ||||||||||||||| |||||| | || ||||||| |||||||||||||    
T  14104011 attgagtaaatagtcaattatcccct-gaaattgtaagtttcgtcaattaccctccctgaaattaacaaaacttcaattacccccc 14103927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 14414028 - 14413944
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacc-tccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||||  | ||||  ||||||| | ||||||||||||||| |||||| | || ||||||| |||||||||||||    
T  14414028 attgagtaaatagtcaattatcccct-gaaattgtaagtttcgtcaattaccctccctgaaattaacaaaacttcaattacccccc 14413944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 21366266 - 21366347
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| || ||||||||||||||  |||| | || ||||||| |||||||||| | |||||| |||||||| | |||||||    
T  21366266 aaattgtagatttcgtcaattaccctcctgaaattaacaaaacttcaattaccctctgaaattgcataacgttaatcaattt 21366347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 35004215 - 35004296
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||| ||||||||  ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  35004215 aaattgaaagtttcatcaattactcccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 35004296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 35499451 - 35499342
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||  |  || | ||||||| | ||||||||||||||||| ||  | || |||||| |||||||||||||| |||||| || |||||    
T  35499451 ttgagtaaatagtcaattactcctctgaaattgtaagtttcgtcaattacctctctaaaattaacaaaatgtcaattacccccctgaaattgcacaacgt 35499352  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  35499351 taatcaattt 35499342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 42029303 - 42029222
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||| ||||||||| | ||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  42029303 aaattgtaagtttcatcaattacccctctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 42029222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 47170202 - 47170291
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||  ||||||||||||| |||||| || ||||| |||||||||    
T  47170202 ccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaattacccccctgaaatttcacaacgttagtcaattt 47170291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 26928070 - 26928146
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta 256  Q
    |||||||||||||||  | ||||| ||||||| | ||||||||||| ||||||||  | || ||||||| |||||||    
T  26928070 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaataacctccctaaaattaacaaaacttcaatta 26928146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 41080261 - 41080369
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||  ||||| | || ||||||| ||||||||||||| |||||| || ||| |     
T  41080261 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattactcccctgaaattaacaaaacttcaattacccccctgaaatttcacaacatt 41080360  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  41080361 agtcaattt 41080369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 9681105 - 9681018
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| ||||||||||||||||| ||||| | || ||||||| |||||||||||| |||||| |||||||| | |||||||    
T  9681105 cccctgaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattaccccctgaaattgcataacgttaatcaattt 9681018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 36724147 - 36724037
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    |||||  |||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| |||||||    
T  36724147 attgagtaaatagtcaatttcccccctaaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataacg 36724048  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  36724047 ttaatcaattt 36724037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 41115918 - 41115810
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    ||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||||||||| || |||||     
T  41115918 ttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacctcaattaccccccgaaatttcacaacgtt 41115819  T
Q  279 agtcaattt 287  Q
     ||||||||    
T  41115818 ggtcaattt 41115810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 35894065 - 35894172
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||||||||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  35894065 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 35894164  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  35894165 gtcaattt 35894172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 43506115 - 43506008
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    |||||  |||||| ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| |||||||| |    
T  43506115 gagtaaatagtcaatttcccccctaaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcataacgtta 43506016  T
Q  280 gtcaattt 287  Q
     |||||||    
T  43506015 atcaattt 43506008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 48721612 - 48721507
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||||| || || | || |||||||||||||||||||| |||||| || ||||| |     
T  48721612 gagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattaccccctgaaattgcacaacgttaa 48721514  T
Q  281 tcaattt 287  Q
    |||||||    
T  48721513 tcaattt 48721507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 49596195 - 49596113
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||    ||||  ||||||| ||||||||||||||||||||||| | || ||||||| |||||||||||||    
T  49596195 tgagtaaatagtcaatttcccccttgaaattgtaggtttcgtcaattacctccctgaaattaacaaaacttcaattacccccc 49596113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 11201899 - 11202004
Alignment:
Q  182 agtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagt 281  Q
    |||||||||||||  | ||||| ||||||| | ||||||||||||||| || || | || ||||||| |||||||||||| |||||| || ||||| | |    
