View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1640_low_29 (Length: 239)

Name: NF1640_low_29
Description: NF1640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1640_low_29
NF1640_low_29
[»] chr6 (23 HSPs)
chr6 (1-224)||(407578-407801)
chr6 (119-224)||(10685213-10685317)
chr6 (119-224)||(32820259-32820366)
chr6 (121-224)||(4119591-4119694)
chr6 (138-224)||(21153932-21154018)
chr6 (117-224)||(16855689-16855796)
chr6 (110-160)||(28237103-28237153)
chr6 (110-160)||(32245297-32245347)
chr6 (110-158)||(32541978-32542026)
chr6 (110-160)||(10839387-10839437)
chr6 (110-160)||(11261491-11261541)
chr6 (110-160)||(18497648-18497698)
chr6 (110-160)||(18804382-18804432)
chr6 (110-160)||(28663091-28663141)
chr6 (119-160)||(7268888-7268929)
chr6 (113-158)||(34921294-34921339)
chr6 (110-170)||(3659717-3659777)
chr6 (110-158)||(8677718-8677766)
chr6 (110-158)||(18248403-18248451)
chr6 (110-158)||(19247661-19247709)
chr6 (110-158)||(22084509-22084557)
chr6 (110-158)||(25023219-25023267)
chr6 (110-158)||(32400546-32400594)
[»] chr4 (65 HSPs)
chr4 (110-224)||(16946469-16946583)
chr4 (89-160)||(1828950-1829021)
chr4 (90-160)||(25811110-25811180)
chr4 (110-224)||(34373186-34373299)
chr4 (110-219)||(34100890-34100998)
chr4 (110-163)||(52960421-52960474)
chr4 (110-158)||(33180639-33180687)
chr4 (119-197)||(2472618-2472696)
chr4 (110-160)||(3613819-3613869)
chr4 (110-160)||(27553391-27553441)
chr4 (110-160)||(48480331-48480381)
chr4 (111-183)||(35884512-35884585)
chr4 (90-158)||(9366234-9366302)
chr4 (90-158)||(13428227-13428295)
chr4 (90-158)||(14254770-14254838)
chr4 (134-207)||(32335231-32335306)
chr4 (110-158)||(42512067-42512115)
chr4 (119-183)||(47405199-47405263)
chr4 (90-158)||(49332811-49332879)
chr4 (110-165)||(39652565-39652620)
chr4 (110-160)||(4894407-4894457)
chr4 (110-160)||(9730341-9730391)
chr4 (110-160)||(10397746-10397796)
chr4 (110-160)||(15169733-15169783)
chr4 (110-160)||(23624131-23624181)
chr4 (110-160)||(28426698-28426748)
chr4 (110-160)||(30188471-30188521)
chr4 (110-160)||(38704749-38704799)
chr4 (110-160)||(39910678-39910728)
chr4 (90-160)||(42899395-42899465)
chr4 (110-160)||(47628840-47628890)
chr4 (110-160)||(49013595-49013645)
chr4 (110-160)||(56360090-56360140)
chr4 (119-160)||(4825047-4825088)
chr4 (119-160)||(5092629-5092670)
chr4 (110-159)||(12591525-12591574)
chr4 (119-160)||(14488408-14488449)
chr4 (103-156)||(19689818-19689871)
chr4 (103-156)||(19700403-19700456)
chr4 (110-155)||(22786848-22786893)
chr4 (110-159)||(26902965-26903014)
chr4 (138-183)||(29384682-29384727)
chr4 (119-160)||(32801104-32801145)
chr4 (90-155)||(39150973-39151038)
chr4 (110-158)||(1620818-1620866)
chr4 (110-158)||(5511765-5511813)
chr4 (110-158)||(5519661-5519709)
chr4 (92-160)||(5985737-5985805)
chr4 (110-158)||(6212940-6212988)
chr4 (110-158)||(11493000-11493048)
chr4 (110-158)||(12294120-12294168)
chr4 (177-225)||(12854469-12854517)
chr4 (123-183)||(13403778-13403838)
chr4 (90-158)||(16959310-16959378)
chr4 (112-156)||(25108405-25108449)
chr4 (110-158)||(27285435-27285483)
chr4 (110-174)||(30112390-30112454)
chr4 (110-158)||(35822614-35822662)
chr4 (110-158)||(37874992-37875040)
chr4 (110-158)||(38992455-38992503)
chr4 (110-158)||(39160734-39160782)
chr4 (180-224)||(45176285-45176329)
chr4 (110-158)||(47171418-47171466)
chr4 (110-158)||(49388543-49388591)
chr4 (110-158)||(56319221-56319269)
[»] chr2 (53 HSPs)
chr2 (110-224)||(17158057-17158171)
chr2 (164-224)||(15683444-15683504)
chr2 (153-220)||(19000482-19000549)
chr2 (138-224)||(40141407-40141493)
chr2 (119-224)||(27282114-27282218)
chr2 (110-158)||(10312385-10312433)
chr2 (138-205)||(26423520-26423587)
chr2 (110-160)||(1721809-1721859)
chr2 (110-160)||(14890244-14890294)
chr2 (110-160)||(20579809-20579859)
chr2 (110-160)||(36219382-36219432)
chr2 (92-158)||(36741818-36741884)
chr2 (91-160)||(3021223-3021292)
chr2 (89-158)||(12851655-12851724)
chr2 (90-158)||(7686602-7686670)
chr2 (110-158)||(42873887-42873935)
chr2 (89-160)||(8811113-8811184)
chr2 (103-158)||(10590349-10590404)
chr2 (117-160)||(23388726-23388769)
chr2 (110-165)||(29134423-29134478)
chr2 (119-158)||(40019760-40019799)
chr2 (110-160)||(6827670-6827720)
chr2 (110-160)||(9199689-9199739)
chr2 (90-156)||(14390919-14390985)
chr2 (110-160)||(16064549-16064599)
chr2 (110-160)||(17548383-17548433)
chr2 (110-196)||(23390024-23390110)
chr2 (110-160)||(26336357-26336407)
chr2 (110-160)||(28872190-28872240)
chr2 (110-160)||(40505000-40505050)
chr2 (90-160)||(41421492-41421562)
chr2 (90-156)||(43943090-43943156)
chr2 (110-160)||(44159517-44159567)
chr2 (110-160)||(45133830-45133880)
chr2 (110-155)||(2000971-2001016)
chr2 (119-224)||(5861726-5861830)
chr2 (119-160)||(6376651-6376692)
chr2 (110-163)||(26400938-26400991)
chr2 (110-158)||(5612782-5612830)
chr2 (119-163)||(6126342-6126386)
chr2 (110-158)||(10313099-10313147)
chr2 (112-160)||(11656717-11656765)
chr2 (110-158)||(18587751-18587799)
chr2 (110-158)||(26648649-26648697)
chr2 (110-158)||(29386456-29386504)
chr2 (110-158)||(31838215-31838263)
chr2 (110-158)||(32400635-32400683)
chr2 (120-160)||(34422915-34422955)
chr2 (110-158)||(38203586-38203634)
chr2 (110-158)||(38305874-38305922)
chr2 (110-158)||(39120166-39120214)
chr2 (110-158)||(40957885-40957933)
chr2 (90-158)||(41438211-41438279)
[»] scaffold0026 (1 HSPs)
scaffold0026 (119-224)||(3292-3397)
[»] chr7 (57 HSPs)
chr7 (119-224)||(3730592-3730697)
chr7 (121-224)||(29655376-29655479)
chr7 (110-170)||(12501187-12501247)
chr7 (145-207)||(18723339-18723400)
chr7 (117-202)||(37312327-37312411)
chr7 (90-158)||(3232323-3232391)
chr7 (110-189)||(5906192-5906271)
chr7 (110-160)||(3671283-3671333)
chr7 (90-160)||(5851763-5851833)
chr7 (110-160)||(18798387-18798437)
chr7 (110-160)||(20347001-20347051)
chr7 (110-160)||(35471648-35471698)
chr7 (110-160)||(35644659-35644709)
chr7 (110-160)||(43725654-43725704)
chr7 (109-158)||(2850312-2850361)
chr7 (90-158)||(4910977-4911045)
chr7 (110-158)||(12526832-12526880)
chr7 (110-158)||(26253246-26253294)
chr7 (110-158)||(27033425-27033473)
chr7 (110-158)||(38229001-38229049)
chr7 (90-224)||(32026283-32026418)
chr7 (90-224)||(32034807-32034942)
chr7 (110-165)||(49077427-49077482)
chr7 (110-160)||(1702832-1702882)
chr7 (110-160)||(4476916-4476966)
chr7 (110-160)||(6345211-6345261)
chr7 (110-160)||(6395304-6395354)
chr7 (110-160)||(8721654-8721704)
chr7 (110-160)||(9327993-9328043)
chr7 (108-170)||(21706849-21706911)
chr7 (110-148)||(21849323-21849361)
chr7 (110-160)||(21973592-21973642)
chr7 (110-160)||(24406559-24406609)
chr7 (110-160)||(27060664-27060714)
chr7 (110-160)||(29372500-29372550)
chr7 (110-160)||(31716790-31716840)
chr7 (110-160)||(33654347-33654397)
chr7 (110-160)||(40804444-40804494)
chr7 (110-160)||(41098024-41098074)
chr7 (110-160)||(46413961-46414011)
chr7 (110-160)||(48165119-48165169)
chr7 (119-160)||(8633908-8633949)
chr7 (119-160)||(31535681-31535722)
chr7 (110-163)||(33316422-33316475)
chr7 (110-155)||(45011484-45011529)
chr7 (119-172)||(48604765-48604818)
chr7 (123-183)||(10054659-10054719)
chr7 (110-158)||(11290491-11290539)
chr7 (110-158)||(23594997-23595045)
chr7 (110-158)||(25968144-25968192)
chr7 (110-158)||(26339403-26339451)
chr7 (110-158)||(29185859-29185907)
chr7 (119-155)||(29399012-29399048)
chr7 (110-158)||(33507239-33507287)
chr7 (110-158)||(34826242-34826290)
chr7 (110-158)||(36391746-36391794)
chr7 (110-158)||(45021346-45021394)
[»] chr1 (63 HSPs)
chr1 (119-224)||(29100305-29100409)
chr1 (110-163)||(6012222-6012275)
chr1 (110-158)||(38163439-38163487)
chr1 (119-224)||(45157981-45158088)
chr1 (117-197)||(49945587-49945667)
chr1 (110-197)||(50846527-50846614)
chr1 (110-160)||(3336583-3336633)
chr1 (110-160)||(3751723-3751773)
chr1 (90-160)||(11748276-11748346)
chr1 (90-160)||(16690235-16690305)
chr1 (110-160)||(28868385-28868435)
chr1 (110-160)||(36219218-36219268)
