View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1641-INSERTION-1 (Length: 202)
Name: NF1641-INSERTION-1
Description: NF1641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1641-INSERTION-1 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 18715182 - 18714989
Alignment:
| Q |
11 |
accacctcatcagttttctaataaaaatgaagaaaaaacataaagagataaacttgtgcgtgtttgtaat-ataaaagacgcacatgagaaaaaagaatg |
109 |
Q |
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| T |
18715182 |
accacctcatcagttttctaataaaaatgaagaaaaaacataaagagataaacttgtgcgtgtttgtaatgataaaagacacacatgagaaaaaagaatg |
18715083 |
T |
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| Q |
110 |
ataaatgacaatctaatataattaaataacataaaggaccattgaattaaaaagaatgatacatttgtttgga-ttatcagtggttggatggta |
202 |
Q |
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| T |
18715082 |
ataaaagacaatctaatataattaaataacataaaggaccattgaattaaaaagaatgatacatttgtttggactgatcagtggttggatggta |
18714989 |
T |
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