T  11201899 agtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacttcaattaccccctgaaattgcacaacgttaat 11201998  T
Q  282 caattt 287  Q
    ||||||    
T  11201999 caattt 11202004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 16834362 - 16834470
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    |||||||||||||||||  | ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||  |||||| || |||||    
T  16834362 attgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacc-ccctgaaattaacaaaacttcaattaccccatgaaattgcacaacgt 16834460  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  16834461 taatcaattt 16834470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 27234250 - 27234339
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||||||||| | || ||||||| ||||||||||||| |||||| || ||||| | |||||||    
T  27234250 ccccctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttaatcaattt 27234339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 37612829 - 37612938
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  37612829 ttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 37612928  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  37612929 tagtcaattt 37612938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 38623922 - 38623833
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| |||||||||||||||||  |||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  38623922 ccccctgaaattgtaggtttcgtcaattaccctcctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 38623833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 20898513 - 20898621
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  20898513 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 20898612  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  20898613 agtcaattt 20898621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 20899393 - 20899285
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  20899393 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 20899294  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  20899293 agtcaattt 20899285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 24250408 - 24250488
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||||| || || | || ||||||||||||||||||||    
T  24250408 gagtaaatagtcaattatccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattaccccc 24250488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 35393256 - 35393168
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||||||||||||| | ||| | || ||||||| ||||||||||||  ||||| |||||||| |||||||||    
T  35393256 ccccctgaaattgtaagtttcgtcaattacccctctgaaattaacaaaacttcaattaccccctaaaattgcataacgttagtcaattt 35393168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 46294434 - 46294518
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||||  | ||||| ||||||| | ||||||||||||||| ||||  | || |||||| ||||||||||||||    
T  46294434 attgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccctaaaattaacaaaatgtcaattacccccc 46294518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 11992840 - 11992757
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||||||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  11992840 gaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 11992757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 13242194 - 13242301
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| |||||||||  |||| | || ||||||| ||||||||||||| |||||| |||||||| |    
T  13242194 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatttcataacgtta 13242293  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  13242294 gtcaattt 13242301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 24982644 - 24982751
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || || || |    
T  24982644 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaatgtta 24982743  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  24982744 gtcaattt 24982751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 29674315 - 29674402
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||| |||||||||||| || | || ||||||| |||||||||| | |||||| |||||||| |||||||||    
T  29674315 cccctgaaattgtaagtttcatcaattacctccttgaaattaacaaaacttcaattaccctctgaaatttcataacgttagtcaattt 29674402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 6783127 - 6783232
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||  | ||||| ||||||| | ||||||||||||||| ||||  | || |||||| ||||||||||||| |||||| || ||||| |    
T  6783127 tgagtaaatagtcaattacccccctgaaattgtatgtttcgtcaattacc-ccctaaaattaacaaaatgtcaattaccccctgaaattgcacaacgtta 6783225  T
Q  280 gtcaatt 286  Q
     ||||||    
T  6783226 atcaatt 6783232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 8384208 - 8384126
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  8384208 gaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 8384126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 29330170 - 29330061
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||| | ||||| ||||||||| || || | || ||||||| ||||||||||||| |||||| || |||||    
T  29330170 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccttgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 29330071  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  29330070 tagtcaattt 29330061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 45216772 - 45216857
Alignment:
Q  203 ccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||||| | |||||||||||||||  |||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  45216772 ccgaaattgtaagtttcgtcaattaccctcctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 45216857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 48804035 - 48803926
Alignment:
Q  180 tgagtaaatagtcaaaaaacccccc-gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    |||||||||||||||  | |||| | ||||||| | |||||||||||| |||||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  48804035 tgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaatttcctccctgaaattaacaaaacatcaattacccccctgaaattgcacaacgt 48803936  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  48803935 taatcaattt 48803926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 3898539 - 3898431
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || || ||     
T  3898539 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaatgtt 3898440  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  3898439 agtcaattt 3898431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 32537289 - 32537202
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||||||||||||| ||||| | || | ||||| ||||||||||||| |||||| |||||||| |||||||||    
T  32537289 cccctgaaattgtaagtttcgtcaattacc-ccctgaaattaataaaacttcaattacccccctgaaattgcataacgttagtcaattt 32537202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 6783973 - 6783890
Alignment:
Q  185 aaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaatt 268  Q
    ||||||||||  | ||||| ||||||| | ||||||||||||| | || || | || |||||||||||||||||||| ||||||    
T  6783973 aaatagtcaattatccccctgaaattgtaagtttcgtcaattatccccttgaaattaacaaaacgtcaattaccccctgaaatt 6783890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 8896920 - 8897027
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataacgtca 279  Q
    ||||||||||||||  | || ||  |||||| | ||||||||||||||| || || | || ||||||||||||||| ||||| ||||||||| ||||| |    
T  8896920 gagtaaatagtcaattaccctcctaaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattatccccctgaaattacacaacgtta 8897019  T
Q  280 gtcaattt 287  Q
     |||||||    
T  8897020 atcaattt 8897027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 286
Target Start/End: Original strand, 12770084 - 12770171
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaatt 286  Q
    |||| ||||||| | ||||||||||||||| || || | || ||||||||||||||||||||| |||||| || ||||| | ||||||    
T  12770084 cccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattacccccctgaaattgcacaacgttaatcaatt 12770171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 37613709 - 37613602
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||| | || || | || ||||||| ||||||||||||| |||||| |||||||| |    
T  37613709 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccttgaaattaacaaaacttcaattacccccctgaaatttcataacgtta 37613610  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  37613609 gtcaattt 37613602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 44744719 - 44744625
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataac 275  Q
    ||||||||||||||    ||||| ||||||  ||||||||||||||||| ||||| | || ||||||| ||||||||||||| |||||| ||||||    
T  44744719 gagtaaatagtcaatttcccccctgaaattataggtttcgtcaattacc-ccctgaaattaacaaaacttcaattacccccctgaaattgcataac 44744625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 51619408 - 51619515
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtca 279  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||  |||||||||||| |||||| || || || |    
T  51619408 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaatttcaattaccccctgaaatttcacaatgtta 51619507  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  51619508 gtcaattt 51619515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 8741723 - 8741821
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    ||||||||||||||||    ||||  ||||||| | ||||||||||||||| | ||| | || ||||||| ||||||||||||| |||||| |||||||    
T  8741723 ttgagtaaatagtcaatttcccccttgaaattgtaagtttcgtcaattacccctctgaaattaacaaaacttcaattacccccctgaaattgcataacg 8741821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 24481961 - 24482031
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaatta-ccccccgaaattacataa 274  Q
    ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||| ||||| |||||| |||||    
T  24481961 gaaattgtaggtttcgtcaattacccccctgaaattaacaaaacttcaattatccccctgaaattgcataa 24482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 25227429 - 25227511
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| |||||||||  |||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  25227429 gaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 25227511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 25859689 - 25859607
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || |||||  ||||||||    
T  25859689 gaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttcgtcaattt 25859607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 31196905 - 31196795
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | |||||  |||||||| ||||| | || ||||||| ||||||||||||| |||||| || || |    
T  31196905 attgagtaaatagtcaattttccccctgaaattgtaagtttcaacaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaatg 31196806  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  31196805 ttagtcaattt 31196795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 31435613 - 31435507
Alignment:
Q  182 agtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcag 280  Q
    |||||||||||||    ||||| ||||||| | ||||| ||||||| | ||||| | || ||||||| ||||||||||||| |||||| || ||||| ||    
T  31435613 agtaaatagtcaatttcccccctgaaattgtaagtttcatcaattatccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttag 31435514  T
Q  281 tcaattt 287  Q
    |||||||    
T  31435513 tcaattt 31435507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 43680363 - 43680445
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||    
T  43680363 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccc 43680445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 44431180 - 44431262