chr1 (110-160)||(51681225-51681275)
chr1 (119-163)||(15600322-15600366)
chr1 (110-158)||(24026249-24026297)
chr1 (110-158)||(31682943-31682991)
chr1 (119-163)||(33826329-33826373)
chr1 (119-163)||(33841591-33841635)
chr1 (118-202)||(49004129-49004213)
chr1 (120-183)||(8887703-8887766)
chr1 (110-160)||(2119147-2119197)
chr1 (110-160)||(7534322-7534372)
chr1 (122-224)||(7615495-7615597)
chr1 (90-156)||(9840022-9840088)
chr1 (110-160)||(20754689-20754739)
chr1 (110-160)||(32924318-32924368)
chr1 (110-160)||(38213462-38213512)
chr1 (110-160)||(40434721-40434771)
chr1 (110-160)||(41885134-41885184)
chr1 (110-160)||(44521074-44521124)
chr1 (110-160)||(50591903-50591953)
chr1 (110-160)||(50873989-50874039)
chr1 (119-160)||(1607546-1607587)
chr1 (118-183)||(5731036-5731101)
chr1 (119-160)||(6401699-6401740)
chr1 (122-163)||(8785879-8785920)
chr1 (119-160)||(9780498-9780539)
chr1 (103-156)||(15369378-15369431)
chr1 (119-160)||(17992351-17992392)
chr1 (110-163)||(21276287-21276340)
chr1 (138-219)||(23547138-23547219)
chr1 (110-155)||(42694540-42694585)
chr1 (138-206)||(3592219-3592287)
chr1 (110-158)||(4898964-4899012)
chr1 (110-158)||(5962115-5962163)
chr1 (149-197)||(8535925-8535973)
chr1 (149-197)||(8601164-8601212)
chr1 (110-158)||(11192337-11192385)
chr1 (110-158)||(11371942-11371990)
chr1 (90-158)||(17338346-17338414)
chr1 (110-158)||(17934825-17934873)
chr1 (110-158)||(19237805-19237853)
chr1 (110-158)||(26821165-26821213)
chr1 (110-158)||(30280798-30280846)
chr1 (110-158)||(30633421-30633469)
chr1 (110-158)||(30926400-30926448)
chr1 (110-158)||(32288124-32288172)
chr1 (110-158)||(33523894-33523942)
chr1 (110-158)||(35789868-35789916)
chr1 (110-158)||(36042699-36042747)
chr1 (110-158)||(41411523-41411571)
chr1 (110-158)||(46947047-46947095)
chr1 (110-158)||(48689434-48689482)
[»] chr3 (53 HSPs)
chr3 (110-224)||(49363671-49363785)
chr3 (110-163)||(33629918-33629971)
chr3 (110-160)||(43544989-43545039)
chr3 (119-224)||(21014714-21014820)
chr3 (110-160)||(31230030-31230080)
chr3 (160-218)||(39329554-39329612)
chr3 (115-160)||(16013267-16013312)
chr3 (115-160)||(39996280-39996325)
chr3 (110-158)||(19227714-19227762)
chr3 (110-158)||(31752124-31752172)
chr3 (90-158)||(33806325-33806393)
chr3 (110-224)||(43081457-43081560)
chr3 (150-206)||(44977475-44977531)
chr3 (110-158)||(46710307-46710355)
chr3 (90-158)||(50743338-50743406)
chr3 (117-224)||(10177046-10177153)
chr3 (119-154)||(35571905-35571940)
chr3 (177-224)||(38098295-38098342)
chr3 (110-160)||(9258720-9258770)
chr3 (110-160)||(16147015-16147065)
chr3 (110-160)||(18386224-18386274)
chr3 (110-160)||(21863762-21863812)
chr3 (110-160)||(23803938-23803988)
chr3 (110-160)||(31310967-31311017)
chr3 (110-160)||(33463347-33463397)
chr3 (110-160)||(35317237-35317287)
chr3 (110-160)||(37169724-37169774)
chr3 (110-160)||(38472576-38472626)
chr3 (110-160)||(41187313-41187363)
chr3 (110-224)||(51762006-51762119)
chr3 (110-160)||(53594704-53594754)
chr3 (110-160)||(54533919-54533969)
chr3 (110-160)||(55379119-55379169)
chr3 (119-160)||(18713465-18713506)
chr3 (110-155)||(27842974-27843019)
chr3 (122-175)||(31388488-31388541)
chr3 (119-160)||(31880140-31880181)
chr3 (90-143)||(35558038-35558091)
chr3 (119-160)||(47360819-47360860)
chr3 (119-160)||(49229347-49229388)
chr3 (120-160)||(6134967-6135007)
chr3 (110-158)||(8399277-8399325)
chr3 (110-158)||(22607173-22607221)
chr3 (110-158)||(26703785-26703833)
chr3 (110-158)||(30640832-30640880)
chr3 (110-158)||(40629574-40629622)
chr3 (110-158)||(42373372-42373420)
chr3 (110-158)||(43884398-43884446)
chr3 (119-163)||(46006789-46006833)
chr3 (110-158)||(46962406-46962454)
chr3 (110-158)||(52718450-52718498)
chr3 (110-158)||(54239452-54239500)
chr3 (123-163)||(54338722-54338762)
[»] chr5 (41 HSPs)
chr5 (110-183)||(18282914-18282986)
chr5 (90-160)||(7483213-7483283)
chr5 (90-158)||(39025722-39025790)
chr5 (110-158)||(42661419-42661467)
chr5 (110-160)||(3614190-3614240)
chr5 (90-160)||(16425240-16425310)
chr5 (110-160)||(32618678-32618728)
chr5 (115-160)||(6258189-6258234)
chr5 (119-160)||(27581802-27581843)
chr5 (110-162)||(4000878-4000930)
chr5 (90-158)||(7274985-7275053)
chr5 (110-158)||(8596903-8596951)
chr5 (90-158)||(18257270-18257338)
chr5 (90-158)||(23097935-23098003)
chr5 (110-158)||(34728585-34728633)
chr5 (110-160)||(292087-292137)
chr5 (90-156)||(8105263-8105329)
chr5 (110-160)||(13408018-13408068)
chr5 (110-160)||(14609559-14609609)
chr5 (110-160)||(24362971-24363021)
chr5 (90-156)||(26019895-26019961)
chr5 (110-160)||(26779779-26779829)
chr5 (117-183)||(38732893-38732959)
chr5 (119-160)||(8647121-8647162)
chr5 (110-224)||(15809388-15809504)
chr5 (90-163)||(20961334-20961407)
chr5 (119-160)||(28620752-28620793)
chr5 (119-160)||(28838221-28838262)
chr5 (119-160)||(38534406-38534447)
chr5 (119-160)||(41651166-41651207)
chr5 (117-158)||(41960063-41960104)
chr5 (110-158)||(4210277-4210325)
chr5 (110-158)||(4591213-4591261)
chr5 (110-158)||(4843450-4843498)
chr5 (110-158)||(7002084-7002132)
chr5 (110-158)||(12331201-12331249)
chr5 (110-158)||(17715332-17715380)
chr5 (119-175)||(25564179-25564235)
chr5 (110-158)||(32065016-32065064)
chr5 (110-158)||(32128875-32128923)
chr5 (110-158)||(39413147-39413195)
[»] chr8 (61 HSPs)
chr8 (118-190)||(13574912-13574984)
chr8 (103-165)||(2211771-2211833)
chr8 (110-188)||(2288913-2288991)
chr8 (119-197)||(9855205-9855283)
chr8 (138-219)||(6745532-6745613)
chr8 (123-224)||(11655433-11655534)
chr8 (90-158)||(29266580-29266648)
chr8 (90-158)||(45434874-45434942)
chr8 (110-160)||(1770194-1770244)
chr8 (110-160)||(5728755-5728805)
chr8 (110-160)||(9639406-9639456)
chr8 (122-160)||(13124936-13124974)
chr8 (120-197)||(33356422-33356499)
chr8 (90-155)||(15106003-15106068)
chr8 (90-163)||(26151481-26151554)
chr8 (120-160)||(5222800-5222840)
chr8 (90-158)||(12179666-12179734)
chr8 (90-158)||(12424094-12424162)
chr8 (90-158)||(14092865-14092933)
chr8 (110-158)||(26533948-26533996)
chr8 (110-158)||(34414873-34414921)
chr8 (110-160)||(1172850-1172900)
chr8 (110-160)||(5325037-5325087)
chr8 (138-219)||(6655838-6655920)
chr8 (138-219)||(6736240-6736322)
chr8 (110-160)||(9655827-9655877)
chr8 (110-160)||(11127380-11127430)
chr8 (110-160)||(11148331-11148381)
chr8 (90-156)||(11735570-11735636)
chr8 (110-160)||(12666990-12667040)
chr8 (108-158)||(14438894-14438944)
chr8 (110-160)||(18558374-18558424)
chr8 (108-158)||(22270423-22270473)
chr8 (154-224)||(23763114-23763184)
chr8 (117-163)||(24863616-24863662)
chr8 (110-160)||(25686945-25686995)
chr8 (110-160)||(35034744-35034794)
chr8 (118-160)||(40668802-40668844)
chr8 (110-160)||(42148816-42148866)
chr8 (110-160)||(44060871-44060921)
chr8 (114-163)||(5889349-5889398)
chr8 (119-160)||(11170089-11170130)
chr8 (109-158)||(18173442-18173491)
chr8 (138-223)||(22438051-22438135)
chr8 (119-160)||(45509998-45510039)
chr8 (110-158)||(3613093-3613141)
chr8 (110-158)||(4586319-4586367)
chr8 (110-158)||(6079303-6079351)
chr8 (110-158)||(7016879-7016927)
chr8 (110-158)||(18150679-18150727)
chr8 (110-158)||(23130083-23130131)
chr8 (110-158)||(28525568-28525616)
chr8 (110-158)||(32800121-32800169)
chr8 (110-158)||(35160962-35161010)
chr8 (110-158)||(35278990-35279038)
chr8 (110-158)||(35574959-35575007)
chr8 (110-158)||(35778592-35778640)
chr8 (110-158)||(36091349-36091397)
chr8 (110-158)||(36126771-36126819)
chr8 (110-158)||(36310565-36310613)
chr8 (110-158)||(42026183-42026231)
[»] scaffold0014 (1 HSPs)
scaffold0014 (150-218)||(74030-74098)
[»] scaffold0038 (1 HSPs)
scaffold0038 (110-160)||(37265-37315)
[»] scaffold0041 (1 HSPs)
scaffold0041 (110-158)||(28157-28205)
[»] scaffold0001 (1 HSPs)
scaffold0001 (119-170)||(197380-197431)
[»] scaffold0096 (1 HSPs)
scaffold0096 (90-160)||(10357-10427)
[»] scaffold0197 (1 HSPs)
scaffold0197 (119-160)||(4162-4203)
[»] scaffold0070 (1 HSPs)
scaffold0070 (110-158)||(47689-47737)


Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 407578 - 407801
Alignment:
Q  1 caagttttggtgatggatatttgaaaatagttagaaacgtgaaggcttttgggattgggcatctggcctactgcctaaatggtaaataatctaaaatctt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  407578 caagttttggtgatggatatttgaaaatagttagaaacgtgaaggcttttgggattgggcgtctggcctactgcctaaatggtgaataatctaaaatctt 407677  T
Q  101 gtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttg 200  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  407678 gtttcgacatttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatttttcaatgaaattttg 407777  T
Q  201 caaaaatacgtagaatattgtaaa 224  Q
    ||||||||||||||||||||||||    
T  407778 caaaaatacgtagaatattgtaaa 407801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 10685317 - 10685213
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    |||||||||||||| ||| |||||| |||  |||||| ||||||||| ||||||||||||||||| ||| ||||||||| |||| ||||  |||||||||    
T  10685317 tataaaattttcaatcaccacttttcgtctctatttt-aagtcaaattatgtgtagcctttgtattttttaatgaaattatgcagaaatgtgtagaatat 10685219  T
Q  219 tgtaaa 224  Q
    ||||||    
T  10685218 tgtaaa 10685213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 32820366 - 32820259
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgta--tctttcaatgaaattttgcaaaaatacgtagaat 216  Q
    ||||||||||| || ||| ||| ||||||| |||||| ||||||||||||||||||||||||||  | ||| ||||||||| |||| ||||| ||| |||    
T  32820366 tataaaatttttaatcaccactattggtccctattttaaagtcaaatcatgtgtagcctttgtattttttttaatgaaattgtgcataaatatgtaaaat 32820267  T
Q  217 attgtaaa 224  Q
    ||||||||    
T  32820266 attgtaaa 32820259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 4119694 - 4119591
Alignment:
Q  121 taaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattg 220  Q
    |||||||||||| ||| | |||| |||| |||||| ||||| |||||||| |||||||||||| ||||||| ||||| | || ||||   ||||||||||    
T  4119694 taaaattttcaatcaccattttttgtccctattttaaagtctaatcatgtatagcctttgtatttttcaataaaattgtacataaatgtttagaatattg 4119595  T
Q  221 taaa 224  Q
    ||||    
T  4119594 taaa 4119591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 21153932 - 21154018
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    |||||| |||| | |||||||||||| |||||| ||||| |||||| ||| ||||||||| |||| ||||| ||| |||||||||||    
T  21153932 acttttagtccgtttttttaagtcaactcatgtatagccattgtattttttaatgaaattgtgcagaaatatgtataatattgtaaa 21154018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 16855796 - 16855689
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaat 216  Q
    ||||||||||||| || ||| |||||| | ||||||||||| ||||| ||||| ||| | ||||||| ||| ||| ||||| ||||  |||  |||||||    
T  16855796 cttataaaatttttaatcaccacttttagcccttatttttatgtcaactcatgcgtaacttttgtattttttaattaaattgtgcattaatgtgtagaat 16855697  T
Q  217 attgtaaa 224  Q
    ||||||||    
T  16855696 attgtaaa 16855689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 28237153 - 28237103
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  28237153 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 28237103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 32245347 - 32245297
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  32245347 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 32245297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 32541978 - 32542026
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  32541978 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 32542026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 10839437 - 10839387
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| | | ||||||||||| |||||||||||    
T  10839437 tttagtccttataaaattttcaatcgctacttttggtccctatttttaagt 10839387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 11261491 - 11261541
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||| ||| ||||||||||| |||| ||||||    
T  11261491 tttaatccctataaaattttcaatcactacttttggtccatattattaagt 11261541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 18497648 - 18497698
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  18497648 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 18497698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 18804382 - 18804432
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  18804382 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 18804432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 28663141 - 28663091
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  28663141 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 28663091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 7268888 - 7268929
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  7268888 tataaaattttcaatcactacttttggtccctatttttaagt 7268929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 34921339 - 34921294
Alignment:
Q  113 aatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||||||||||||||| ||| | ||||||||| |||||||||    
T  34921339 aatccttataaaattttcaatcactatttttggtccctatttttaa 34921294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 3659777 - 3659717
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgt 170  Q
    |||||||  |||||||||||||| |   ||||||||||| || ||||||||||||||||||    
T  3659777 tttaatctctataaaattttcaatcctcacttttggtccctaattttaagtcaaatcatgt 3659717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 8677718 - 8677766
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  8677718 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 8677766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 18248451 - 18248403
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||||||||||| || ||| ||||||||||| |||||||||    
T  18248451 tttaatccctataaaatttttaatcactacttttggtccctatttttaa 18248403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 19247661 - 19247709
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    ||||||||||||||| ||||||| ||  ||||||||||| |||||||||    
T  19247661 tttaatccttataaatttttcaatcatcacttttggtccctatttttaa 19247709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 22084557 - 22084509
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  22084557 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 22084509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 25023267 - 25023219
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||||||||||||||  |||||||||    
T  25023267 tttagtccctataaaattttcaatcacaacttttggtctctatttttaa 25023219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 32400546 - 32400594
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  32400546 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 32400594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 16946583 - 16946469
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatac 209  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||| ||| ||| ||| ||||||||| |||| ||||      
T  16946583 tttagtccctataaaattttcaatcaccacttttggtccctatttttaagtcaactcatgtgtagcatttttattttttaatgaaattgtgcataaatgt 16946484  T
Q  210 gtagaatattgtaaa 224  Q
    |||||||||||||||    
T  16946483 gtagaatattgtaaa 16946469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 1828950 - 1829021
Alignment:
Q  89 atctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||| || ||||| | |||||||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  1828950 atctaaaattttctttcaacttttaatccctataaaattttcaatcactacttttggtccctatttttaagt 1829021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 25811110 - 25811180
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| ||| |||| | |||| ||| |||||||||||||| ||| |||||||||||||||||||||||    
T  25811110 tctaaaattttgcttcaacttttagtccatataaaattttcaatcaccacttttggtccttatttttaagt 25811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 34373186 - 34373299
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatac 209  Q
    |||| ||| ||||||| |||||| ||| ||||||||||| || |||||| |||| |||| |||||||||||||| ||| ||||||||| |||| | ||      
T  34373186 tttagtccctataaaaatttcaatcactacttttggtccctagttttaattcaactcatatgtagcctttgtat-ttttaatgaaattgtgcatatatgt 34373284  T
Q  210 gtagaatattgtaaa 224  Q
    |||||||||| ||||    
T  34373285 gtagaatattataaa 34373299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 34100998 - 34100890
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatac 209  Q
    |||| |||||||||||||||||| |||   ||||  ||| || ||||||||||| |||||| |||||||||||| ||| ||||||||| |||| ||||      
T  34100998 tttagtccttataaaattttcaatcaccttttttattccctacttttaagtcaactcatgtttagcctttgtat-ttttaatgaaattgtgcataaattt 34100900  T
Q  210 gtagaatatt 219  Q
    ||||||||||    
T  34100899 gtagaatatt 34100890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 52960474 - 52960421
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  52960474 tttagtccctataaaattttcaatcacaacttttggtccctatttttaagtcaa 52960421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 33180687 - 33180639
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  33180687 tttaatccttataaaattttcaatcactacttttggtccctatttttaa 33180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 2472618 - 2472696
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaatt 197  Q
    |||||||||||||| ||  ||||||| | | ||||||||||  |||| ||||||||||||||||  |||||||||||||    
T  2472618 tataaaattttcaatcatcacttttgtttcctatttttaagataaattatgtgtagcctttgtacttttcaatgaaatt 2472696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 3613819 - 3613869
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  3613819 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 3613869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 27553441 - 27553391
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  27553441 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 27553391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 48480331 - 48480381
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  48480331 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 48480381  T

