View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1640_low_23 (Length: 265)
Name: NF1640_low_23
Description: NF1640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1640_low_23 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 96 - 265
Target Start/End: Original strand, 32377924 - 32378090
Alignment:
| Q |
96 |
cgtttctttatgtggacacnnnnnnntcatgggaaaaaatgttggcgggttatttggtaaagaagtggtattgggatcaatgcaatttttctatggtttc |
195 |
Q |
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| T |
32377924 |
cgtttctttatgtggacacaaaaaaatcatgggaaaaaatgttggcgggttatttggtaaagaagtggtattgggatcaatgcaatttttctatggtttc |
32378023 |
T |
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| Q |
196 |
aaatcttcaaaggaataactcaataaaaaatatatatatttaaaggaagttttgttaggtgtgagtccgt |
265 |
Q |
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|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
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| T |
32378024 |
aaatcttcaaaggaataactcaataaaaaa---aaatatttaaaggaagttttgttaggtgtgagtccgt |
32378090 |
T |
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