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaatta-cctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||| || ||||| | || ||||||| |||||||||||||    
T  44431180 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattaccccccctggaattaacaaaacttcaattacccccc 44431262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 9680255 - 9680336
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||    ||||| ||||||  | |||||||||||||| |||||| | || ||||||| |||||||||||||    
T  9680255 gagtaaatagtcaatttcccccctgaaattataagtttcgtcaattacatccctgaaattaacaaaacttcaattacccccc 9680336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 42413126 - 42413183
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||||    
T  42413126 gaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccc 42413183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 43759577 - 43759657
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    |||||| | ||||||||||||||| ||||| | || |||||||||||| ||||||| |||||| || ||||| | |||||||    
T  43759577 aaattgtaagtttcgtcaattacccccctgaaattaacaaaacgtcaa-taccccctgaaattgcacaacgttaatcaattt 43759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 52869657 - 52869738
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    |||||||||||||||  | ||||| ||||||| | ||||||||||||||| || |  | || |||||| |||||||||||||    
T  52869657 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaattaccccc 52869738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 52869926 - 52869987
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    ||||| ||||||| | ||||||||||||||| || || | || |||||||||||||||||||    
T  52869926 ccccctgaaattgtaagtttcgtcaattacccccttgaaattaacaaaacgtcaattacccc 52869987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 9033577 - 9033661
Alignment:
Q  203 ccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||||| | ||||| ||||||| |||| || | || ||||||| |||||||||||  |||||| |||||||| | |||||||    
T  9033577 ccgaaattgtaagtttcatcaattatctccatgaaattaacaaaacttcaattaccccatgaaattgcataacgttaatcaattt 9033661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 42432133 - 42432189
Alignment:
Q  204 cgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    |||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||    
T  42432133 cgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccc 42432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 44156454 - 44156536
Alignment:
Q  206 aaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc--gaaattacataacgtcagtcaattt 287  Q
    |||||| ||||||||| ||||||| ||||| | || ||||||| |||||||||||||  |||||| |||||||| | |||||||    
T  44156454 aaattgtaggtttcgttaattacc-ccctgaaattaacaaaacttcaattaccccccctgaaattgcataacgttaatcaattt 44156536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 45507888 - 45507996
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    ||||||||||||||||    || || ||||||| | ||||| ||||||||  ||||| | || ||||||| |||||||||||| ||||||  | |||||     
T  45507888 ttgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaattactcccctgaaattaacaaaacttcaattaccccctgaaattttacaacgtt 45507987  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  45507988 agtcaattt 45507996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 49596002 - 49596054
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattac 257  Q
    ||||||| |||||||||||||||||||| || | || ||||||| ||||||||    
T  49596002 gaaattgtaggtttcgtcaattacctccttgaaattaacaaaacttcaattac 49596054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 42614 - 42518
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataac 275  Q
    ||||||||||||||||    ||||| ||||||| |||||||||||||||||  |||| | || ||||||| ||||||||||| ||||||| ||||||    
T  42614 ttgagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacccacctgaaattaacaaaacttcaattacccctcgaaattgcataac 42518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 5439153 - 5439045
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||||||||||||||||||| | || ||||||| ||||||||||||  |||||| ||||||||     
T  5439153 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaattacctccctgaaattaacaaaacttcaattacccccttgaaattgcataacgtt 5439054  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  5439053 aatcaattt 5439045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 9707866 - 9707974
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||  | ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  9707866 tgagtaaatagtcaattacccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcacaacgtt 9707965  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  9707966 aatcaattt 9707974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 22063901 - 22064008
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||| ||||  | ||||||||||||| | ||||||||||||| | || || | || ||||||||||||||||||||| |||||| || ||||| |    
T  22063901 gagtaaataatcaattatccccccgaaattgtaagtttcgtcaattatccccttgaaattaacaaaacgtcaattacccccctgaaattgcacaacgtta 22064000  T
Q  280 gtcaattt 287  Q
     |||||||    
T  22064001 atcaattt 22064008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 28149862 - 28149968
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| ||||||||||||||||| ||||| | || ||||||  ||||||||||||| |||||| |||||||| |    
T  28149862 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacc-ccctgaaattaacaaaatttcaattacccccctgaaattgcataacgtta 28149960  T
Q  280 gtcaattt 287  Q
     |||||||    
T  28149961 atcaattt 28149968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 25992670 - 25992597
Alignment:
Q  215 gtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||||||||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  25992670 gtttcatcaattacctccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 25992597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 41286276 - 41286357