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Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 35884512 - 35884585
Alignment:
Q  111 ttaatcct-tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    |||||||| |||||||||||||| ||| |||||| |||  |||||| || |||| |||||||||||||||||||    
T  35884512 ttaatcctatataaaattttcaatcaccactttttgtctctattttaaaatcaactcatgtgtagcctttgtat 35884585  T

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Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 9366302 - 9366234
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  9366302 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 9366234  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 13428295 - 13428227
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  13428295 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 13428227  T

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Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 14254838 - 14254770
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||||||  |||| | |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  14254838 tctaaaatcttccttcaacttttagtccctataaaattttcaatcactacttttggtccctatttttaa 14254770  T

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Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 32335306 - 32335231
Alignment:
Q  134 cacaacttttggtccttatttttaagtcaaatcatgtgtagc--ctttgtatctttcaatgaaattttgcaaaaat 207  Q
    |||||||||||||||  | ||||||||||  ||||||||||   |||| ||| |||||||||||||||||||||||    
T  32335306 cacaacttttggtccacacttttaagtcagctcatgtgtagtatctttttatttttcaatgaaattttgcaaaaat 32335231  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 42512115 - 42512067
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  42512115 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 42512067  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 47405263 - 47405199
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    ||||||| |||||| |||   |||| ||||||||||||||||||| ||||||||| |||||||||    
T  47405263 tataaaactttcaatcacccttttttgtccttatttttaagtcaactcatgtgtaacctttgtat 47405199  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 49332879 - 49332811
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  49332879 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 49332811  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 39652620 - 39652565
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaat 165  Q
    |||| ||| |||||||||||||| ||| ||||||||||| ||||||||||| ||||    
T  39652620 tttagtccctataaaattttcaatcactacttttggtccctatttttaagtaaaat 39652565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 4894457 - 4894407
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  4894457 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 4894407  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 9730391 - 9730341
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||||||||||||||||  ||| |||||| |||| |||||||||||    
T  9730391 tttaatccttataaaattttcagtcactacttttagtccctatttttaagt 9730341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 10397746 - 10397796
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| | | ||||||||||| |||||||||||    
T  10397746 tttagtccttataaaattttcaatcgctacttttggtccctatttttaagt 10397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 15169783 - 15169733
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  15169783 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 15169733  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 23624181 - 23624131
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||| ||| |||||||||||    
T  23624181 tttagtccttataaaattttcaatcactacttttgatccctatttttaagt 23624131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 28426748 - 28426698
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  28426748 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 28426698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 30188521 - 30188471
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| | |||||||||||||||||||||    
T  30188521 tttagtccctataaaattttcaatcactaattttggtccttatttttaagt 30188471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 38704749 - 38704799
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| | | ||||||||||| |||||||||||    
T  38704749 tttagtccttataaaattttcaatcgctacttttggtccctatttttaagt 38704799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 39910678 - 39910728
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  39910678 tttagtccatataaaattttcaatcactacttttggtccatatttttaagt 39910728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 42899465 - 42899395
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| || ||||| | |||| ||| |||||||||||||| ||| | ||||||||| |||||||||||    
T  42899465 tctaaaattttctttcaacttttagtccctataaaattttcaatcactaattttggtccctatttttaagt 42899395  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 47628890 - 47628840
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  47628890 tttagtccctataaaattttcaatcactacttttggtccatatttttaagt 47628840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 49013645 - 49013595
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  49013645 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 49013595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 56360090 - 56360140
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||| |||||||||||||||    
T  56360090 tttagtccctataaaattttcaatcactacttttgatccttatttttaagt 56360140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 4825047 - 4825088
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||||||  ||||||||||| |||||||||||    
T  4825047 tataaaattttcaaccaacacttttggtccctatttttaagt 4825088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 5092629 - 5092670
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  5092629 tataaaattttcaatcgctacttttggtccttatttttaagt 5092670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 12591574 - 12591525
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaag 159  Q
    |||||| |||||| ||||||||| ||| ||||||||||| ||||||||||    
T  12591574 tttaattcttatagaattttcaatcactacttttggtccatatttttaag 12591525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 14488408 - 14488449
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  14488408 tataaaattttcaaccactacttgtggtccctatttttaagt 14488449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 19689871 - 19689818
Alignment:
Q  103 ttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  19689871 ttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 19689818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 19700456 - 19700403
Alignment:
Q  103 ttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  19700456 ttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 19700403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 22786848 - 22786893
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  22786848 tttagtccttataaaattttcaatcactacttttggtccctatttt 22786893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 26903014 - 26902965
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaag 159  Q
    |||| ||||||||||||||||||| || | ||||||||| ||||||||||    
T  26903014 tttagtccttataaaattttcaactactatttttggtccatatttttaag 26902965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 29384682 - 29384727
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    |||||||||||  ||||||||||||| ||||||||||| |||||||    
T  29384682 acttttggtccccatttttaagtcaattcatgtgtagcatttgtat 29384727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 32801145 - 32801104
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| |||||||||||||||||| ||||    
T  32801145 tataaaattttcaatcactacttttggtccttattttaaagt 32801104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 39151038 - 39150973
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||||||| || ||||| | |||| ||| |||||||||||||| ||| ||||||||||| ||||||    
T  39151038 tctaaaatattctttcaacttttagtccctataaaattttcaatcactacttttggtccctatttt 39150973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 1620866 - 1620818
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  1620866 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 1620818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 5511765 - 5511813
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  5511765 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 5511813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 5519709 - 5519661
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  5519709 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 5519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 5985805 - 5985737
Alignment:
Q  92 taaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||| || ||||| | ||||||| |||||||| ||||||||| |||||| ||||  |||||||||||    
T  5985805 taaaattttctttcaacttttaatctttataaaaatttcaaccaaaactttgggtctctatttttaagt 5985737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 6212940 - 6212988
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  6212940 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 6212988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 11493048 - 11493000
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  11493048 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 11493000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 12294168 - 12294120
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  12294168 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 12294120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 12854517 - 12854469
Alignment:
Q  177 tttgtatctttcaatgaaattttgcaaaaatacgtagaatattgtaaat 225  Q
    ||||||| ||| |||||||||||||| ||||| |||||| |||||||||    
T  12854517 tttgtattttttaatgaaattttgcagaaatatgtagaaaattgtaaat 12854469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 13403838 - 13403778
Alignment:
Q  123 aaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    |||||||||| ||  ||||||||||  |||||||||||||| ||||||||||  |||||||    
T  13403838 aaattttcaatcatcacttttggtctctatttttaagtcaattcatgtgtagtatttgtat 13403778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 16959378 - 16959310
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||| | |||||||||    
T  16959378 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggttcctatttttaa 16959310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 25108405 - 25108449
Alignment:
Q  112 taatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||||| |||||||||||||| ||| ||||||||||| |||||||    
T  25108405 taatccctataaaattttcaatcactacttttggtccctattttt 25108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 27285483 - 27285435
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  27285483 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 27285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 30112390 - 30112454
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtag 174  Q
    |||| |||||||||||||||||| ||| ||||||||||| | |||| |||| || |||| |||||    
T  30112390 tttagtccttataaaattttcaatcactacttttggtccctcttttaaagtaaactcatatgtag 30112454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 35822614 - 35822662
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  35822614 tttagtccgtataaaattttcaatcactacttttggtccctatttttaa 35822662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 37874992 - 37875040
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  37874992 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 37875040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 38992503 - 38992455
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  38992503 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 38992455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 39160782 - 39160734
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  39160782 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 39160734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 45176285 - 45176329
Alignment:
Q  180 gtatctttcaatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    |||| ||||||||||||| | |||||||| |||||||||||||||    
T  45176285 gtatatttcaatgaaattatacaaaaatatgtagaatattgtaaa 45176329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 47171466 - 47171418
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| |||||||||||||| ||| |||||| |||| |||||||||    
T  47171466 tttaatccctataaaattttcaatcactacttttagtccctatttttaa 47171418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 49388591 - 49388543
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||| | |||||||||    
T  49388591 tttagtccttataaaattttcaatcactacttttggttcctatttttaa 49388543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 56319221 - 56319269
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  56319221 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 56319269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 17158057 - 17158171
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatac 209  Q
    |||| ||| |||||||||||||| ||| ||||||  ||| ||||| |||||||||| ||||||||| ||||||| ||||||||||||| |||| ||||      
T  17158057 tttagtccctataaaattttcaatcaccacttttaatccctatttctaagtcaaattatgtgtagcatttgtatttttcaatgaaattatgcagaaatgt 17158156  T
Q  210 gtagaatattgtaaa 224  Q
    |||||||||||||||    
T  17158157 gtagaatattgtaaa 17158171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 15683504 - 15683444
Alignment:
Q  164 atcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||||    
T  15683504 atcatgtgtagcctttgtatttttcaatgaaattatgcaaaaatgcgtacaatattgtaaa 15683444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 19000482 - 19000549
Alignment:
Q  153 ttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattg 220  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||| |||| ||||  |||||||||||    
T  19000482 ttttaagacaaatcatgtgtagcctttgtatttttcaaagaaattgtgcagaaatgtgtagaatattg 19000549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 40141493 - 40141407
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    ||||||| ||| |||||||||||||| |  |||||||||||||||| ||| |||||| || |||||||||   ||||||||||||||    
T  40141493 acttttgatccatatttttaagtcaacttgtgtgtagcctttgtattttttaatgaatttgtgcaaaaatttatagaatattgtaaa 40141407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 27282218 - 27282114
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    ||||||| ||| || ||| | |||| ||||||||||||||| ||| |||||| || ||||||||| ||| ||||||||| || | ||||| |||||||||    
T  27282218 tataaaaattttaatcaccatttttagtccttatttttaagccaactcatgtttaacctttgtat-ttttaatgaaattgtggagaaatatgtagaatat 27282120  T
Q  219 tgtaaa 224  Q
    ||||||    
T  27282119 tgtaaa 27282114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 10312385 - 10312433
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  10312385 tttaatccttataaaattttcaatcactacttttggtccttgtttttaa 10312433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Original strand, 26423520 - 26423587
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaa 205  Q
    ||||||||| | |||||||||||||| |||||||||| ||||||||  || ||||||||| |||||||    
T  26423520 acttttggttcctatttttaagtcaactcatgtgtagtctttgtattgtttaatgaaattgtgcaaaa 26423587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 1721809 - 1721859
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  1721809 tttaatccctataaaattttcaatcactacttttggtccctatttttaagt 1721859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 14890294 - 14890244
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  14890294 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 14890244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 20579859 - 20579809
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  20579859 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 20579809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 36219382 - 36219432
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  36219382 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 36219432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 36741884 - 36741818
Alignment:
Q  92 taaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||| || ||||| | |||||||| |||||||||||||| ||| ||||||||||| |||||||||    
T  36741884 taaaattttctttcaacttttaatccctataaaattttcaatcactacttttggtccctatttttaa 36741818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 3021223 - 3021292
Alignment:
Q  91 ctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||| || ||||| | |||| |||||||||||||||||| ||| |||||||||||  ||||||||||    
T  3021223 ctaaaattttctttcaacttttagtccttataaaattttcaatcactacttttggtcccaatttttaagt 3021292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 12851724 - 12851655
Alignment:
Q  89 atctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    ||||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  12851724 atctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 12851655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 7686602 - 7686670
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  7686602 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 7686670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 42873935 - 42873887
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  42873935 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 42873887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 8811113 - 8811184
Alignment:
Q  89 atctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||| ||  |||| | |||| |||||||||||||||||| ||| ||||| ||||| |||||||||||    
T  8811113 atctaaaattttccttcaacttttagtccttataaaattttcaatcactactttgggtccctatttttaagt 8811184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 10590349 - 10590404
Alignment:
Q  103 ttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  10590349 ttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 10590404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 23388769 - 23388726
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||    
T  23388769 cttataaaattttcaatcactacttttggtccttatatttaagt 23388726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 29134478 - 29134423
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaat 165  Q
    |||||||| |||||||||||||| ||| ||||||| ||| | ||||||||||||||    
T  29134478 tttaatccctataaaattttcaatcactacttttgatccctgtttttaagtcaaat 29134423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 40019799 - 40019760
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  40019799 tataaaattttcaaccactacttttggtccctatttttaa 40019760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 6827670 - 6827720
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  6827670 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 6827720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 9199689 - 9199739
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||| ||| |||||||||||    
T  9199689 tttagtccttataaaattttcaatcactacttttgatccctatttttaagt 9199739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 14390919 - 14390985
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  14390919 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 14390985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 16064549 - 16064599
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  16064549 tttagtccctataaaattttcaatcactacttttggtccatatttttaagt 16064599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 17548383 - 17548433
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  17548383 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 17548433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 23390024 - 23390110
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaat 196  Q
    |||| ||| |||||||||||||| ||| | ||||||||| ||||||||| |||| ||||| ||||  ||| ||| ||| ||||||||    
T  23390024 tttagtccctataaaattttcaatcaccaattttggtccatatttttaaatcaattcatgagtagaatttttattttttaatgaaat 23390110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 26336357 - 26336407