Alignment:
Q  182 agtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacct-ccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||||||    ||||| ||||||| |||||||||||||||||| ||||| | || ||||||| |||||||||||||    
T  41286276 agtaaatagtcaattttccccctgaaattgtaggtttcgtcaattacctcccctgaaattaacaaaacttcaattacccccc 41286357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 44257984 - 44258093
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||     |||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||    
T  44257984 ttgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 44258083  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  44258084 tagtcaattt 44258093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 7338928 - 7338868
Alignment:
Q  202 cccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||||    
T  7338928 cccgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccc 7338868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 16057270 - 16057378
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||| | ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  16057270 tgagtaaatagtcaattttccctctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 16057369  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  16057370 agtcaattt 16057378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 25774816 - 25774904
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  25774816 cccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacctcaattacccccctgaaatttcacaacgttagtcaattt 25774904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 28150984 - 28150896
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||||||||||||||| | | | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  28150984 cccctgaaattgtaagtttcgtcaattacctctccgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 28150896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 28637564 - 28637457
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| |||| |||||||||||| ||||||| ||||| | || ||||||| |||||||||||||  ||||| ||||||||     
T  28637564 tgagtaaatagtcaatttcccccctgaaactgcaggtttcgttaattacc-ccctgaaattaacaaaacttcaattacccccctcaaattgcataacgtt 28637466  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  28637465 aatcaattt 28637457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 3364128 - 3364065
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaatt 268  Q
    ||||||| | |||||||||||||||| |||| | || ||||||| |||||||||||| ||||||    
T  3364128 gaaattgtaagtttcgtcaattaccttcctgaaattaacaaaacttcaattaccccctgaaatt 3364065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 15829925 - 15830004
Alignment:
Q  198 accccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    |||||| ||||||| | ||||||||||||||| ||||| | || ||||||| |||| ||||||| |||||| || |||||    
T  15829925 accccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaactaccccctgaaattgcacaacgt 15830004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 18059499 - 18059582
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||| | ||||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  18059499 gaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 18059582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 19222864 - 19222971
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||| | ||||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  19222864 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaaccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 19222963  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  19222964 gtcaattt 19222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 41727214 - 41727107
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| ||| |||| |    
T  41727214 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattgcatgacgtta 41727115  T
Q  280 gtcaattt 287  Q
     |||||||    
T  41727114 atcaattt 41727107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 45159603 - 45159686
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattac-cccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| || || | || ||||||| |||||||| |||| |||||| |||||||| | |||||||    
T  45159603 gaaattgtaggtttcgtcaattacccccttgaaattaacaaaacttcaattactcccctgaaattgcataacgttaatcaattt 45159686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 122332 - 122250
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || || || |||||||||    
T  122332 gaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatttcacaatgttagtcaattt 122250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 6167034 - 6166952
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||  |||||| || ||||| |||||||||    
T  6167034 gaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccttgaaatttcacaacgttagtcaattt 6166952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 17815459 - 17815569
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||  | ||||| ||||||| | ||||||||||||||  |  || | || |||||| |||||||||||||| |||||| || ||||    
T  17815459 attgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattactcctttgaaattaacaaaatgtcaattacccccctgaaattgcacaacg 17815558  T
Q  277 tcagtcaattt 287  Q
    | | |||||||    
T  17815559 ttaatcaattt 17815569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 15831038 - 15830958
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||  | ||||| ||||||| | ||||||||||||| | ||||| | || ||||||| |||||||||||||    
T  15831038 gagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaattatccccctgaaattaacaaaacttcaattacccccc 15830958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 17816327 - 17816219
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||  | ||||| ||||||| | ||||||||||||||| || |  | || |||||| |||||||||||||| |||||| || |||||    