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||| ||  ||||||||||| |||||||||||    
T  26336357 tttaatccctataaaattttcaatcaatacttttggtccctatttttaagt 26336407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 28872190 - 28872240
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  28872190 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 28872240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 40505050 - 40505000
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||||||| || |||||||| |||||||||||    
T  40505050 tttagtccctataaaattttcaaccactacatttggtccctatttttaagt 40505000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 41421492 - 41421562
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| || ||||| | |||||||| ||||||||||| || ||| ||||||| ||| |||||||||||    
T  41421492 tctaaaattttctttcaacttttaatccctataaaatttttaatcactacttttgatccctatttttaagt 41421562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 43943156 - 43943090
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  43943156 tctaaaatttttcttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 43943090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 44159517 - 44159567
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  44159517 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 44159567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 45133830 - 45133880
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  45133830 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 45133880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 2001016 - 2000971
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||| ||| |||||||||||||| ||| ||||||||||||||||||    
T  2001016 tttagtccctataaaattttcaatcactacttttggtccttatttt 2000971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 5861726 - 5861830
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    |||||||||||||| ||| || ||||| || || ||||||| ||||||||  | || |||||| | ||||||||||||| |||| ||||  ||| |||||    
T  5861726 tataaaattttcaatcaccacgtttggcccctacttttaagacaaatcatacgcagtctttgtct-tttcaatgaaattgtgcagaaatgtgtataatat 5861824  T
Q  219 tgtaaa 224  Q
    ||||||    
T  5861825 tgtaaa 5861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 6376692 - 6376651
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  6376692 tataaaattttcaatcactacttttggtccctatttttaagt 6376651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 26400938 - 26400991
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||| ||| ||||||||||| || ||| ||||||| ||||||||||||||||||    
T  26400938 tttagtccctataaaattttaaatcaccacttttgatccttatttttaagtcaa 26400991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 5612830 - 5612782
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  5612830 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 5612782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 6126386 - 6126342
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||||||||| ||| ||||||||||  ||||||||||||||    
T  6126386 tataaaattttcaatcactacttttggtctctatttttaagtcaa 6126342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 10313099 - 10313147
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  10313099 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 10313147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 11656765 - 11656717
Alignment:
Q  112 taatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||| |||||||||||||| ||| ||||||||||| |||||| ||||    
T  11656765 taatccctataaaattttcaatcactacttttggtccctattttaaagt 11656717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 18587799 - 18587751
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  18587799 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 18587751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 26648697 - 26648649
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  26648697 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 26648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 29386456 - 29386504
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  29386456 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 29386504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 31838215 - 31838263
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  31838215 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 31838263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 32400635 - 32400683
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  32400635 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 32400683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 34422915 - 34422955
Alignment:
Q  120 ataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  34422915 ataaaattttcaatcactacttttggtccctatttttaagt 34422955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 38203586 - 38203634
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  38203586 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 38203634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 38305922 - 38305874
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  38305922 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 38305874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 39120166 - 39120214
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||| ||||||| ||| ||||||||||| |||||||||    
T  39120166 tttagtccttataaagttttcaatcactacttttggtccctatttttaa 39120214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 40957933 - 40957885
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  40957933 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 40957885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 41438279 - 41438211
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| || ||||| | |||| ||  |||||||||||||| ||| ||||||||||| |||||||||    
T  41438279 tctaaaattttctttcaacttttagtctctataaaattttcaatcactacttttggtccctatttttaa 41438211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 3397 - 3292
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    |||||||||||||| ||  |||||| |||| |||||||||||||| ||||||||||||||||||  ||| || |||||| |||| ||||| |||||||||    
T  3397 tataaaattttcaatcatcactttttgtccctatttttaagtcaactcatgtgtagcctttgtactttttaacgaaattgtgcataaatatgtagaatat 3298  T
Q  219 tgtaaa 224  Q
    ||||||    
T  3297 tgtaaa 3292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 3730592 - 3730697
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    ||||||| |||||| ||| ||||||||||  |||||||||||||| ||||||| ||||||||||| ||| ||||||||| |||  ||||  ||| |||||    
T  3730592 tataaaaatttcaatcaccacttttggtctctatttttaagtcaactcatgtgcagcctttgtattttttaatgaaattatgctgaaatgtgtaaaatat 3730691  T
Q  219 tgtaaa 224  Q
    ||||||    
T  3730692 tgtaaa 3730697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 29655479 - 29655376
Alignment:
Q  121 taaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattg 220  Q
    |||||||||||||||  | |||| |||| ||||||||||| |  ||||||||||||||||||| ||| ||||||||| |||| ||||| ||| ||||||     
T  29655479 taaaattttcaaccatcaattttagtccatatttttaagtaagctcatgtgtagcctttgtattttttaatgaaattatgcagaaatatgtataatatta 29655380  T
Q  221 taaa 224  Q
    ||||    
T  29655379 taaa 29655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 12501247 - 12501187
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgt 170  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||||||||||||| ||||||    
T  12501247 tttaatccttataaaaatttcaattacaactttttgtccttatttttaagtcaactcatgt 12501187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 18723339 - 18723400
Alignment:
Q  145 gtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaat 207  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||||||    
T  18723339 gtccttatttttaagtcaactcatgtgtagcatttgtat-ttttaatgaaattatgcaaaaat 18723400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 37312411 - 37312327
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgca 202  Q
    |||||||||||||||| ||| |||||| |||  |||||| ||| ||| ||||||||||||||||||| ||| ||||||||| ||||    
T  37312411 cttataaaattttcaatcaccacttttagtctctatttt-aagacaactcatgtgtagcctttgtattttttaatgaaattgtgca 37312327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 3232391 - 3232323
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||||||||||||||| |||||||||    
T  3232391 tctaaaattttccttcaacatttagtccctataaaattttcaatcacaacttttggtccctatttttaa 3232323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 5906192 - 5906271
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttca 189  Q
    |||| |||||||||||||||||| ||| | ||||  ||  |||||||||||||||||||||||| | ||||||| |||||    
T  5906192 tttagtccttataaaattttcaatcaccattttttatcgctatttttaagtcaaatcatgtgtaacttttgtatttttca 5906271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 3671333 - 3671283
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  3671333 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 3671283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 5851833 - 5851763
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| ||  |||||| |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  5851833 tctaaaattttccttcagcttttagtccctataaaattttcaatcactacttttggtccctatttttaagt 5851763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 18798437 - 18798387
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  18798437 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 18798387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 20347001 - 20347051
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  20347001 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 20347051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 35471648 - 35471698
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||| ||||||||||||||||| ||| ||||||||||| |||||||||||    
T  35471648 tttaaaccttataaaattttcaatcactacttttggtccctatttttaagt 35471698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 35644659 - 35644709
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  35644659 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 35644709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 43725654 - 43725704
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||||||    
T  43725654 tttagtccttataaaattttcaaccattacttttggtccctatttttaagt 43725704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 2850312 - 2850361
Alignment:
Q  109 atttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    ||||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  2850312 atttagtccctataaaattttcaatcactacttttggtccttatttttaa 2850361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 4910977 - 4911045
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| || ||||| | |||||||||| |||||||||||| ||| ||||||||| | |||||||||    
T  4910977 tctaaaattttctttcaacttttaatccttttaaaattttcaatcactacttttggttcctatttttaa 4911045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 12526880 - 12526832
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||||||||    
T  12526880 tttaatccttataaaaatttcaattacaactttttgtccttatttttaa 12526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 26253246 - 26253294
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  26253246 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 26253294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 27033425 - 27033473
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  27033425 tttagtccctataaaattttcaatcactacttttggtccttatttttaa 27033473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 38229049 - 38229001
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  38229049 tttagtccctataaaattttcaatcactacttttggtccttatttttaa 38229001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 224
Target Start/End: Complemental strand, 32026418 - 32026283
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgt-agcctttgtatctttc 188  Q
    |||||||||||  |||  | |||||||  |||||||||||||| | | | ||||| ||| || ||||||  |||||||||||| ||||||||||| |||     
T  32026418 tctaaaatcttccttcgacttttaatctatataaaattttcaatctccatttttgttccctaattttaaaacaaatcatgtgtaagcctttgtatttttt 32026319  T
Q  189 aatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    ||||||||| |||| ||||  ||  |||||||||||    
T  32026318 aatgaaattgtgcagaaatgtgttcaatattgtaaa 32026283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 224
Target Start/End: Complemental strand, 32034942 - 32034807
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgt-agcctttgtatctttc 188  Q
    |||||||||||  |||  | |||||||  |||||||||||||| | | | ||||| ||| || ||||||  |||||||||||| ||||||||||| |||     
T  32034942 tctaaaatcttccttcgacttttaatctatataaaattttcaatctccatttttgttccctaattttaaaacaaatcatgtgtaagcctttgtatttttt 32034843  T
Q  189 aatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    ||||||||| |||| ||||  ||  |||||||||||    
T  32034842 aatgaaattgtgcagaaatgtgttcaatattgtaaa 32034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 49077427 - 49077482
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaat 165  Q
    |||| ||||||||||||| |||| ||| |||||||||||||| |||||||| ||||    
T  49077427 tttagtccttataaaattgtcaatcactacttttggtccttacttttaagttaaat 49077482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 1702882 - 1702832
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  1702882 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 1702832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 4476966 - 4476916
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  4476966 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 4476916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 6345211 - 6345261
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  6345211 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 6345261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 6395304 - 6395354
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  6395304 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 6395354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 8721654 - 8721704
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||| ||||||    
T  8721654 tttagtccttataaaattttcaatcactacttttggtccctattattaagt 8721704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 9327993 - 9328043
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  9327993 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 9328043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 21706849 - 21706911
Alignment:
Q  108 catttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgt 170  Q
    |||||| || ||||||||||||||| |||| |||||||||| |||||| || |||| ||||||    
T  21706849 catttagtcattataaaattttcaatcacaccttttggtccctattttaaaatcaactcatgt 21706911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 21849323 - 21849361
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtcc 148  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  21849323 tttaatccttataaaattttcaatcactacttttggtcc 21849361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 21973592 - 21973642
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  21973592 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 21973642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 24406559 - 24406609
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  24406559 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 24406609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 27060664 - 27060714
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  27060664 tttagtccttataaaattttcaatcactacttttggtccctattttaaagt 27060714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 29372550 - 29372500
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| |||||| |||| |||||||||||    
T  29372550 tttagtccttataaaattttcaatcactactttttgtccctatttttaagt 29372500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 31716790 - 31716840
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  31716790 tttagtccctataaaattttcaaacactacttttggtccctatttttaagt 31716840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 33654397 - 33654347
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  33654397 tttagtccctataaaattttcaatcactacttttggtccatatttttaagt 33654347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 40804444 - 40804494
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||||||  |||| |||||||||| |||||||    
T  40804444 tttaatccctataaaattttcaaccattacttatggtccttatatttaagt 40804494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 41098074 - 41098024
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  41098074 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 41098024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 46413961 - 46414011
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  46413961 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 46414011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 48165169 - 48165119
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  48165169 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 48165119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 8633908 - 8633949
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||||| |||| ||||||||||||||||    
T  8633908 tataaaattttcaatcacaattttttgtccttatttttaagt 8633949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 31535681 - 31535722
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  31535681 tataaaattttcaatcactacttttggtccatatttttaagt 31535722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 33316475 - 33316422
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||| ||| |||||||||||||| ||| ||||||||||  ||||||||||||||    
T  33316475 tttagtccctataaaattttcaatcactacttttggtcactatttttaagtcaa 33316422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 45011529 - 45011484
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  45011529 tttagtccttataaaattttcaatcactacttttggtccctatttt 45011484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 48604765 - 48604818
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgt 172  Q
    |||||||||||||| ||| | ||||||| | |||||||||||||| ||||||||    
T  48604765 tataaaattttcaatcaccatttttggttcatatttttaagtcaattcatgtgt 48604818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 10054719 - 10054659
Alignment:
Q  123 aaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    ||||||| || ||| ||||||  |||||||||||||||||| ||||||||| | |||||||    
T  10054719 aaatttttaatcactactttttatccttatttttaagtcaactcatgtgtaccatttgtat 10054659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 11290539 - 11290491
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  11290539 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 11290491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 23594997 - 23595045
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  23594997 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 23595045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 25968144 - 25968192
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  25968144 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 25968192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 26339451 - 26339403
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  26339451 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 26339403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 29185859 - 29185907
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  29185859 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 29185907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 29399048 - 29399012
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  29399048 tataaaattttcaatcactacttttggtccttatttt 29399012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 33507239 - 33507287
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  33507239 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 33507287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 34826242 - 34826290
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  34826242 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 34826290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 36391794 - 36391746
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| || |||||||| |||||||||    
T  36391794 tttagtccttataaaattttcaatcactacctttggtccctatttttaa 36391746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 45021394 - 45021346
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  45021394 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 45021346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 29100305 - 29100409
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    ||||| |||||||| ||| | |||| ||||||||||||||| ||||||||||||| || ||| || ||||||||||||| |||| ||||  |||||||||    
T  29100305 tataagattttcaatcaccaatttttgtccttatttttaagacaaatcatgtgtaacc-ttggatttttcaatgaaattgtgcataaatgtgtagaatat 29100403  T
Q  219 tgtaaa 224  Q
    ||||||    
T  29100404 tgtaaa 29100409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 6012222 - 6012275
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  6012222 tttagtccctataaaattttcaatcacaacttttggtccctatttttaagtcaa 6012275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 38163439 - 38163487
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  38163439 tttaatccctataaaattttcaatcactacttttggtccttatttttaa 38163487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 45157981 - 45158088
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgta--tctttcaatgaaattttgcaaaaatacgtagaat 216  Q
    |||||||||||||| ||| ||||||||||  ||||| ||| | || |||| |||||||||||||  | ||| ||||||||| |||||||||  |||||||    
T  45157981 tataaaattttcaatcaccacttttggtcactatttataaataaactcatatgtagcctttgtattttttttaatgaaattgtgcaaaaatttgtagaat 45158080  T
Q  217 attgtaaa 224  Q
    ||| ||||    
T  45158081 attataaa 45158088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 49945667 - 49945587
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaatt 197  Q
    |||||||||||||||| ||||||||||| | | |||||||||||||| |||||| ||| |||| ||  ||| |||||||||    
T  49945667 cttataaaattttcaatcacaacttttgattcatatttttaagtcaactcatgtatagtctttctagtttttaatgaaatt 49945587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 197
Target Start/End: Original strand, 50846527 - 50846614
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaatt 197  Q
    |||| ||| ||||||||||| || ||  ||||||||||| |||||||||||||| ||||||||| | ||||||| ||  |||||||||    
T  50846527 tttagtccctataaaatttttaatcatcacttttggtccctatttttaagtcaattcatgtgtaacatttgtattttataatgaaatt 50846614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 3336633 - 3336583
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  3336633 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 3336583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 3751773 - 3751723
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||||||  ||||||||||| |||||||||||    
T  3751773 tttagtccttataaaattttcaaccattacttttggtccctatttttaagt 3751723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 11748276 - 11748346
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||  |||| | |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  11748276 tctaaaatcttccttcaacttttagtccatataaaattttcaatcactacttttggtccctatttttaagt 11748346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 16690235 - 16690305
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| ||  |||||| |||||||| ||||||||||| || ||| |||||||||| ||||||||||||    
T  16690235 tctaaaattttccttcagcttttaatccctataaaatttttaatcactacttttggtctttatttttaagt 16690305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 28868435 - 28868385
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  28868435 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 28868385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 36219268 - 36219218
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  36219268 tttaatccctataaaattttcaatcactacttttggtccctatttttaagt 36219218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 51681275 - 51681225
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  51681275 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 51681225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 15600322 - 15600366
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  15600322 tataaaattttcaatcaccacttttggtctttatttttaagtcaa 15600366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 24026249 - 24026297
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| |||||||||||| ||||||||    
T  24026249 tttagtccttataaaattttcaatcactacttttggtcctcatttttaa 24026297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 31682943 - 31682991
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  31682943 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 31682991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 33826373 - 33826329
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||    
T  33826373 tataaaattttcaatcactacttttgatccttatttttaagtcaa 33826329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 33841591 - 33841635
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||    
T  33841591 tataaaattttcaatcactacttttgatccttatttttaagtcaa 33841635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Complemental strand, 49004213 - 49004129
Alignment:
Q  118 ttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgca 202  Q
    |||||||||||| || ||| | ||||  || ||||||||||||||||| ||||   |||||||||| ||||||||||||| ||||    
T  49004213 ttataaaattttgaatcaccattttttatctttatttttaagtcaaattatgtactgcctttgtatttttcaatgaaattgtgca 49004129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 8887766 - 8887703
Alignment:
Q  120 ataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    ||||| ||||||| |||||||||| ||||  ||||||||||||| |||||||||  ||||||||    
T  8887766 ataaatttttcaagcacaacttttagtccccatttttaagtcaactcatgtgtaaactttgtat 8887703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 2119147 - 2119197
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||||||||||||| |||| ||| ||||||||||| |||||||||||    
T  2119147 tttagtccttataaaattctcaatcactacttttggtccctatttttaagt 2119197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 7534372 - 7534322
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||| ||| |||||||||||    
T  7534372 tttagtccttataaaattttcaatcactacttttgatccctatttttaagt 7534322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 7615495 - 7615597
Alignment:
Q  122 aaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattgt 221  Q
    ||||||||||||||| | |||  |||| |||||||||| ||| ||||  ||||||||| ||| ||| ||||| |||  ||||||||  |||||||||| |    
T  7615495 aaaattttcaaccaccattttatgtccctatttttaagccaactcatacgtagcctttatattttttaatgatattgggcaaaaatctgtagaatattat 7615594  T
Q  222 aaa 224  Q
    |||    
T  7615595 aaa 7615597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 9840022 - 9840088
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  9840022 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 9840088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 20754739 - 20754689
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| | |||||||||||| ||| ||||||||||| |||||||||||    
T  20754739 tttaatccctgtaaaattttcaatcactacttttggtccctatttttaagt 20754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 32924318 - 32924368
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  32924318 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 32924368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 38213512 - 38213462
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  38213512 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 38213462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 40434771 - 40434721
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| | | ||||||||||| |||||||||||    
T  40434771 tttagtccttataaaattttcaatcgctacttttggtccctatttttaagt 40434721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 41885134 - 41885184
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||| || ||||||||||||    
T  41885134 tttagtccttataaaattttcaatcactacttttgatctttatttttaagt 41885184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 44521074 - 44521124
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  44521074 tttagtccctataaaattttcaatcactacttttggtccatatttttaagt 44521124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 50591903 - 50591953
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  50591903 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 50591953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 50873989 - 50874039
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||| ||| |||||||| || |||||||||||    
T  50873989 tttaatccctataaaattttcaatcactacttttggcccctatttttaagt 50874039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 1607546 - 1607587
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||| |||||||||||||||    
T  1607546 tataaaattttcaatcactacttttgatccttatttttaagt 1607587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 5731036 - 5731101
Alignment:
Q  118 ttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    ||||||||||||||| ||  ||||||| ||  ||||||||| |||| ||||||||||| |||||||    
T  5731036 ttataaaattttcaatcatcacttttgttctctatttttaaatcaattcatgtgtagcatttgtat 5731101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 6401699 - 6401740
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  6401699 tataaaattttcaatcactacttttggtccctatttttaagt 6401740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 8785879 - 8785920
Alignment:
Q  122 aaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    ||||||||||| ||| |||||||||||||||||||| |||||    
T  8785879 aaaattttcaatcactacttttggtccttatttttatgtcaa 8785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 9780539 - 9780498
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  9780539 tataaaattttcaatcactacttttggtccctatttttaagt 9780498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 15369431 - 15369378
Alignment:
Q  103 ttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  15369431 ttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 15369378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 17992392 - 17992351
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  17992392 tataaaattttcaatcactacttttggtccctatttttaagt 17992351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 21276287 - 21276340
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||| ||| |||||||||||||| ||| ||||||||| | ||||||||||||||    
T  21276287 tttagtccctataaaattttcaatcactacttttggttcctatttttaagtcaa 21276340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 23547219 - 23547138
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatatt 219  Q
    |||||| || |||| |||| ||||||||||||| || ||||| ||| ||| ||| ||||||| ||||||||  |||||||||    
T  23547219 acttttagtgcttactttttagtcaaatcatgtctaacctttatattttttaataaaatttttcaaaaatagatagaatatt 23547138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 42694540 - 42694585
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||| ||| |||||||||||||||||  ||||||||||||||||||    
T  42694540 tttagtccctataaaattttcaaccaacacttttggtccttatttt 42694585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 3592219 - 3592287
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaa 206  Q
    ||||||||||| || |||||||  || |||||||| | |||| ||| ||| ||||||||||||||||||    
T  3592219 acttttggtccctacttttaagcaaactcatgtgtggtctttatatttttgaatgaaattttgcaaaaa 3592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 4898964 - 4899012
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  4898964 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 4899012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 5962115 - 5962163
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| |||||| |||| |||||||||    
T  5962115 tttagtccttataaaattttcaatcactacttttagtccatatttttaa 5962163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 8535925 - 8535973
Alignment:
Q  149 ttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaatt 197  Q
    |||||||||||||||  ||||||||  |||||||| |||||||||||||    
T  8535925 ttatttttaagtcaacacatgtgtatactttgtatttttcaatgaaatt 8535973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 8601164 - 8601212
Alignment:
Q  149 ttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaatt 197  Q
    |||||||||||||||  ||||||||  |||||||| |||||||||||||    
T  8601164 ttatttttaagtcaacacatgtgtatactttgtatttttcaatgaaatt 8601212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 11192337 - 11192385
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  11192337 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 11192385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 11371990 - 11371942
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  11371990 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 11371942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 17338414 - 17338346
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| || ||||| | |||| ||| |||||| ||||||| ||| ||||||||||| |||||||||    
T  17338414 tctaaaattttctttcaacttttagtccctataaagttttcaatcactacttttggtccctatttttaa 17338346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 17934825 - 17934873
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  17934825 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 17934873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 19237805 - 19237853
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  19237805 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 19237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 26821213 - 26821165
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||||||||||||||  || ||||||||||| |||||||||    
T  26821213 tttaatccctataaaattttcaatgactacttttggtccctatttttaa 26821165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 30280846 - 30280798
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||| ||||||| ||| ||||||||||| |||||||||    
T  30280846 tttagtccttataaagttttcaatcactacttttggtccctatttttaa 30280798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 30633469 - 30633421
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  30633469 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 30633421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 30926448 - 30926400
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  30926448 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 30926400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 32288124 - 32288172
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  32288124 tttagtccatataaaattttcaatcactacttttggtccctatttttaa 32288172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 33523894 - 33523942
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  33523894 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 33523942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 35789916 - 35789868
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  35789916 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 35789868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 36042747 - 36042699
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  36042747 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 36042699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 41411523 - 41411571
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  41411523 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 41411571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 46947047 - 46947095
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  46947047 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 46947095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 48689482 - 48689434
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  48689482 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 48689434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 49363785 - 49363671
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatac 209  Q
    |||||||| | |||||||||||| ||  ||||||  ||| |||||| |||  |||||||||||||  ||||||| ||| |||||||||||||| |||||     
T  49363785 tttaatccctgtaaaattttcaatcatcactttttatccatattttaaagataaatcatgtgtagtttttgtattttttaatgaaattttgcataaatat 49363686  T
Q  210 gtagaatattgtaaa 224  Q
    | |||||||||||||    
T  49363685 ggagaatattgtaaa 49363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 33629971 - 33629918
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  33629971 tttaatccctataaaattttcaatcactacttttggtccttatttttaagtcaa 33629918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 43544989 - 43545039
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  43544989 tttaatccttataaaattttcaatcactacttttggtccctatttttaagt 43545039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 21014820 - 21014714
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttc-aatgaaattttgcaaaaatacgtagaata 217  Q
    |||||||||||||| ||  ||| || |||| |||||||||| ||| ||||||||| |||| | || |||| ||||| ||| |||||||||  ||||||||    
T  21014820 tataaaattttcaatcatcactcttagtccatatttttaagccaagtcatgtgtaaccttggcatttttctaatgatattgtgcaaaaatgtgtagaata 21014721  T
Q  218 ttgtaaa 224  Q
    |||||||    
T  21014720 ttgtaaa 21014714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 31230030 - 31230080
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  31230030 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 31230080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 39329554 - 39329612
Alignment:
Q  160 tcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    |||||||||||||||||||||||| ||||||||| ||| |||| ||||  |||||||||    
T  39329554 tcaaatcatgtgtagcctttgtatttttcaatgacattgtgcacaaatgtgtagaatat 39329612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 16013312 - 16013267
Alignment:
Q  115 tccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  16013312 tccttataaaattttcaatcactacttttggtccctatttttaagt 16013267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 39996280 - 39996325
Alignment:
Q  115 tccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  39996280 tccttataaaattttcaatcactacttttggtccctatttttaagt 39996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 19227714 - 19227762
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  19227714 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 19227762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 31752124 - 31752172
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  31752124 tttagtccctataaaattttcaatcactacttttggtccttatttttaa 31752172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 33806393 - 33806325
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  33806393 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 33806325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 43081560 - 43081457
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatac 209  Q
    |||| ||| |||||||||||||| ||| ||||||||||| ||||||||||| || |           ||||||| ||| ||||||||| ||||||||||     
T  43081560 tttagtccctataaaattttcaatcactacttttggtccctatttttaagttaatt-----------tttgtattttttaatgaaattgtgcaaaaatat 43081472  T
Q  210 gtagaatattgtaaa 224  Q
    |||||||||||||||    
T  43081471 gtagaatattgtaaa 43081457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 44977531 - 44977475
Alignment:
Q  150 tatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaa 206  Q
    |||||||||||||| ||||||||||| ||||||| ||| ||||||||| || |||||    
T  44977531 tatttttaagtcaactcatgtgtagcatttgtattttttaatgaaattgtgtaaaaa 44977475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 46710307 - 46710355
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  46710307 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 46710355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 50743406 - 50743338
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  50743406 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 50743338  T