T  17816327 ttgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaattacccccttaaaattaacaaaatgtcaattacccccctgaaattgcacaacgt 17816229  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  17816228 taatcaattt 17816219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 43130151 - 43130071
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||    ||||| ||||||| ||||||||||||||||| ||||| | || ||||||| ||||||| |||||    
T  43130151 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacc-ccctgaaattaacaaaacttcaattatccccc 43130071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 5440093 - 5440181
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaatt 268  Q
    ||||||||||| |||  |  |||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| ||||||    
T  5440093 tgagtaaatagacaattattcccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccctgaaatt 5440181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 6166201 - 6166288
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||  ||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||||| |||||||||    
T  6166201 ccccctgaaattgtaagttttatcaattacc-ccctgaaattaacaaaacttcaattaccccctgaaatttcacaacgttagtcaattt 6166288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 9709044 - 9708972
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||||| | |||||||||||||||||  || | || ||||||| |||||||||||| |||||| || |||||    
T  9709044 gaaattgtaagtttcgtcaattacctctttgaaattaacaaaacttcaattaccccctgaaattgcacaacgt 9708972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 19223743 - 19223663
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||    
T  19223743 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccc 19223663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 26367326 - 26367434
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctc-cctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    |||||||||||||||    |||||  |||||| | ||||| ||||||||| | |||| | || ||||||| |||||||||||| |||||| || |||||     
T  26367326 tgagtaaatagtcaatttccccccttaaattgtaagtttcatcaattacccctcctgaaattaacaaaacttcaattaccccctgaaatttcacaacgtt 26367425  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  26367426 agtcaattt 26367434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 35892331 - 35892423
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattac 270  Q
    |||||||||||||||||    |||||  |||||| | ||||| ||||||||| ||||| | || ||||||| ||||||| |||| ||||||||    
T  35892331 attgagtaaatagtcaatttcccccctaaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattatcccctgaaattac 35892423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 37225309 - 37225221
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||| ||||||||  ||||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  37225309 cccctgaaattgtaagtttcatcaattactcccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 37225221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 40598418 - 40598526
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccc-tgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||| || | || ||||||| |||||||||||| |||||| || || ||     
T  40598418 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaccccccctgaaattaacaaaacttcaattaccccctgaaatttcacaatgtt 40598517  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  40598518 agtcaattt 40598526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 42793890 - 42793810
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||    
T  42793890 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccc 42793810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 45629918 - 45630026
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    |||||  |||||| | ||||| ||||||||| ||||  | || ||||||| ||||||||||||| |||||| || |||||     
T  45629918 tgagtaaatagtcaatttcccccctaaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 45630017  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  45630018 agtcaattt 45630026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 10124 - 10234
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||     |||| ||||||| | ||||| ||||||||||||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  10124 attgagtaaatagtcaatttctcccctgaaattgtaagtttcatcaattacctccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 10223  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  10224 ttagtcaattt 10234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 8140 - 8031
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    ||||||||||||||||    ||||| ||||||||| ||||| |||||||||  |||| | || ||||||| ||||||||||||| |||||| || |||||    
T  8140 ttgagtaaatagtcaatttcccccctgaaattgcaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatttcacaacgt 8041  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  8040 tagtcaattt 8031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 18739413 - 18739306
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| ||||||||     
T  18739413 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacc-ccctgaaattaacaaaacttcaattaccccccagaaatttcataacgtt 18739315  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  18739314 agtcaattt 18739306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 16894434 - 16894517
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| | ||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  16894434 gaaattgtaggtttcgtcaattacccctctgaaattaacaaaacttcaattacccccctgaaattgcataacgttaatcaattt 16894517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 22822284 - 22822177
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| |||| ||||||| ||||||||||||  |||||| || ||||| |    