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Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 10177046 - 10177153
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaat 216  Q
    ||||||||||||| || ||| |||||| | ||||||||||| ||||| ||||| |||   ||||||| ||| ||| ||||| ||||  |||  |||||||    
T  10177046 cttataaaatttttaatcaccacttttagcccttatttttatgtcaactcatgcgtaaattttgtattttttaattaaattgtgcattaatgtgtagaat 10177145  T
Q  217 attgtaaa 224  Q
    ||||||||    
T  10177146 attgtaaa 10177153  T

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Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 154
Target Start/End: Complemental strand, 35571940 - 35571905
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttattt 154  Q
    |||||||||||||||||| |||||||||||||||||    
T  35571940 tataaaattttcaaccactacttttggtccttattt 35571905  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 38098295 - 38098342
Alignment:
Q  177 tttgtatctttcaatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    ||||||||||| ||||||||| |||||||||| ||||||| |||||||    
T  38098295 tttgtatcttttaatgaaattatgcaaaaatatgtagaatgttgtaaa 38098342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 9258720 - 9258770
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| | ||||||||| |||||||||||    
T  9258720 tttagtccttataaaattttcaatcactatttttggtccctatttttaagt 9258770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 16147065 - 16147015
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  16147065 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 16147015  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 18386224 - 18386274
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||||||||||||||  |||||||||||    
T  18386224 tttagtccctataaaattttcaatcacaacttttggtctatatttttaagt 18386274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 21863762 - 21863812
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||| ||||| |||||||||||    
T  21863762 tttagtccttataaaattttcaatcactactttcggtccctatttttaagt 21863812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 23803988 - 23803938
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  23803988 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 23803938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 31310967 - 31311017
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| |||||| ||||||||||||||||    
T  31310967 tttagtccctataaaattttcaatcactacttttagtccttatttttaagt 31311017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 33463347 - 33463397
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  33463347 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 33463397  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 35317237 - 35317287
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  35317237 tttagtccatataaaattttcaatcactacttttggtccctatttttaagt 35317287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 37169724 - 37169774
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  37169724 tttagtccctataaaattttcaaacactacttttggtccctatttttaagt 37169774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 38472626 - 38472576
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| | | ||||||||||| |||||||||||    
T  38472626 tttagtccttataaaattttcaatcgctacttttggtccctatttttaagt 38472576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 41187313 - 41187363
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| ||||||||||||||  || ||||||||||| |||||||||||    
T  41187313 tttaatccctataaaattttcaattactacttttggtccctatttttaagt 41187363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 51762119 - 51762006
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatac 209  Q
    |||||||| ||||||| ||| |  ||| ||||||| ||| |||||||||| ||| ||||||||||| ||||||| |||| || ||||| | || |||| |    
T  51762119 tttaatccctataaaaattttagtcaccacttttgctccgtatttttaagacaa-tcatgtgtagcatttgtatttttctataaaattgtacagaaatgc 51762021  T
Q  210 gtagaatattgtaaa 224  Q
    ||||| | |||||||    
T  51762020 gtagattgttgtaaa 51762006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 53594754 - 53594704
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  53594754 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 53594704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 54533969 - 54533919
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  54533969 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 54533919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 55379169 - 55379119
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  55379169 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 55379119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 18713506 - 18713465
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  18713506 tataaaattttcaatcactacttttggtccctatttttaagt 18713465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 27843019 - 27842974
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||| |||||||||||||||||| ||| ||||||||||| ||||||    
T  27843019 tttagtccttataaaattttcaatcactacttttggtccctatttt 27842974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 31388541 - 31388488
Alignment:
Q  122 aaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagc 175  Q
    ||||||||| | ||| ||||||||||| || ||||||||||| |||||||||||    
T  31388541 aaaattttctatcaccacttttggtccatacttttaagtcaactcatgtgtagc 31388488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 31880181 - 31880140
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  31880181 tataaaattttcaatcactacttttggtccctatttttaagt 31880140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 35558038 - 35558091
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaactttt 143  Q
    |||||||| ||  |||| ||||||||||||||||||||||||| ||| ||||||    
T  35558038 tctaaaattttccttcaacatttaatccttataaaattttcaatcactactttt 35558091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 47360860 - 47360819
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  47360860 tataaaattttcaatcactacttttggtccctatttttaagt 47360819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 49229388 - 49229347
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  49229388 tataaaattttcaatcactacttttggtccctatttttaagt 49229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 6135007 - 6134967
Alignment:
Q  120 ataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  6135007 ataaaattttcaatcactacttttggtccctatttttaagt 6134967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 8399325 - 8399277
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  8399325 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 8399277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 22607173 - 22607221
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  22607173 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 22607221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 26703785 - 26703833
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||| ||||||| ||| ||||||||||| |||||||||    
T  26703785 tttagtccttataaagttttcaatcactacttttggtccctatttttaa 26703833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 30640880 - 30640832
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| || ||||||    
T  30640880 tttagtccttataaaattttcaatcactacttttggtccctacttttaa 30640832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 40629574 - 40629622
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| |||||||||||||| ||| ||||||||||  |||||||||    
T  40629574 tttaatccctataaaattttcaatcactacttttggtctctatttttaa 40629622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 42373372 - 42373420
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  42373372 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 42373420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 43884398 - 43884446
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  43884398 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 43884446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 46006833 - 46006789
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||||||||| ||| ||||||||| | ||||||||||||||    
T  46006833 tataaaattttcaatcactacttttggttcatatttttaagtcaa 46006789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 46962454 - 46962406
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  46962454 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 46962406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 52718450 - 52718498
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  52718450 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 52718498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 54239452 - 54239500
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  54239452 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 54239500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 54338762 - 54338722
Alignment:
Q  123 aaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    ||||||| || ||| ||||||||||||||||||||||||||    
T  54338762 aaatttttaatcactacttttggtccttatttttaagtcaa 54338722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 18282914 - 18282986
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    |||| ||| ||||||||||||||| || ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  18282914 tttagtccctataaaattttcaac-accacttttggtccttatttttaaatcaactcatgtgtaggctttgtat 18282986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 7483213 - 7483283
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| || ||||||| |||| |||||||||| ||||||| ||| ||||||||||| |||||||||||    
T  7483213 tctaaaattttctttcagcttttagtccttataaacttttcaatcactacttttggtccctatttttaagt 7483283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 39025722 - 39025790
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||||||| |||||||||||||| ||| ||||||||||| |||||||||    
T  39025722 tctaaaattttccttcaacatttaatccctataaaattttcaatcactacttttggtccctatttttaa 39025790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 42661419 - 42661467
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  42661419 tttaatccttataaaattttcaatcactacttttggtccctatttttaa 42661467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 3614190 - 3614240
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  3614190 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 3614240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 16425310 - 16425240
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| || ||||| | |||||||| |||||||||||||| ||| | ||||||||| |||||||||||    
T  16425310 tctaaaattttctttcaacttttaatccctataaaattttcaatcactatttttggtccctatttttaagt 16425240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 32618678 - 32618728
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  32618678 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 32618728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 6258234 - 6258189
Alignment:
Q  115 tccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  6258234 tccttataaaattttcaatcactacttttggtccctatttttaagt 6258189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 27581843 - 27581802
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| |||||||||||||||||||||||    
T  27581843 tataaaattttcaatcactacttttggtccttatttttaagt 27581802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 4000930 - 4000878
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtca 162  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||||    
T  4000930 tttagtccctataaaattttcaatcactacttttggtccctatttttaagtca 4000878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 7274985 - 7275053
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  ||||||||||| ||| |||||||||||||| ||| ||||||| ||| |||||||||    
T  7274985 tctaaaattttccttcagcatttagtccctataaaattttcaatcactacttttgatccctatttttaa 7275053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 8596951 - 8596903
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  8596951 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 8596903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 18257338 - 18257270
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| || ||||| | |||| ||| |||||||||||||| ||| ||||||| |||||||||||||    
T  18257338 tctaaaattttctttcaacttttagtccctataaaattttcaatcactacttttgatccttatttttaa 18257270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 23097935 - 23098003
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||| |||| | |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  23097935 tctaaaattttgcttcaacttttagtccctataaaattttcaatcactacttttggtccctatttttaa 23098003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 34728585 - 34728633
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  34728585 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 34728633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 292087 - 292137
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  292087 tttagtccctataaaattttcaatcactacttttggtccatatttttaagt 292137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 8105263 - 8105329
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  8105263 tctaaaattttacttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 8105329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 13408018 - 13408068
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  13408018 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 13408068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 14609609 - 14609559
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  14609609 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 14609559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 24363021 - 24362971
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||||||| |||||| |||| |||||||||||    
T  24363021 tttagtccctataaaattttcaaccactacttttagtccctatttttaagt 24362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 26019895 - 26019961
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  26019895 tctaaaatttttcttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 26019961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 26779829 - 26779779
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||| ||| | ||||||||| |||||||||||    
T  26779829 tttaatccgtataaaattttcaatcactatttttggtccctatttttaagt 26779779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 38732959 - 38732893
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtat 183  Q
    |||||||||||||||| | | |||||| | || |||||||||||||| |||||| || |||||||||    
T  38732959 cttataaaattttcaatcgccacttttagcccctatttttaagtcaactcatgtataacctttgtat 38732893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 8647162 - 8647121
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  8647162 tataaaattttcaatcactacttttggtccctatttttaagt 8647121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 15809504 - 15809388
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttc--aatgaaattttgcaaaaat 207  Q
    |||| ||||||||| ||||||||   | |||||||||||  ||||| ||||||| ||||| |||   ||||||| |||   ||||||||| |||| ||||    
T  15809504 tttagtccttataagattttcaatttccacttttggtcccaattttgaagtcaattcatgagtaatatttgtattttttttaatgaaattatgcagaaat 15809405  T
Q  208 acgtagaatattgtaaa 224  Q
    | |||||||||||||||    
T  15809404 atgtagaatattgtaaa 15809388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 20961334 - 20961407
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||| ||  |||||| |||| ||| ||||||  |||||| ||| ||||||||||| ||||||||||||||    
T  20961334 tctaaaattttccttcagcttttagtccctataaagctttcaatcactacttttggtccctatttttaagtcaa 20961407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 28620793 - 28620752
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  28620793 tataaaattttcaatcactacttttggtccctatttttaagt 28620752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 28838221 - 28838262
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  28838221 tataaaattttcaatcactacttttggtccctatttttaagt 28838262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 38534447 - 38534406
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  38534447 tataaaattttcaatcactacttttggtccctatttttaagt 38534406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 41651166 - 41651207
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  41651166 tataaaattttcaatcactacttttggtccctatttttaagt 41651207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 41960063 - 41960104
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  41960063 cttataaaattttcaatcactacttttggtccctatttttaa 41960104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 4210325 - 4210277
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  4210325 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 4210277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 4591261 - 4591213
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  4591261 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 4591213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 4843498 - 4843450
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  4843498 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 4843450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 7002132 - 7002084
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  7002132 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 7002084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 12331201 - 12331249
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  12331201 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 12331249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 17715380 - 17715332
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||| | |||||||||||||| ||| ||||||||||| |||||||||    
T  17715380 tttaattcctataaaattttcaatcactacttttggtccctatttttaa 17715332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 25564179 - 25564235
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagc 175  Q
    |||||||||||||| ||  ||||||| ||| |||||||||||| | |||||||||||    
T  25564179 tataaaattttcaaacagcacttttgatccatatttttaagtccattcatgtgtagc 25564235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 32065016 - 32065064
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  32065016 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 32065064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 32128923 - 32128875
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  32128923 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 32128875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 39413195 - 39413147
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  39413195 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 39413147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 13574984 - 13574912
Alignment:
Q  118 ttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaa 190  Q
    ||||||||||||||| ||| ||||||  ||| |||||||||||||| ||||||||||| ||||||| ||||||    
T  13574984 ttataaaattttcaatcaccactttttatccatatttttaagtcaattcatgtgtagcatttgtatttttcaa 13574912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 2211771 - 2211833
Alignment:
Q  103 ttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaat 165  Q
    |||| |||||||||| |||||||||||||| ||| ||||||||||| ||||||||||| ||||    
T  2211771 ttcaacatttaatccctataaaattttcaatcactacttttggtccctatttttaagttaaat 2211833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 2288991 - 2288913
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttc 188  Q
    ||||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||| |||||| ||| |||| ||| ||||    
T  2288991 tttaatccttataaatttttcaatcaccactttcggtccctatttttaagtcaactcatgtatagtctttatatttttc 2288913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 9855283 - 9855205
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaatt 197  Q
    |||||||||||||| | | ||||||||||  ||||| |||||||| |||||| |||||||||||| ||| |||||||||    
T  9855283 tataaaattttcaatcgccacttttggtctctatttctaagtcaactcatgtatagcctttgtattttttaatgaaatt 9855205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 6745532 - 6745613
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatatt 219  Q
    ||||||||||| || | ||||||||| ||||||||| | ||| ||| ||| ||||||||| |||||||||| ||||||||||    
T  6745532 acttttggtccatactcttaagtcaactcatgtgtaacatttatatttttgaatgaaattgtgcaaaaatatgtagaatatt 6745613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 11655433 - 11655534
Alignment:
Q  123 aaattttcaaccacaacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattgta 222  Q
    |||||||||| ||| ||||||||||   |||||||||| ||||||||| |||  ||||||| ||||||||||||| |  | ||| | |||||||||||||    
T  11655433 aaattttcaatcaccacttttggtctccatttttaagtaaaatcatgtttagagtttgtatttttcaatgaaattatttagaaaaatgtagaatattgta 11655532  T
Q  223 aa 224  Q
    ||    
T  11655533 aa 11655534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 29266580 - 29266648
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  ||||||||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  29266580 tctaaaattttccttcagcatttagtccctataaaattttcaatcactacttttggtccctatttttaa 29266648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 45434942 - 45434874
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  45434942 tctaaaatgttccttcaacatttagtccctataaaattttcaatcactacttttggtccttatttttaa 45434874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 1770244 - 1770194
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  1770244 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 1770194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 5728755 - 5728805
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  5728755 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 5728805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 9639406 - 9639456
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  9639406 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 9639456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 13124936 - 13124974
Alignment:
Q  122 aaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  13124936 aaaattttcaaccactacttttggtccttatttttaagt 13124974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 33356499 - 33356422
Alignment:
Q  120 ataaaattttcaacca-caacttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaatt 197  Q
    ||||||||||||| || ||| |||||| ||| |||||||||| ||||||||| ||| |||||||||||||||| |||||    
T  33356499 ataaaattttcaatcatcaatttttggccct-atttttaagttaaatcatgtctagtctttgtatctttcaataaaatt 33356422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 15106003 - 15106068
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttt 155  Q
    |||||||| ||  |||| |||||||||| |||||||||||||| ||| | ||||||||||||||||    
T  15106003 tctaaaattttccttcaacatttaatccctataaaattttcaatcactatttttggtccttatttt 15106068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26151554 - 26151481
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||| || ||||| | |||| ||| ||||||||||||||  || |||| |||||||||||||||||||||    
T  26151554 tctaaaatattctttcaacttttagtccatataaaattttcaattaccacttgtggtccttatttttaagtcaa 26151481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 5222840 - 5222800
Alignment:
Q  120 ataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  5222840 ataaaattttcaatcactacttttggtccttatttttaagt 5222800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 12179734 - 12179666
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  12179734 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 12179666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 12424162 - 12424094
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  12424162 tctaaaattttccttcaacatttagtccctataaaattttcaatcactacttttggtccctatttttaa 12424094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 14092933 - 14092865
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| ||| |||| | |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  14092933 tctaaaattttgcttcaacttttagtccctataaaattttcaatcactacttttggtccctatttttaa 14092865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 26533948 - 26533996
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  26533948 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 26533996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 34414921 - 34414873
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  34414921 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 34414873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 1172850 - 1172900
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||  ||||||||||||| ||| ||||||||||| |||||||||||    
T  1172850 tttaatccgaataaaattttcaatcactacttttggtccctatttttaagt 1172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 5325087 - 5325037
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| || ||||||||||| ||| ||||||||||| |||||||||||    
T  5325087 tttaatccctacaaaattttcaatcactacttttggtccctatttttaagt 5325037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 6655838 - 6655920
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgc-aaaaatacgtagaatatt 219  Q
    ||||||||||| || | ||||||||| ||||||||| | ||| ||| ||| ||||||||| ||| ||||||| ||||||||||    
T  6655838 acttttggtccatactcttaagtcaactcatgtgtaacatttatatttttgaatgaaattgtgcaaaaaatatgtagaatatt 6655920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 6736240 - 6736322
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgc-aaaaatacgtagaatatt 219  Q
    ||||||||||| || | ||||||||| ||||||||| | ||| ||| ||| ||||||||| ||| ||||||| ||||||||||    
T  6736240 acttttggtccatactcttaagtcaactcatgtgtaacatttatatttttgaatgaaattgtgcaaaaaatatgtagaatatt 6736322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 9655877 - 9655827
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  9655877 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 9655827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 11127430 - 11127380
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| |||||||||||||| ||| ||||||||||  |||||||||||    
T  11127430 tttaatccctataaaattttcaatcactacttttggtctatatttttaagt 11127380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 11148381 - 11148331
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||| ||||||| ||| |||||||||||||||||||||||    
T  11148381 tttagtccctataaatttttcaatcactacttttggtccttatttttaagt 11148331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 11735636 - 11735570
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttattttt 156  Q
    |||||||| ||  |||| |||||| ||| |||||||||||||| ||| ||||||||||| |||||||    
T  11735636 tctaaaatttttcttcaacatttagtccctataaaattttcaatcactacttttggtccctattttt 11735570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 12667040 - 12666990
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||||||  ||||||||||| |||||||||||    
T  12667040 tttagtccctataaaattttcaaccattacttttggtccctatttttaagt 12666990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 14438894 - 14438944
Alignment:
Q  108 catttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||||| |||||||||||||| | | ||||| |||||||||||||||    
T  14438894 catttaatccctataaaattttcaatcgctactttcggtccttatttttaa 14438944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 18558424 - 18558374
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  18558424 tttagtccctataaaattttcaatcaccacttttggtccctatttttaagt 18558374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 22270423 - 22270473
Alignment:
Q  108 catttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  22270423 catttagtccctataaaattttcaatcactacttttggtccctatttttaa 22270473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 23763114 - 23763184
Alignment:
Q  154 tttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattgtaaa 224  Q
    |||||||||| | |||| |||||||||||| ||| ||||||||| |||| |||||  ||||||||| ||||    
T  23763114 tttaagtcaactaatgtttagcctttgtattttttaatgaaattgtgcataaatatttagaatattataaa 23763184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 24863662 - 24863616
Alignment:
Q  117 cttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||||||||||||||| || || ||||| ||||||||||||||||||    
T  24863662 cttataaaattttcaatcataagttttgatccttatttttaagtcaa 24863616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 25686995 - 25686945
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  25686995 tttagtccctataaaattttcaatcactacttttggtccatatttttaagt 25686945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 35034744 - 35034794
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  35034744 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 35034794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 40668844 - 40668802
Alignment:
Q  118 ttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||    
T  40668844 ttataaaattttcaatcactacttttgatccttatttttaagt 40668802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 42148866 - 42148816
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||||    
T  42148866 tttagtccctataaaattttcaatcactacttttggtccctatttttaagt 42148816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 44060921 - 44060871
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| ||||| |||||||| ||| ||||||||||| |||||||||||    
T  44060921 tttaatccctataacattttcaatcactacttttggtccctatttttaagt 44060871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 5889349 - 5889398
Alignment:
Q  114 atccttataaaattttcaaccacaacttttggtccttatttttaagtcaa 163  Q
    |||| |||||||||||||| ||| ||||||||||| |||||| |||||||    
T  5889349 atccgtataaaattttcaatcactacttttggtccctattttcaagtcaa 5889398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 11170130 - 11170089
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| | |||||||||||||||||||||    
T  11170130 tataaaattttcaatcactaattttggtccttatttttaagt 11170089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 18173491 - 18173442
Alignment:
Q  109 atttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    ||||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  18173491 atttagtccctataaaattttcaatcactacttttggtccctatttttaa 18173442  T

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Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 22438051 - 22438135
Alignment:
Q  138 acttttggtccttatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatattgtaa 223  Q
    ||||||| |||||| |||||||||||||| | |||||||||  ||| ||| ||| |||||||||| |||||  || ||||||||||    
T  22438051 acttttgctccttacttttaagtcaaatcttatgtagccttcatat-ttttaataaaattttgcagaaatatttaaaatattgtaa 22438135  T

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Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 45510039 - 45509998
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  45510039 tataaaattttcaatcactacttttggtccatatttttaagt 45509998  T

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Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 3613141 - 3613093
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| |||||||||||||| ||  ||||||||||| |||||||||    
T  3613141 tttaatccctataaaattttcaatcagtacttttggtccctatttttaa 3613093  T

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Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 4586319 - 4586367
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| | |||| ||||||||||||||    
T  4586319 tttagtccttataaaattttcaatcactattttttgtccttatttttaa 4586367  T

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Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 6079351 - 6079303
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| |||||||||||||| ||| ||||||||| | |||||||||    
T  6079351 tttaatccctataaaattttcaatcactacttttggttcctatttttaa 6079303  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 7016927 - 7016879
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  7016927 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 7016879  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 18150727 - 18150679
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  18150727 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 18150679  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 23130131 - 23130083
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  23130131 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 23130083  T

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Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 28525568 - 28525616
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  28525568 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 28525616  T

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Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 32800169 - 32800121
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  32800169 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 32800121  T

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Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 35161010 - 35160962
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||| | |||||||||    
T  35161010 tttagtccttataaaattttcaatcaccacttttggtacctatttttaa 35160962  T

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Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 35278990 - 35279038
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||||||| |||||||||||||| ||| |||||| |||| |||||||||    
T  35278990 tttaatccctataaaattttcaatcaccacttttagtccctatttttaa 35279038  T

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Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 35574959 - 35575007
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  35574959 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 35575007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 35778640 - 35778592
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  35778640 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 35778592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 36091349 - 36091397
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  36091349 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 36091397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 36126771 - 36126819
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  36126771 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 36126819  T

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Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 36310565 - 36310613
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  36310565 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 36310613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 42026231 - 42026183
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| ||| |||||||||||||| ||| ||||||||||| |||||||||    
T  42026231 tttagtccctataaaattttcaatcactacttttggtccctatttttaa 42026183  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 74098 - 74030
Alignment:
Q  150 tatttttaagtcaaatcatgtgtagcctttgtatctttcaatgaaattttgcaaaaatacgtagaatat 218  Q
    |||||||||||||| ||||||||||||||||||  ||| ||| ||||| |||| ||||| |||||||||    
T  74098 tatttttaagtcaactcatgtgtagcctttgtaatttttaattaaattgtgcataaatatgtagaatat 74030  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 37315 - 37265
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  37315 tttagtccttataaaattttcaatcactacttttggtccctatttttaagt 37265  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 28157 - 28205
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| ||||||||||| |||||||||    
T  28157 tttagtccttataaaattttcaatcactacttttggtccctatttttaa 28205  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 197380 - 197431
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagtcaaatcatgt 170  Q
    |||||||||||||  ||| |||||||||||||||||||||| ||| ||||||    
T  197380 tataaaattttcagtcaccacttttggtccttatttttaagccaactcatgt 197431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 10357 - 10427
Alignment:
Q  90 tctaaaatcttgtttcagcatttaatccttataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||| || ||||| | |||| ||| | |||||||||||| ||| ||||||||||| |||||||||||    
T  10357 tctaaaattttctttcaacttttagtccctgtaaaattttcaatcactacttttggtccctatttttaagt 10427  T

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Target: scaffold0197 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 4203 - 4162
Alignment:
Q  119 tataaaattttcaaccacaacttttggtccttatttttaagt 160  Q
    |||||||||||||| ||| ||||||||||| |||||||||||    
T  4203 tataaaattttcaaacactacttttggtccctatttttaagt 4162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 47689 - 47737
Alignment:
Q  110 tttaatccttataaaattttcaaccacaacttttggtccttatttttaa 158  Q
    |||| |||||||||||||||||| ||| |||||| |||| |||||||||    
T  47689 tttagtccttataaaattttcaatcactacttttagtccctatttttaa 47737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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