T  22822284 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaagttaacaaaacttcaattacccccttgaaatttcacaacgtta 22822185  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  22822184 gtcaattt 22822177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 29723096 - 29723179
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc-cgaaattacataacgtcagtcaattt 287  Q
    ||||||| |||||||||||||||||||||||   || ||||||| ||||||||||||  |||||| |||||||| | |||||||    
T  29723096 gaaattgtaggtttcgtcaattacctccctgatattaacaaaacttcaattacccccttgaaattgcataacgttaatcaattt 29723179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 2318569 - 2318460
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  2318569 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacc-ccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 2318471  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  2318470 ttagtcaattt 2318460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 8743178 - 8743069
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  8743178 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacc-ccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 8743080  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  8743079 ttagtcaattt 8743069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 14394669 - 14394779
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| ||||||  | ||||    
T  14394669 attgagtaaatagtcaattttccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaattttacaacg 14394768  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  14394769 ttagtcaattt 14394779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 15191811 - 15191892
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| ||||| | || ||||| | |||||||||||| |||||| |||||||| | |||||||    
T  15191811 gaaattgtaggtttcgtcaattacc-ccctgaaattaacaaatcttcaattaccccctgaaattgcataacgttaatcaattt 15191892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 15468740 - 15468659
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| ||||||||||||||||| ||||| | || ||||| | |||||||||||| |||||| |||||||| | |||||||    
T  15468740 gaaattgtaggtttcgtcaattacc-ccctgaaattaacaaatcttcaattaccccctgaaattgcataacgttaatcaattt 15468659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 15968521 - 15968629
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtc 278  Q
    |||||||||||||||    ||||  ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || |||||     
T  15968521 tgagtaaatagtcaatttccccctggaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtt 15968620  T
Q  279 agtcaattt 287  Q
    |||||||||    
T  15968621 agtcaattt 15968629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 8812045 - 8812152
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||  | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  8812045 gagtaaatagtcaattttccccctgaaattataagtttcatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 8812144  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  8812145 gtcaattt 8812152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 8940244 - 8940137
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc-ccgaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||| | |||||| || ||||| |    
T  8940244 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccctctgaaatttcacaacgtta 8940145  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  8940144 gtcaattt 8940137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 15127801 - 15127695
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  15127801 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacc-ccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 15127703  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  15127702 gtcaattt 15127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 22504247 - 22504330
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||||||||||| | ||  |||||| ||||||||||||| |||||| || ||||| | |||||||    
T  22504247 gaaattgtaagtttcgtcaattacctccctgaaattatcaaaacttcaattacccccctgaaatttcacaacgttaatcaattt 22504330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 287
Target Start/End: Complemental strand, 26610516 - 26610427
Alignment:
Q  200 cccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc--gaaattacataacgtcagtcaattt 287  Q
    |||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||  |||||| || ||||| |||||||||    
T  26610516 cccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccccctgaaatttcacaacgttagtcaattt 26610427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 5417476 - 5417565
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| |||||||||  |||| | || ||||||| ||||||||||||| |||||| || ||||| |||||||||    
T  5417476 ccccctgaaattgtaagtttcatcaattaccctcctgaaattaacaaaacttcaattacccccctgaaatttcacaacgttagtcaattt 5417565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 20856710 - 20856819
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||||||||||||| |    ||||| ||||||| | ||||| ||||||| |  |||| | || ||||||| |||||||||||| |||||| || |||||    
T  20856710 attgagtaaatagtccattttccccctgaaattgtaagtttcatcaattatcctcctgaaattaacaaaacttcaattaccccctgaaatttcacaacgt 20856809  T
Q  278 cagtcaattt 287  Q
     |||||||||    
T  20856810 tagtcaattt 20856819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 23075437 - 23075328
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgt 277  Q
    |||||||||||| |||  | |||||  |||||| | ||||||||||||||| ||||| | || | ||||| ||||||||||||| |||||| || |||||    
T  23075437 ttgagtaaataggcaattacccccctaaaattgtaagtttcgtcaattacccccctgaaattaaaaaaacttcaattacccccctgaaattgcacaacgt 23075338  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  23075337 taatcaattt 23075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 25404075 - 25404156
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||    
T  25404075 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccc 25404156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 32628761 - 32628680
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||||    
T  32628761 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattacccccc 32628680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 287
Target Start/End: Complemental strand, 13209937 - 13209850
Alignment:
Q  199 ccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| |||||||||||| |||||| || ||| | |||||||||    
T  13209937 ccccctgaaattgtaagtttcatcaattacc-ccctgaaattaacaaaacttcaattaccccctgaaatttcacaacattagtcaattt 13209850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 41349 - 41432
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtcagtcaattt 287  Q
    ||||||| | |||||||||||||| |||||| | || ||||||| ||||||||||||| |||||| |||||||| | |||||||    
T  41349 gaaattgtaagtttcgtcaattacttccctgaaattaacaaaacttcaattacccccctgaaatttcataacgttaatcaattt 41432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 43501 - 43420
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc 262  Q
    |||||||||| |||  | ||||| ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||||    
T  43501 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattacccccc 43420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 130904 - 130986
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcagtcaattt 287  Q
    ||||||| | ||||||||||||||| ||||| | || ||||||| |||||||||||  |||||| |||||||| | |||||||    
T  130904 gaaattgtaagtttcgtcaattacccccctgaaattaacaaaacttcaattaccccatgaaattgcataacgttaatcaattt 130986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 13658 - 13586
Alignment:
Q  205 gaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    ||||||| | |||| |||||||||||||||| | || ||||||||||||||| |||| |||||| || |||||    
T  13658 gaaattgtaagttttgtcaattacctccctgaaattaacaaaacgtcaattatcccctgaaattgcacaacgt 13586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 95096 - 94989
Alignment:
Q  179 ttgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtc 278  Q
    ||||||||||||||||  | ||||| ||||||| | ||||||||||||||| ||||  | || |||||| ||||||||||||| |||| | || |||||     
T  95096 ttgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaattacc-ccctaaaattaacaaaatgtcaattaccccctgaaaatgcacaacgtt 94998  T
Q  279 agtcaattt 287  Q
    | |||||||    
T  94997 aatcaattt 94989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 94243 - 94352
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgt 277  Q
    |||||||||||||||||  | ||||| ||||||| | ||||| ||||||| |  | || | || |||||||||||||||||| | |||||| || |||||    
T  94243 attgagtaaatagtcaattatccccctgaaattgtaagtttcatcaattatcctcttgaaattaacaaaacgtcaattaccctctgaaattgcacaacgt 94342  T
Q  278 cagtcaattt 287  Q
     | |||||||    
T  94343 taatcaattt 94352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 5183 - 5290
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacgtca 279  Q
    ||||||||||||||    ||||| ||||||| | ||||| ||||||| | ||||| | || ||||||| ||||||||||||| |||||| || ||||| |    
T  5183 gagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattaaccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacgtta 5282  T
Q  280 gtcaattt 287  Q
    ||||||||    
T  5283 gtcaattt 5290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 185594 - 185677
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccc 261  Q
    |||||||||||||||||    ||||| ||||||| | ||||| ||||||||| ||||| | || ||||||| ||||||||||||    
T  185594 attgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaattacccccctgaaattaacaaaacttcaattaccccc 185677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 1821 - 1719
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattaccccccgaaattacataacgtcag 280  Q
    ||||||||||||||    ||||| ||||||| | ||||  ||||||||  ||||| |||| ||||||| |||||||||||| |||||| || ||||| ||    
T  1821 gagtaaatagtcaatttcccccctgaaattgtaagttttatcaattactcccctgaagttcacaaaacttcaattaccccctgaaatttcacaacgttag 1722  T
Q  281 tca 283  Q
    |||    
T  1721 tca 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 7078 - 7188
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    ||||| ||||||| | ||||  ||||||||| ||||| | || ||||||| ||||||||||||| |||||| || ||||    
T  7078 attgagtaaatagtcaatttcccccctgaaattgtaagttttatcaattacccccctgaaattaacaaaacttcaattacccccctgaaatttcacaacg 7177  T
Q  277 tcagtcaattt 287  Q
    |  ||||||||    
T  7178 ttggtcaattt 7188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 260
Target Start/End: Original strand, 66584 - 66664
Alignment:
Q  180 tgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccc 260  Q
    |||||||||||||||  |  |||| ||||||| | |||||||||||| || || || | || |||||||||||||||||||    
T  66584 tgagtaaatagtcaattacacccctgaaattgtaagtttcgtcaattgcccccttgaaattaacaaaacgtcaattacccc 66664  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 12288 - 12398
Alignment:
Q  178 attgagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccctgcagtttacaaaacgtcaattacccccc-gaaattacataacg 276  Q
    |||||||||||||||||    || || ||||||| | ||||| ||||||||| ||||  | || ||||||| ||||||||||||| |||||| || ||||    
T  12288 attgagtaaatagtcaatttccctcctgaaattgtaagtttcatcaattacccccctaaaattaacaaaacttcaattacccccctgaaatttcacaacg 12387  T
Q  277 tcagtcaattt 287  Q
    | |||||||||    
T  12388 ttagtcaattt 12398  T

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Target: scaffold0672 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 6418 - 6365
Alignment:
Q  181 gagtaaatagtcaaaaaaccccccgaaattgcaggtttcgtcaattacctccct 234  Q
    ||||||||||||||    ||||| ||||||| ||||||||||||||||||||||    
T  6418 gagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaattacctccct 6365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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